RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCTD17 (Homo sapiens)

Ensembl gene IDs: ENSG00000100379

Ensembl transcript IDs: ENST00000402077.7, ENST00000403888.7, ENST00000421900.5, ENST00000431531.1, ENST00000456470.1, ENST00000462640.1, ENST00000478231.5, ENST00000483389.5, ENST00000610767.4

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTaGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCC +
Preference number: 1 (lower is better)
Translates to: EKQGPIPGSQTQEGP*LSRHTHSPRAVPES
Trigger: GGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR GCA 90 bp GGGACGCAGGTGCCGGAGAGACACAGCCAGACATTGCCACACATCTaGCATGAGCAGTCCACTCTGCCCAGAGGTCCTGGGGCCCACCTT +
Preference number: 1 (lower is better)
Translates to: GTQVPERHSQTLPHI*HEQSTLPRGPGAHL
Trigger: AAGGTGGGCCCCAGGACCTCTGGGCAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGTCTGGCTGTGTCTCTCCGGCACCTGCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR TCA 90 bp TCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTaGGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCACAACAA +
Preference number: 1 (lower is better)
Translates to: SHPRAAEGGRPLYTA*GPSGTLLLCAPSQQ
Trigger: TTGTTGTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR CCA 90 bp CTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTaGGTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTAT +
Preference number: 1 (lower is better)
Translates to: LNLHLQTQCYAQGSG*VLPIPGQLKVGGPY
Trigger: ATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR TCA 90 bp GGGCTGTTCCTTTGGGTTTTATTACATGGTGGGGTCGGACACAGCTaGGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCC +
Preference number: 1 (lower is better)
Translates to: GLFLWVLLHGGVGHS*EARTHPGKSNTGGP
Trigger: GGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCCACCATGTAATAAAACCCAAAGGAACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
3UTR-3UTR TCA 90 bp CGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGCCCAGCCATCCCAGGGCAGCTaGAGGTGGGCGGCCCCTATA +
Preference number: 2 (lower is better)
Translates to: RHTHSPRAVPESSTAPAQPSQGS*RWAAPI
Trigger: TATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGG...CTGGGCAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCATCCCAGGGCAGCTaGAGGTGGGCGGCCCCTATA +
Preference number: 2 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPPSQGS*RWAAPI
Trigger: TATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGG...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp AGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTTCACAGCCCCACGGGTaGAGACAGAGGAGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: RKEHIHHAAGEPGRGDAGSQPHG*RQRRPG
Trigger: CCCCGGCCTCCTCTGTCTGCACCCGTGGGGCTGTGA...ACCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCAGGAGCACATCCACCATaGAGCAGGGGAGCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPGAHPP*SRGARE
Trigger: CTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCC...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGCCCAGGCGGCCCCTATATACTaGCTGAGGGCCTTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: RHTHSPRAVPESSTAPAQAAPIY*LRAFRD
Trigger: GTCCCTGAAGGCCCTCAGGCAGTATATAGGGGCCGC...CTGGGCAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp TCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGCTCACAACAACCCTGTaGGGTAGGTGGGGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SAAIPTLPGQFLSPPPPLLTTTL*GRWGGR
Trigger: CCTCCCACCCCACCTACCTCACAGGGTTGTTGTGAG...CAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp AGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTTCCTGGGGCCCACCTTaGGCCTTAAGAGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: RKEHIHHAAGEPGRGDAGSWGPP*ALRGPR
Trigger: CCTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGA...ACCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACACAGGAGGGCCCCTaGCTCAGCCGCCATACCCAC +
Preference number: 2 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHTQEGP*LSRHTH
Trigger: GTGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGT...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp GCCAGACATTGCCACACATCTGCCATGAGCAGTCCACTCTGCCCAGAGGTCCTGCAGGGATGGCAGCTCTaGGGGCGGGCGAGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: ARHCHTSAMSSPLCPEVLQGWQL*GRARGR
Trigger: TCGGCCCCTCGCCCGCCCCCAGAGCTGCCATCCCTG...CAGGACCTCTGGGCAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456470.1
3UTR-3UTR TCA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCCTCACAACAACCCTGTaGGGTAGGTGGGGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTLTTTL*GRWGGR
Trigger: CCTCCCACCCCACCTACCTCACAGGGTTGTTGTGAG...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp CAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCCCATCCCAGGGCAGCTaGAGGTGGGCGGCCCCTATA +
Preference number: 2 (lower is better)
Translates to: QLRSKDPSREVKHRRAPGPSQGS*RWAAPI
Trigger: TATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGG...GCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCAGGCCGGGGAGAGGGTaGTTCTTCCTTCTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: LPIPGQLKVGGPYILPEGRPGRG*FFLLRP
Trigger: GGGCCTGAGAAGGAAGAAGCACCCTCTCCCCGGCCT...GCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCCTTAGGCCGGGGAGAGGGTaGTTCTTCCTTCTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: PIPGQLKVGGPYILPEGLRPGRG*FFLLRP
Trigger: GGGCCTGAGAAGGAAGAAGCACCCTCTCCCCGGCCT...AAGGCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATTCCTGGGGCCCACCTTaGGCCTTAAGAGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHSWGPP*ALRGPR
Trigger: CCTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGA...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp CCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCCTTCTCAAGGAGGCAATGTaGCCGGGCCAGGAAGGAGCA +
Preference number: 2 (lower is better)
Translates to: PIPGQLKVGGPYILPEGLLKEAM*PGQEGA
Trigger: TGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAG...AAGGCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp GGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCTCAAGGAGGCAATGTaGCCGGGCCAGGAAGGAGCA +
Preference number: 2 (lower is better)
Translates to: GVGGVTPWTKAQGGNVTGLKEAM*PGQEGA
Trigger: TGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAG...CCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCAGGCCGGGGAGAGGGTaGTTCTTCCTTCTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: QLRSKDPSREVKHRRAPGRPGRG*FFLLRP
Trigger: GGGCCTGAGAAGGAAGAAGCACCCTCTCCCCGGCCT...GCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp GGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGTCCCTGGAGGTGATCTaGGGCCTCACATCCGGGTGC +
Preference number: 2 (lower is better)
Translates to: GVTPWTKAQGGNVTGPGRSLEVI*GLTSGC
Trigger: GCACCCGGATGTGAGGCCCCAGATCACCTCCAGGGA...CCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456470.1
3UTR-3UTR TCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCGTGGGGTGGGAGGAGTaGCCCCCTGGACTAAGGCTC +
Preference number: 2 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPVGWEE*PPGLRL
Trigger: GAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCAC...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCGGAGCACATCCACCATaGAGCAGGGGAGCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPGAHPP*SRGARE
Trigger: CTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCC...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp TCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGGACTTTGCTCCTCTGTaGACCCTCACAACAACCCTG +
Preference number: 2 (lower is better)
Translates to: SAAIPTLPGQFLSPPPPLDFAPL*TLTTTL
Trigger: CAGGGTTGTTGTGAGGGTGCACAGAGGAGCAAAGTC...CAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp GGCTGGGTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGGGCCTTCAGGGACTTTaGTCCTCTGTGCACCCTCAC +
Preference number: 2 (lower is better)
Translates to: GWVLPIPGQLKVGGPYILGLQGL*SSVHPH
Trigger: GTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCC...CAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGACCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCGCAAACACAGTGTTATaGCCAGGGGTCGGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: LPIPGQLKVGGPYILPEGANTVL*PGVGLG
Trigger: ACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGC...GCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATGGCCTCACATCCGGGTaGCTCTGGCTTGTAACAGCA +
Preference number: 2 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHGLTSG*LWLVTA
Trigger: TGCTGTTACAAGCCAGAGGCACCCGGATGTGAGGCC...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456470.1
3UTR-3UTR CCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAATCCTGGGGCCCACCTTaGGCCTTAAGAGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQSWGPP*ALRGPR
Trigger: CCTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGA...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp TGGTGGGGTCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACACACAGGAGGGCCCCTaGCTCAGCCGCCATACCCAC +
Preference number: 2 (lower is better)
Translates to: WWGRTQLRSKDPSREVKHTQEGP*LSRHTH
Trigger: GTGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGT...GTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCACATCCGGGTGCCTCTaGCTTGTAACAGCAGGGATG +
Preference number: 2 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTTSGCL*LVTAGM
Trigger: CATCCCTGCTGTTACAAGCCAGAGGCACCCGGATGT...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456470.1
3UTR-3UTR TCA 90 bp ACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAAGGAGGCAATGTaGCCGGGCCAGGAAGGAGCA +
Preference number: 2 (lower is better)
Translates to: TAEKQGPIPGSQTQEGPWLKEAM*PGQEGA
Trigger: TGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAG...CCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp CATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCAGTGGGGTGGGAGGAGTaGCCCCCTGGACTAAGGCTC +
Preference number: 2 (lower is better)
Translates to: HLQTQCYAQGSGWVLPIPVGWEE*PPGLRL
Trigger: GAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCAC...TGGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATCCCCTATATACTGCCTaGGGGCCTTCAGGGACTTTG +
Preference number: 2 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHPLYTA*GPSGTL
Trigger: CAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGG...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCCCAAGTCCCTGGAGGTaGTCTGGGGCCTCACATCCG +
Preference number: 2 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLPSPWR*SGASHP
Trigger: CGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGG...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456470.1
3UTR-3UTR GCA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCAACATTGCCACACATCTaGCATGAGCAGTCCACTCTG +
Preference number: 2 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPTLPHI*HEQSTL
Trigger: CAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGT...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCGGCCTTCAGGGACTTTaGTCCTCTGTGCACCCTCAC +
Preference number: 2 (lower is better)
Translates to: QLRSKDPSREVKHRRAPGGLQGL*SSVHPH
Trigger: GTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCC...GCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCTCCTGGGGCCCACCTTaGGCCTTAAGAGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLSWGPP*ALRGPR
Trigger: CCTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGA...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp TCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGAGCAATGCAAATGGCTaGGGGTGGGATCACCAAAGA +
Preference number: 2 (lower is better)
Translates to: SAAIPTLPGQFLSPPPPLSNANG*GWDHQR
Trigger: TCTTTGGTGATCCCACCCCCAGCCATTTGCATTGCT...CAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCACAGGAGCACATCCACCATaGAGCAGGGGAGCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: PIYCLRAFRDFAPLCTLTGAHPP*SRGARE
