RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCTD16 (Homo sapiens)

Ensembl gene IDs: ENSG00000183775

Ensembl transcript IDs: ENST00000507359.3, ENST00000512467.6

Found 722 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGACAGATCTCTGGGAGGAGGGATCTGTGCTAGGACTATCAGTTaGAGGCATGGGCTTGTGTGCATACAAACTGATCCCAAGGAGCAG +
Preference number: 1 (lower is better)
Translates to: PDRSLGGGICARTIS*RHGLVCIQTDPKEQ
Trigger: CTGCTCCTTGGGATCAGTTTGTATGCACACAAGCCCATGCCTTCAACTGATAGTCCTAGCACAGATCCCTCCTCCCAGAGATCTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 90 bp ATAAGACTCAGTAGCAAGGACTTGTGCTTAGACTTGTCACATGTTTaGAAACAAGGACTTGGGAGCCACCCCTGGGTGAGTCTAGGAAAC +
Preference number: 1 (lower is better)
Translates to: IRLSSKDLCLDLSHV*KQGLGSHPWVSLGN
Trigger: GTTTCCTAGACTCACCCAGGGGTGGCTCCCAAGTCCTTGTTTCCAAACATGTGACAAGTCTAAGCACAAGTCCTTGCTACTGAGTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 90 bp GTGTGCAGCACAGCAAGCAATTGCAGGTGTCATTTTCTCCAGACGTaGAAGCTAGCTTATCACGGTGAGTTTCTTAGGGTATCAGTACTC +
Preference number: 1 (lower is better)
Translates to: VCSTASNCRCHFLQT*KLAYHGEFLRVSVL
Trigger: GAGTACTGATACCCTAAGAAACTCACCGTGATAAGCTAGCTTCCACGTCTGGAGAAAATGACACCTGCAATTGCTTGCTGTGCTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 90 bp TATGTTGCTCAGGGCTGTTCCATCTATAGGCGGTTGCCTTCTGAGTaGACCAATGATTGCCAAAATGATGTGCAATTCCATTGGGACAAT +
Preference number: 1 (lower is better)
Translates to: YVAQGCSIYRRLPSE*TNDCQNDVQFHWDN
Trigger: ATTGTCCCAATGGAATTGCACATCATTTTGGCAATCATTGGTTCACTCAGAAGGCAACCGCCTATAGATGGAACAGCCCTGAGCAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 90 bp GCATGTACTCTTATAACTCACTTACCCAGAACTCATTTCCAGTGTTaGAGGCTACCTGGACCTCACTTGATAACTCCACTCAAACTAGGT +
Preference number: 1 (lower is better)
Translates to: ACTLITHLPRTHFQC*RLPGPHLITPLKLG
Trigger: ACCTAGTTTGAGTGGAGTTATCAAGTGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGTTCTGGGTAAGTGAGTTATAAGAGTACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 90 bp CACTGGATTTTAGTATCGCGGGATTTCCCAGAAGGCAATCTAAGTTaGGGCTCTACACATGTGATTCCCCATTCATTGTATCCACTCAAT +
Preference number: 1 (lower is better)
Translates to: HWILVSRDFPEGNLS*GSTHVIPHSLYPLN
Trigger: ATTGAGTGGATACAATGAATGGGGAATCACATGTGTAGAGCCCCAACTTAGATTGCCTTCTGGGAAATCCCGCGATACTAAAATCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 90 bp GTAAATATGTTTCTGACTTCAGACAACCCACATACCTTTAGGGAATaGTCTCCCAAAGCTCACTGGATTTTAGTATCGCGGGATTTCCCA +
Preference number: 1 (lower is better)
Translates to: VNMFLTSDNPHTFRE*SPKAHWILVSRDFP
Trigger: TGGGAAATCCCGCGATACTAAAATCCAGTGAGCTTTGGGAGATCATTCCCTAAAGGTATGTGGGTTGTCTGAAGTCAGAAACATATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 90 bp GGAGAAGAGGTAATTTCATTGGGTGTCACTTGTTATTCATCAATGTaGAACAAACTGACCCAAGTCATCAAGTGCTTGAATGACGTCAGG +
Preference number: 1 (lower is better)
Translates to: GEEVISLGVTCYSSM*NKLTQVIKCLNDVR
Trigger: CCTGACGTCATTCAAGCACTTGATGACTTGGGTCAGTTTGTTGCACATTGATGAATAACAAGTGACACCCAATGAAATTACCTCTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 90 bp ACAAGACACCTAAACTACAGGCCTTCCTCATCACTACCAGATCCCTaGAAAAAGTTTCCTATTTCTGTAAATCTCAGCTTTCACATCTGC +
Preference number: 1 (lower is better)
Translates to: TRHLNYRPSSSLPDP*KKFPISVNLSFHIC
Trigger: GCAGATGTGAAAGCTGAGATTTACAGAAATAGGAAACTTTTTCCAGGGATCTGGTAGTGATGAGGAAGGCCTGTAGTTTAGGTGTCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 90 bp GTATATATTTATATGTTGCTCAGGGCTGTTCCATCTATAGGCGGTTaGCTTCTGAGTGAACCAATGATTGCCAAAATGATGTGCAATTCC +
Preference number: 1 (lower is better)
Translates to: VYIYMLLRAVPSIGG*LLSEPMIAKMMCNS
Trigger: GGAATTGCACATCATTTTGGCAATCATTGGTTCACTCAGAAGGCAACCGCCTATAGATGGAACAGCCCTGAGCAACATATAAATATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 90 bp CTAAGGAGTGACTCATTTAAAGCAGATTCTATTAACAGATTACAGTaGGACTCTCTGAAGTGCAGCTCCGCTAAGTTTGTGTTTCTGTGT +
Preference number: 1 (lower is better)
Translates to: LRSDSFKADSINRLQ*DSLKCSSAKFVFLC
Trigger: ACACAGAAACACAAACTTAGCGGAGCTGCACTTCAGAGAGTCCCACTGTAATCTGTTAATAGAATCTGCTTTAAATGAGTCACTCCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 90 bp AACAAAGGGTATGATAAGCAGTTACAGACAATGAAATCATTGGCCTaGTCAAAACACTTTCTCCCCCTTACTAGTTTCATTTCTGAGAGC +
Preference number: 1 (lower is better)
Translates to: NKGYDKQLQTMKSLA*SKHFLPLTSFISES
Trigger: GCTCTCAGAAATGAAACTAGTAAGGGGGAGAAAGTGTTTTGAGCAGGCCAATGATTTCATTGTCTGTAACTGCTTATCATACCCTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 90 bp AAACTTTCAACTCCATTCAAACCTTCAGGACAAGGAAACATTAGCTaGGTCTGTCATCCTAGTGTGAAGGCGAGAATTACAAAAATTCAG +
Preference number: 1 (lower is better)
Translates to: KLSTPFKPSGQGNIS*VCHPSVKARITKIQ
Trigger: CTGAATTTTTGTAATTCTCGCCTTCACACTAGGATGACAGACTCAGCTAATGTTTCCTTGTCCTGAAGGTTTGAATGGAGTTGAAAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 90 bp AGCAACTCTCATTACTTTACTAAGCATCAGTTCTGCTTCCATTTGTaGTGGATGGAGACCACATCAGCAGGAAGAGAATATAAAGTTATG +
Preference number: 1 (lower is better)
Translates to: SNSHYFTKHQFCFHL*WMETTSAGREYKVM
Trigger: CATAACTTTATATTCTCTTCCTGCTGATGTGGTCTCCATCCATCACAAATGGAAGCAGAACTGATGCTTAGTAAAGTAATGAGAGTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 90 bp ATAGGCGGTTGCCTTCTGAGTGAACCAATGATTGCCAAAATGATGTaGAATTCCATTGGGACAATTAGTAGTAGCATTTTCTATCATGTT +
Preference number: 1 (lower is better)
Translates to: IGGCLLSEPMIAKMM*NSIGTISSSIFYHV
Trigger: AACATGATAGAAAATGCTACTACTAATTGTCCCAATGGAATTGCACATCATTTTGGCAATCATTGGTTCACTCAGAAGGCAACCGCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 90 bp TACACACACAATATGGAGAAAGGGTTATGGTTGACAGACAGCAGATaGAATGGCAAAGAATTCATGAAAATCTATTCTGCCCTAGTCTTA +
Preference number: 1 (lower is better)
Translates to: YTHNMEKGLWLTDSR*NGKEFMKIYSALVL
Trigger: TAAGACTAGGGCAGAATAGATTTTCATGAATTCTTTGCCATTTCATCTGCTGTCTGTCAACCATAACCCTTTCTCCATATTGTGTGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 90 bp ATTCAACTCAAAGTAACAAAGGGTATGATAAGCAGTTACAGACAATaGAATCATTGGCCTGCTCAAAACACTTTCTCCCCCTTACTAGTT +
Preference number: 1 (lower is better)
Translates to: IQLKVTKGMISSYRQ*NHWPAQNTFSPLLV
Trigger: AACTAGTAAGGGGGAGAAAGTGTTTTGAGCAGGCCAATGATTTCATTGTCTGTAACTGCTTATCATACCCTTTGTTACTTTGAGTTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 90 bp TTTAAAGCAGATTCTATTAACAGATTACAGTGGGACTCTCTGAAGTaGAGCTCCGCTAAGTTTGTGTTTCTGTGTGTCTTAACTAGAATA +
Preference number: 1 (lower is better)
Translates to: FKADSINRLQWDSLK*SSAKFVFLCVLTRI
Trigger: TATTCTAGTTAAGACACACAGAAACACAAACTTAGCGGAGCTGCACTTCAGAGAGTCCCACTGTAATCTGTTAATAGAATCTGCTTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 90 bp ACATTCTCAAGGACTGACATCCACAGTAGAGACAAACTATTGTGCTaGACTAAAAAGCTGTTAAACTATGTAACCAAAGGCTTTTTCCAT +
Preference number: 1 (lower is better)
Translates to: TFSRTDIHSRDKLLC*TKKLLNYVTKGFFH
Trigger: ATGGAAAAAGCCTTTGGTTACATAGTTTAACAGCTTTTTAGTTCAGCACAATAGTTTGTCTCTACTGTGGATGTCAGTCCTTGAGAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 90 bp GAGACTAGCTCAAAATACAAATTTCTTTGCCCTGCTTCAAGTTTCTaGATCAGACTCTTTGAAGTTAGGTTGAAGGAATCTGCATTTTTA +
Preference number: 1 (lower is better)
Translates to: ETSSKYKFLCPASSF*IRLFEVRLKESAFL
Trigger: TAAAAATGCAGATTCCTTCAACCTAACTTCAAAGAGTCTGATTCAGAAACTTGAAGCAGGGCAAAGAAATTTGTATTTTGAGCTAGTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 90 bp TGGGAGGAGGGATCTGTGCTAGGACTATCAGTTGAAGGCATGGGCTaGTGTGCATACAAACTGATCCCAAGGAGCAGCAGGGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: WEEGSVLGLSVEGMG*CAYKLIPRSSRESL
Trigger: CAGAGATTCCCTGCTGCTCCTTGGGATCAGTTTGTATGCACACAAGCCCATGCCTTCAACTGATAGTCCTAGCACAGATCCCTCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCCAGTTTGGGATAAATaGCTCCCAAGGCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFPVWDK*LPRPLS
Trigger: GCTGAGAGGCCTTGGGAGTCATTTATCCCAAACTGG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGGCCCTGGCATCGTGTaGGTCATGTGTATATACATA +
Preference number: 2 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGGPGIV*VMCIYI
Trigger: TATGTATATACACATGACGCACACGATGCCAGGGCC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGGGAGGTCTAGGCCCTaGCATCGTGTGCGTCATGTG +
Preference number: 2 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAGRSRP*HRVRHV
Trigger: CACATGACGCACACGATGCCAGGGCCTAGACCTCCC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCAAGGAAACATTAGCTaGGTCTGTCATCCTAGTGTG +
Preference number: 2 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGQGNIS*VCHPSV
Trigger: CACACTAGGATGACAGACTCAGCTAATGTTTCCTTG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTGGGACTCTCTGAAGTaGAGCTCCGCTAAGTTTGTG +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFWDSLK*SSAKFV
Trigger: CACAAACTTAGCGGAGCTGCACTTCAGAGAGTCCCA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCATGCAAAACCACTCCTaGTTGAGAGCCACGGCCTTA +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFMQNHS*LRATAL
Trigger: TAAGGCCGTGGCTCTCAACCAGGAGTGGTTTTGCAT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTTGGAAACAAGGACTTaGGAGCCACCCCTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPLETRT*EPPLGE
Trigger: CTCACCCAGGGGTGGCTCCCAAGTCCTTGTTTCCAA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGGAAGGATGTCAGGCTaGGATCTCACCTTGTTTAGC +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFGRMSG*DLTLFS
Trigger: GCTAAACAAGGTGAGATCCCAGCCTGACATCCTTCC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGGGTCAGAGGAACACTaGCACGAACACTCCTTTTGC +
Preference number: 2 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSGSEEH*HEHSFC
Trigger: GCAAAAGGAGTGTTCGTGGCAGTGTTCCTCTGACCC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCAAAGGCTTTTTCCATaGACTCGGATAGCACTCCCA +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFQRLFP*TRIALP
Trigger: TGGGAGTGCTATCCGAGTGCATGGAAAAAGCCTTTG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGGGAGGTCTAGGCCCTaGCATCGTGTGCGTCATGTG +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTGRSRP*HRVRHV
Trigger: CACATGACGCACACGATGCCAGGGCCTAGACCTCCC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 90 bp AGCATGTACTCTTATAACTCACTTACCCAGAACTCATTTCCAGTGTaGCAGGCTACCTGGACCTCACTTGATAACTCCACTCAAACTAGG +
Preference number: 2 (lower is better)
Translates to: SMYSYNSLTQNSFPV*QATWTSLDNSTQTR
Trigger: CCTAGTTTGAGTGGAGTTATCAAGTGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGTTCTGGGTAAGTGAGTTATAAGAGTACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 90 bp GGTGACATCACATTCACAGCATCAGAAACAGATGTCACAAGGAGCTaGATAATCCCTGGTCAGATGCACTTGAAATTTCCAGGTAACCTG +
Preference number: 2 (lower is better)
Translates to: GDITFTASETDVTRS*IIPGQMHLKFPGNL
Trigger: CAGGTTACCTGGAAATTTCAAGTGCATCTGACCAGGGATTATCAAGCTCCTTGTGACATCTGTTTCTGATGCTGTGAATGTGATGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCCAGTTTGGGATAAATaGCTCCCAAGGCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAPVWDK*LPRPLS
Trigger: GCTGAGAGGCCTTGGGAGTCATTTATCCCAAACTGG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGATGCCCGAGTCACAGTaGCTACCAGAGTTACTAGAG +
Preference number: 2 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKMPESQ*LPELLE
Trigger: CTCTAGTAACTCTGGTAGTCACTGTGACTCGGGCAT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCATTCTAAGAGAGGGCTaGTGGGAGCAGGAGCACAGC +
Preference number: 2 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFILREG*WEQEHS
Trigger: GCTGTGCTCCTGCTCCCAGCAGCCCTCTCTTAGAAT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGACTCATTTCCAGTGTTaGAGGCTACCTGGACCTCAC +
Preference number: 2 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKTHFQC*RLPGPH
Trigger: GTGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCAGCACAGCAAGCAATTaGAGGTGTCATTTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFSTASN*RCHFLQ
Trigger: CTGGAGAAAATGACACCTGCAATTGCTTGCTGTGCT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGTTGTGAAGAAAGGCTaGGAAATCTTCCCAAAAGAA +
Preference number: 2 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGVVKKG*EIFPKE
Trigger: TTCTTTTGGGAAGATTTCCCAGCCTTTCTTCACAAC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATTAATGTGGATTATGTaGAAAGGCCACACCATTAAA +
Preference number: 2 (lower is better)
Translates to: MTQLNPSMGTAKARIPKALMWIM*KGHTIK
Trigger: TTTAATGGTGTGGCCTTTCCACATAATCCACATTAA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTACACAGAACTTAATGTaGATTATGTGGAAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGTQNLM*IMWKGH
Trigger: GTGGCCTTTCCACATAATCCACATTAAGTTCTGTGT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTCCAGCTTTGTTCACTaGATGTATAAGGAATGTCAG +
Preference number: 2 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGSSFVH*MYKECQ
Trigger: CTGACATTCCTTATACATCCAGTGAACAAAGCTGGA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTTGAATATTTTACCATaGGATGAGTGCCAGTCGAGA +
Preference number: 2 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGLNILP*DECQSR
Trigger: TCTCGACTGGCACTCATCCCATGGTAAAATATTCAA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGACTTGTCACATGTTTaGAAACAAGGACTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFDLSHV*KQGLGS
Trigger: GCTCCCAAGTCCTTGTTTCCAAACATGTGACAAGTC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCAGAAGCTCATCCATCTaGAATATTCTAAGAGAGGGC +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFRSSSI*NILREG
Trigger: GCCCTCTCTTAGAATATTTCAGATGGATGAGCTTCT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGAACACAAGGAATGTTTaGCCAGCTCTCCTCATCCTC +
Preference number: 2 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKNTRNV*PALLIL
Trigger: GAGGATGAGGAGAGCTGGTCAAACATTCCTTGTGTT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTCATACCTTTAGGGAATaGTCTCCCAAAGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPHTFRE*SPKAHW
Trigger: CCAGTGAGCTTTGGGAGATCATTCCCTAAAGGTATG...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGTAACATGTTTTGTCTaGCACCAACAAAGGATCCTC +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFVTCFV*HQQRIL
Trigger: GAGGATCCTTTGTTGGTGTCAGACAAAACATGTTAC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTTACCATGGGATGAGTaGCAGTCGAGAGGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: EKESPFQRIQQDENNRHFLPWDE*QSRGGP
Trigger: TGGGCCACCTCTCGACTGGCACTCATCCCATGGTAA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTTGCCAAAAGATCTCTaGTATGCAAAACCACTCCTG +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLPKDL*YAKPLL
Trigger: CAGGAGTGGTTTTGCATACCAGAGATCTTTTGGCAA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTATCAGTTGAAGGCATaGGCTTGTGTGCATACAAAC +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFYQLKA*ACVHTN
Trigger: GTTTGTATGCACACAAGCCCATGCCTTCAACTGATA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAAGAAGCTCATCCATCTaGAATATTCTAAGAGAGGGC +
Preference number: 2 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTRSSSI*NILREG
Trigger: GCCCTCTCTTAGAATATTTCAGATGGATGAGCTTCT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTACAGGGTAGAGAAGGCTaGGTGTGGAGTCATTTAGCA +
Preference number: 2 (lower is better)
Translates to: EMAHAKPINQHANWQKHLQGREG*VWSHLA
Trigger: TGCTAAATGACTCCACACTCAGCCTTCTCTACCCTG...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTCTGTCATCCTAGTGTaGAGGCGAGAATTACAAAAA +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFSVILV*RRELQK
Trigger: TTTTTGTAATTCTCGCCTTCACACTAGGATGACAGA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTCAAGGAAACATTAGCTaGGTCTGTCATCCTAGTGTG +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPQGNIS*VCHPSV