Trigger: CTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCC...TGTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCGCGGCCCCTATATACTaGCTGAGGGCCTTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPAAPIY*LRAFRD
Trigger: GTCCCTGAAGGCCCTCAGGCAGTATATAGGGGCCGC...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp CAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGCCCAGGGGTCGGGCTaGGTCCTTCCCATCCCAGGG +
Preference number: 2 (lower is better)
Translates to: QYLNLHLQTQCYAQGSGWAQGSG*VLPIPG
Trigger: CCCTGGGATGGGAAGGACCCAGCCCGACCCCTGGGC...CCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCGGCCTTCAGGGACTTTaGTCCTCTGTGCACCCTCAC +
Preference number: 2 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLGLQGL*SSVHPH
Trigger: GTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCC...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCAGCGGCCCCTATATACTaGCTGAGGGCCTTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: HLQTQCYAQGSGWVLPIPAAPIY*LRAFRD
Trigger: GTCCCTGAAGGCCCTCAGGCAGTATATAGGGGCCGC...TGGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp CCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTCTCACAACAACCCTGTaGGGTAGGTGGGGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: PESPFANTVLCPGVGLGPLTTTL*GRWGGR
Trigger: CCTCCCACCCCACCTACCTCACAGGGTTGTTGTGAG...AGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCCCCCTATATACTGCCTaGGGGCCTTCAGGGACTTTG +
Preference number: 2 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPPLYTA*GPSGTL
Trigger: CAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGG...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCTGCATCCCCAATACCTaGATCTCCATTTGCAAACAC +
Preference number: 2 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTCIPNT*ISICKH
Trigger: GTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCA...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATTTGGGTTTTATTACATaGTGGGGTCGGACACAGCTG +
Preference number: 2 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHLGFIT*WGRTQL
Trigger: CAGCTGTGTCCGACCCCACCATGTAATAAAACCCAA...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
3UTR-3UTR TCA 90 bp TCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCCCCTATATACTGCCTaGGGGCCTTCAGGGACTTTG +
Preference number: 2 (lower is better)
Translates to: SICKHSVMPRGRAGSFPSPLYTA*GPSGTL
Trigger: CAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGG...GGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATTGCATCCCCAATACCTaGATCTCCATTTGCAAACAC +
Preference number: 2 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHCIPNT*ISICKH
Trigger: GTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCA...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACAAGGCCGGGGAGAGGGTaGTTCTTCCTTCTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: ASSPQPASPIPESPFANTRPGRG*FFLLRP
Trigger: GGGCCTGAGAAGGAAGAAGCACCCTCTCCCCGGCCT...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp ACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGACATTGCCACACATCTaGCATGAGCAGTCCACTCTG +
Preference number: 2 (lower is better)
Translates to: TAEKQGPIPGSQTQEGPWTLPHI*HEQSTL
Trigger: CAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGT...CCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAACATTGCCACACATCTaGCATGAGCAGTCCACTCTG +
Preference number: 2 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQTLPHI*HEQSTL
Trigger: CAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGT...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp CAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGCTCACAACAACCCTGTaGGGTAGGTGGGGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: QYLNLHLQTQCYAQGSGWLTTTL*GRWGGR
Trigger: CCTCCCACCCCACCTACCTCACAGGGTTGTTGTGAG...CCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR TCA 90 bp CAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTGCATCCCCAATACCTaGATCTCCATTTGCAAACAC +
Preference number: 2 (lower is better)
Translates to: QLRSKDPSREVKHRRAPGCIPNT*ISICKH
Trigger: GTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCA...GCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCACATTGCCACACATCTaGCATGAGCAGTCCACTCTG +
Preference number: 2 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPTLPHI*HEQSTL
Trigger: CAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGT...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp TCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCGACTTTGCTCCTCTGTaGACCCTCACAACAACCCTG +
Preference number: 2 (lower is better)
Translates to: SICKHSVMPRGRAGSFPSDFAPL*TLTTTL
Trigger: CAGGGTTGTTGTGAGGGTGCACAGAGGAGCAAAGTC...GGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAATAAAGGATTTCAGATaGGAACCCCAAGTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQIKDFR*EPQVPG
Trigger: TCCAGGGACTTGGGGTTCCCATCTGAAATCCTTTAT...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR GCA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACAGACTTTGCTCCTCTGTaGACCCTCACAACAACCCTG +
Preference number: 2 (lower is better)
Translates to: ASSPQPASPIPESPFANTDFAPL*TLTTTL
Trigger: CAGGGTTGTTGTGAGGGTGCACAGAGGAGCAAAGTC...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CCA 90 bp CCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTATAAAGGATTTCAGATaGGAACCCCAAGTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: PESPFANTVLCPGVGLGPIKDFR*EPQVPG
Trigger: TCCAGGGACTTGGGGTTCCCATCTGAAATCCTTTAT...AGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456470.1
ENST00000610767.4
3UTR CCA 72 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTaGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTT +
Preference number: 3 (lower is better)
Translates to: GPIPGSQTQEGP*LSRHTHSPRAV
Trigger: AACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR CCA 72 bp CCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTaGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCA +
Preference number: 3 (lower is better)
Translates to: PCEVGGVGGVTP*TKAQGGNVTGP
Trigger: TGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CAA 90 bp TCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCGTCCTGGGGCCCACCTaGGGCCTTAAGAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: SDTAEKQGPIPGSQTQEGVLGPT*GLKRSQ
Trigger: CTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGAC...GCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CAA 90 bp TGGTGGGGTCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACGTCCTGGGGCCCACCTaGGGCCTTAAGAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: WWGRTQLRSKDPSREVKHVLGPT*GLKRSQ
Trigger: CTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGAC...GTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CAA 90 bp TGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCGGGCCTTCAGGGACTTaGCTCCTCTGTGCACCCTCA +
Preference number: 3 (lower is better)
Translates to: CEVGGVGGVTPWTKAQGGGPSGT*LLCAPS
Trigger: TGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCC...GCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR TCA 72 bp AGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTaGGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCC +
Preference number: 3 (lower is better)
Translates to: RAAEGGRPLYTA*GPSGTLLLCAP
Trigger: GGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR GCA 72 bp GTGCCGGAGAGACACAGCCAGACATTGCCACACATCTaGCATGAGCAGTCCACTCTGCCCAGAGGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: VPERHSQTLPHI*HEQSTLPRGPG
Trigger: CCCAGGACCTCTGGGCAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGTCTGGCTGTGTCTCTCCGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR GCA 72 bp AAGTCCCTGGAGGTGATCTGGGGCCTCACATCCGGGTaGCTCTGGCTTGTAACAGCAGGGATGGCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: KSLEVIWGLTSG*LWLVTAGMAAL
Trigger: CAGAGCTGCCATCCCTGCTGTTACAAGCCAGAGGCACCCGGATGTGAGGCCCCAGATCACCTCCAGGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456470.1
3UTR-3UTR CAA 90 bp CCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCACAGTCCTGGGGCCCACCTaGGGCCTTAAGAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: PIYCLRAFRDFAPLCTLTVLGPT*GLKRSQ
Trigger: CTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGAC...TGTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CAA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACAGTCCTGGGGCCCACCTaGGGCCTTAAGAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: ASSPQPASPIPESPFANTVLGPT*GLKRSQ
Trigger: CTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGAC...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR-3UTR CAA 90 bp CCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCTACCTGAATCTCCATTaGCAAACACAGTGTTATGCC +
Preference number: 3 (lower is better)
Translates to: PWLSRHTHSPRAVPESSTYLNLH*QTQCYA
Trigger: GGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA...GGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR TCA 72 bp AAAGGATTTCAGATGGGAACCCCAAGTCCCTGGAGGTaGTCTGGGGCCTCACATCCGGGTGCCTCTGGCTTG +
Preference number: 3 (lower is better)
Translates to: KGFQMGTPSPWR*SGASHPGASGL
Trigger: CAAGCCAGAGGCACCCGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGGGGTTCCCATCTGAAATCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456470.1
3UTR CCA 72 bp ATTTCAGATGGGAACCCCAAGTCCCTGGAGGTGATCTaGGGCCTCACATCCGGGTGCCTCTGGCTTGTAACA +
Preference number: 3 (lower is better)
Translates to: ISDGNPKSLEVI*GLTSGCLWLVT
Trigger: TGTTACAAGCCAGAGGCACCCGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGGGGTTCCCATCTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456470.1
3UTR GCA 72 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATaGCCAGGGGTCGGGCTGGGTCCTTCCCATCCCAGG +
Preference number: 3 (lower is better)
Translates to: PIPESPFANTVL*PGVGLGPSHPR
Trigger: CCTGGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR TCA 72 bp CCAGGCCAGCTCCCCACAACCTGCATCCCCAATACCTaGATCTCCATTTGCAAACACAGTGTTATGCCCAGG +
Preference number: 3 (lower is better)
Translates to: PGQLPTTCIPNT*ISICKHSVMPR
Trigger: CCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
3UTR TCA 72 bp CTTTGGGTTTTATTACATGGTGGGGTCGGACACAGCTaGGAAGCAAGGACCCATCCCGGGAAGTCAAACACA +
Preference number: 3 (lower is better)
Translates to: LWVLLHGGVGHS*EARTHPGKSNT
Trigger: TGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCCACCATGTAATAAAACCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
3UTR-3UTR CAA 90 bp TACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCTACCTGAATCTCCATTaGCAAACACAGTGTTATGCC +
Preference number: 3 (lower is better)
Translates to: YLNLHLQTQCYAQGSGWVYLNLH*QTQCYA
Trigger: GGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA...GACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp GGCTGGGTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCAGGGATGGCAGCTCTaGGGGCGGGCGAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GWVLPIPGQLKVGGPYILQGWQL*GRARGR
Trigger: TCGGCCCCTCGCCCGCCCCCAGAGCTGCCATCCCTG...CAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGACCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR TCA 90 bp TCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGGCTCAGCCTCAGGTCTaGGAGGGTGCGGACGGGAAC +
Preference number: 4 (lower is better)
Translates to: SAAIPTLPGQFLSPPPPLAQPQV*EGADGN
Trigger: GTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGC...CAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR TCA 90 bp CCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCCCATCCCAGGGCAGCTaGAGGTGGGCGGCCCCTATA +
Preference number: 4 (lower is better)
Translates to: PWLSRHTHSPRAVPESSTPSQGS*RWAAPI
Trigger: TATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGG...GGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTGCCGGAGGGGTCGGACACAGCTaGGAAGCAAGGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: EHIHHAAGEPGRGDAGAGGVGHS*EARTHP