Trigger: CACACTAGGATGACAGACTCAGCTAATGTTTCCTTG...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTATGTCAGGTGGAGGTaGCAAAGAATTCTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFYVRWR*QRILPK
Trigger: TTTAGGAAGAATTCTTTGTCACCTCCACCTGACATA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCATTAATGAGAGATTTTaGCATCCGCCACCCATGATT +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFINERF*HPPPMI
Trigger: AATCATGGGTGGCGGATGTCAAAATCTCTCATTAAT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTAAAATTCCAAACTTATaGCATTGGGCCAGATCTTTT +
Preference number: 2 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGKIPNL*HWARSF
Trigger: AAAAGATCTGGCCCAATGGCATAAGTTTGGAATTTT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGGCCCTGGCATCGTGTaGGTCATGTGTATATACATA +
Preference number: 2 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAGPGIV*VMCIYI
Trigger: TATGTATATACACATGACGCACACGATGCCAGGGCC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGGGTCAGAGGAACACTaGCACGAACACTCCTTTTGC +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTGSEEH*HEHSFC
Trigger: GCAAAAGGAGTGTTCGTGGCAGTGTTCCTCTGACCC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCACTCATTTCCAGTGTTaGAGGCTACCTGGACCTCAC +
Preference number: 2 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFTHFQC*RLPGPH
Trigger: GTGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCATTCCCCAGTAATATaGAAAGCATGTGGCTATGAA +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFHSPVI*KACGYE
Trigger: TTCATAGCCACATGCTTTGCATATTACTGGGGAATG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCACACACCTGTGCCTATaGATAAAGATTCCTCTGAAT +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFTHLCL*IKIPLN
Trigger: ATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 90 bp CATGACAGGTCAGGGGTCAGAGGAACACTGCCACGAACACTCCTTTaGCAGTGTTTAATTTCCTGTTTAAAGAATGTAGTAGAAATATTG +
Preference number: 2 (lower is better)
Translates to: HDRSGVRGTLPRTLL*QCLISCLKNVVEIL
Trigger: CAATATTTCTACTACATTCTTTAAACAGGAAATTAAACACTGCAAAAGGAGTGTTCGTGGCAGTGTTCCTCTGACCCCTGACCTGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 90 bp CGAACTGCATTGGAAAGGAGAAGAGGTAATTTCATTGGGTGTCACTaGTTATTCATCAATGTGCAACAAACTGACCCAAGTCATCAAGTG +
Preference number: 2 (lower is better)
Translates to: RTALERRRGNFIGCH*LFINVQQTDPSHQV
Trigger: CACTTGATGACTTGGGTCAGTTTGTTGCACATTGATGAATAACAAGTGACACCCAATGAAATTACCTCTTCTCCTTTCCAATGCAGTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCATTCCCCTTTTCCTGCTaGATGCAGATCAGTTCATTT +
Preference number: 2 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSFPFSC*MQISSF
Trigger: AAATGAACTGATCTGCATTCAGCAGGAAAAGGGGAA...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAGAAAGGGTTATGGTTaGCAGACAGCAGATGAAATG +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPRKGYG*QTADEM
Trigger: CATTTCATCTGCTGTCTGTCAACCATAACCCTTTCT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTTTGTGGTCTACTGTTaGTCAGCTTGGGAAACATCT +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPFVVYC*SAWETS
Trigger: AGATGTTTCCCAAGCTGATCAACAGTAGACCACAAA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAACTTCAGGGAAACATaGCCGAGTCACAGTGACTAC +
Preference number: 2 (lower is better)
Translates to: EMAHAKPINQHANWQKHLNFRET*PSHSDY
Trigger: GTAGTCACTGTGACTCGGGCATGTTTCCCTGAAGTT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCACAAAACACCATACATaGCTTCCTTTTGTCTCATTG +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFTKHHT*LPFVSL
Trigger: CAATGAGACAAAAGGAAGGCATGTATGGTGTTTTGT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCAAAAGGATCCCAGAGTaGTTCACAACAAACACATTT +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFKRIPE*FTTNTF
Trigger: AAATGTGTTTGTTGTGAAGCACTCTGGGATCCTTTT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCGTGTTGCAGGCTACCTaGACCTCACTTGATAACTCC +
Preference number: 2 (lower is better)
Translates to: EKESPFQRIQQDENNRHFVLQAT*TSLDNS
Trigger: GGAGTTATCAAGTGAGGTCCAGGTAGCCTGCAACAC...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGAAGGCAATCTAAGTTaGGGCTCTACACATGTGATT +
Preference number: 2 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSEGNLS*GSTHVI
Trigger: AATCACATGTGTAGAGCCCCAACTTAGATTGCCTTC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTCTGAGAGCACTTTGTaGTCTACTGTTGATCAGCTT +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPSESTL*STVDQL
Trigger: AAGCTGATCAACAGTAGACCACAAAGTGCTCTCAGA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTAGTGCTTCTGTTGTGTaGGCACACCTGACAGATCTC +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTSASVV*AHLTDL
Trigger: GAGATCTGTCAGGTGTGCCCACACAACAGAAGCACT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 90 bp GCATCGTGTGCGTCATGTGTATATACATACTTAGTTGTGCTTGTGTaGCACAAATACTCATGCATACGGAGTCAATATAAACTGGCACAT +
Preference number: 2 (lower is better)
Translates to: ASCASCVYTYLVVLV*HKYSCIRSQYKLAH
Trigger: ATGTGCCAGTTTATATTGACTCCGTATGCATGAGTATTTGTGCAACACAAGCACAACTAAGTATGTATATACACATGACGCACACGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTCTGTCATCCTAGTGTaGAGGCGAGAATTACAAAAA +
Preference number: 2 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKSVILV*RRELQK
Trigger: TTTTTGTAATTCTCGCCTTCACACTAGGATGACAGA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTCAAGGAGAGTTTCCTaGAATTGTTTCTCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPSRRVS*NCFSLS
Trigger: AGACAGAGAGAAACAATTTCAGGAAACTCTCCTTGA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGATGGTATTGCCATGTaGTATCAAGAAACATTGAAA +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFDGIAM*YQETLK
Trigger: TTTCAATGTTTCTTGATAGCACATGGCAATACCATC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCACTCACACAAATAAATaGCATGCTGTTGTCTTAGTT +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFTHTNK*HAVVLV
Trigger: AACTAAGACAACAGCATGGCATTTATTTGTGTGAGT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAATATCTCCAGGCATTaGCAAAAGATCTCTGGTATG +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPNISRH*QKISGM
Trigger: CATACCAGAGATCTTTTGGCAATGCCTGGAGATATT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGGTTGTGAAGAAAGGCTaGGAAATCTTCCCAAAAGAA +
Preference number: 2 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKVVKKG*EIFPKE
Trigger: TTCTTTTGGGAAGATTTCCCAGCCTTTCTTCACAAC...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCACACCATTAAACTGTaGGCAGTAAGAACTCTGAAA +
Preference number: 2 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKHTIKL*AVRTLK
Trigger: TTTCAGAGTTCTTACTGCCCACAGTTTAATGGTGTG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTCCTATTTATTGACCTaGAAGACTTCCCGTATATGG +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPSYLLT*KTSRIW
Trigger: CCATATACGGGAAGTCTTCCAGGTCAATAAATAGGA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCCATCCCTGGGATATTaGTATGATACATTAAAAGAA +
Preference number: 2 (lower is better)
Translates to: NMSKAPISHHSALVPAKFPSLGY*YDTLKE
Trigger: TTCTTTTAATGTATCATACCAATATCCCAGGGATGG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTGTAGCACAAGTCTATaGAAGAGCTATTGGTACCTT +
Preference number: 2 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSACSTSL*KSYWYL
Trigger: AAGGTACCAATAGCTCTTTCATAGACTTGTGCTACA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGGTCAATTGGATCATTaGAACCCTTTTGAATTCACT +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPGQLDH*NPFEFT
Trigger: AGTGAATTCAAAAGGGTTTCAATGATCCAATTGACC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCAAGCTAAGCACTATTaGCATTGTGGGCTGGATAAC +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTQAKHY*HCGLDN
Trigger: GTTATCCAGCCCACAATGTCAATAGTGCTTAGCTTG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTTTTATCCTATTTATTaGCCTGGAAGACTTCCCGTA +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPFYPIY*PGRLPV
Trigger: TACGGGAAGTCTTCCAGGTCAATAAATAGGATAAAA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCATGGTTACCACTGAAATaGATGAGGAATGCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSWLPLK*MRNAEN
Trigger: ATTTTCAGCATTCCTCATGCATTTCAGTGGTAACCA...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCAAGCAACACACCTGTaGCTATGGATAAAGATTCCT +
Preference number: 2 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFQATHL*LWIKIP
Trigger: AGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACAAATTTCTTTGCCCTaGTTCAAGTTTCTGAATCAG +
Preference number: 2 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSQISLP*FKFLNQ
Trigger: CTGATTCAGAAACTTGAAGCAGGGCAAAGAAATTTG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGAAGGCAATCTAAGTTaGGGCTCTACACATGTGATT +
Preference number: 2 (lower is better)
Translates to: EMAHAKPINQHANWQKHLEGNLS*GSTHVI
Trigger: AATCACATGTGTAGAGCCCCAACTTAGATTGCCTTC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTCTCCCAAAGCTCACTaGATTTTAGTATCGCGGGAT +
Preference number: 2 (lower is better)
Translates to: EKESPFQRIQQDENNRHFSPKAH*ILVSRD
Trigger: ATCCCGCGATACTAAAATCCAGTGAGCTTTGGGAGA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTATAAGAATCAAAATTTaGTTCCCATTGTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: SLINSEENLALPLFSYEPIRIKI*FPLWEL
Trigger: CAGCTCCCACAATGGGAACCAAATTTTGATTCTTAT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAAACCAGCATGCAAATTaGCAAAAACATTTATCTGCC +
Preference number: 2 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSNQHAN*QKHLSA
Trigger: GGCAGATAAATGTTTTTGCCAATTTGCATGCTGGTT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 90 bp AAGGAAGAAATTAGTCATTGTTTTCCTCCTACAGATATCATCCAATaGCCTTTATTACCTGTGATACACATACACACATGCACACACACG +
Preference number: 2 (lower is better)
Translates to: KEEISHCFPPTDIIQ*PLLPVIHIHTCTHT
Trigger: CGTGTGTGTGCATGTGTGTATGTGTATCACAGGTAATAAAGGCAATTGGATGATATCTGTAGGAGGAAAACAATGACTAATTTCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 90 bp CAAAGTAACAAAGGGTATGATAAGCAGTTACAGACAATGAAATCATaGGCCTGCTCAAAACACTTTCTCCCCCTTACTAGTTTCATTTCT +
Preference number: 2 (lower is better)
Translates to: QSNKGYDKQLQTMKS*ACSKHFLPLTSFIS
Trigger: AGAAATGAAACTAGTAAGGGGGAGAAAGTGTTTTGAGCAGGCCAATGATTTCATTGTCTGTAACTGCTTATCATACCCTTTGTTACTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTACCAAATTCAACTTCTTaGCCCATTAAGCTCTGTGAT +
Preference number: 2 (lower is better)
Translates to: EMAHAKPINQHANWQKHLPNSTS*PIKLCD
Trigger: ATCACAGAGCTTAATGGGTCAAGAAGTTGAATTTGG...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGTAACATGTTTTGTCTaGCACCAACAAAGGATCCTC +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTVTCFV*HQQRIL
Trigger: GAGGATCCTTTGTTGGTGTCAGACAAAACATGTTAC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTAGGAAAATCTGGCTCTaGCACTTTTTAGCTATGAGC +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTRKIWL*HFLAMS
Trigger: GCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATTGAATATTTTACCATaGGATGAGTGCCAGTCGAGA +
Preference number: 2 (lower is better)
Translates to: EMAHAKPINQHANWQKHLLNILP*DECQSR
Trigger: TCTCGACTGGCACTCATCCCATGGTAAAATATTCAA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCACACACCTGTGCCTATaGATAAAGATTCCTCTGAAT +
Preference number: 2 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFTHLCL*IKIPLN
Trigger: ATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTCCCATTGTGGGAGCTaGTGTCAAGTAATTTTACAA +
Preference number: 2 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFSHCGS*CQVILQ
Trigger: TTGTAAAATTACTTGACACCAGCTCCCACAATGGGA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 90 bp ACCTGTAAACAATATGACGTTACATTTATGTACAAGCGAACTGCATaGGAAAGGAGAAGAGGTAATTTCATTGGGTGTCACTTGTTATTC +
Preference number: 2 (lower is better)
Translates to: TCKQYDVTFMYKRTA*ERRRGNFIGCHLLF
Trigger: GAATAACAAGTGACACCCAATGAAATTACCTCTTCTCCTTTCCAATGCAGTTCGCTTGTACATAAATGTAACGTCATATTGTTTACAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTACATTACAGTCAGGTCTaGAATTTAAGGAAGTTGGAA +
Preference number: 2 (lower is better)
Translates to: EMAHAKPINQHANWQKHLHYSQV*NLRKLE
Trigger: TTCCAACTTCCTTAAATTTCAGACCTGACTGTAATG...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCATTACAGTCAGGTCTaGAATTTAAGGAAGTTGGAA +
Preference number: 2 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFHYSQV*NLRKLE
Trigger: TTCCAACTTCCTTAAATTTCAGACCTGACTGTAATG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATGGTTACCACTGAAATaGATGAGGAATGCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: EMAHAKPINQHANWQKHLWLPLK*MRNAEN
Trigger: ATTTTCAGCATTCCTCATGCATTTCAGTGGTAACCA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCGCAAAAACATTTATCTaGCACAGAGTCACCATAAGG +
Preference number: 2 (lower is better)
Translates to: EKESPFQRIQQDENNRHFAKTFI*HRVTIR
Trigger: CCTTATGGTGACTCTGTGGCAGATAAATGTTTTTGC...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCACACCATTAAACTGTaGGCAGTAAGAACTCTGAAA +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTHTIKL*AVRTLK
Trigger: TTTCAGAGTTCTTACTGCCCACAGTTTAATGGTGTG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTTAATGTGGATTATGTaGAAAGGCCACACCATTAAA +
Preference number: 2 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSALMWIM*KGHTIK
Trigger: TTTAATGGTGTGGCCTTTCCACATAATCCACATTAA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCACACAGAACTTAATGTaGATTATGTGGAAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: EKESPFQRIQQDENNRHFTQNLM*IMWKGH
Trigger: GTGGCCTTTCCACATAATCCACATTAAGTTCTGTGT...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTTCCCATTGTGGGAGCTaGTGTCAAGTAATTTTACAA +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTSHCGS*CQVILQ
Trigger: TTGTAAAATTACTTGACACCAGCTCCCACAATGGGA...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAAAATTCCAAACTTATaGCATTGGGCCAGATCTTTT +
Preference number: 2 (lower is better)
Translates to: EMAHAKPINQHANWQKHLKIPNL*HWARSF
Trigger: AAAAGATCTGGCCCAATGGCATAAGTTTGGAATTTT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGATGGTATTGCCATGTaGTATCAAGAAACATTGAAA +
Preference number: 2 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFDGIAM*YQETLK
Trigger: TTTCAATGTTTCTTGATAGCACATGGCAATACCATC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCACTCACACAAATAAATaGCATGCTGTTGTCTTAGTT +
Preference number: 2 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFTHTNK*HAVVLV
Trigger: AACTAAGACAACAGCATGGCATTTATTTGTGTGAGT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTACAAAACACCATACATaGCTTCCTTTTGTCTCATTG +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTTKHHT*LPFVSL
Trigger: CAATGAGACAAAAGGAAGGCATGTATGGTGTTTTGT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTAGCAAAGCAGTAAAATaGAGCCTGAGGGTATTAATT +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTSKAVK*SLRVLI
Trigger: AATTAATACCCTCAGGCTCCATTTTACTGCTTTGCT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTATAAGAATCAAAATTTaGTTCCCATTGTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTIRIKI*FPLWEL
Trigger: CAGCTCCCACAATGGGAACCAAATTTTGATTCTTAT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCAATAAATTGAAACTGTaGGGCATCAAGATTGCAAGA +
Preference number: 2 (lower is better)
Translates to: EKESPFQRIQQDENNRHFNKLKL*GIKIAR
Trigger: TCTTGCAATCTTGATGCCCCACAGTTTCAATTTATT...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCCATCCCTGGGATATTaGTATGATACATTAAAAGAA +
Preference number: 2 (lower is better)
Translates to: TKITKFLQPTQRFLILQTPSLGY*YDTLKE
Trigger: TTCTTTTAATGTATCATACCAATATCCCAGGGATGG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGCAGGAGCACAGCCCTaGGGAGGTCTAGGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAAGAQP*GGLGPG