Trigger: GGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCC...TCCGGCACCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp TCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGTCGCGGCACAGCGTCTaGCGGGTGGTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: SAAIPTLPGQFLSPPPPLSRHSV*RVVRNT
Trigger: GGTGTTCCTGACCACCCGGCAGACGCTGTGCCGCGA...CAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR GCA 90 bp CCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGGAGCACATCCACCATaGAGCAGGGGAGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PWLSRHTHSPRAVPESSTGAHPP*SRGARE
Trigger: CTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCC...GGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp GGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGCAGGGATGGCAGCTCTaGGGGCGGGCGAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GVTPWTKAQGGNVTGPGRQGWQL*GRARGR
Trigger: TCGGCCCCTCGCCCGCCCCCAGAGCTGCCATCCCTG...CCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR CCA 90 bp GTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGCAGGGATGGCAGCTCTaGGGGCGGGCGAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: VLPIPGQLKVGGPYILPEQGWQL*GRARGR
Trigger: TCGGCCCCTCGCCCGCCCCCAGAGCTGCCATCCCTG...CTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR CCA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCAACACAGGAGGGCCCCTaGCTCAGCCGCCATACCCAC +
Preference number: 4 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPTQEGP*LSRHTH
Trigger: GTGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGT...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp AGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTCCTGGCACAGGCGGCTaGGGAAGGACTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RKEHIHHAAGEPGRGDAGPGTGG*GRTSAR
Trigger: GCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGG...ACCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CAGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGCCAAGTCCCTGGAGGTaGTCTGGGGCCTCACATCCG +
Preference number: 4 (lower is better)
Translates to: QEGAHPPCSRGARERGRRPSPWR*SGASHP
Trigger: CGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGG...CCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCCCAAGTCCCTGGAGGTaGTCTGGGGCCTCACATCCG +
Preference number: 4 (lower is better)
Translates to: PWLSRHTHSPRAVPESSTPSPWR*SGASHP
Trigger: CGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGG...GGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CAGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGGGGGTCGGACACAGCTaGGAAGCAAGGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: QEGAHPPCSRGARERGRRGVGHS*EARTHP
Trigger: GGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCC...CCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CAGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTCATCCCGGTCCGACTaGAGCTCTTCCCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QEGAHPPCSRGARERGRRSSRSD*SSSPWH
Trigger: GTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGA...CCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCAAGGCCGGGGAGAGGGTaGTTCTTCCTTCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPRPGRG*FFLLRP
Trigger: GGGCCTGAGAAGGAAGAAGCACCCTCTCCCCGGCCT...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCTCACAGCCCCACGGGTaGAGACAGAGGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LPIPGQLKVGGPYILPEGSQPHG*RQRRPG
Trigger: CCCCGGCCTCCTCTGTCTGCACCCGTGGGGCTGTGA...GCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATTCACAGCCCCACGGGTaGAGACAGAGGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHSQPHG*RQRRPG
Trigger: CCCCGGCCTCCTCTGTCTGCACCCGTGGGGCTGTGA...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CAGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTCCTGGGGCCCACCTTaGGCCTTAAGAGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QEGAHPPCSRGARERGRRSWGPP*ALRGPR
Trigger: CCTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGA...CCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp GTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGCCCAGGGGTCGGGCTaGGTCCTTCCCATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VLPIPGQLKVGGPYILPEAQGSG*VLPIPG
Trigger: CCCTGGGATGGGAAGGACCCAGCCCGACCCCTGGGC...CTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCTTTGCGGCTGGACTCTaGGCTCAGCCCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PWLSRHTHSPRAVPESSTFAAGL*AQPVWG
Trigger: ACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAA...GGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGTCGCGGCACAGCGTCTaGCGGGTGGTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: GVGGVTPWTKAQGGNVTGSRHSV*RVVRNT
Trigger: GGTGTTCCTGACCACCCGGCAGACGCTGTGCCGCGA...CCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR GCA 90 bp CCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCCTGCCTGGTCCTCGCTaGCGTAGTTGTAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PWLSRHTHSPRAVPESSTLPGPR*RSCRRS
Trigger: GCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAG...GGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGCCCAGCACACACAGGAACTCTaGCTGGTCCTCGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: RHTHSPRAVPESSTAPAQHTQEL*LVLAAV
Trigger: TACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTG...CTGGGCAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTGCCGGATCAGCCCGTTTGGGGTaGTGTGGAGCTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: EHIHHAAGEPGRGDAGAGSARLG*CGAPWT
Trigger: TGTCCAAGGAGCTCCACAGCACCCCAAACGGGCTGA...TCCGGCACCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGCCCAGTGCTGCTCCTCCAGCTaGTCCTCCGTGCTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RHTHSPRAVPESSTAPAQCCSSS*SSVLLV
Trigger: AACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCA...CTGGGCAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR GCA 90 bp ACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCCAGGAGCACATCCACCATaGAGCAGGGGAGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: THPGKSNTGGPLAQPPYPGAHPP*SRGARE
Trigger: CTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCC...TGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCGGAGCACATCCACCATaGAGCAGGGGAGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LPIPGQLKVGGPYILPEGGAHPP*SRGARE
Trigger: CTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCC...GCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGCCCAGGGCCTTCAGGGACTTTaGTCCTCTGTGCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: RHTHSPRAVPESSTAPAQGLQGL*SSVHPH
Trigger: GTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCC...CTGGGCAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCTCCTGGGGCCCACCTTaGGCCTTAAGAGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTSWGPP*ALRGPR
Trigger: CCTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGA...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGCCTGGCACAGGCGGCTaGGGAAGGACTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: VLPIPGQLKVGGPYILPEPGTGG*GRTSAR
Trigger: GCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGG...CTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp TCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGTGGGTGGGACCTGGGTaGCCGTGTAGTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SAAIPTLPGQFLSPPPPLWVGPG*PCSPSL
Trigger: AAGAGAAGGACTACACGGTCACCCAGGTCCCACCCA...CAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCTCATCCCGGTCCGACTaGAGCTCTTCCCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LPIPGQLKVGGPYILPEGSSRSD*SSSPWH
Trigger: GTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGA...GCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCCTGCCTGGTCCTCGCTaGCGTAGTTGTAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTLPGPR*RSCRRS
Trigger: GCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAG...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCAGGCCTTCAGGGACTTTaGTCCTCTGTGCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPGLQGL*SSVHPH
Trigger: GTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCC...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGGCGCTGGGCCAGCAATaGAAATGGCTGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GVGGVTPWTKAQGGNVTGALGQQ*KWLGVG
Trigger: TCCCACCCCCAGCCATTTGCATTGCTGGCCCAGCGC...CCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp GGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGACAGCGTCTGCCGGGTaGTCAGGAACACCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GVTPWTKAQGGNVTGPGRTASAG*SGTPCP
Trigger: GGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT...CCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR TCA 90 bp ACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCCTGGCACAGGCGGCTaGGGAAGGACTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: TAEKQGPIPGSQTQEGPWPGTGG*GRTSAR
Trigger: GCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGG...CCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GGCTGGGTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGTTTGCGGCTGGACTCTaGGCTCAGCCCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GWVLPIPGQLKVGGPYILFAAGL*AQPVWG
Trigger: ACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAA...CAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGACCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCCCAAGTCCCTGGAGGTaGTCTGGGGCCTCACATCCG +
Preference number: 4 (lower is better)
Translates to: VTPWTKAQGGNVTGPGRSPSPWR*SGASHP
Trigger: CGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGG...GCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GGCTGGGTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCTCAAGGAGGCAATGTaGCCGGGCCAGGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GWVLPIPGQLKVGGPYILLKEAM*PGQEGA
Trigger: TGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAG...CAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGACCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGTGGGGTGGGAGGAGTaGCCCCCTGGACTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQVGWEE*PPGLRL
Trigger: GAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCAC...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCCTTCTCACAACAACCCTGTaGGGTAGGTGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PIPGQLKVGGPYILPEGLLTTTL*GRWGGR
Trigger: CCTCCCACCCCACCTACCTCACAGGGTTGTTGTGAG...AAGGCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCAAGCACCAGCTTGCCATaGCGGAGGAAGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPSTSLP*RRKFRM
Trigger: CATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CAGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGAGCACCAGCTTGCCATaGCGGAGGAAGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: QEGAHPPCSRGARERGRRSTSLP*RRKFRM
Trigger: CATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT...CCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCTGCCTGGTCCTCGCTaGCGTAGTTGTAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GVGGVTPWTKAQGGNVTGLPGPR*RSCRRS
Trigger: GCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAG...CCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCGGCCTCACATCCGGGTaGCTCTGGCTTGTAACAGCA +
Preference number: 4 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTGLTSG*LWLVTA
Trigger: TGCTGTTACAAGCCAGAGGCACCCGGATGTGAGGCC...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR GCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCTCACAGCCCCACGGGTaGAGACAGAGGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLSQPHG*RQRRPG
Trigger: CCCCGGCCTCCTCTGTCTGCACCCGTGGGGCTGTGA...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGCCCAGGACTTTGCTCCTCTGTaGACCCTCACAACAACCCTG +
Preference number: 4 (lower is better)