Trigger: GCCAGGGCCTAGACCTCCCAAGGGCTGTGCTCCTGC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp TCTCTGGGAGGAGGGATCTGTGCTAGGACTATCAGTTaGAGGCATGGGCTTGTGTGCATACAAACTGATCCC +
Preference number: 3 (lower is better)
Translates to: SLGGGICARTIS*RHGLVCIQTDP
Trigger: GGGATCAGTTTGTATGCACACAAGCCCATGCCTTCAACTGATAGTCCTAGCACAGATCCCTCCTCCCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp AGTAGCAAGGACTTGTGCTTAGACTTGTCACATGTTTaGAAACAAGGACTTGGGAGCCACCCCTGGGTGAGT +
Preference number: 3 (lower is better)
Translates to: SSKDLCLDLSHV*KQGLGSHPWVS
Trigger: ACTCACCCAGGGGTGGCTCCCAAGTCCTTGTTTCCAAACATGTGACAAGTCTAAGCACAAGTCCTTGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATCCAAACTTATGCCATaGGGCCAGATCTTTTTCTAC +
Preference number: 3 (lower is better)
Translates to: MTQLNPSMGTAKARIPKASKLMP*GQIFFY
Trigger: GTAGAAAAAGATCTGGCCCAATGGCATAAGTTTGGA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGGAGCTTCAGTTACCTaGTTGGGTTGTTACAGACAT +
Preference number: 3 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGGASVT*LGCYRH
Trigger: ATGTCTGTAACAACCCAACAAGGTAACTGAAGCTCC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp TATCAGTTGAAGGCATGGGCTTGTGTGCATACAAACTaGTCCCAAGGAGCAGCAGGGAATCTCTGTTTGCAT +
Preference number: 3 (lower is better)
Translates to: YQLKAWACVHTN*SQGAAGNLCLH
Trigger: ATGCAAACAGAGATTCCCTGCTGCTCCTTGGGATCAGTTTGTATGCACACAAGCCCATGCCTTCAACTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp CATTGCCAAAAGATCTCTGGTATGCAAAACCACTCCTaGTTGAGAGCCACGGCCTTAAATGCACATAACCCA +
Preference number: 3 (lower is better)
Translates to: HCQKISGMQNHS*LRATALNAHNP
Trigger: TGGGTTATGTGCATTTAAGGCCGTGGCTCTCAACCAGGAGTGGTTTTGCATACCAGAGATCTTTTGGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp GTGCTTAGACTTGTCACATGTTTGGAAACAAGGACTTaGGAGCCACCCCTGGGTGAGTCTAGGAAACATATT +
Preference number: 3 (lower is better)
Translates to: VLRLVTCLETRT*EPPLGESRKHI
Trigger: AATATGTTTCCTAGACTCACCCAGGGGTGGCTCCCAAGTCCTTGTTTCCAAACATGTGACAAGTCTAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATTAGTTGTGCTTGTGTaGCACAAATACTCATGCATA +
Preference number: 3 (lower is better)
Translates to: MTQLNPSMGTAKARIPKALVVLV*HKYSCI
Trigger: TATGCATGAGTATTTGTGCAACACAAGCACAACTAA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTGTGGGGCATCAAGATaGCAAGACACCAACAATACC +
Preference number: 3 (lower is better)
Translates to: NMSKAPISHHSALVPAKFCGASR*QDTNNT
Trigger: GGTATTGTTGGTGTCTTGCAATCTTGATGCCCCACA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp CAGGGCTGTTCCATCTATAGGCGGTTGCCTTCTGAGTaGACCAATGATTGCCAAAATGATGTGCAATTCCAT +
Preference number: 3 (lower is better)
Translates to: QGCSIYRRLPSE*TNDCQNDVQFH
Trigger: ATGGAATTGCACATCATTTTGGCAATCATTGGTTCACTCAGAAGGCAACCGCCTATAGATGGAACAGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 72 bp CTTATAACTCACTTACCCAGAACTCATTTCCAGTGTTaGAGGCTACCTGGACCTCACTTGATAACTCCACTC +
Preference number: 3 (lower is better)
Translates to: LITHLPRTHFQC*RLPGPHLITPL
Trigger: GAGTGGAGTTATCAAGTGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGTTCTGGGTAAGTGAGTTATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp ACAGCAAGCAATTGCAGGTGTCATTTTCTCCAGACGTaGAAGCTAGCTTATCACGGTGAGTTTCTTAGGGTA +
Preference number: 3 (lower is better)
Translates to: TASNCRCHFLQT*KLAYHGEFLRV
Trigger: TACCCTAAGAAACTCACCGTGATAAGCTAGCTTCCACGTCTGGAGAAAATGACACCTGCAATTGCTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTTCAAGTACTGTGTGTaGTCCTTAGTTCCACAACAA +
Preference number: 3 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGFKYCV*SLVPQQ
Trigger: TTGTTGTGGAACTAAGGACAACACACAGTACTTGAA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCTACCTGGACCTCACTaGATAACTCCACTCAAACTA +
Preference number: 3 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLPGPH*ITPLKL
Trigger: TAGTTTGAGTGGAGTTATCAAGTGAGGTCCAGGTAG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp TTTCTGACTTCAGACAACCCACATACCTTTAGGGAATaGTCTCCCAAAGCTCACTGGATTTTAGTATCGCGG +
Preference number: 3 (lower is better)
Translates to: FLTSDNPHTFRE*SPKAHWILVSR
Trigger: CCGCGATACTAAAATCCAGTGAGCTTTGGGAGATCATTCCCTAAAGGTATGTGGGTTGTCTGAAGTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 72 bp TATATGTTGCTCAGGGCTGTTCCATCTATAGGCGGTTaGCTTCTGAGTGAACCAATGATTGCCAAAATGATG +
Preference number: 3 (lower is better)
Translates to: YMLLRAVPSIGG*LLSEPMIAKMM
Trigger: CATCATTTTGGCAATCATTGGTTCACTCAGAAGGCAACCGCCTATAGATGGAACAGCCCTGAGCAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp TTAGTATCGCGGGATTTCCCAGAAGGCAATCTAAGTTaGGGCTCTACACATGTGATTCCCCATTCATTGTAT +
Preference number: 3 (lower is better)
Translates to: LVSRDFPEGNLS*GSTHVIPHSLY
Trigger: ATACAATGAATGGGGAATCACATGTGTAGAGCCCCAACTTAGATTGCCTTCTGGGAAATCCCGCGATACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCCACGAACACTCCTTTaGCAGTGTTTAATTTCCTGT +
Preference number: 3 (lower is better)
Translates to: NMSKAPISHHSALVPAKFPRTLL*QCLISC
Trigger: ACAGGAAATTAAACACTGCAAAAGGAGTGTTCGTGG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCATGTGGGGCATCAAGATaGCAAGACACCAACAATACC +
Preference number: 3 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSCGASR*QDTNNT
Trigger: GGTATTGTTGGTGTCTTGCAATCTTGATGCCCCACA...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGGAGTAAAGGAACTCTaGGCCTCTGCATATTCCCTA +
Preference number: 3 (lower is better)
Translates to: SLINSEENLALPLFSYEPGVKEL*ASAYSL
Trigger: TAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp ATGTGGATTATGTGGAAAGGCCACACCATTAAACTGTaGGCAGTAAGAACTCTGAAAACATGGAGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: MWIMWKGHTIKL*AVRTLKTWRKG
Trigger: CCCTTTTCTCCATGTTTTCAGAGTTCTTACTGCCCACAGTTTAATGGTGTGGCCTTTCCACATAATCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp TCACATGTTTGGAAACAAGGACTTGGGAGCCACCCCTaGGTGAGTCTAGGAAACATATTTTCCAATAAGATT +
Preference number: 3 (lower is better)
Translates to: SHVWKQGLGSHP*VSLGNIFSNKI
Trigger: AATCTTATTGGAAAATATGTTTCCTAGACTCACCCAGGGGTGGCTCCCAAGTCCTTGTTTCCAAACATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCAACTCATTTCCAGTGTaGCAGGCTACCTGGACCTCA +
Preference number: 3 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFNSFPV*QATWTS
Trigger: TGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGTT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAGAAGGCAATCTAAGTaGGGGCTCTACACATGTGAT +
Preference number: 3 (lower is better)
Translates to: SLINSEENLALPLFSYEPRRQSK*GLYTCD
Trigger: ATCACATGTGTAGAGCCCCAACTTAGATTGCCTTCT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAAAATTTGGTTCCCATaGTGGGAGCTGGTGTCAAGT +
Preference number: 3 (lower is better)
Translates to: SLINSEENLALPLFSYEPKIWFP*WELVSS
Trigger: ACTTGACACCAGCTCCCACAATGGGAACCAAATTTT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCAAATATCTCCAGGCATaGCCAAAAGATCTCTGGTAT +
Preference number: 3 (lower is better)
Translates to: NMSKAPISHHSALVPAKFKYLQA*PKDLWY
Trigger: ATACCAGAGATCTTTTGGCAATGCCTGGAGATATTT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 72 bp GATTCTATTAACAGATTACAGTGGGACTCTCTGAAGTaGAGCTCCGCTAAGTTTGTGTTTCTGTGTGTCTTA +
Preference number: 3 (lower is better)
Translates to: DSINRLQWDSLK*SSAKFVFLCVL
Trigger: TAAGACACACAGAAACACAAACTTAGCGGAGCTGCACTTCAGAGAGTCCCACTGTAATCTGTTAATAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp AACAACACAGGAACACAGAACTTAATGTGGATTATGTaGAAAGGCCACACCATTAAACTGTGGGCAGTAAGA +
Preference number: 3 (lower is better)
Translates to: NNTGTQNLMWIM*KGHTIKLWAVR
Trigger: TCTTACTGCCCACAGTTTAATGGTGTGGCCTTTCCACATAATCCACATTAAGTTCTGTGTTCCTGTGTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp GACTCATTTAAAGCAGATTCTATTAACAGATTACAGTaGGACTCTCTGAAGTGCAGCTCCGCTAAGTTTGTG +
Preference number: 3 (lower is better)
Translates to: DSFKADSINRLQ*DSLKCSSAKFV
Trigger: CACAAACTTAGCGGAGCTGCACTTCAGAGAGTCCCACTGTAATCTGTTAATAGAATCTGCTTTAAATGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTTAGTTGTGCTTGTGTaGCACAAATACTCATGCATA +
Preference number: 3 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLVVLV*HKYSCI
Trigger: TATGCATGAGTATTTGTGCAACACAAGCACAACTAA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGATGATGAGAGTCATTaGATGTTAGAAAGTGTTGTG +
Preference number: 3 (lower is better)
Translates to: NMSKAPISHHSALVPAKFDDESH*MLESVV
Trigger: CACAACACTTTCTAACATCAAATGACTCTCATCATC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCAACACAATAATCATTaGACCAAAGTGAGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: NMSKAPISHHSALVPAKFQHNNH*TKVSFR
Trigger: CCTGAAACTCACTTTGGTCAAATGATTATTGTGTTG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAGACCCCCAAAGTCTTaGACAGTACTTCCAGTGACA +
Preference number: 3 (lower is better)
Translates to: EMAHAKPINQHANWQKHLRPPKS*TVLPVT
Trigger: TGTCACTGGAAGTACTGTCAAAGACTTTGGGGGTCT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGGGTATCTCTCTATCTaGAGGCCATTACAGTCAGGT +
Preference number: 3 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFGYLSI*RPLQSG
Trigger: ACCTGACTGTAATGGCCTCAAGATAGAGAGATACCC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCCCTTCGTTTTTCTTTaGAAAATTGGTATGTCAGGT +
Preference number: 3 (lower is better)
Translates to: NMSKAPISHHSALVPAKFPFVFL*KIGMSG
Trigger: ACCTGACATACCAATTTTCAAAAGAAAAACGAAGGG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCATTCCAACAAATGGTTaGGATAAGAGAGCCAGTTTT +
Preference number: 3 (lower is better)
Translates to: NMSKAPISHHSALVPAKFIPTNG*DKRASF
Trigger: AAAACTGGCTCTCTTATCCAAACCATTTGTTGGAAT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGATGATGAGAGTCATTaGATGTTAGAAAGTGTTGTG +
Preference number: 3 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTDDESH*MLESVV
Trigger: CACAACACTTTCTAACATCAAATGACTCTCATCATC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTTCAAGTACTGTGTGTaGTCCTTAGTTCCACAACAA +
Preference number: 3 (lower is better)
Translates to: SLINSEENLALPLFSYEPFKYCV*SLVPQQ
Trigger: TTGTTGTGGAACTAAGGACAACACACAGTACTTGAA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGGAGCTTCAGTTACCTaGTTGGGTTGTTACAGACAT +
Preference number: 3 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFGASVT*LGCYRH
Trigger: ATGTCTGTAACAACCCAACAAGGTAACTGAAGCTCC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCTACCTGGACCTCACTaGATAACTCCACTCAAACTA +
Preference number: 3 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFLPGPH*ITPLKL
Trigger: TAGTTTGAGTGGAGTTATCAAGTGAGGTCCAGGTAG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTCAGATCAGTTCATTTTaGATAGTGGGTAGAAGGACT +
Preference number: 3 (lower is better)
Translates to: SLINSEENLALPLFSYEPQISSF*IVGRRT
Trigger: AGTCCTTCTACCCACTATCAAAAATGAACTGATCTG...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAATTAGGATGATGGTATaGCCATGTGCTATCAAGAAA +
Preference number: 3 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSIRMMV*PCAIKK
Trigger: TTTCTTGATAGCACATGGCAATACCATCATCCTAAT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCAACACAATAATCATTaGACCAAAGTGAGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKQHNNH*TKVSFR
Trigger: CCTGAAACTCACTTTGGTCAAATGATTATTGTGTTG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTACCACGAACACTCCTTTaGCAGTGTTTAATTTCCTGT +
Preference number: 3 (lower is better)
Translates to: EMAHAKPINQHANWQKHLPRTLL*QCLISC
Trigger: ACAGGAAATTAAACACTGCAAAAGGAGTGTTCGTGG...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAACATCAGTGCATATTTaGGAAGCCACTTCATTTCAT +
Preference number: 3 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSTSVHI*EATSFH
Trigger: ATGAAATGAAGTGGCTTCCAAAATATGCACTGATGT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCATTCCCCCAAAATGAATaGGTTGGAATAGATACAACT +
Preference number: 3 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSFPQNE*VGIDTT
Trigger: AGTTGTATCTATTCCAACCAATTCATTTTGGGGGAA...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTATAAGAATCAAAATTaGGTTCCCATTGTGGGAGCT +
Preference number: 3 (lower is better)
Translates to: SLINSEENLALPLFSYEPYKNQN*VPIVGA
Trigger: AGCTCCCACAATGGGAACCAAATTTTGATTCTTATA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp CTCCTACAGATATCATCCAATTGCCTTTATTACCTGTaGTACACATACACACATGCACACACACGCAATAAA +
Preference number: 3 (lower is better)
Translates to: LLQISSNCLYYL*YTYTHAHTRNK
Trigger: TTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACAGGTAATAAAGGCAATTGGATGATATCTGTAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 72 bp TGCCTTCTGAGTGAACCAATGATTGCCAAAATGATGTaGAATTCCATTGGGACAATTAGTAGTAGCATTTTC +
Preference number: 3 (lower is better)
Translates to: CLLSEPMIAKMM*NSIGTISSSIF
Trigger: GAAAATGCTACTACTAATTGTCCCAATGGAATTGCACATCATTTTGGCAATCATTGGTTCACTCAGAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CCA 72 bp TCTGAAACCTTAACTCTGGAGCTTCAGTTACCTTGTTaGGTTGTTACAGACATCATAAAAATGACACAGCTA +
Preference number: 3 (lower is better)
Translates to: SETLTLELQLPC*VVTDIIKMTQL
Trigger: TAGCTGTGTCATTTTTATGATGTCTGTAACAACCCAACAAGGTAACTGAAGCTCCAGAGTTAAGGTTTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTTCCAAACTTATGCCATaGGGCCAGATCTTTTTCTAC +
Preference number: 3 (lower is better)
Translates to: TKITKFLQPTQRFLILQTSKLMP*GQIFFY
Trigger: GTAGAAAAAGATCTGGCCCAATGGCATAAGTTTGGA...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTACAGATCAGTTCATTTTaGATAGTGGGTAGAAGGACT +
Preference number: 3 (lower is better)
Translates to: EMAHAKPINQHANWQKHLQISSF*IVGRRT
Trigger: AGTCCTTCTACCCACTATCAAAAATGAACTGATCTG...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp GACAAGGAAACATTAGCTGAGTCTGTCATCCTAGTGTaGAGGCGAGAATTACAAAAATTCAGAAAGATATTC +
Preference number: 3 (lower is better)
Translates to: DKETLAESVILV*RRELQKFRKIF
Trigger: GAATATCTTTCTGAATTTTTGTAATTCTCGCCTTCACACTAGGATGACAGACTCAGCTAATGTTTCCTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp TCACCAGATACTTGTTCTACAACATTATTGCCCCCTTaGAAATTTTTGTGGCATAAAGTACAAGCTGTAGCA +
Preference number: 3 (lower is better)
Translates to: SPDTCSTTLLPP*KFLWHKVQAVA
Trigger: TGCTACAGCTTGTACTTTATGCCACAAAAATTTTCAAGGGGGCAATAATGTTGTAGAACAAGTATCTGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp TTCACATTCCCCAGTAATATGCAAAGCATGTGGCTATaGATGAGTACACAACTTACTGTATTCTTAAGATGG +
Preference number: 3 (lower is better)
Translates to: FTFPSNMQSMWL*MSTQLTVFLRW
Trigger: CCATCTTAAGAATACAGTAAGTTGTGTACTCATTCATAGCCACATGCTTTGCATATTACTGGGGAATGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 72 bp GTAATTTCATTGGGTGTCACTTGTTATTCATCAATGTaGAACAAACTGACCCAAGTCATCAAGTGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: VISLGVTCYSSM*NKLTQVIKCLN
Trigger: ATTCAAGCACTTGATGACTTGGGTCAGTTTGTTGCACATTGATGAATAACAAGTGACACCCAATGAAATTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGTGATTCCCCATTCATaGTATCCACTCAATACTACT +
Preference number: 3 (lower is better)
Translates to: TKITKFLQPTQRFLILQTVIPHS*YPLNTT
Trigger: AGTAGTATTGAGTGGATACAATGAATGGGGAATCAC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTATAAGAATCAAAATTaGGTTCCCATTGTGGGAGCT +
Preference number: 3 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFYKNQN*VPIVGA
Trigger: AGCTCCCACAATGGGAACCAAATTTTGATTCTTATA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCAAGAGAAACATTTTTaGAACATTAGGAAGCCGGGA +
Preference number: 3 (lower is better)
Translates to: TKITKFLQPTQRFLILQTQEKHF*NIRKPG
Trigger: TCCCGGCTTCCTAATGTTCAAAAAATGTTTCTCTTG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGTACTCACCAGATACTaGTTCTACAACATTATTGCC +
Preference number: 3 (lower is better)
Translates to: TKITKFLQPTQRFLILQTVLTRY*FYNIIA
Trigger: GGCAATAATGTTGTAGAACAAGTATCTGGTGAGTAC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCACATCAGTGCATATTTaGGAAGCCACTTCATTTCAT +
Preference number: 3 (lower is better)
Translates to: EKESPFQRIQQDENNRHFTSVHI*EATSFH
Trigger: ATGAAATGAAGTGGCTTCCAAAATATGCACTGATGT...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR GCA 72 bp ACATACTTAGTTGTGCTTGTGTTGCACAAATACTCATaGATACGGAGTCAATATAAACTGGCACATATAGAT +
Preference number: 3 (lower is better)
Translates to: TYLVVLVLHKYS*IRSQYKLAHID
Trigger: ATCTATATGTGCCAGTTTATATTGACTCCGTATGCATGAGTATTTGTGCAACACAAGCACAACTAAGTATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp CAAACAAATAAGCTCTGTGTTTGCATCACAAGGCTGTaGTTATTAAAGTTTAAGACTCTATTCTTTCAGCAG +
Preference number: 3 (lower is better)
Translates to: QTNKLCVCITRL*LLKFKTLFFQQ
Trigger: CTGCTGAAAGAATAGAGTCTTAAACTTTAATAATCACAGCCTTGTGATGCAAACACAGAGCTTATTTGTTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR TCA 72 bp TCAAAATACAAATTTCTTTGCCCTGCTTCAAGTTTCTaGATCAGACTCTTTGAAGTTAGGTTGAAGGAATCT +
Preference number: 3 (lower is better)
Translates to: SKYKFLCPASSF*IRLFEVRLKES
Trigger: AGATTCCTTCAACCTAACTTCAAAGAGTCTGATTCAGAAACTTGAAGCAGGGCAAAGAAATTTGTATTTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAGGGAGGTCTAGGCCCTaGCATCGTGTGCGTCATGTG +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAGRSRP*HRVRHV
Trigger: CACATGACGCACACGATGCCAGGGCCTAGACCTCCC...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCTCTGGCGGCGGAGCTaGGTGGTTCCACAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGLWRRS*VVPQFP
Trigger: TGGGAACTGTGGAACCACCCAGCTCCGCCGCCAGAG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCTGCCTGTCCCTCTCTaGCCAAGGTGCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGLPVPL*PRCRIL
Trigger: GAGGATCCTGCACCTTGGGCAGAGAGGGACAGGCAG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCACCGAAACTTGGCATCTaGCTGTCCCTCTCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAPKLGI*LSLSAQ
Trigger: TTGGGCAGAGAGGGACAGGCAGATGCCAAGTTTCGG...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAATTCTAAGAGAGGGCTaGTGGGAGCAGGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAILREG*WEQEHS
Trigger: GCTGTGCTCCTGCTCCCAGCAGCCCTCTCTTAGAAT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATTACCATGGGATGAGTaGCAGTCGAGAGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKALPWDE*QSRGGP
Trigger: TGGGCCACCTCTCGACTGGCACTCATCCCATGGTAA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCACCTTTTTCTGGAAAGTaGTCAGGCAGGACCACCTGC +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAPFSGK*SGRTTC
Trigger: GCAGGTGGTCCTGCCTGATCACTTTCCAGAAAAAGG...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAGGTCATTGCAAGACGTaGCGCTCTCCCCTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAGHCKT*RSPLLC
Trigger: ACAAAGAAGGGGAGAGCGGCACGTCTTGCAATGACC...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGGGCTCCGGCTTCTCTaGCGGCGGAGCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPGLRLL*RRSWVV
Trigger: AACCACCCAGCTCCGCCGCCAGAGAAGCCGGAGCCC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCGCATCTCTGACTGTTaGATCAGCTGGACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGRISDC*ISWTGP
Trigger: GGGCCCTGTCCAGCTGATCCAACAGTCAGAGATGCG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCACCACCTGCCTGTCCCTaGGATAGTCCAGAATATAAC +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAPPACP*DSPEYN
Trigger: GTTATATTCTGGACTATCTCAGGGACAGGCAGGTGG...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGGACAGGGCCCTTCTTaGTGGGACGGTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFGQGPS*WDGPES
Trigger: AGACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTTTCCGCCGCATCTCTaGCTGTTGGATCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGFPPHL*LLDQLD
Trigger: GTCCAGCTGATCCAACAGTCAGAGATGCGGCGGAAA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAACTCATTTCCAGTGTTaGAGGCTACCTGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKATHFQC*RLPGPH
Trigger: GTGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAATGCAAAACCACTCCTaGTTGAGAGCCACGGCCTTA +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAMQNHS*LRATAL
Trigger: TAAGGCCGTGGCTCTCAACCAGGAGTGGTTTTGCAT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 72 bp GGATCTGTGCTAGGACTATCAGTTGAAGGCATGGGCTaGTGTGCATACAAACTGATCCCAAGGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSVLGLSVEGMG*CAYKLIPRSSR
Trigger: CCTGCTGCTCCTTGGGATCAGTTTGTATGCACACAAGCCCATGCCTTCAACTGATAGTCCTAGCACAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAGGGGCTCTACACATGTaGTTCCCCATTCATTGTATC +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAGALHM*FPIHCI
Trigger: GATACAATGAATGGGGAATCACATGTGTAGAGCCCC...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGCTAGGACTATCAGTTaGAGGCATGGGCTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGARTIS*RHGLVC
Trigger: GCACACAAGCCCATGCCTTCAACTGATAGTCCTAGC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAGGAGGGAATGAGGGATaGTTATCAATGTGGAATGGC +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAGGNEG*LSMWNG
Trigger: GCCATTCCACATTGATAAGCATCCCTCATTCCCTCC...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCATCTCCTGGGGAGAGCTaGCCTCAGACTGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSSPGES*PQTGCR
Trigger: GCGACAGCCAGTCTGAGGCCAGCTCTCCCCAGGAGA...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTCTCCTGGGGAGAGCTaGCCTCAGACTGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPSPGES*PQTGCR
Trigger: GCGACAGCCAGTCTGAGGCCAGCTCTCCCCAGGAGA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACAGATGACCGTCTCCTaGGGAGAGCTGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTQMTVS*GELASD
Trigger: GTCTGAGGCCAGCTCTCCCCAGGAGACGGTCATCTG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGGACGGTCCAGAGTCTaGATGTTGGTCTGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFGRSRV*MLVWRV
Trigger: GACACGCCAGACCAACATCCAGACTCTGGACCGTCC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGACTGTTGGATCAGCTaGACAGGGCCCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGDCWIS*TGPFLM
Trigger: CATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTCACGGGACCACAGATaGCCGTCTCCTGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSASRDHR*PSPGES
Trigger: GCTCTCCCCAGGAGACGGTCATCTGTGGTCCCGTGA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGGTAGCCACCCCACCTaGCGGCAAGGGCAAACGGAC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFGSHPT*RQGQTD
Trigger: GTCCGTTTGCCCTTGCCGGCAGGTGGGGTGGCTACC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACTGCCTGTCCCTCTCTaGCCAAGGTGCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSLPVPL*PRCRIL
Trigger: GAGGATCCTGCACCTTGGGCAGAGAGGGACAGGCAG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGGCGGCGGAGCTGGGTaGTTCCACAGTTCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLGGGAG*FHSSQC
Trigger: GCACTGGGAACTGTGGAACCACCCAGCTCCGCCGCC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTATGTTCCCAGCCAGGTaGGAGCCGGTGCGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAMFPAR*EPVRAR
Trigger: TCTGGCTCGCACCGGCTCCCACCTGGCTGGGAACAT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR CCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAAGCCGTGTCTCTCTTTaGGGAAAACATTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKASRVSL*GKHFPQ
Trigger: CTGTGGAAAATGTTTTCCCCAAAGAGAGACACGGCT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACCAGAGTCTGGATGTTaGTCTGGCGTGTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTPESGC*SGVSRD
Trigger: GTCCCGTGACACGCCAGACCAACATCCAGACTCTGG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGGGAGGTCTAGGCCCTaGCATCGTGTGCGTCATGTG +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSGRSRP*HRVRHV
Trigger: CACATGACGCACACGATGCCAGGGCCTAGACCTCCC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCGGGGGTCAGGAGTTTaGCCAAGTCTGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSARGSGV*PSLGAG
Trigger: TCCAGCTCCCAGACTTGGTCAAACTCCTGACCCCCG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCATCTGGGCTTTGCTTaGTTTCATCGGGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFHLGFA*FHRGSG
Trigger: TCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTCACGGGACCACAGATaGCCGTCTCCTGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFSRDHR*PSPGES
Trigger: GCTCTCCCCAGGAGACGGTCATCTGTGGTCCCGTGA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTCCATCAAGCTCACATaGAAGGCAGGCCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFSIKLT*KAGQFP
Trigger: GGGGAATTGGCCTGCCTTGCATGTGAGCTTGATGGA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGAAGGAGTTGGGAACTaGGGACCCTTGTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTEGVGN*GPLFSR
Trigger: CCTCGAGAACAAGGGTCCGCAGTTCCCAACTCCTTC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCACTTCTTTGTCACCTTTaGCATTCTTGCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKALLCHL*HSCSSN
Trigger: ATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAG...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTCTCACTCAGAGATATaGTCCCATCTACCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGSHSEI*SHLPRA
Trigger: AGCTCTGGGTAGATGGGAGCATATCTCTGAGTGAGA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAAAAGGTGCAATCCAATaGAGTCACAGCCTTATCCTT +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAKGAIQ*SHSLIL
Trigger: AAGGATAAGGCTGTGACTCCATTGGATTGCACCTTT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGAGCTGGCCTCAGACTaGCTGTCGCAGCTAGATGTG +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPELASD*LSQLDV
Trigger: CACATCTAGCTGCGACAGCCAGTCTGAGGCCAGCTC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCCAGAGTCTGGATGTTaGTCTGGCGTGTCACGGGAC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKPESGC*SGVSRD
Trigger: GTCCCGTGACACGCCAGACCAACATCCAGACTCTGG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGGACGGTCCAGAGTCTaGATGTTGGTCTGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPGRSRV*MLVWRV
Trigger: GACACGCCAGACCAACATCCAGACTCTGGACCGTCC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCAGCTCCTCCTCAATTaGGAGCTTTTCTTTAACAGC +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGQLLLN*ELFFNS
Trigger: GCTGTTAAAGAAAAGCTCTCAATTGAGGAGGAGCTG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCAGGGTAGAGAAGGCTaGGTGTGGAGTCATTTAGCA +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFQGREG*VWSHLA
Trigger: TGCTAAATGACTCCACACTCAGCCTTCTCTACCCTG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCATGCCCGAGTCACAGTaGCTACCAGAGTTACTAGAG +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFMPESQ*LPELLE
Trigger: CTCTAGTAACTCTGGTAGTCACTGTGACTCGGGCAT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAGAAAGTAAGAGAAAATaGGGAAGTGCTTCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAESKRK*GSASKE
Trigger: CTCCTTAGAAGCACTTCCTCATTTTCTCTTACTTTC...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGCTACTTTATCTTTCTaGGCCTCACTGACCTCATCT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGATLSF*ASLTSS
Trigger: AGATGAGGTCAGTGAGGCTCAGAAAGATAAAGTAGC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCACATCAAGTGCTTGAATaGCGTCAGGAAAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAHQVLE*RQEKVT
Trigger: TGTTACTTTTTCCTGACGTCATTCAAGCACTTGATG...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATTTCATTGTGGAACTTaGCTGAAATACACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAFHCGT*LKYTEL
Trigger: CAGCTCTGTGTATTTCAGTCAAGTTCCACAATGAAA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR GCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAAAAGATGGAGAGATGTaGCCTGCTAGGGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTKDGEM*PARVPG
Trigger: ACCTGGGACCCTAGCAGGGCACATCTCTCCATCTTT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCCTCTCTGCCCAAGGTaGAGGATCCTCTGTAACCCA +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKPLCPR*RILCNP
Trigger: TGGGTTACAGAGGATCCTGCACCTTGGGCAGAGAGG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACCGAAACTTGGCATCTaGCTGTCCCTCTCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSPKLGI*LSLSAQ
Trigger: TTGGGCAGAGAGGGACAGGCAGATGCCAAGTTTCGG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGGGTCAGAGGAACACTaGCACGAACACTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTGSEEH*HEHSFC
Trigger: GCAAAAGGAGTGTTCGTGGCAGTGTTCCTCTGACCC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTAGCACAGCAAGCAATTaGAGGTGTCATTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGSTASN*RCHFLQ
Trigger: CTGGAGAAAATGACACCTGCAATTGCTTGCTGTGCT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCATCTTAAAGGAATATaGCTTGGAGAAAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGHLKGI*LGESGG
Trigger: GCCTCCGCTTTCTCCAAGCCATATTCCTTTAAGATG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCAGTCTTCCTTTTTCTaGAAAGTGATCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGQSSFF*KVIRQD
Trigger: GTCCTGCCTGATCACTTTCCAGAAAAAGGAAGACTG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGAACTCTCCGAAACTTaGCATCTGCCTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTELSET*HLPVPL
Trigger: GAGAGGGACAGGCAGATGCCAAGTTTCGGAGAGTTC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGGAGGTGTATCTTTCTaGGGCTCGATCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTGGVSF*GSIRVS
Trigger: AGAGACCCTGATCGAGCCCCAGAAAGATACACCTCC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGTCTGGATGTTGGTCTaGCGTGTCACGGGACCACAG +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAVWMLV*RVTGPQ
Trigger: CTGTGGTCCCGTGACACGCCAGACCAACATCCAGAC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAACACAGAACTTAATGTaGATTATGTGGAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKATQNLM*IMWKGH
Trigger: GTGGCCTTTCCACATAATCCACATTAAGTTCTGTGT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTCTCCCAAAGCTCACTaGATTTTAGTATCGCGGGAT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGSPKAH*ILVSRD
Trigger: ATCCCGCGATACTAAAATCCAGTGAGCTTTGGGAGA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACACCTGACAGATCTCTaGGAGGAGGGATCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTHLTDL*EEGSVL
Trigger: TAGCACAGATCCCTCCTCCCAGAGATCTGTCAGGTG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCGGGGGTCAGGAGTTTaGCCAAGTCTGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFRGSGV*PSLGAG
Trigger: TCCAGCTCCCAGACTTGGTCAAACTCCTGACCCCCG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACATCTGGGCTTTGCTTaGTTTCATCGGGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSHLGFA*FHRGSG
Trigger: TCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTTTCCGCCGCATCTCTaGCTGTTGGATCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAFPPHL*LLDQLD
Trigger: GTCCAGCTGATCCAACAGTCAGAGATGCGGCGGAAA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAACCGATCTGGAATTTTaGTTTTTAGGAAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKATDLEF*FLGNPG
Trigger: TCCAGGATTTCCTAAAAATCAAAATTCCAGATCGGT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCCAGTTTGGGATAAATaGCTCCCAAGGCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKPVWDK*LPRPLS
Trigger: GCTGAGAGGCCTTGGGAGTCATTTATCCCAAACTGG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCACATTACAGTCAGGTCTaGAATTTAAGGAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAHYSQV*NLRKLE