Translates to: RHTHSPRAVPESSTAPAQDFAPL*TLTTTL
Trigger: CAGGGTTGTTGTGAGGGTGCACAGAGGAGCAAAGTC...CTGGGCAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCGCGGCCCCTATATACTaGCTGAGGGCCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LPIPGQLKVGGPYILPEGAAPIY*LRAFRD
Trigger: GTCCCTGAAGGCCCTCAGGCAGTATATAGGGGCCGC...GCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp AGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTGGCCTCACATCCGGGTaGCTCTGGCTTGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: RKEHIHHAAGEPGRGDAGGLTSG*LWLVTA
Trigger: AGCTGTTACAAGCCAGAGGCACCCGGATGTGAGGCC...ACCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610767.4
CDS-3UTR CCA 90 bp GTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGTGCAGCTCTTCCCCCTaGCACAGGCGGCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLPIPGQLKVGGPYILPECSSSP*HRRLRK
Trigger: CTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCA...CTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTGCAGCTCTTCCCCCTaGCACAGGCGGCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QLRSKDPSREVKHRRAPGCSSSP*HRRLRK
Trigger: CTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCA...GCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCCCTGGAGGTGATCTaGGGCCTCACATCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: QLRSKDPSREVKHRRAPGSLEVI*GLTSGC
Trigger: GCACCCGGATGTGAGGCCCCAGATCACCTCCAGGGA...GCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp TCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCGCCCAGGGGTCGGGCTaGGTCCTTCCCATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SICKHSVMPRGRAGSFPSAQGSG*VLPIPG
Trigger: CCCTGGGATGGGAAGGACCCAGCCCGACCCCTGGGC...GGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp ACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGACACAGGAGGGCCCCTaGCTCAGCCGCCATACCCAC +
Preference number: 4 (lower is better)
Translates to: TAEKQGPIPGSQTQEGPWTQEGP*LSRHTH
Trigger: GTGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGT...CCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCCCTTGGTTTTGCGGCTaGACTCTGAGCTCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTPWFCG*TLSSAR
Trigger: ACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGG...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456470.1
CDS-3UTR TCA 90 bp GTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCTTTGCGGCTGGACTCTaGGCTCAGCCCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VTPWTKAQGGNVTGPGRSFAAGL*AQPVWG
Trigger: ACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAA...GCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCGCTCAGCCTCAGGTCTaGGAGGGTGCGGACGGGAAC +
Preference number: 4 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPAQPQV*EGADGN
Trigger: GTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGC...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR TCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCGTGGGGTGGGAGGAGTaGCCCCCTGGACTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLVGWEE*PPGLRL
Trigger: GAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCAC...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp TGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCCTCACAACAACCCTGTaGGGTAGGTGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CEVGGVGGVTPWTKAQGGLTTTL*GRWGGR
Trigger: CCTCCCACCCCACCTACCTCACAGGGTTGTTGTGAG...GCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCCTCACAACAACCCTGTaGGGTAGGTGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VTPWTKAQGGNVTGPGRSLTTTL*GRWGGR
Trigger: CCTCCCACCCCACCTACCTCACAGGGTTGTTGTGAG...GCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp AGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTCCCCTATATACTGCCTaGGGGCCTTCAGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: RKEHIHHAAGEPGRGDAGPLYTA*GPSGTL
Trigger: CAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGG...ACCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCCCATCCCAGGGCAGCTaGAGGTGGGCGGCCCCTATA +
Preference number: 4 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPPSQGS*RWAAPI
Trigger: TATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGG...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCTCGCGGCACAGCGTCTaGCGGGTGGTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPSRHSV*RVVRNT
Trigger: GGTGTTCCTGACCACCCGGCAGACGCTGTGCCGCGA...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR GCA 90 bp GGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGCTGAGGAAGGACTTCTaGTCGCGGCACAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GVTPWTKAQGGNVTGPGRLRKDF*SRHSVC
Trigger: GCAGACGCTGTGCCGCGAGCAGAAGTCCTTCCTCAG...CCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCCTGAGGAAGGACTTCTaGTCGCGGCACAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: VTPWTKAQGGNVTGPGRSLRKDF*SRHSVC
Trigger: GCAGACGCTGTGCCGCGAGCAGAAGTCCTTCCTCAG...GCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp ACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACAAGCACGCGGTACACGTaGTTGGGTGGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TPWTKAQGGNVTGPGRSTSTRYT*LGGTWV
Trigger: CACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCT...TGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCATCACAGCCCCACGGGTaGAGACAGAGGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HLQTQCYAQGSGWVLPIPSQPHG*RQRRPG
Trigger: CCCCGGCCTCCTCTGTCTGCACCCGTGGGGCTGTGA...TGGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp ACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCCAGGCCTTCAGGGACTTTaGTCCTCTGTGCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: THPGKSNTGGPLAQPPYPGLQGL*SSVHPH
Trigger: GTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCC...TGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATGCAAACACAGTGTTATaGCCAGGGGTCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHANTVL*PGVGLG
Trigger: ACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGC...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCCTTGCAAACACAGTGTTATaGCCAGGGGTCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PIPGQLKVGGPYILPEGLANTVL*PGVGLG
Trigger: ACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGC...AAGGCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp ACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACAGCGCTGGGCCAGCAATaGAAATGGCTGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TPWTKAQGGNVTGPGRSTALGQQ*KWLGVG
Trigger: TCCCACCCCCAGCCATTTGCATTGCTGGCCCAGCGC...TGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCACAGCGTCTGCCGGGTaGTCAGGAACACCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPTASAG*SGTPCP
Trigger: GGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR CCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAATCCCTGGAGGTGATCTaGGGCCTCACATCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQSLEVI*GLTSGC
Trigger: GCACCCGGATGTGAGGCCCCAGATCACCTCCAGGGA...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp ATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCAGCCCAGGGGTCGGGCTaGGTCCTTCCCATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ISICKHSVMPRGRAGSFPAQGSG*VLPIPG
Trigger: CCCTGGGATGGGAAGGACCCAGCCCGACCCCTGGGC...TGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp TCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCACACAGGAGGGCCCCTaGCTCAGCCGCCATACCCAC +
Preference number: 4 (lower is better)
Translates to: SDTAEKQGPIPGSQTQEGTQEGP*LSRHTH
Trigger: GTGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGT...GCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCACACAGGAGGGCCCCTaGCTCAGCCGCCATACCCAC +
Preference number: 4 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPTQEGP*LSRHTH
Trigger: GTGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGT...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp TCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCCTGGCACAGGCGGCTaGGGAAGGACTTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SICKHSVMPRGRAGSFPSPGTGG*GRTSAR
Trigger: GCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGG...GGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGTGGGTGGGACCTGGGTaGCCGTGTAGTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GVTPWTKAQGGNVTGPGRWVGPG*PCSPSL
Trigger: AAGAGAAGGACTACACGGTCACCCAGGTCCCACCCA...CCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp ACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACATTTGCGGCTGGACTCTaGGCTCAGCCCGTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TPWTKAQGGNVTGPGRSTFAAGL*AQPVWG
Trigger: ACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAA...TGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCTCATCCCGGTCCGACTaGAGCTCTTCCCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLSSRSD*SSSPWH
Trigger: GTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGA...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCAGACATTGCCACACATCTGCCATGAGCAGTCCACTCTGCCCAGAGGTCCTGAGCACGCGGTACACGTaGTTGGGTGGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ARHCHTSAMSSPLCPEVLSTRYT*LGGTWV
Trigger: CACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCT...CAGGACCTCTGGGCAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCAGCACGCGGTACACGTaGTTGGGTGGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLSTRYT*LGGTWV
Trigger: CACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCT...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp TGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCCACACACAGGAACTCTaGCTGGTCCTCGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: CEVGGVGGVTPWTKAQGGHTQEL*LVLAAV
Trigger: TACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTG...GCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp TGGTGGGGTCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGCCGGGGAGAGGGTaGTTCTTCCTTCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WWGRTQLRSKDPSREVKHRPGRG*FFLLRP
Trigger: GGGCCTGAGAAGGAAGAAGCACCCTCTCCCCGGCCT...GTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCGACTTTGCTCCTCTGTaGACCCTCACAACAACCCTG +
Preference number: 4 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTDFAPL*TLTTTL
Trigger: CAGGGTTGTTGTGAGGGTGCACAGAGGAGCAAAGTC...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGGCAAACACAGTGTTATaGCCAGGGGTCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GVTPWTKAQGGNVTGPGRANTVL*PGVGLG
Trigger: ACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGC...CCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCTCAGGTCTGAGAGGGTaGGGACGGGAACCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VTPWTKAQGGNVTGPGRSSGLRG*GREPFS
Trigger: GGAGAAAGGTTCCCGTCCGCACCCTCTCAGACCTGA...GCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402077.7
CDS-3UTR GCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATCGGGAACCTTGGTTTTaGGGCTGGACTCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHREPWF*GWTLSS
Trigger: TGAGCTCAGAGTCCAGCCGCAAAACCAAGGTTCCCG...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456470.1
CDS-3UTR GCA 90 bp TCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGGTAACAGCTTGGTTTTaGGGCTGGACTCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SAAIPTLPGQFLSPPPPLVTAWF*GWTLSS
Trigger: TGAGCTCAGAGTCCAGCCGCAAAACCAAGCTGTTAC...CAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610767.4
CDS-3UTR CCA 90 bp GTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGTACACGTGCTTGGGTaGGACCTGGGTGACCGTGTA +
Preference number: 4 (lower is better)
Translates to: VLPIPGQLKVGGPYILPEVHVLG*DLGDRV
Trigger: TACACGGTCACCCAGGTCCCACCCAAGCACGTGTAC...CTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp TGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCGCTCCTCCGTGCTCTTaGTTTTGCGGCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: CEVGGVGGVTPWTKAQGGAPPCS*FCGWTL