Trigger: TTCCAACTTCCTTAAATTTCAGACCTGACTGTAATG...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAGGTCAATTGGATCATTaGAACCCTTTTGAATTCACT +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAGQLDH*NPFEFT
Trigger: AGTGAATTCAAAAGGGTTTCAATGATCCAATTGACC...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAATGCACGTATTTCGGTaGAGTTTCTTTTCTAAAGCT +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAMHVFR*SFFSKA
Trigger: AGCTTTAGAAAAGAAACTTCACCGAAATACGTGCAT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTACAGTGGGACTCTCTaGAGTGCAGCTCCGCTAAGT +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKYSGTL*SAAPLS
Trigger: ACTTAGCGGAGCTGCACTTCAGAGAGTCCCACTGTA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTTCCACAGTTCCCAGTaGAGTTCGGATGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFFHSSQ*SSDAVV
Trigger: AACAACAGCATCCGAACTGCACTGGGAACTGTGGAA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACACCTTTGCCATTCTTaGAGCAGCAATCGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTHLCHS*SSNRSV
Trigger: CACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTAGGAAAATCTGGCTCTaGCACTTTTTAGCTATGAGC +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGRKIWL*HFLAMS
Trigger: GCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTTAGGTTCGACCCAGTaGTCTGGTTTTGAAAGACAT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGLGSTQ*SGFERH
Trigger: ATGTCTTTCAAAACCAGAGCACTGGGTCGAACCTAA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTACCCAAGTCATCAAGTaGTTGAATGACGTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGTQVIK*LNDVRK
Trigger: TTTCCTGACGTCATTCAAGCACTTGATGACTTGGGT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGTGAGGGTGACCATCTaGAAGGCTCACGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSVRVTI*KAHGRR
Trigger: TCTTCTACCGTGAGCCTTCCAGATGGTCACCCTCAC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCTCAGAGCCTTTTACTaGCCAGGTCTATGTTCATTT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGLRAFY*PGLCSF
Trigger: AAATGAACATAGACCTGGCCAGTAAAAGGCTCTGAG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGAAGGCAATCTAAGTTaGGGCTCTACACATGTGATT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGEGNLS*GSTHVI
Trigger: AATCACATGTGTAGAGCCCCAACTTAGATTGCCTTC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAATAAGAATCAAAATTTaGTTCCCATTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAIRIKI*FPLWEL
Trigger: CAGCTCCCACAATGGGAACCAAATTTTGATTCTTAT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAAACCAGCATGCAAATTaGCAAAAACATTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKANQHAN*QKHLSA
Trigger: GGCAGATAAATGTTTTTGCCAATTTGCATGCTGGTT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTCTGAGAGCACTTTGTaGTCTACTGTTGATCAGCTT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGSESTL*STVDQL
Trigger: AAGCTGATCAACAGTAGACCACAAAGTGCTCTCAGA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCTTGGGAGCCACCCCTaGGTGAGTCTAGGAAACATA +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKLGSHP*VSLGNI
Trigger: TATGTTTCCTAGACTCACCCAGGGGTGGCTCCCAAG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTATCAGTTGAAGGCATaGGCTTGTGTGCATACAAAC +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGYQLKA*ACVHTN
Trigger: GTTTGTATGCACACAAGCCCATGCCTTCAACTGATA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATGTCAGGTTTCATTGTaGAACTTGACTGAAATACAC +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKACQVSL*NLTEIH
Trigger: GTGTATTTCAGTCAAGTTCCACAATGAAACCTGACA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCCACCTGCCTGTCCCTaGGATAGTCCAGAATATAAC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKPPACP*DSPEYN
Trigger: GTTATATTCTGGACTATCTCAGGGACAGGCAGGTGG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCCTTTTTCTGGAAAGTaGTCAGGCAGGACCACCTGC +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAPFSGK*SGRTTC
Trigger: GCAGGTGGTCCTGCCTGATCACTTTCCAGAAAAAGG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCCAAATTCAACTTCTTaGCCCATTAAGCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGPNSTS*PIKLCD
Trigger: ATCACAGAGCTTAATGGGTCAAGAAGTTGAATTTGG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACATACCTTTAGGGAATaGTCTCCCAAAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTHTFRE*SPKAHW
Trigger: CCAGTGAGCTTTGGGAGATCATTCCCTAAAGGTATG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTATGTCAGGTGGAGGTaGCAAAGAATTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGYVRWR*QRILPK
Trigger: TTTAGGAAGAATTCTTTGTCACCTCCACCTGACATA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCTGAGGCAGAAAGACTaGAGTAGAAGAACACAAGAC +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLRQKD*SRRTQD
Trigger: GTCTTGTGTTCTTCTACTTCAGTCTTTCTGCCTCAG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGCATGTGGCTATGAATaGGTACACAACTTACTGTAT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGACGYE*VHNLLY
Trigger: ATACAGTAAGTTGTGTACTCATTCATAGCCACATGC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTATTAATGAGAGATTTTaGCATCCGCCACCCATGATT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGINERF*HPPPMI
Trigger: AATCATGGGTGGCGGATGTCAAAATCTCTCATTAAT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTAATTTCCAGGTAACCTaGTCAACAGGGTCTTTAACT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGNFQVT*STGSLT
Trigger: AGTTAAAGACCCTGTTGATCAGGTTACCTGGAAATT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCTGCAGACTTTTTGCTaGATAACTGAGCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLQTFC*ITELLR
Trigger: TCTCAGCAGCTCAGTTATTCAGCAAAAAGTCTGCAG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCCAGTGCAGTTCGGATaGTGTTGTTTCAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKPVQFG*CCFSSA
Trigger: TGCACTGCTGAAACAACAGCATCCGAACTGCACTGG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTCCATCAAGCTCACATaGAAGGCAGGCCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSASIKLT*KAGQFP
Trigger: GGGGAATTGGCCTGCCTTGCATGTGAGCTTGATGGA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGAAGGAGTTGGGAACTaGGGACCCTTGTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLEGVGN*GPLFSR
Trigger: CCTCGAGAACAAGGGTCCGCAGTTCCCAACTCCTTC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCCTCTCTGCCCAAGGTaGAGGATCCTCTGTAACCCA +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFPLCPR*RILCNP
Trigger: TGGGTTACAGAGGATCCTGCACCTTGGGCAGAGAGG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTCACCTTTGCCATTCTTaGAGCAGCAATCGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPHLCHS*SSNRSV
Trigger: CACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTG...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCATGTGGAGAGGTCATTaGAAGACGTGCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFMWRGH*KTCRSP
Trigger: GGGAGAGCGGCACGTCTTGCAATGACCTCTCCACAT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAATTCTAAGAGAGGGCTaGTGGGAGCAGGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLILREG*WEQEHS
Trigger: GCTGTGCTCCTGCTCCCAGCAGCCCTCTCTTAGAAT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATTACCATGGGATGAGTaGCAGTCGAGAGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLLPWDE*QSRGGP
Trigger: TGGGCCACCTCTCGACTGGCACTCATCCCATGGTAA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAACTCACACAAATAAATaGCATGCTGTTGTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: MTQLNPSMGTAKARIPKATHTNK*HAVVLV
Trigger: AACTAAGACAACAGCATGGCATTTATTTGTGTGAGT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAACTCATTTCCAGTGTTaGAGGCTACCTGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSTHFQC*RLPGPH
Trigger: GTGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAAACTTCAGGGAAACATaGCCGAGTCACAGTGACTAC +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTNFRET*PSHSDY
Trigger: GTAGTCACTGTGACTCGGGCATGTTTCCCTGAAGTT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTGGGACTCTCTGAAGTaGAGCTCCGCTAAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPWDSLK*SSAKFV
Trigger: CACAAACTTAGCGGAGCTGCACTTCAGAGAGTCCCA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATTACAGGCCACCATGTaGAATCCACACTCTGACAAC +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTLQATM*NPHSDN
Trigger: GTTGTCAGAGTGTGGATTCCACATGGTGGCCTGTAA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGTCTGGATGTTGGTCTaGCGTGTCACGGGACCACAG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTVWMLV*RVTGPQ
Trigger: CTGTGGTCCCGTGACACGCCAGACCAACATCCAGAC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGACTGTTGGATCAGCTaGACAGGGCCCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSADCWIS*TGPFLM
Trigger: CATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCGCATCTCTGACTGTTaGATCAGCTGGACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFRISDC*ISWTGP
Trigger: GGGCCCTGTCCAGCTGATCCAACAGTCAGAGATGCG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTCATGTTCGATTCCCTaGAGCCTGAAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPSCSIP*SLKSES
Trigger: GGACTCTGACTTCAGGCTCCAGGGAATCGAACATGA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGGTGTTGCAGGCTACCTaGACCTCACTTGATAACTCC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKVLQAT*TSLDNS
Trigger: GGAGTTATCAAGTGAGGTCCAGGTAGCCTGCAACAC...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCCAGCAGGTTTCATTTaGTCTAATTTCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGPAGFI*SNFSAD
Trigger: ATCTGCAGAGAAATTAGACCAAATGAAACCTGCTGG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGGAAGGATGTCAGGCTaGGATCTCACCTTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSGRMSG*DLTLFS
Trigger: GCTAAACAAGGTGAGATCCCAGCCTGACATCCTTCC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCATTTTCTCCAGACGTaGAAGCTAGCTTATCACGGT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFHFLQT*KLAYHG
Trigger: ACCGTGATAAGCTAGCTTCCACGTCTGGAGAAAATG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCACCTGACAGATCTCTaGGAGGAGGGATCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAHLTDL*EEGSVL
Trigger: TAGCACAGATCCCTCCTCCCAGAGATCTGTCAGGTG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 72 bp TCTTATAACTCACTTACCCAGAACTCATTTCCAGTGTaGCAGGCTACCTGGACCTCACTTGATAACTCCACT +
Preference number: 4 (lower is better)
Translates to: SYNSLTQNSFPV*QATWTSLDNST
Trigger: AGTGGAGTTATCAAGTGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGTTCTGGGTAAGTGAGTTATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 72 bp TTTAGTATCGCGGGATTTCCCAGAAGGCAATCTAAGTaGGGGCTCTACACATGTGATTCCCCATTCATTGTA +
Preference number: 4 (lower is better)
Translates to: FSIAGFPRRQSK*GLYTCDSPFIV
Trigger: TACAATGAATGGGGAATCACATGTGTAGAGCCCCAACTTAGATTGCCTTCTGGGAAATCCCGCGATACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTTCCACAGGAGGGAATaGGGGATGCTTATCAATGTG +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPFHRRE*GMLINV
Trigger: CACATTGATAAGCATCCCTCATTCCCTCCTGTGGAA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCAGATGCTGTCACCGATaGGTTACAGGCCACCATGTG +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFRCCHR*VTGHHV
Trigger: CACATGGTGGCCTGTAACTCATCGGTGACAGCATCT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAACACAAGGAATGTTTaGCCAGCTCTCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPNTRNV*PALLIL
Trigger: GAGGATGAGGAGAGCTGGTCAAACATTCCTTGTGTT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACAAGGAAACATTAGCTaGGTCTGTCATCCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTQGNIS*VCHPSV
Trigger: CACACTAGGATGACAGACTCAGCTAATGTTTCCTTG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACATACCTTTAGGGAATaGTCTCCCAAAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSHTFRE*SPKAHW
Trigger: CCAGTGAGCTTTGGGAGATCATTCCCTAAAGGTATG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTACAGTGGGACTCTCTaGAGTGCAGCTCCGCTAAGT +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFYSGTL*SAAPLS
Trigger: ACTTAGCGGAGCTGCACTTCAGAGAGTCCCACTGTA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAATTGTGGAACTTGACTaGAATACACAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTIVELD*NTQSCQ
Trigger: CTGGCAGCTCTGTGTATTTCAGTCAAGTTCCACAAT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR GCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGTCCGTCTTAGTGAGTaGTGGAGACCCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAVRLSE*WRPSSC
Trigger: ACAAGAACTGGGTCTCCAGCACTCACTAAGACGGAC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAAATTCATCTGGGCTTTaGTTGATTTCATCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTNSSGL*LISSGV
Trigger: GACCCCCGATGAAATCAAGCAAAGCCCAGATGAATT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGGTCATTGCAAGACGTaGCGCTCTCCCCTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFGHCKT*RSPLLC
Trigger: ACAAAGAAGGGGAGAGCGGCACGTCTTGCAATGACC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTATGTGGAGAGGTCATTaGAAGACGTGCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTMWRGH*KTCRSP
Trigger: GGGAGAGCGGCACGTCTTGCAATGACCTCTCCACAT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGGCCCTGGCATCGTGTaGGTCATGTGTATATACATA +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPGPGIV*VMCIYI
Trigger: TATGTATATACACATGACGCACACGATGCCAGGGCC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGGAACTCTTGGCCTCTaGATATTCCCTAAACAGCAG +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSGTLGL*IFPKQQ
Trigger: CTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTCAAAGGCTTTTTCCATaGACTCGGATAGCACTCCCA +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPQRLFP*TRIALP
Trigger: TGGGAGTGCTATCCGAGTGCATGGAAAAAGCCTTTG...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTAAAAGGATCCCAGAGTaGTTCACAACAAACACATTT +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGKRIPE*FTTNTF
Trigger: AAATGTGTTTGTTGTGAAGCACTCTGGGATCCTTTT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCATGAAATCATTGGCCTaGTCAAAACACTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFMKSLA*SKHFLP
Trigger: GGGGAGAAAGTGTTTTGAGCAGGCCAATGATTTCAT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTACTTCTCCTGAAGCTTaGCCTAGTGACCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSATSPEA*PSDLCA
Trigger: TGCACACAGGTCACTAGGGCAAGCTTCAGGAGAAGT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTTAGGTTCGACCCAGTaGTCTGGTTTTGAAAGACAT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLGSTQ*SGFERH
Trigger: ATGTCTTTCAAAACCAGAGCACTGGGTCGAACCTAA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACCATCTATAGGCGGTTaGCTTCTGAGTGAACCAATG +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSPSIGG*LLSEPM
Trigger: CATTGGTTCACTCAGAAGGCAACCGCCTATAGATGG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTTAAACCCTGGATGGTaGATGGTAGTGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKLNPGW*MVVSCY
Trigger: GTAGCAGCTCACTACCATCCACCATCCAGGGTTTAA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCATTAAACCCTGGATGGTaGATGGTAGTGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSLNPGW*MVVSCY
Trigger: GTAGCAGCTCACTACCATCCACCATCCAGGGTTTAA...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAAGTTTAAACCCTGGATaGTGGATGGTAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSSLNPG*WMVVSC
Trigger: GCAGCTCACTACCATCCACCATCCAGGGTTTAAACT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAACCAAGTCTGGGAGCTaGAAGTATTCAGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSTKSGS*KYSASL