Trigger: CAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGC...GCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CCA 90 bp GTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCGCTCCTCCGTGCTCTTaGTTTTGCGGCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: VTPWTKAQGGNVTGPGRSAPPCS*FCGWTL
Trigger: CAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGC...GCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CCA 90 bp ACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCCAACATCCGGGTGCCTCTaGCTTGTAACAGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: THPGKSNTGGPLAQPPYPTSGCL*LVTAGM
Trigger: CATCCCTGCTGTTACAAGCCAGAGGCACCCGGATGT...TGGGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR CCA 90 bp CAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACATCCACCATGCAGCAGGGGGCTTGGTTTTGCGGCTaGACTCTGAGCTCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: QGGNVTGPGRSTSTMQQGAWFCG*TLSSAR
Trigger: ACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGC...CCCCTGCTGCATGGTGGATGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610767.4
CDS-3UTR CCA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCATGGCTTGTAACAGCTTaGTTTTGCGGCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPWLVTA*FCGWTL
Trigger: CAGAGTCCAGCCGCAAAACCAAGCTGTTACAAGCCA...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610767.4
CDS-3UTR TCA 90 bp CATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCACCAAGTCCCTGGAGGTaGTCTGGGGCCTCACATCCG +
Preference number: 4 (lower is better)
Translates to: HLQTQCYAQGSGWVLPIPPSPWR*SGASHP
Trigger: CGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGG...TGGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp TGGTGGGGTCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACCTCAAGGAGGCAATGTaGCCGGGCCAGGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: WWGRTQLRSKDPSREVKHLKEAM*PGQEGA
Trigger: TGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAG...GTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCCCCCTATATACTGCCTaGGGGCCTTCAGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: QLRSKDPSREVKHRRAPGPLYTA*GPSGTL
Trigger: CAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGG...GCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTCCATCCCAGGGCAGCTaGAGGTGGGCGGCCCCTATA +
Preference number: 4 (lower is better)
Translates to: PESPFANTVLCPGVGLGPPSQGS*RWAAPI
Trigger: TATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGG...AGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCAGGGGTCGGACACAGCTaGGAAGCAAGGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: HLQTQCYAQGSGWVLPIPGVGHS*EARTHP
Trigger: GGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCC...TGGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCAGACATTGCCACACATCTGCCATGAGCAGTCCACTCTGCCCAGAGGTCCTGCTGCCTGGTCCTCGCTaGCGTAGTTGTAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARHCHTSAMSSPLCPEVLLPGPR*RSCRRS
Trigger: GCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAG...CAGGACCTCTGGGCAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp ACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCACACACAGGAACTCTaGCTGGTCCTCGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: TAEKQGPIPGSQTQEGPWHTQEL*LVLAAV
Trigger: TACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTG...CCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAACTGGGCTTTCTCCTGTaGATCTGCCTCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQLGFLL*ICLHLH
Trigger: GTGCAGGTGGAGGCAGATGCACAGGAGAAAGCCCAG...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403888.7
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGCCTCACATCCGGGTaGCTCTGGCTTGTAACAGCA +
Preference number: 4 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQGLTSG*LWLVTA
Trigger: TGCTGTTACAAGCCAGAGGCACCCGGATGTGAGGCC...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR GCA 90 bp GCCAGACATTGCCACACATCTGCCATGAGCAGTCCACTCTGCCCAGAGGTCCTGGCGGCCCCTATATACTaGCTGAGGGCCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ARHCHTSAMSSPLCPEVLAAPIY*LRAFRD
Trigger: GTCCCTGAAGGCCCTCAGGCAGTATATAGGGGCCGC...CAGGACCTCTGGGCAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGTACACGTGCTTGGGTaGGACCTGGGTGACCGTGTA +
Preference number: 4 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQVHVLG*DLGDRV
Trigger: TACACGGTCACCCAGGTCCCACCCAAGCACGTGTAC...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp TCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCTCCTGGGGCCCACCTTaGGCCTTAAGAGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SICKHSVMPRGRAGSFPSSWGPP*ALRGPR
Trigger: CCTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGA...GGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACAGCCCAGGGGTCGGGCTaGGTCCTTCCCATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASSPQPASPIPESPFANTAQGSG*VLPIPG
Trigger: CCCTGGGATGGGAAGGACCCAGCCCGACCCCTGGGC...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp TCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCTGGGTGGGACCTGGGTaGCCGTGTAGTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SDTAEKQGPIPGSQTQEGWVGPG*PCSPSL
Trigger: AAGAGAAGGACTACACGGTCACCCAGGTCCCACCCA...GCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp ACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACACCCCTATATACTGCCTaGGGGCCTTCAGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: TPWTKAQGGNVTGPGRSTPLYTA*GPSGTL
Trigger: CAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGG...TGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCATCCCGGTCCGACTaGAGCTCTTCCCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PESPFANTVLCPGVGLGPSSRSD*SSSPWH
Trigger: GTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGA...AGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCACAAGCACGCGGTACACGTaGTTGGGTGGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PIYCLRAFRDFAPLCTLTSTRYT*LGGTWV
Trigger: CACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCT...TGTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp ACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACACCGTGCTCTTGGTTTTaGGGCTGGACTCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TPWTKAQGGNVTGPGRSTPCSWF*GWTLSS
Trigger: TGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGG...TGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR GCA 90 bp TGGTGGGGTCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACTGCTGCTCCTCCAGCTaGTCCTCCGTGCTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: WWGRTQLRSKDPSREVKHCCSSS*SSVLLV
Trigger: AACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCA...GTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR GCA 90 bp CCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCACAAGGCCGGGGAGAGGGTaGTTCTTCCTTCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PIYCLRAFRDFAPLCTLTRPGRG*FFLLRP
Trigger: GGGCCTGAGAAGGAAGAAGCACCCTCTCCCCGGCCT...TGTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCCTTACATTGCCACACATCTaGCATGAGCAGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: PIPGQLKVGGPYILPEGLTLPHI*HEQSTL
Trigger: CAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGT...AAGGCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACATTGCCACACATCTaGCATGAGCAGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHTLPHI*HEQSTL
Trigger: CAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGT...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCGGCCTTCAGGGACTTTaGTCCTCTGTGCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPGLQGL*SSVHPH
Trigger: GTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCC...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCAGACATTGCCACACATCTGCCATGAGCAGTCCACTCTGCCCAGAGGTCCTGGCAAACACAGTGTTATaGCCAGGGGTCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ARHCHTSAMSSPLCPEVLANTVL*PGVGLG
Trigger: ACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGC...CAGGACCTCTGGGCAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCACAGCGCTGGGCCAGCAATaGAAATGGCTGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PIYCLRAFRDFAPLCTLTALGQQ*KWLGVG
Trigger: TCCCACCCCCAGCCATTTGCATTGCTGGCCCAGCGC...TGTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp ACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACATCAGGTCTGAGAGGGTaGGGACGGGAACCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TPWTKAQGGNVTGPGRSTSGLRG*GREPWF
Trigger: AAACCAAGGTTCCCGTCCGCACCCTCTCAGACCTGA...TGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456470.1
CDS-3UTR CCA 90 bp GCCAGACATTGCCACACATCTGCCATGAGCAGTCCACTCTGCCCAGAGGTCCTGGTACACGTGCTTGGGTaGGACCTGGGTGACCGTGTA +
Preference number: 4 (lower is better)
Translates to: ARHCHTSAMSSPLCPEVLVHVLG*DLGDRV
Trigger: TACACGGTCACCCAGGTCCCACCCAAGCACGTGTAC...CAGGACCTCTGGGCAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp ATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCTGGAGGTGATCTaGGGCCTCACATCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: ISICKHSVMPRGRAGSFPSLEVI*GLTSGC
Trigger: GCACCCGGATGTGAGGCCCCAGATCACCTCCAGGGA...TGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACAGCTCAGCCTCAGGTCTaGGAGGGTGCGGACGGGAAC +
Preference number: 4 (lower is better)
Translates to: ASSPQPASPIPESPFANTAQPQV*EGADGN
Trigger: GTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGC...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR TCA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACAGTGGGGTGGGAGGAGTaGCCCCCTGGACTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASSPQPASPIPESPFANTVGWEE*PPGLRL
Trigger: GAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCAC...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GCCAGACATTGCCACACATCTGCCATGAGCAGTCCACTCTGCCCAGAGGTCCTGCCCCTATATACTGCCTaGGGGCCTTCAGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: ARHCHTSAMSSPLCPEVLPLYTA*GPSGTL
Trigger: CAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGG...CAGGACCTCTGGGCAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp TACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCGGGGTCGGACACAGCTaGGAAGCAAGGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: YLNLHLQTQCYAQGSGWVGVGHS*EARTHP
Trigger: GGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCC...GACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp TCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCAGCACCAGCTTGCCATaGCGGAGGAAGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: SDTAEKQGPIPGSQTQEGSTSLP*RRKFRM
Trigger: CATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT...GCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCCCGTGCTCTTGGTTTTaGGGCTGGACTCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLPCSWF*GWTLSS
Trigger: TGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGG...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR GCA 90 bp TGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCACATTGCCACACATCTaGCATGAGCAGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: CEVGGVGGVTPWTKAQGGTLPHI*HEQSTL
Trigger: CAGAGTGGACTGCTCATGGCAGATGTGTGGCAATGT...GCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGGAGCACATCCACCATaGAGCAGGGGAGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: QYLNLHLQTQCYAQGSGWGAHPP*SRGARE
Trigger: CTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCC...CCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp TCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCGGAACCTTTCTCCTGTaGATCTGCCTCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: SDTAEKQGPIPGSQTQEGGTFLL*ICLHLH
Trigger: GTGCAGGTGGAGGCAGATGCACAGGAGAAAGGTTCC...GCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402077.7
CDS-3UTR CCA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACAACAGCGTCTGCCGGGTaGTCAGGAACACCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ASSPQPASPIPESPFANTTASAG*SGTPCP
Trigger: GGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR CCA 90 bp TCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCGTACACGTGCTTGGGTaGGACCTGGGTGACCGTGTA +
Preference number: 4 (lower is better)
Translates to: SICKHSVMPRGRAGSFPSVHVLG*DLGDRV
Trigger: TACACGGTCACCCAGGTCCCACCCAAGCACGTGTAC...GGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCTCTTGGTTTTGCGGCTaGACTCTGAGCTCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: PFANTVLCPGVGLGPSHPSWFCG*TLSSAR
Trigger: ACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGA...GGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CCA 90 bp TGGTGGGGTCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACACATCCGGGTGCCTCTaGCTTGTAACAGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: WWGRTQLRSKDPSREVKHTSGCL*LVTAGM
Trigger: CATCCCTGCTGTTACAAGCCAGAGGCACCCGGATGT...GTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGACCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR CCA 90 bp GTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCAGCAATGCAAATGGCTaGGGGTGGGATCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: VTPWTKAQGGNVTGPGRSSNANG*GWDHQR
Trigger: TCTTTGGTGATCCCACCCCCAGCCATTTGCATTGCT...GCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp GTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGAGCAATGCAAATGGCTaGGGGTGGGATCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: VLPIPGQLKVGGPYILPESNANG*GWDHQR
Trigger: TCTTTGGTGATCCCACCCCCAGCCATTTGCATTGCT...CTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCACAAGCGGGATCCTGAGATaGCTGGGCTTTCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PIYCLRAFRDFAPLCTLTSGILR*LGFLLC
Trigger: GCACAGGAGAAAGCCCAGTCATCTCAGGATCCCGCT...TGTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403888.7
CDS-3UTR GCA 90 bp ATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCAGCCCGTTTGGGGTaGTGTGGAGCTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: ISICKHSVMPRGRAGSFPSARLG*CGAPWT
Trigger: TGTCCAAGGAGCTCCACAGCACCCCAAACGGGCTGA...TGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACATCAGGTCTGAGAGGGTaGGGACGGGAACCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: ASSPQPASPIPESPFANTSGLRG*GREPPA
Trigger: CGCTGGAGGTTCCCGTCCGCACCCTCTCAGACCTGA...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403888.7
CDS-3UTR GCA 90 bp ATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCAGGCCTCACATCCGGGTaGCTCTGGCTTGTAACAGCA +
Preference number: 4 (lower is better)
Translates to: ISICKHSVMPRGRAGSFPGLTSG*LWLVTA
Trigger: TGCTGTTACAAGCCAGAGGCACCCGGATGTGAGGCC...TGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR GCA 90 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGAGGCCGGGGAGAGGGTaGTTCTTCCTTCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PIPESPFANTVLCPGVGLRPGRG*FFLLRP
Trigger: GGGCCTGAGAAGGAAGAAGCACCCTCTCCCCGGCCT...CAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp AGGCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACAGCGCTGGGCCAGCAATaGAAATGGCTGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RPAPHNLHPQYLNLHLQTALGQQ*KWLGVG
Trigger: TCCCACCCCCAGCCATTTGCATTGCTGGCCCAGCGC...TGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGTCCCTGGAGGTGATCTaGGGCCTCACATCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: QYLNLHLQTQCYAQGSGWSLEVI*GLTSGC
Trigger: GCACCCGGATGTGAGGCCCCAGATCACCTCCAGGGA...CCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATATAAAGGATTTCAGATaGGAACCCCAAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QGPIPGSQTQEGPWLSRHIKDFR*EPQVPG
Trigger: TCCAGGGACTTGGGGTTCCCATCTGAAATCCTTTAT...ATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCATAAAGGATTTCAGATaGGAACCCCAAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LPIPGQLKVGGPYILPEGIKDFR*EPQVPG
Trigger: TCCAGGGACTTGGGGTTCCCATCTGAAATCCTTTAT...GCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCCTTATAAAGGATTTCAGATaGGAACCCCAAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PIPGQLKVGGPYILPEGLIKDFR*EPQVPG
Trigger: TCCAGGGACTTGGGGTTCCCATCTGAAATCCTTTAT...AAGGCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp ACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACAACATCCGGGTGCCTCTaGCTTGTAACAGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TPWTKAQGGNVTGPGRSTTSGCL*LVTAWF
Trigger: AAACCAAGCTGTTACAAGCCAGAGGCACCCGGATGT...TGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610767.4
CDS-3UTR TCA 90 bp CAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGTGGGGTCACGGTCAATaGGGTAGGCCCCGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: QYLNLHLQTQCYAQGSGWWGHGQ*GRPRSH
Trigger: ATGAGACCGGGGCCTACCTCATTGACCGTGACCCCA...CCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGCTCAAGGAGGCAATGTaGCCGGGCCAGGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QYLNLHLQTQCYAQGSGWLKEAM*PGQEGA
Trigger: TGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAG...CCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGCTCAAGGAGGCAATGTaGCCGGGCCAGGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PIPESPFANTVLCPGVGLLKEAM*PGQEGA
Trigger: TGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAG...CAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGCTCACAACAACCCTGTaGGGTAGGTGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PIPESPFANTVLCPGVGLLTTTL*GRWGGR
Trigger: CCTCCCACCCCACCTACCTCACAGGGTTGTTGTGAG...CAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp GTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCTGCATCCCCAATACCTaGATCTCCATTTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: VTPWTKAQGGNVTGPGRSCIPNT*ISICKH
Trigger: GTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCA...GCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp ATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCAAGCACCAGCTTGCCATaGCGGAGGAAGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: ISICKHSVMPRGRAGSFPSTSLP*RRKFRM
Trigger: CATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT...TGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp TACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCACACACAGGAACTCTaGCTGGTCCTCGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: YLNLHLQTQCYAQGSGWVHTQEL*LVLAAV
Trigger: TACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTG...GACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp TACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCTCAGCCCGTTTGGGGTaGTGTGGAGCTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: YLNLHLQTQCYAQGSGWVSARLG*CGAPWT
Trigger: TGTCCAAGGAGCTCCACAGCACCCCAAACGGGCTGA...GACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp AGGCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACAGCGGCCCCTATATACTaGCTGAGGGCCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RPAPHNLHPQYLNLHLQTAAPIY*LRAFRD
Trigger: GTCCCTGAAGGCCCTCAGGCAGTATATAGGGGCCGC...TGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCAGCAATGCAAATGGCTaGGGGTGGGATCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLSNANG*GWDHQR
Trigger: TCTTTGGTGATCCCACCCCCAGCCATTTGCATTGCT...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAAGGTTTTATTACATGGTaGGGTCGGACACAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQGFITW*GRTQLR
Trigger: TCTCAGCTGTGTCCGACCCCACCATGTAATAAAACC...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR CCA 90 bp CAACCCTGTGAGGTAGGTGGGGTGGGAGGAGTGACCCCCTGGACTAAGGCTCAATTGGGTTTTATTACATaGTGGGGTCGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: QPCEVGGVGGVTPWTKAQLGFIT*WGRTQL
Trigger: CAGCTGTGTCCGACCCCACCATGTAATAAAACCCAA...TTGAGCCTTAGTCCAGGGGGTCACTCCTCCCACCCCACCTACCTCACAGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR CCA 90 bp ACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACATTGGGTTTTATTACATaGTGGGGTCGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: TPWTKAQGGNVTGPGRSTLGFIT*WGRTQL
Trigger: CAGCTGTGTCCGACCCCACCATGTAATAAAACCCAA...TGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR TCA 90 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGTGGGTGGGACCTGGGTaGCCGTGTAGTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PIPESPFANTVLCPGVGLWVGPG*PCSPSL
Trigger: AAGAGAAGGACTACACGGTCACCCAGGTCCCACCCA...CAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp ATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATTTCTCCTGTGCATCTaGCTCCACCTGCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: ISICKHSVMPRGRAGSFPFLLCI*LHLHLF
Trigger: GAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAA...TGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CCA 90 bp TACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCTCTTGGTTTTGCGGCTaGACTCTGAGCTCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: YLNLHLQTQCYAQGSGWVSWFCG*TLSSAR
Trigger: ACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGA...GACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCGGTTTTATTACATGGTaGGGTCGGACACAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLGFITW*GRTQLR
Trigger: TCTCAGCTGTGTCCGACCCCACCATGTAATAAAACC...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR CCA 90 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGTGCGGACGGGAACCTTaGTTTTGCGGCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: PIPESPFANTVLCPGVGLCGREP*FCGWTL
Trigger: CAGAGTCCAGCCGCAAAACCAAGGTTCCCGTCCGCA...CAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456470.1
CDS-3UTR TCA 90 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGAGGTTAGCGGGATCCTaGGATGACTGGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PIPESPFANTVLCPGVGLRLAGS*DDWAFS
Trigger: GGAGAAAGCCCAGTCATCTCAGGATCCCGCTAACCT...CAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403888.7
CDS-3UTR TCA 90 bp GCCCCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCTGCATCCCCAATACCTaGATCTCCATTTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: APIYCLRAFRDFAPLCTLCIPNT*ISICKH
Trigger: GTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCA...GAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp TACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCTTTCTCCTGTGCATCTaGCTCCACCTGCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: YLNLHLQTQCYAQGSGWVFLLCI*LHLHLF
Trigger: GAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAA...GACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CCA 90 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGACATCCGGGTGCCTCTaGCTTGTAACAGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: PIPESPFANTVLCPGVGLTSGCL*LVTAGM
Trigger: CATCCCTGCTGTTACAAGCCAGAGGCACCCGGATGT...CAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
CDS-3UTR CCA 90 bp CCTATATACTGCCTGAGGGCCTTCAGGGACTTTGCTCCTCTGTGCACCCTCACAAGCAATGCAAATGGCTaGGGGTGGGATCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: PIYCLRAFRDFAPLCTLTSNANG*GWDHQR
Trigger: TCTTTGGTGATCCCACCCCCAGCCATTTGCATTGCT...TGTGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCCTCAGGCAGTATATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR TCA 90 bp CATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCATGCATCCCCAATACCTaGATCTCCATTTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: HLQTQCYAQGSGWVLPIPCIPNT*ISICKH
Trigger: GTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCA...TGGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR GCA 90 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGACTTTGCTCCTCTGTaGACCCTCACAACAACCCTG +
Preference number: 4 (lower is better)
Translates to: PIPESPFANTVLCPGVGLDFAPL*TLTTTL
Trigger: CAGGGTTGTTGTGAGGGTGCACAGAGGAGCAAAGTC...CAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp ATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCAATAAAGGATTTCAGATaGGAACCCCAAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ISICKHSVMPRGRAGSFPIKDFR*EPQVPG