Trigger: AAGGGAAGCTGAATACTTCCAGCTCCCAGACTTGGT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGAGTTTGACCAAGTCTaGGAGCTGGAAGTATTCAGC +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPEFDQV*ELEVFS
Trigger: GCTGAATACTTCCAGCTCCCAGACTTGGTCAAACTC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGAACTCTCCGAAACTTaGCATCTGCCTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFELSET*HLPVPL
Trigger: GAGAGGGACAGGCAGATGCCAAGTTTCGGAGAGTTC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTTACAGGCCACCATGTaGAATCCACACTCTGACAAC +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPLQATM*NPHSDN
Trigger: GTTGTCAGAGTGTGGATTCCACATGGTGGCCTGTAA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGTGAGGGTGACCATCTaGAAGGCTCACGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLVRVTI*KAHGRR
Trigger: TCTTCTACCGTGAGCCTTCCAGATGGTCACCCTCAC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCTCAGAGCCTTTTACTaGCCAGGTCTATGTTCATTT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLRAFY*PGLCSF
Trigger: AAATGAACATAGACCTGGCCAGTAAAAGGCTCTGAG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATCTCCCAAAGCTCACTaGATTTTAGTATCGCGGGAT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTSPKAH*ILVSRD
Trigger: ATCCCGCGATACTAAAATCCAGTGAGCTTTGGGAGA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTATGCAAAACCACTCCTaGTTGAGAGCCACGGCCTTA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAMQNHS*LRATAL
Trigger: TAAGGCCGTGGCTCTCAACCAGGAGTGGTTTTGCAT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTTGGAAACAAGGACTTaGGAGCCACCCCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFLETRT*EPPLGE
Trigger: CTCACCCAGGGGTGGCTCCCAAGTCCTTGTTTCCAA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAGGCATTGTAGTTTGTaGACAGGAGAGGGGACTCCG +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLRHCSL*TGEGTP
Trigger: CGGAGTCCCCTCTCCTGTCCACAAACTACAATGCCT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGAGAGGAGGTTGGGTTaGAGAAGTAAAGCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPERRLG*RSKAEK
Trigger: TTTCTCTGCTTTACTTCTTCAACCCAACCTCCTCTC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCATAAGAGTCCACAGGTaGAGTGATGCTGAAAAAGTA +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFIRVHR*SDAEKV
Trigger: TACTTTTTCAGCATCACTTCACCTGTGGACTCTTAT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTAGATGCTGTCACCGATaGGTTACAGGCCACCATGTG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTRCCHR*VTGHHV
Trigger: CACATGGTGGCCTGTAACTCATCGGTGACAGCATCT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCCAGTTTGGGATAAATaGCTCCCAAGGCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFPVWDK*LPRPLS
Trigger: GCTGAGAGGCCTTGGGAGTCATTTATCCCAAACTGG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTGTAGCACAAGTCTATaGAAGAGCTATTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFCSTSL*KSYWYL
Trigger: AAGGTACCAATAGCTCTTTCATAGACTTGTGCTACA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCACGCACATTATCCACTaGGCTGACATAAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFTHIIH*ADINLK
Trigger: TTTTAGGTTTATGTCAGCTCAGTGGATAATGTGCGT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATTTGTGGTCTACTGTTaGTCAGCTTGGGAAACATCT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTFVVYC*SAWETS
Trigger: AGATGTTTCCCAAGCTGATCAACAGTAGACCACAAA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGTAACAATGAGATGCTaGGGGCAGTTAATCACATTT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFVTMRC*GQLITF
Trigger: AAATGTGATTAACTGCCCTCAGCATCTCATTGTTAC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCGCTAGGACTATCAGTTaGAGGCATGGGCTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFARTIS*RHGLVC
Trigger: GCACACAAGCCCATGCCTTCAACTGATAGTCCTAGC...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCAAGTCATCAAGTGCTTaGATGACGTCAGGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFKSSSA*MTSGKS
Trigger: ACTTTTTCCTGACGTCATTCAAGCACTTGATGACTT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACAAGCAACACACCTGTaGCTATGGATAAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTQATHL*LWIKIP
Trigger: AGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCAATATCTCCAGGCATTaGCAAAAGATCTCTGGTATG +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFNISRH*QKISGM
Trigger: CATACCAGAGATCTTTTGGCAATGCCTGGAGATATT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAATGAAATCATTGGCCTaGTCAAAACACTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTMKSLA*SKHFLP
Trigger: GGGGAGAAAGTGTTTTGAGCAGGCCAATGATTTCAT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCAGTAGCAAGGACTTGTaGTTAGACTTGTCACATGTT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFSSKDL*LDLSHV
Trigger: AACATGTGACAAGTCTAAGCACAAGTCCTTGCTACT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCAGTCTTCCTTTTTCTaGAAAGTGATCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKQSSFF*KVIRQD
Trigger: GTCCTGCCTGATCACTTTCCAGAAAAAGGAAGACTG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGTGGCAGAATTCATCTaGGCTTTGCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTVAEFI*ALLDFI
Trigger: GATGAAATCAAGCAAAGCCCAGATGAATTCTGCCAC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGGAGGTGTATCTTTCTaGGGCTCGATCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTGGVSF*GSIRVS
Trigger: AGAGACCCTGATCGAGCCCCAGAAAGATACACCTCC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATCATGTTCGATTCCCTaGAGCCTGAAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLSCSIP*SLKSES
Trigger: GGACTCTGACTTCAGGCTCCAGGGAATCGAACATGA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTCCAGCTTTGTTCACTaGATGTATAAGGAATGTCAG +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFSSFVH*MYKECQ
Trigger: CTGACATTCCTTATACATCCAGTGAACAAAGCTGGA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGAAGGCAATCTAAGTTaGGGCTCTACACATGTGATT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTEGNLS*GSTHVI
Trigger: AATCACATGTGTAGAGCCCCAACTTAGATTGCCTTC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTGCAATGGAGATCACTaGAAAAAGAATCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFCNGDH*KKNLHS
Trigger: GGAATGGAGATTCTTTTTCCAGTGATCTCCATTGCA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTATTGACATTGTGGGCTaGATAACTTTTTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGIDIVG*ITFCYG
Trigger: TCCATAACAAAAAGTTATCCAGCCCACAATGTCAAT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTCCTATTTATTGACCTaGAAGACTTCCCGTATATGG +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFSYLLT*KTSRIW
Trigger: CCATATACGGGAAGTCTTCCAGGTCAATAAATAGGA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCTTGGGAGCCACCCCTaGGTGAGTCTAGGAAACATA +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFLGSHP*VSLGNI
Trigger: TATGTTTCCTAGACTCACCCAGGGGTGGCTCCCAAG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGACTTGTCACATGTTTaGAAACAAGGACTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPDLSHV*KQGLGS
Trigger: GCTCCCAAGTCCTTGTTTCCAAACATGTGACAAGTC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAGTGCTTCTGTTGTGTaGGCACACCTGACAGATCTC +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLSASVV*AHLTDL
Trigger: GAGATCTGTCAGGTGTGCCCACACAACAGAAGCACT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCAGTGCTTCTGTTGTGTaGGCACACCTGACAGATCTC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFSASVV*AHLTDL
Trigger: GAGATCTGTCAGGTGTGCCCACACAACAGAAGCACT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGGACGAATTATTTTGTaGGTTAGGTTCGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSGRIIL*VRFDPV
Trigger: CACTGGGTCGAACCTAACCCACAAAATAATTCGTCC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 72 bp ACATTCACAGCATCAGAAACAGATGTCACAAGGAGCTaGATAATCCCTGGTCAGATGCACTTGAAATTTCCA +
Preference number: 4 (lower is better)
Translates to: TFTASETDVTRS*IIPGQMHLKFP
Trigger: TGGAAATTTCAAGTGCATCTGACCAGGGATTATCAAGCTCCTTGTGACATCTGTTTCTGATGCTGTGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCACCGATCTGGAATTTTaGTTTTTAGGAAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFTDLEF*FLGNPG
Trigger: TCCAGGATTTCCTAAAAATCAAAATTCCAGATCGGT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGAGAAGCTCATCCATCTaGAATATTCTAAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKRSSSI*NILREG
Trigger: GCCCTCTCTTAGAATATTTCAGATGGATGAGCTTCT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCAACACAAGGAATGTTTaGCCAGCTCTCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFNTRNV*PALLIL
Trigger: GAGGATGAGGAGAGCTGGTCAAACATTCCTTGTGTT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCAGGGTAGAGAAGGCTaGGTGTGGAGTCATTTAGCA +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTQGREG*VWSHLA
Trigger: TGCTAAATGACTCCACACTCAGCCTTCTCTACCCTG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCAAGGAAACATTAGCTaGGTCTGTCATCCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAQGNIS*VCHPSV
Trigger: CACACTAGGATGACAGACTCAGCTAATGTTTCCTTG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTATGCCCGAGTCACAGTaGCTACCAGAGTTACTAGAG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTMPESQ*LPELLE
Trigger: CTCTAGTAACTCTGGTAGTCACTGTGACTCGGGCAT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATATGTCAGGTGGAGGTaGCAAAGAATTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTYVRWR*QRILPK
Trigger: TTTAGGAAGAATTCTTTGTCACCTCCACCTGACATA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACCTGCTTCAAGTTTCTaGATCAGACTCTTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTPASSF*IRLFEV
Trigger: AACTTCAAAGAGTCTGATTCAGAAACTTGAAGCAGG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGAGCAGTTACAGACAATaGAATCATTGGCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKSSYRQ*NHWPAQ
Trigger: TTGAGCAGGCCAATGATTTCATTGTCTGTAACTGCT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAAATTTCCAGGTAACCTaGTCAACAGGGTCTTTAACT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTNFQVT*STGSLT
Trigger: AGTTAAAGACCCTGTTGATCAGGTTACCTGGAAATT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCTGCAGACTTTTTGCTaGATAACTGAGCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSALQTFC*ITELLR
Trigger: TCTCAGCAGCTCAGTTATTCAGCAAAAAGTCTGCAG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGGAGGGAATGAGGGATaGTTATCAATGTGGAATGGC +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLGGNEG*LSMWNG
Trigger: GCCATTCCACATTGATAAGCATCCCTCATTCCCTCC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCAACTTCAGGGAAACATaGCCGAGTCACAGTGACTAC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFNFRET*PSHSDY
Trigger: GTAGTCACTGTGACTCGGGCATGTTTCCCTGAAGTT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGTGGGGCATCAAGATTaGAAGACACCAACAATACCA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAVGHQD*KTPTIP
Trigger: TGGTATTGTTGGTGTCTTGCAATCTTGATGCCCCAC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCAAATTTCTTTGCCCTaGTTCAAGTTTCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFQISLP*FKFLNQ
Trigger: CTGATTCAGAAACTTGAAGCAGGGCAAAGAAATTTG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCAAAGGCTTTTTCCATaGACTCGGATAGCACTCCCA +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFQRLFP*TRIALP
Trigger: TGGGAGTGCTATCCGAGTGCATGGAAAAAGCCTTTG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTACTTCTCCTGAAGCTTaGCCTAGTGACCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTTSPEA*PSDLCA
Trigger: TGCACACAGGTCACTAGGGCAAGCTTCAGGAGAAGT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTGGGACTCTCTGAAGTaGAGCTCCGCTAAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFWDSLK*SSAKFV
Trigger: CACAAACTTAGCGGAGCTGCACTTCAGAGAGTCCCA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTATGTACAAGCGAACTaGATTGGAAAGGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKYVQAN*IGKEKR
Trigger: CCTCTTCTCCTTTCCAATGCAGTTCGCTTGTACATA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTATGTACAAGCGAACTaGATTGGAAAGGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPYVQAN*IGKEKR
Trigger: CCTCTTCTCCTTTCCAATGCAGTTCGCTTGTACATA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCCATCTATAGGCGGTTaGCTTCTGAGTGAACCAATG +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFPSIGG*LLSEPM
Trigger: CATTGGTTCACTCAGAAGGCAACCGCCTATAGATGG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCAGTTTAAACCCTGGATaGTGGATGGTAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFSLNPG*WMVVSC
Trigger: GCAGCTCACTACCATCCACCATCCAGGGTTTAAACT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGAAAGGTGCAATCCAATaGAGTCACAGCCTTATCCTT +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKKGAIQ*SHSLIL
Trigger: AAGGATAAGGCTGTGACTCCATTGGATTGCACCTTT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGAGTTTGACCAAGTCTaGGAGCTGGAAGTATTCAGC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFEFDQV*ELEVFS
Trigger: GCTGAATACTTCCAGCTCCCAGACTTGGTCAAACTC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGTGGCAGAATTCATCTaGGCTTTGCTTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSVAEFI*ALLDFI
Trigger: GATGAAATCAAGCAAAGCCCAGATGAATTCTGCCAC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCTTGTGTCGCTTCCTTaGGAGGCATCTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFLVSLP*EASSKS
Trigger: TGACTTTGAAGATGCCTCCCAAGGAAGCGACACAAG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATTGAATATTTTACCATaGGATGAGTGCCAGTCGAGA +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTLNILP*DECQSR
Trigger: TCTCGACTGGCACTCATCCCATGGTAAAATATTCAA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGTGTTGCAGGCTACCTaGACCTCACTTGATAACTCC +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTVLQAT*TSLDNS
Trigger: GGAGTTATCAAGTGAGGTCCAGGTAGCCTGCAACAC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACCAGCAGGTTTCATTTaGTCTAATTTCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTPAGFI*SNFSAD
Trigger: ATCTGCAGAGAAATTAGACCAAATGAAACCTGCTGG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTTGCCAAAAGATCTCTaGTATGCAAAACCACTCCTG +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKLPKDL*YAKPLL
Trigger: CAGGAGTGGTTTTGCATACCAGAGATCTTTTGGCAA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGGAAGGATGTCAGGCTaGGATCTCACCTTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTGRMSG*DLTLFS
Trigger: GCTAAACAAGGTGAGATCCCAGCCTGACATCCTTCC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAATTAACAGATTACAGTaGGACTCTCTGAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSINRLQ*DSLKCS
Trigger: GCTGCACTTCAGAGAGTCCCACTGTAATCTGTTAAT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGATAAGAGTCCACAGGTaGAGTGATGCTGAAAAAGTA +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKIRVHR*SDAEKV
Trigger: TACTTTTTCAGCATCACTTCACCTGTGGACTCTTAT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGATATTCAGTGTAGCTTaGCCAGATCTTGTCATCTGT +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKIFSVA*PDLVIC
Trigger: ACAGATGACAAGATCTGGTCAAGCTACACTGAATAT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGGCCCTCCCTTATAGATaGTACTTCCTTAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKALPYR*YFLKSS
Trigger: TGAACTTTTAAGGAAGTATCATCTATAAGGGAGGGC...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTAGAAGCTCATCCATCTaGAATATTCTAAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSARSSSI*NILREG