Trigger: TCCAGGGACTTGGGGTTCCCATCTGAAATCCTTTAT...TGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CCA 90 bp AGGCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACAGGTTTTATTACATGGTaGGGTCGGACACAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RPAPHNLHPQYLNLHLQTGFITW*GRTQLR
Trigger: TCTCAGCTGTGTCCGACCCCACCATGTAATAAAACC...TGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS-3UTR CCA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACATTGGGTTTTATTACATaGTGGGGTCGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: ASSPQPASPIPESPFANTLGFIT*WGRTQL
Trigger: CAGCTGTGTCCGACCCCACCATGTAATAAAACCCAA...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000610767.4
CDS TCA 90 bp CGAGGGGCCGAGGAGAAGCCCTCACTGCAAGCTCAGCCTCAGGTCTaGGAGGGTGCGGACGGGAACCTCCAGCGGGAAGCGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RGAEEKPSLQAQPQV*EGADGNLQREAEEE
Trigger: CTCCTCCTCCGCTTCCCGCTGGAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAGTGAGGGCTTCTCCTCGGCCCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403888.7
CDS GCA 90 bp GACTGCAGCTCTTCCCCCTGGCACAGGCGGCTGAGGAAGGACTTCTaGTCGCGGCACAGCGTCTGCCGGGTGGTCAGGAACACCGTGCCC +
Preference number: 5 (lower is better)
Translates to: DCSSSPWHRRLRKDF*SRHSVCRVVRNTVP
Trigger: GGGCACGGTGTTCCTGACCACCCGGCAGACGCTGTGCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000421900.5
ENST00000610767.4
CDS-3UTR CAA 90 bp CCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCACGCGGTACACGTGCTaGGGTGGGACCTGGGTGACC +
Preference number: 5 (lower is better)
Translates to: PWLSRHTHSPRAVPESSTTRYTC*GGTWVT
Trigger: GGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGT...GGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp CCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGTCCTGGGGCCCACCTaGGGCCTTAAGAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PWLSRHTHSPRAVPESSTVLGPT*GLKRSQ
Trigger: CTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGAC...GGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCAGTCCTGGGGCCCACCTaGGGCCTTAAGAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPVLGPT*GLKRSQ
Trigger: CTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGAC...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp CGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGCCCCTGCCCAGTGCTCCTCCGTGCTCTaGGTTTTGCGGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: RHTHSPRAVPESSTAPAQCSSVL*VLRLDS
Trigger: AGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCA...CTGGGCAGGGGCGGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CAA 90 bp CCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCACCGGGCCTTCAGGGACTTaGCTCCTCTGTGCACCCTCA +
Preference number: 5 (lower is better)
Translates to: PWLSRHTHSPRAVPESSTGPSGT*LLCAPS
Trigger: TGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCC...GGTGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp CAGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGGGGCCTTCAGGGACTTaGCTCCTCTGTGCACCCTCA +
Preference number: 5 (lower is better)
Translates to: QEGAHPPCSRGARERGRRGPSGT*LLCAPS
Trigger: TGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCC...CCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS GCA 90 bp CCACCTCCTCCTCCTGCTGCTGCTGCTCCTCCAGCTGCTCCTCCGTaGTCTTGGTTTTGCGGCTGGACTCTGAGCTCAGCCCGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PPPPPAAAAPPAAPP*SWFCGWTLSSARLG
Trigger: CCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGGAGGAGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000462640.1
ENST00000478231.5
CDS CCA 90 bp TCCGGACACAGGCTGAGGCGGGTGGGCTCACCTTGGTTTTGCGGCTaGACTCTGAGCTCAGCCCGTTTGGGGTGCTGTGGAGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SGHRLRRVGSPWFCG*TLSSARLGCCGAPW
Trigger: CCAAGGAGCTCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGGTGAGCCCACCCGCCTCAGCCTGTGTCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483389.5
CDS TCA 90 bp CGAGGGGCCGAGGAGAAGCCCTCACTGCAAGCTCAGCCTCAGGTCTaGGAGGGTGCGGACGGGAACCTTTCTCCTGTGCATCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: RGAEEKPSLQAQPQV*EGADGNLSPVHLPP
Trigger: TGGAGGCAGATGCACAGGAGAAAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAGTGAGGGCTTCTCCTCGGCCCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402077.7
CDS GCA 90 bp TCCACCTCCTCCACCTCCTCCTCCTGCTGCTGCTGCTCCTCCAGCTaGTCCTCCGTGCTCTTGGTTTTGCGGCTGGACTCTGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: STSSTSSSCCCCSSS*SSVLLVLRLDSELS
Trigger: GCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGGAGGAGGAGGTGGAGGAGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000462640.1
ENST00000478231.5
CDS GCA 90 bp AGAGGGTGCGGACGGGAACCTTTCTCCTGTGCATCTGCCTCCACCTaGACCTGTTCCACCTCCACCTCCTCCACCTCCTCCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RGCGREPFSCASAST*TCSTSTSSTSSSCC
Trigger: GCAGCAGGAGGAGGAGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAAGGTTCCCGTCCGCACCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000478231.5
CDS GCA 90 bp TCCTGGGGGTTGGCTGCACCTTTCTCCTGTGCATCTGCCTCCACCTaGACCTGTTCCACCTCCACCTCCTCCACCTCCTCCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SWGLAAPFSCASAST*TCSTSTSSTSSSCC
Trigger: GCAGCAGGAGGAGGAGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAAGGTGCAGCCAACCCCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462640.1
CDS GCA 90 bp GACTTCTCCGGACACAGGCTGAGGCGGGTGGGCTCACCTTGGTTTTaGGGCTGGACTCTGAGCTCAGCCCGTTTGGGGTGCTGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: DFSGHRLRRVGSPWF*GWTLSSARLGCCGA
Trigger: AGCTCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGGTGAGCCCACCCGCCTCAGCCTGTGTCCGGAGAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483389.5
CDS CCA 90 bp CCTCCTCCTGCTGCTGCTGCTCCTCCAGCTGCTCCTCCGTGCTCTTaGTTTTGCGGCTGGACTCTGAGCTCAGCCCGTTTGGGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: PPPAAAAPPAAPPCS*FCGWTLSSARLGCC
Trigger: ACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000462640.1
ENST00000478231.5
CDS-3UTR CAA 90 bp CAGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTCTTCCATCCGGTCTTaGATGATGCGGATCAGCGGG +
Preference number: 5 (lower is better)
Translates to: QEGAHPPCSRGARERGRRSSIRS*MMRISG
Trigger: CCCGCTGATCCGCATCATCAAAGACCGGATGGAAGA...CCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCTGCTCCTCCGTGCTCTaGGTTTTGCGGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTCSSVL*VLRLDS
Trigger: AGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCA...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CAA 90 bp ACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCACAGTCCTGGGGCCCACCTaGGGCCTTAAGAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: TPWTKAQGGNVTGPGRSTVLGPT*GLKRSQ
Trigger: CTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGAC...TGTGCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp CTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCGGGCCTTCAGGGACTTaGCTCCTCTGTGCACCCTCA +
Preference number: 5 (lower is better)
Translates to: LPIPGQLKVGGPYILPEGGPSGT*LLCAPS
Trigger: TGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCC...GCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS CCA 90 bp GGTCCGACTCAAGGTCGCGGCAGGCAGTGTGCAGCAGAGTCAGGGTaGGTGCTCAGAAATAGTGCCCGCTGGGCCAACGCTCCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: GPTQGRGRQCAAESG*VLRNSARWANAPSR
Trigger: TCTAGAAGGAGCGTTGGCCCAGCGGGCACTATTTCTGAGCACCCACCCTGACTCTGCTGCACACTGCCTGCCGCGACCTTGAGTCGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431531.1
CDS-3UTR CAA 90 bp GGCTGGGTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGTCCGTGCTCTTGGTTTaGCGGCTGGACTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GWVLPIPGQLKVGGPYILSVLLV*RLDSEL
Trigger: GAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGA...CAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGACCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CAA 90 bp GTCCTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGGCCTTCAGGGACTTaGCTCCTCTGTGCACCCTCA +
Preference number: 5 (lower is better)
Translates to: VLPIPGQLKVGGPYILPEGPSGT*LLCAPS
Trigger: TGAGGGTGCACAGAGGAGCAAAGTCCCTGAAGGCCC...CTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp CTTCCCATCCCAGGGCAGCTGAAGGTGGGCGGCCCCTATATACTGCCTGAGGGCACGGGAACCTTGGTTTaGCGGCTGGACTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LPIPGQLKVGGPYILPEGTGTLV*RLDSEL
Trigger: GAGCTCAGAGTCCAGCCGCAAAACCAAGGTTCCCGT...GCCCTCAGGCAGTATATAGGGGCCGCCCACCTTCAGCTGCCCTGGGATGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456470.1
CDS GCA 90 bp TTCTGCAGCTGGCTCCAGCAAGGAGTGGGCGGGAGGCTCCGGCTTTaGTTAGCAATCATCCTCCTGGGGGTTGGCTGCACCTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: FCSWLQQGVGGRLRL*LAIILLGVGCTFLL
Trigger: CAGGAGAAAGGTGCAGCCAACCCCCAGGAGGATGATTGCTAAGCAAAGCCGGAGCCTCCCGCCCACTCCTTGCTGGAGCCAGCTGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462640.1
CDS CCA 90 bp GGGCGGGAGGCTCCGGCTTTGCTTAGCAATCATCCTCCTGGGGGTTaGCTGCACCTTTCTCCTGTGCATCTGCCTCCACCTGCACCTGTT +
Preference number: 5 (lower is better)
Translates to: GREAPALLSNHPPGG*LHLSPVHLPPPAPV
Trigger: AACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAAGGTGCAGCCAACCCCCAGGAGGATGATTGCTAAGCAAAGCCGGAGCCTCCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462640.1
CDS-3UTR CAA 90 bp GGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGTTGTCCAGCACCAGCTaGCCATGCCGGAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: GVTPWTKAQGGNVTGPGRLSSTS*PCRRKF
Trigger: GAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAA...CCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp GTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGAGCTTGTCCAGCACCAGCTaGCCATGCCGGAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: VTPWTKAQGGNVTGPGRSLSSTS*PCRRKF
Trigger: GAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAA...GCTCCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp GGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGCTCAGCCGCCATACCTGTAACAGCTTGGTTTaGCGGCTGGACTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GPIPGSQTQEGPWLSRHTCNSLV*RLDSEL
Trigger: GAGCTCAGAGTCCAGCCGCAAAACCAAGCTGTTACA...GGTATGGCGGCTGAGCCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610767.4
CDS TCA 90 bp GAGGTAGGCCCCGGTCTCATCAGAGAGATCGGAGACATTGAGAGGTaGGGCGACTTGCCAAAGGCCACAGCATCGGAGGGTCACGGATGG +
Preference number: 5 (lower is better)
Translates to: EVGPGLIREIGDIER*GDLPKATASEGHGW
Trigger: CCATCCGTGACCCTCCGATGCTGTGGCCTTTGGCAAGTCGCCTCACCTCTCAATGTCTCCGATCTCTCTGATGAGACCGGGGCCTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431531.1
CDS-3UTR CAA 90 bp ACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCCCCTGGTTGTCCAGCACCAGCTaGCCATGCCGGAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: TAEKQGPIPGSQTQEGPWLSSTS*PCRRKF
Trigger: GAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAA...CCAGGGGCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp TCGGACACAGCTGAGAAGCAAGGACCCATCCCGGGAAGTCAAACACAGGAGGGCTCCGTGCTCTTGGTTTaGCGGCTGGACTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SDTAEKQGPIPGSQTQEGSVLLV*RLDSEL
Trigger: GAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGA...GCCCTCCTGTGTTTGACTTCCCGGGATGGGTCCTTGCTTCTCAGCTGTGTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402077.7
ENST00000403888.7
CDS-3UTR CAA 90 bp TACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCGTCCTGGGGCCCACCTaGGGCCTTAAGAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: YLNLHLQTQCYAQGSGWVVLGPT*GLKRSQ
Trigger: CTGGGACCTCTTAAGGCCCAAGGTGGGCCCCAGGAC...GACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp GGAGTGACCCCCTGGACTAAGGCTCAAGGAGGCAATGTGACCGGGCCAGGAAGGCTGGCTTGTAACAGCTaGGTTTTGCGGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: GVTPWTKAQGGNVTGPGRLACNS*VLRLDS
Trigger: AGAGTCCAGCCGCAAAACCAAGCTGTTACAAGCCAG...CCTTCCTGGCCCGGTCACATTGCCTCCTTGAGCCTTAGTCCAGGGGGTCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610767.4
CDS-3UTR CAA 90 bp CATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTCCTTCCCATCCCATTGTCCAGCACCAGCTaGCCATGCCGGAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: HLQTQCYAQGSGWVLPIPLSSTS*PCRRKF
Trigger: GAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAA...TGGGATGGGAAGGACCCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp CCAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGACGCGGTACACGTGCTaGGGTGGGACCTGGGTGACC +
Preference number: 5 (lower is better)
Translates to: PIPESPFANTVLCPGVGLTRYTC*GGTWVT
Trigger: GGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGT...CAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACAACGCGGTACACGTGCTaGGGTGGGACCTGGGTGACC +
Preference number: 5 (lower is better)
Translates to: ASSPQPASPIPESPFANTTRYTC*GGTWVT
Trigger: GGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGT...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp GCCCCTGGCTCAGCCGCCATACCCACTCTCCCCGGGCAGTTCCTGAGTCCTCCATACCTGAATCTCCATTaGCAAACACAGTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: APGSAAIPTLPGQFLSPPYLNLH*QTQCYA
Trigger: GGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA...TGGAGGACTCAGGAACTGCCCGGGGAGAGTGGGTATGGCGGCTGAGCCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp CAGGAAGGAGCACATCCACCATGCAGCAGGGGAGCCCGGGAGAGGGGACGCAGGTACCTGAATCTCCATTaGCAAACACAGTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: QEGAHPPCSRGARERGRRYLNLH*QTQCYA
Trigger: GGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA...CCTGCGTCCCCTCTCCCGGGCTCCCCTGCTGCATGGTGGATGTGCTCCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS-3UTR CAA 90 bp CAATACCTGAATCTCCATTTGCAAACACAGTGTTATGCCCAGGGGTCGGGCTGGGTGCGGACGGGAACCTaGGTTTTGCGGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: QYLNLHLQTQCYAQGSGWVRTGT*VLRLDS
Trigger: AGAGTCCAGCCGCAAAACCAAGGTTCCCGTCCGCAC...CCAGCCCGACCCCTGGGCATAACACTGTGTTTGCAAATGGAGATTCAGGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456470.1
CDS-3UTR CAA 90 bp GCCAGCTCCCCACAACCTGCATCCCCAATACCTGAATCTCCATTTGCAAACACATACCTGAATCTCCATTaGCAAACACAGTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: ASSPQPASPIPESPFANTYLNLH*QTQCYA
Trigger: GGCATAACACTGTGTTTGCAAATGGAGATTCAGGTA...TGTGTTTGCAAATGGAGATTCAGGTATTGGGGATGCAGGTTGTGGGGAGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000456470.1
ENST00000610767.4
CDS GCA 72 bp TCTTCCCCCTGGCACAGGCGGCTGAGGAAGGACTTCTaGTCGCGGCACAGCGTCTGCCGGGTGGTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SSPWHRRLRKDF*SRHSVCRVVRN
Trigger: GTTCCTGACCACCCGGCAGACGCTGTGCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000421900.5
ENST00000610767.4
CDS GCA 72 bp GCCCTCACTGCAAGCTCAGCCTCAGGTCTGAGAGGGTaGGGACGGGAACCTCCAGCGGGAAGCGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: ALTASSASGLRG*GREPPAGSGGG
Trigger: TCCTCCTCCGCTTCCCGCTGGAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAGTGAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403888.7
CDS TCA 72 bp GAGGAGAAGCCCTCACTGCAAGCTCAGCCTCAGGTCTaGGAGGGTGCGGACGGGAACCTCCAGCGGGAAGCG +
Preference number: 6 (lower is better)
Translates to: EEKPSLQAQPQV*EGADGNLQREA
Trigger: CGCTTCCCGCTGGAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAGTGAGGGCTTCTCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403888.7
CDS GCA 72 bp GGACACAGGCTGAGGCGGGTGGGCTCACCTTGGTTTTaGGGCTGGACTCTGAGCTCAGCCCGTTTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: GHRLRRVGSPWF*GWTLSSARLGC
Trigger: GCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGGTGAGCCCACCCGCCTCAGCCTGTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483389.5
CDS TCA 72 bp GGCGGGTGGGCTCACCTTGGTTTTGCGGCTGGACTCTaGGCTCAGCCCGTTTGGGGTGCTGTGGAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: GGWAHLGFAAGL*AQPVWGAVELL
Trigger: AAGGAGCTCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGGTGAGCCCACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483389.5
CDS GCA 72 bp TGGCTCCAGCAAGGAGTGGGCGGGAGGCTCCGGCTTTaGTTAGCAATCATCCTCCTGGGGGTTGGCTGCACC +
Preference number: 6 (lower is better)
Translates to: WLQQGVGGRLRL*LAIILLGVGCT
Trigger: GGTGCAGCCAACCCCCAGGAGGATGATTGCTAAGCAAAGCCGGAGCCTCCCGCCCACTCCTTGCTGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462640.1
CDS CCA 72 bp CTGCAGCACGCGGTACACGTGCTTGGGTGGGACCTGTaGGCAGAAGGGTCACATAGAGGGCACCTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: LQHAVHVLGWDL*AEGSHRGHLGD
Trigger: GTCACCCAGGTGCCCTCTATGTGACCCTTCTGCCCACAGGTCCCACCCAAGCACGTGTACCGCGTGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421900.5
CDS CCA 72 bp CCTCGTCGACTCCTTCCCCAGAGCAGGAGTCCCCTTTaGGAGGGAGGAAAGGTCCCAGGTCTCTCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: PRRLLPQSRSPL*EGGKVPGLSLS
Trigger: GGACAGGGAGAGACCTGGGACCTTTCCTCCCTCCCAAAGGGGACTCCTGCTCTGGGGAAGGAGTCGACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431531.1
CDS CCA 72 bp CAAGGTCGCGGCAGGCAGTGTGCAGCAGAGTCAGGGTaGGTGCTCAGAAATAGTGCCCGCTGGGCCAACGCT +
Preference number: 6 (lower is better)
Translates to: QGRGRQCAAESG*VLRNSARWANA
Trigger: AGCGTTGGCCCAGCGGGCACTATTTCTGAGCACCCACCCTGACTCTGCTGCACACTGCCTGCCGCGACCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431531.1
CDS CCA 72 bp AGGCTGAGGCGGGTGGGCTCACCTTGGTTTTGCGGCTaGACTCTGAGCTCAGCCCGTTTGGGGTGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: RLRRVGSPWFCG*TLSSARLGCCG
Trigger: TCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGGTGAGCCCACCCGCCTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483389.5
CDS CAA 72 bp CTGGCTCCAGCAAGGAGTGGGCGGGAGGCTCCGGCTTaGCTTAGCAATCATCCTCCTGGGGGTTGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: LAPARSGREAPA*LSNHPPGGWLH
Trigger: GTGCAGCCAACCCCCAGGAGGATGATTGCTAAGCAAAGCCGGAGCCTCCCGCCCACTCCTTGCTGGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462640.1
CDS CAA 90 bp TCCTCCTCCTGCTGCTGCTGCTCCTCCAGCTGCTCCTCCGTGCTCTaGGTTTTGCGGCTGGACTCTGAGCTCAGCCCGTTTGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: SSSCCCCSSSCSSVL*VLRLDSELSPFGVL
Trigger: CAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGGAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000462640.1
ENST00000478231.5
CDS CAA 90 bp GGAGAAGTAGCCTCGTCGACTCCTTCCCCAGAGCAGGAGTCCCCTTaGGGAGGGAGGAAAGGTCCCAGGTCTCTCCCTGTCCACAGCCCC +
Preference number: 6 (lower is better)
Translates to: GEVASSTPSPEQESP*GGRKGPRSLPVHSP
Trigger: GGGGCTGTGGACAGGGAGAGACCTGGGACCTTTCCTCCCTCCCAAAGGGGACTCCTGCTCTGGGGAAGGAGTCGACGAGGCTACTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431531.1
CDS CAA 90 bp AGACTTCTCCGGACACAGGCTGAGGCGGGTGGGCTCACCTTGGTTTaGCGGCTGGACTCTGAGCTCAGCCCGTTTGGGGTGCTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: RLLRTQAEAGGLTLV*RLDSELSPFGVLWS
Trigger: GCTCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGGTGAGCCCACCCGCCTCAGCCTGTGTCCGGAGAAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483389.5
CDS CAA 90 bp GACAGGAGACTTCTCCGGACACAGGCTGAGGCGGGTGGGCTCACCTaGGTTTTGCGGCTGGACTCTGAGCTCAGCCCGTTTGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: DRRLLRTQAEAGGLT*VLRLDSELSPFGVL
Trigger: CAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGGTGAGCCCACCCGCCTCAGCCTGTGTCCGGAGAAGTCTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483389.5
CDS TCA 72 bp GGTGCGGACGGGAACCTTGGTTTTGCGGCTGGACTCTaGGCTCAGCCCGTTTGGGGTGCTGTGGAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: GADGNLGFAAGL*AQPVWGAVELL
Trigger: AAGGAGCTCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGGTTCCCGTCCGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456470.1
CDS GCA 72 bp GCCCTCACTGCAAGCTCAGCCTCAGGTCTGAGAGGGTaGGGACGGGAACCTTTCTCCTGTGCATCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: ALTASSASGLRG*GREPFSCASAS
Trigger: GGAGGCAGATGCACAGGAGAAAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAGTGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402077.7
CDS CCA 72 bp CCTCCAGCTGCTCCTCCGTGCTCTTGGTTTTGCGGCTaGACTCTGAGCTCAGCCCGTTTGGGGTGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: PPAAPPCSWFCG*TLSSARLGCCG
Trigger: TCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000462640.1
ENST00000478231.5
CDS CCA 72 bp CTGAGAGGGTGCGGACGGGAACCTTGGTTTTGCGGCTaGACTCTGAGCTCAGCCCGTTTGGGGTGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: LRGCGREPWFCG*TLSSARLGCCG
Trigger: TCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGGTTCCCGTCCGCACCCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456470.1
CDS CAA 72 bp ACCCCCTCCTCAGCCATGTCCTTGTCCAGCACCAGCTaGCCATGCCGGAGGAAGTTCAGGATGGGCCCGAAG +
Preference number: 6 (lower is better)
Translates to: TPSSAMSLSSTS*PCRRKFRMGPK
Trigger: CTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAAGGACATGGCTGAGGAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000421900.5
ENST00000456470.1
ENST00000478231.5
ENST00000483389.5
ENST00000610767.4
CDS CAA 90 bp GTTCTGCAGCTGGCTCCAGCAAGGAGTGGGCGGGAGGCTCCGGCTTaGCTTAGCAATCATCCTCCTGGGGGTTGGCTGCACCTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: VLQLAPARSGREAPA*LSNHPPGGWLHLSP
Trigger: AGGAGAAAGGTGCAGCCAACCCCCAGGAGGATGATTGCTAAGCAAAGCCGGAGCCTCCCGCCCACTCCTTGCTGGAGCCAGCTGCAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462640.1
CDS TCA 72 bp CTGCTCCTCCGTGCTCTTGGTTTTGCGGCTGGACTCTaGGCTCAGCCCGTTTGGGGTGCTGTGGAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: LLLRALGFAAGL*AQPVWGAVELL
Trigger: AAGGAGCTCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402077.7
ENST00000403888.7
ENST00000462640.1
ENST00000478231.5
CDS TCA 72 bp GAGGAGAAGCCCTCACTGCAAGCTCAGCCTCAGGTCTaGGAGGGTGCGGACGGGAACCTTGGTTTTGCGGCT +
Preference number: 6 (lower is better)
Translates to: EEKPSLQAQPQV*EGADGNLGFAA
Trigger: AGCCGCAAAACCAAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAGTGAGGGCTTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456470.1
CDS TCA 72 bp GAGGAGAAGCCCTCACTGCAAGCTCAGCCTCAGGTCTaGGAGGGTGCGGACGGGAACCTTTCTCCTGTGCAT +
Preference number: 6 (lower is better)
Translates to: EEKPSLQAQPQV*EGADGNLSPVH
Trigger: ATGCACAGGAGAAAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAGTGAGGGCTTCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402077.7
CDS TCA 72 bp CCCGGTCTCATCAGAGAGATCGGAGACATTGAGAGGTaGGGCGACTTGCCAAAGGCCACAGCATCGGAGGGT +
Preference number: 6 (lower is better)
Translates to: PGLIREIGDIER*GDLPKATASEG
Trigger: ACCCTCCGATGCTGTGGCCTTTGGCAAGTCGCCTCACCTCTCAATGTCTCCGATCTCTCTGATGAGACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431531.1
CDS TCA 72 bp GGTAGGCCCCGGTCTCATCAGAGAGATCGGAGACATTaGGAGGTGAGGCGACTTGCCAAAGGCCACAGCATC +
Preference number: 6 (lower is better)
Translates to: GRPRSHQRDRRH*EVRRLAKGHSI
Trigger: GATGCTGTGGCCTTTGGCAAGTCGCCTCACCTCTCAATGTCTCCGATCTCTCTGATGAGACCGGGGCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431531.1
CDS GCA 72 bp CGGCTTTGCTTAGCAATCATCCTCCTGGGGGTTGGCTaGACCTTTCTCCTGTGCATCTGCCTCCACCTGCAC +
Preference number: 6 (lower is better)
Translates to: RLCLAIILLGVG*TFLLCICLHLH
Trigger: GTGCAGGTGGAGGCAGATGCACAGGAGAAAGGTGCAGCCAACCCCCAGGAGGATGATTGCTAAGCAAAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462640.1
CDS CCA 72 bp GACTTGCCAAAGGCCACAGCATCGGAGGGTCACGGATaGGGGACAGGAGACCTTAGAGGTCATCTTCAGACC +
Preference number: 6 (lower is better)
Translates to: DLPKATASEGHG*GTGDLRGHLQT
Trigger: GGTCTGAAGATGACCTCTAAGGTCTCCTGTCCCCCATCCGTGACCCTCCGATGCTGTGGCCTTTGGCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431531.1
CDS TCA 72 bp TGGTGGGAGGGAGAAAAGGTTAGCGGGATCCTGAGATaGCTGGGCTTTCTCCTGTGCATCTGCCTCCACCTG +
Preference number: 6 (lower is better)
Translates to: WWEGEKVSGILR*LGFLLCICLHL
Trigger: CAGGTGGAGGCAGATGCACAGGAGAAAGCCCAGTCATCTCAGGATCCCGCTAACCTTTTCTCCCTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403888.7