Trigger: GCCCTCTCTTAGAATATTTCAGATGGATGAGCTTCT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCATCTGTCATCCTAGTGTaGAGGCGAGAATTACAAAAA +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSSVILV*RRELQK
Trigger: TTTTTGTAATTCTCGCCTTCACACTAGGATGACAGA...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGGGGCTCTACACATGTaGTTCCCCATTCATTGTATC +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTGALHM*FPIHCI
Trigger: GATACAATGAATGGGGAATCACATGTGTAGAGCCCC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATACAAGTGCTACACATaGTTTTTGTGCATACTGAGT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTYKCYT*FLCILS
Trigger: ACTCAGTATGCACAAAAATCATGTGTAGCACTTGTA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTTGACAGACAGCAGATaGAATGGCAAAGAATTCATG +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKLTDSR*NGKEFM
Trigger: CATGAATTCTTTGCCATTTCATCTGCTGTCTGTCAA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGGGATCTTCAATTATCTaGGAGCTTCATAGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKGSSII*ELHSPD
Trigger: ATCAGGACTATGAAGCTCTCAGATAATTGAAGATCC...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGGATCTTCAATTATCTaGGAGCTTCATAGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSGSSII*ELHSPD
Trigger: ATCAGGACTATGAAGCTCTCAGATAATTGAAGATCC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTGTTTGAATTTCACATaGGGAGACAAGCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKCLNFT*GDKLKL
Trigger: AAGCTTGAGCTTGTCTCCTCATGTGAAATTCAAACA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCAAGCTAAGCACTATTaGCATTGTGGGCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFQAKHY*HCGLDN
Trigger: GTTATCCAGCCCACAATGTCAATAGTGCTTAGCTTG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATTTTATCCTATTTATTaGCCTGGAAGACTTCCCGTA +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTFYPIY*PGRLPV
Trigger: TACGGGAAGTCTTCCAGGTCAATAAATAGGATAAAA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCTGAGGCAGAAAGACTaGAGTAGAAGAACACAAGAC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFLRQKD*SRRTQD
Trigger: GTCTTGTGTTCTTCTACTTCAGTCTTTCTGCCTCAG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAAGTCATCAAGTGCTTaGATGACGTCAGGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPKSSSA*MTSGKS
Trigger: ACTTTTTCCTGACGTCATTCAAGCACTTGATGACTT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCAATGTGCAACAAACTaGCCCAAGTCATCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFQCATN*PKSSSA
Trigger: AGCACTTGATGACTTGGGTCAGTTTGTTGCACATTG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTACGGTTGCCTTCTGAGTaGACCAATGATTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLRLPSE*TNDCQN
Trigger: ATTTTGGCAATCATTGGTTCACTCAGAAGGCAACCG...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCTGTTGTTTCAGCAGTaGAGGCAAGAAACCATCCAG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTLLFQQ*RQETIQ
Trigger: CTGGATGGTTTCTTGCCTGCACTGCTGAAACAACAG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTCCTTAGAAGAGAGTTaGAAGAGGTACCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSASLEES*KRYQDL
Trigger: TAAGTCCTGGTACCTCTTGCAACTCTCTTCTAAGGA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAGTGCCAGAGAGGTGTaGTCTTGGAAAATAACTATT +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPSAREV*SWKITI
Trigger: AATAGTTATTTTCCAAGAGCACACCTCTCTGGCACT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCAAAATTCCAAACTTATaGCATTGGGCCAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFKIPNL*HWARSF
Trigger: AAAAGATCTGGCCCAATGGCATAAGTTTGGAATTTT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATGGTTACCACTGAAATaGATGAGGAATGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTWLPLK*MRNAEN
Trigger: ATTTTCAGCATTCCTCATGCATTTCAGTGGTAACCA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCGGAACTCTTGGCCTCTaGATATTCCCTAAACAGCAG +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFGTLGL*IFPKQQ
Trigger: CTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCC...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTTCTCACTCAGAGATATaGTCCCATCTACCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTSHSEI*SHLPRA
Trigger: AGCTCTGGGTAGATGGGAGCATATCTCTGAGTGAGA...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCATTGCCAAAATGATGTaGAATTCCATTGGGACAATT +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFIAKMM*NSIGTI
Trigger: AATTGTCCCAATGGAATTGCACATCATTTTGGCAAT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCGTCTTAGTGAGTGCTaGAGACCCAGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFRLSEC*RPSSCE
Trigger: TTCACAAGAACTGGGTCTCCAGCACTCACTAAGACG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTACCAAGTCTGGGAGCTaGAAGTATTCAGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTTKSGS*KYSASL
Trigger: AAGGGAAGCTGAATACTTCCAGCTCCCAGACTTGGT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTTGTCATCTGTATATTaGTTGATGAAAGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLSSVY*LMKDAV
Trigger: GACAGCATCTTTCATCAACCAATATACAGATGACAA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTCACACCATTAAACTGTaGGCAGTAAGAACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPHTIKL*AVRTLK
Trigger: TTTCAGAGTTCTTACTGCCCACAGTTTAATGGTGTG...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTTGAATATTTTACCATaGGATGAGTGCCAGTCGAGA +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKLNILP*DECQSR
Trigger: TCTCGACTGGCACTCATCCCATGGTAAAATATTCAA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAACACACCTGTGCCTATaGATAAAGATTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSTHLCL*IKIPLN
Trigger: ATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTACACACCTGTGCCTATaGATAAAGATTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPTHLCL*IKIPLN
Trigger: ATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTCCCATTGTGGGAGCTaGTGTCAAGTAATTTTACAA +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPSHCGS*CQVILQ
Trigger: TTGTAAAATTACTTGACACCAGCTCCCACAATGGGA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTCCCATTGTGGGAGCTaGTGTCAAGTAATTTTACAA +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKSHCGS*CQVILQ
Trigger: TTGTAAAATTACTTGACACCAGCTCCCACAATGGGA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTTGCCAAAAGATCTCTaGTATGCAAAACCACTCCTG +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSALPKDL*YAKPLL
Trigger: CAGGAGTGGTTTTGCATACCAGAGATCTTTTGGCAA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCATTGACATTGTGGGCTaGATAACTTTTTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: NMSKAPISHHSALVPAKFIDIVG*ITFCYG
Trigger: TCCATAACAAAAAGTTATCCAGCCCACAATGTCAAT...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGACTTGTCACATGTTTaGAAACAAGGACTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFDLSHV*KQGLGS
Trigger: GCTCCCAAGTCCTTGTTTCCAAACATGTGACAAGTC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAATCCACAGCCAAACTaGGTCTGGATCTTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLNPQPN*VWILSN
Trigger: ATTTGACAAGATCCAGACTCAGTTTGGCTGTGGATT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCAGCTCCTCCTCAATTaGGAGCTTTTCTTTAACAGC +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTQLLLN*ELFFNS
Trigger: GCTGTTAAAGAAAAGCTCTCAATTGAGGAGGAGCTG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCCAAATTCAACTTCTTaGCCCATTAAGCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAPNSTS*PIKLCD
Trigger: ATCACAGAGCTTAATGGGTCAAGAAGTTGAATTTGG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACATTACAGTCAGGTCTaGAATTTAAGGAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSHYSQV*NLRKLE
Trigger: TTCCAACTTCCTTAAATTTCAGACCTGACTGTAATG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTTCCCCTTTTCCTGCTaGATGCAGATCAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFFPFSC*MQISSF
Trigger: AAATGAACTGATCTGCATTCAGCAGGAAAAGGGGAA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGAAAGTAAGAGAAAATaGGGAAGTGCTTCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAESKRK*GSASKE
Trigger: CTCCTTAGAAGCACTTCCTCATTTTCTCTTACTTTC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAGAAAGGGTTATGGTTaGCAGACAGCAGATGAAATG +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLRKGYG*QTADEM
Trigger: CATTTCATCTGCTGTCTGTCAACCATAACCCTTTCT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGGGTCAATTGGATCATTaGAACCCTTTTGAATTCACT +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKGQLDH*NPFEFT
Trigger: AGTGAATTCAAAAGGGTTTCAATGATCCAATTGACC...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTCAAGGAGAGTTTCCTaGAATTGTTTCTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSASRRVS*NCFSLS
Trigger: AGACAGAGAGAAACAATTTCAGGAAACTCTCCTTGA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAGCAGTTACAGACAATaGAATCATTGGCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLSSYRQ*NHWPAQ
Trigger: TTGAGCAGGCCAATGATTTCATTGTCTGTAACTGCT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGCTACTTTATCTTTCTaGGCCTCACTGACCTCATCT +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTATLSF*ASLTSS
Trigger: AGATGAGGTCAGTGAGGCTCAGAAAGATAAAGTAGC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTCACATTTGGGCTTTTaGCCTGTCTTGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKSHLGF*PVLNKN
Trigger: GTTTTTATTCAAGACAGGTCAAAAGCCCAAATGTGA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCAAAGCATGTGGCTATaGATGAGTACACAACTTACT +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAQSMWL*MSTQLT
Trigger: AGTAAGTTGTGTACTCATTCATAGCCACATGCTTTG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAACATGAAGTTAGGATaGTGTAAAACGTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLNMKLG*CKTSPL
Trigger: CAGAGGGGACGTTTTACATCATCCTAACTTCATGTT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAATCCTCTATTTGTGGTaGCATCACATTCACAGCATC +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLILYLW*HHIHSI
Trigger: GATGCTGTGAATGTGATGTCACCACAAATAGAGGAT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCGGTTGCCTTCTGAGTaGACCAATGATTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFRLPSE*TNDCQN
Trigger: ATTTTGGCAATCATTGGTTCACTCAGAAGGCAACCG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGGTATCAATGAAAAGTaGCAGAGAGGTGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTGINEK*QRGVLL
Trigger: CAAGAGCACACCTCTCTGGCACTTTTCATTGATACC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTAATTCATCTGGGCTTTaGTTGATTTCATCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTNSSGL*LISSGV
Trigger: GACCCCCGATGAAATCAAGCAAAGCCCAGATGAATT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCTCGATCAGGGTCTCTaGTTTCATTCAAAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFLDQGL*FHSKFL
Trigger: GAGAAACTTTGAATGAAAGCAGAGACCCTGATCGAG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTACTCGATCAGGGTCTCTaGTTTCATTCAAAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLLDQGL*FHSKFL
Trigger: GAGAAACTTTGAATGAAAGCAGAGACCCTGATCGAG...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCTTCTTTGTCACCTTTaGCATTCTTGCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFLLCHL*HSCSSN
Trigger: ATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTTGGTTACCACTGAAATaGATGAGGAATGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPWLPLK*MRNAEN
Trigger: ATTTTCAGCATTCCTCATGCATTTCAGTGGTAACCA...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTAGTAGCAAGGACTTGTaGTTAGACTTGTCACATGTT +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSASSKDL*LDLSHV
Trigger: AACATGTGACAAGTCTAAGCACAAGTCCTTGCTACT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAGGAAAATCTGGCTCTaGCACTTTTTAGCTATGAGC +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLRKIWL*HFLAMS
Trigger: GCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCATTCCCCAGTAATATaGAAAGCATGTGGCTATGAA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAHSPVI*KACGYE
Trigger: TTCATAGCCACATGCTTTGCATATTACTGGGGAATG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTGTTATTCATCAATGTaGAACAAACTGACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKCYSSM*NKLTQV
Trigger: GACTTGGGTCAGTTTGTTGCACATTGATGAATAACA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTAGCCGTGTCTCTCTTTaGGGAAAACATTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTSRVSL*GKHFPQ
Trigger: CTGTGGAAAATGTTTTCCCCAAAGAGAGACACGGCT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAATTTTTAGGAAATCCTaGATACATTTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSIFRKS*IHFSSS
Trigger: GGAGCTGGAGAAATGTATCCAGGATTTCCTAAAAAT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGATTTTTAGGAAATCCTaGATACATTTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKIFRKS*IHFSSS
Trigger: GGAGCTGGAGAAATGTATCCAGGATTTCCTAAAAAT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGATAAGAATCAAAATTTaGTTCCCATTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKIRIKI*FPLWEL
Trigger: CAGCTCCCACAATGGGAACCAAATTTTGATTCTTAT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAACCAGCATGCAAATTaGCAAAAACATTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: SLINSEENLALPLFSYEPNQHAN*QKHLSA
Trigger: GGCAGATAAATGTTTTTGCCAATTTGCATGCTGGTT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAAATAAATTGAAACTGTaGGGCATCAAGATTGCAAGA +
Preference number: 4 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTNKLKL*GIKIAR
Trigger: TCTTGCAATCTTGATGCCCCACAGTTTCAATTTATT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCATTTTCTCCAGACGTaGAAGCTAGCTTATCACGGT +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTHFLQT*KLAYHG
Trigger: ACCGTGATAAGCTAGCTTCCACGTCTGGAGAAAATG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTATCAGTTGAAGGCATaGGCTTGTGTGCATACAAAC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFYQLKA*ACVHTN
Trigger: GTTTGTATGCACACAAGCCCATGCCTTCAACTGATA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCGGACGAATTATTTTGTaGGTTAGGTTCGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFGRIIL*VRFDPV
Trigger: CACTGGGTCGAACCTAACCCACAAAATAATTCGTCC...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 72 bp TTACAGTCAGGTCTGAAATTTAAGGAAGTTGGAACTTaGGCCATTTTAGTTAGACCCCCAAAGTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: LQSGLKFKEVGT*AILVRPPKSLT
Trigger: TGTCAAAGACTTTGGGGGTCTAACTAAAATGGCCAAAGTTCCAACTTCCTTAAATTTCAGACCTGACTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 72 bp TTGGAAAGGAGAAGAGGTAATTTCATTGGGTGTCACTaGTTATTCATCAATGTGCAACAAACTGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: LERRRGNFIGCH*LFINVQQTDPS
Trigger: ACTTGGGTCAGTTTGTTGCACATTGATGAATAACAAGTGACACCCAATGAAATTACCTCTTCTCCTTTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTACTGCTGCTGCTATTTTaGTTTAAAGGTGCAATCCAA +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLLLLLF*FKGAIQ
Trigger: TTGGATTGCACCTTTAAATCAAAATAGCAGCAGCAG...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTCTGTCATCCTAGTGTaGAGGCGAGAATTACAAAAA +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFSVILV*RRELQK
Trigger: TTTTTGTAATTCTCGCCTTCACACTAGGATGACAGA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTACAAGTGCTACACATaGTTTTTGTGCATACTGAGT +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAYKCYT*FLCILS
Trigger: ACTCAGTATGCACAAAAATCATGTGTAGCACTTGTA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATTGACAGACAGCAGATaGAATGGCAAAGAATTCATG +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLLTDSR*NGKEFM
Trigger: CATGAATTCTTTGCCATTTCATCTGCTGTCTGTCAA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCAGAAAGGGTTATGGTTaGCAGACAGCAGATGAAATG +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFRKGYG*QTADEM
Trigger: CATTTCATCTGCTGTCTGTCAACCATAACCCTTTCT...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTTTGTGGTCTACTGTTaGTCAGCTTGGGAAACATCT +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFFVVYC*SAWETS
Trigger: AGATGTTTCCCAAGCTGATCAACAGTAGACCACAAA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGTAACAATGAGATGCTaGGGGCAGTTAATCACATTT +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFVTMRC*GQLITF
Trigger: AAATGTGATTAACTGCCCTCAGCATCTCATTGTTAC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGCATGTGGCTATGAATaGGTACACAACTTACTGTAT +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFACGYE*VHNLLY
Trigger: ATACAGTAAGTTGTGTACTCATTCATAGCCACATGC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTAACATGAAGTTAGGATaGTGTAAAACGTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTNMKLG*CKTSPL
Trigger: CAGAGGGGACGTTTTACATCATCCTAACTTCATGTT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCATTAATGAGAGATTTTaGCATCCGCCACCCATGATT +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFINERF*HPPPMI
Trigger: AATCATGGGTGGCGGATGTCAAAATCTCTCATTAAT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCATCAAGTGCTTGAATaGCGTCAGGAAAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFHQVLE*RQEKVT
Trigger: TGTTACTTTTTCCTGACGTCATTCAAGCACTTGATG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCAATATCTCCAGGCATTaGCAAAAGATCTCTGGTATG +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFNISRH*QKISGM
Trigger: CATACCAGAGATCTTTTGGCAATGCCTGGAGATATT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTACCCAAGTCATCAAGTaGTTGAATGACGTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTTQVIK*LNDVRK
Trigger: TTTCCTGACGTCATTCAAGCACTTGATGACTTGGGT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGATTGCCAAAATGATGTaGAATTCCATTGGGACAATT +
Preference number: 4 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKIAKMM*NSIGTI
Trigger: AATTGTCCCAATGGAATTGCACATCATTTTGGCAAT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCACACCATTAAACTGTaGGCAGTAAGAACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFHTIKL*AVRTLK
Trigger: TTTCAGAGTTCTTACTGCCCACAGTTTAATGGTGTG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATCCTATTTATTGACCTaGAAGACTTCCCGTATATGG +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLSYLLT*KTSRIW
Trigger: CCATATACGGGAAGTCTTCCAGGTCAATAAATAGGA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTTCTGAGAGCACTTTGTaGTCTACTGTTGATCAGCTT +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTSESTL*STVDQL
Trigger: AAGCTGATCAACAGTAGACCACAAAGTGCTCTCAGA...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGATTGTACAAAGAGATaGTTAAGCCAGCAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFDCTKR*LSQQPL
Trigger: TAAAGGCTGCTGGCTTAACCATCTCTTTGTACAATC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCATTAACAGATTACAGTaGGACTCTCTGAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFINRLQ*DSLKCS
Trigger: GCTGCACTTCAGAGAGTCCCACTGTAATCTGTTAAT...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGAGCTTGATAATCCCTaGTCAGATGCACTTGAAATT +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLELDNP*SDALEI
Trigger: AATTTCAAGTGCATCTGACCAGGGATTATCAAGCTC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCATATTCAGTGTAGCTTaGCCAGATCTTGTCATCTGT +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFIFSVA*PDLVIC
Trigger: ACAGATGACAAGATCTGGTCAAGCTACACTGAATAT...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTGTAGCACAAGTCTATaGAAGAGCTATTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFCSTSL*KSYWYL
Trigger: AAGGTACCAATAGCTCTTTCATAGACTTGTGCTACA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCCTGCTTCAAGTTTCTaGATCAGACTCTTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFPASSF*IRLFEV
Trigger: AACTTCAAAGAGTCTGATTCAGAAACTTGAAGCAGG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTACGCACATTATCCACTaGGCTGACATAAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTTHIIH*ADINLK
Trigger: TTTTAGGTTTATGTCAGCTCAGTGGATAATGTGCGT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTTGTTTGAATTTCACATaGGGAGACAAGCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTCLNFT*GDKLKL
Trigger: AAGCTTGAGCTTGTCTCCTCATGTGAAATTCAAACA...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTCAAGGAGAGTTTCCTaGAATTGTTTCTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFSRRVS*NCFSLS
Trigger: AGACAGAGAGAAACAATTTCAGGAAACTCTCCTTGA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTCACATTTGGGCTTTTaGCCTGTCTTGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFSHLGF*PVLNKN
Trigger: GTTTTTATTCAAGACAGGTCAAAAGCCCAAATGTGA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCAAAGCATGTGGCTATaGATGAGTACACAACTTACT +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFQSMWL*MSTQLT
Trigger: AGTAAGTTGTGTACTCATTCATAGCCACATGCTTTG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGCAAAAACATTTATCTaGCACAGAGTCACCATAAGG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTAKTFI*HRVTIR
Trigger: CCTTATGGTGACTCTGTGGCAGATAAATGTTTTTGC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCATTCCCCAGTAATATaGAAAGCATGTGGCTATGAA +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTHSPVI*KACGYE
Trigger: TTCATAGCCACATGCTTTGCATATTACTGGGGAATG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCACGGTAGGAGAAAACTaGCCATGTTCAAACCATAAT +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFTVGEN*PCSNHN
Trigger: ATTATGGTTTGAACATGGGCAGTTTTCTCCTACCGT...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCAGCAAAGCAGTAAAATaGAGCCTGAGGGTATTAATT +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFSKAVK*SLRVLI
Trigger: AATTAATACCCTCAGGCTCCATTTTACTGCTTTGCT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTTGCAATGGAGATCACTaGAAAAAGAATCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTCNGDH*KKNLHS
Trigger: GGAATGGAGATTCTTTTTCCAGTGATCTCCATTGCA...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTATGAATAGGGTCAATTaGATCATTGAAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAMNRVN*IIETLL
Trigger: CAAAAGGGTTTCAATGATCCAATTGACCCTATTCAT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTATAACGTGGGAATTTaGTATGTATCCAGTTACTCT +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAYNVGI*YVSSYS
Trigger: AGAGTAACTGGATACATACCAAATTCCCACGTTATA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCCATCCCTGGGATATTaGTATGATACATTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAPSLGY*YDTLKE
Trigger: TTCTTTTAATGTATCATACCAATATCCCAGGGATGG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCGATTGTACAAAGAGATaGTTAAGCCAGCAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFDCTKR*LSQQPL
Trigger: TAAAGGCTGCTGGCTTAACCATCTCTTTGTACAATC...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGAGCTTGATAATCCCTaGTCAGATGCACTTGAAATT +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTELDNP*SDALEI
Trigger: AATTTCAAGTGCATCTGACCAGGGATTATCAAGCTC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCTCAGATGTCCGTATTaGTTTTTACCATTATTGTCA +
Preference number: 4 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSALRCPY*FLPLLS
Trigger: TGACAATAATGGTAAAAACCAATACGGACATCTGAG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR TCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTTTTATCCTATTTATTaGCCTGGAAGACTTCCCGTA +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFFYPIY*PGRLPV
Trigger: TACGGGAAGTCTTCCAGGTCAATAAATAGGATAAAA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR TCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTATGCACGTATTTCGGTaGAGTTTCTTTTCTAAAGCT +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTMHVFR*SFFSKA
Trigger: AGCTTTAGAAAAGAAACTTCACCGAAATACGTGCAT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGATGGTATTGCCATGTaGTATCAAGAAACATTGAAA +
Preference number: 4 (lower is better)
Translates to: EMAHAKPINQHANWQKHLDGIAM*YQETLK
Trigger: TTTCAATGTTTCTTGATAGCACATGGCAATACCATC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCAAATTTCTTTGCCCTaGTTCAAGTTTCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTQISLP*FKFLNQ
Trigger: CTGATTCAGAAACTTGAAGCAGGGCAAAGAAATTTG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR GCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTGTTATTCATCAATGTaGAACAAACTGACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFCYSSM*NKLTQV
Trigger: GACTTGGGTCAGTTTGTTGCACATTGATGAATAACA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTTGTCATCTGTATATTaGTTGATGAAAGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFLSSVY*LMKDAV
Trigger: GACAGCATCTTTCATCAACCAATATACAGATGACAA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTTAATGTGGATTATGTaGAAAGGCCACACCATTAAA +
Preference number: 4 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFLMWIM*KGHTIK
Trigger: TTTAATGGTGTGGCCTTTCCACATAATCCACATTAA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 72 bp GCGTCATGTGTATATACATACTTAGTTGTGCTTGTGTaGCACAAATACTCATGCATACGGAGTCAATATAAA +
Preference number: 4 (lower is better)
Translates to: ASCVYTYLVVLV*HKYSCIRSQYK
Trigger: TTTATATTGACTCCGTATGCATGAGTATTTGTGCAACACAAGCACAACTAAGTATGTATATACACATGACGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
3UTR CAA 72 bp CTAAGTTGGGGCTCTACACATGTGATTCCCCATTCATaGTATCCACTCAATACTACTAACTTCTTTATATTA +
Preference number: 4 (lower is better)
Translates to: LSWGSTHVIPHS*YPLNTTNFFIL
Trigger: TAATATAAAGAAGTTAGTAGTATTGAGTGGATACAATGAATGGGGAATCACATGTGTAGAGCCCCAACTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTATGAATAGGGTCAATTaGATCATTGAAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: TKITKFLQPTQRFLILQTMNRVN*IIETLL
Trigger: CAAAAGGGTTTCAATGATCCAATTGACCCTATTCAT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTATAACGTGGGAATTTaGTATGTATCCAGTTACTCT +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFYNVGI*YVSSYS
Trigger: AGAGTAACTGGATACATACCAAATTCCCACGTTATA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CCA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCCATCCCTGGGATATTaGTATGATACATTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: EKESPFQRIQQDENNRHFPSLGY*YDTLKE
Trigger: TTCTTTTAATGTATCATACCAATATCCCAGGGATGG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 90 bp GATGGAGAGATGTGCCCTGCTAGGGTCCCAGGTAGCCACCCCACCTaGCGGCAAGGGCAAACGGACTCCCATGTTCCCAGCCAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: DGEMCPARVPGSHPT*RQGQTDSHVPSQVG
Trigger: TCCCACCTGGCTGGGAACATGGGAGTCCGTTTGCCCTTGCCGGCAGGTGGGGTGGCTACCTGGGACCCTAGCAGGGCACATCTCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS TCA 90 bp GGTCCAGAGTCTGGATGTTGGTCTGGCGTGTCACGGGACCACAGATaGCCGTCTCCTGGGGAGAGCTGGCCTCAGACTGGCTGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: GPESGCWSGVSRDHR*PSPGESWPQTGCRS
Trigger: GCTGCGACAGCCAGTCTGAGGCCAGCTCTCCCCAGGAGACGGTCATCTGTGGTCCCGTGACACGCCAGACCAACATCCAGACTCTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 90 bp TGGATGTTGGTCTGGCGTGTCACGGGACCACAGATGACCGTCTCCTaGGGAGAGCTGGCCTCAGACTGGCTGTCGCAGCTAGATGTGGAG +
Preference number: 5 (lower is better)
Translates to: WMLVWRVTGPQMTVS*GELASDWLSQLDVE
Trigger: CTCCACATCTAGCTGCGACAGCCAGTCTGAGGCCAGCTCTCCCCAGGAGACGGTCATCTGTGGTCCCGTGACACGCCAGACCAACATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 90 bp ACAGGGCCCTTCTTGATGGGACGGTCCAGAGTCTGGATGTTGGTCTaGCGTGTCACGGGACCACAGATGACCGTCTCCTGGGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: TGPFLMGRSRVWMLV*RVTGPQMTVSWGEL
Trigger: CAGCTCTCCCCAGGAGACGGTCATCTGTGGTCCCGTGACACGCCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS TCA 90 bp TCCGCCGCATCTCTGACTGTTGGATCAGCTGGACAGGGCCCTTCTTaGTGGGACGGTCCAGAGTCTGGATGTTGGTCTGGCGTGTCACGG +
Preference number: 5 (lower is better)
Translates to: SAASLTVGSAGQGPS*WDGPESGCWSGVSR
Trigger: CCGTGACACGCCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTCAGAGATGCGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 90 bp TGGATCAGCTGGACAGGGCCCTTCTTGATGGGACGGTCCAGAGTCTaGATGTTGGTCTGGCGTGTCACGGGACCACAGATGACCGTCTCC +
Preference number: 5 (lower is better)
Translates to: WISWTGPFLMGRSRV*MLVWRVTGPQMTVS
Trigger: GGAGACGGTCATCTGTGGTCCCGTGACACGCCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCAGCTGATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 90 bp GTCAGAGTCCGGAGTAAGTCGCTTTTCCGCCGCATCTCTGACTGTTaGATCAGCTGGACAGGGCCCTTCTTGATGGGACGGTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: VRVRSKSLFRRISDC*ISWTGPFLMGRSRV
Trigger: GACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTCAGAGATGCGGCGGAAAAGCGACTTACTCCGGACTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 90 bp TGGCGGCGGAGCTGGGTGGTTCCACAGTTCCCAGTGCAGTTCGGATaGTGTTGTTTCAGCAGTGCAGGCAAGAAACCATCCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: WRRSWVVPQFPVQFG*CCFSSAGKKPSREM
Trigger: CATTTCCCTGGATGGTTTCTTGCCTGCACTGCTGAAACAACAGCATCCGAACTGCACTGGGAACTGTGGAACCACCCAGCTCCGCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS GCA 90 bp TTAGAAGCTTTTCAGAAAGCCCAGAAGCAGAAAGATGGAGAGATGTaGCCTGCTAGGGTCCCAGGTAGCCACCCCACCTGCCGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: LEAFQKAQKQKDGEM*PARVPGSHPTCRQG
Trigger: CCCTTGCCGGCAGGTGGGGTGGCTACCTGGGACCCTAGCAGGGCACATCTCTCCATCTTTCTGCTTCTGGGCTTTCTGAAAAGCTTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS CCA 90 bp CGGAGTAAGTCGCTTTTCCGCCGCATCTCTGACTGTTGGATCAGCTaGACAGGGCCCTTCTTGATGGGACGGTCCAGAGTCTGGATGTTG +
Preference number: 5 (lower is better)
Translates to: RSKSLFRRISDCWIS*TGPFLMGRSRVWML
Trigger: CAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTCAGAGATGCGGCGGAAAAGCGACTTACTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGCAGGAGCACAGCCCTaGGGAGGTCTAGGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGAGAQP*GGLGPG
Trigger: GCCAGGGCCTAGACCTCCCAAGGGCTGTGCTCCTGC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 90 bp CCTTCCACAAACCAAAATCCGGGGAACTCTCCGAAACTTGGCATCTaGCTGTCCCTCTCTGCCCAAGGTGCAGGATCCTCTGTAACCCAC +
Preference number: 5 (lower is better)
Translates to: PSTNQNPGNSPKLGI*LSLSAQGAGSSVTH
Trigger: GTGGGTTACAGAGGATCCTGCACCTTGGGCAGAGAGGGACAGGCAGATGCCAAGTTTCGGAGAGTTCCCCGGATTTTGGTTTGTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 90 bp TGCAAGACGTGCCGCTCTCCCCTTCTTTGTCACCTTTGCCATTCTTaGAGCAGCAATCGCAGTGTGAGGGTGACCATCTGGAAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: CKTCRSPLLCHLCHS*SSNRSVRVTIWKAH
Trigger: GTGAGCCTTCCAGATGGTCACCCTCACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGGCACGTCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 90 bp AGAGGTCATTGCAAGACGTGCCGCTCTCCCCTTCTTTGTCACCTTTaGCATTCTTGCAGCAGCAATCGCAGTGTGAGGGTGACCATCTGG +
Preference number: 5 (lower is better)
Translates to: RGHCKTCRSPLLCHL*HSCSSNRSVRVTIW
Trigger: CCAGATGGTCACCCTCACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGGCACGTCTTGCAATGACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATCCAGAGTCTGGATGTaGGTCTGGCGTGTCACGGGA +
Preference number: 5 (lower is better)
Translates to: MTQLNPSMGTAKARIPKASRVWM*VWRVTG
Trigger: TCCCGTGACACGCCAGACCAACATCCAGACTCTGGA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCACTCCAGGACAAGCCCTaGATAGTTGCTAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: MTQLNPSMGTAKARIPKALQDKP*IVARPG
Trigger: GCCTGGCCTAGCAACTATCAAGGGCTTGTCCTGGAG...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 90 bp AGGAAATCCTTCCACAAACCAAAATCCGGGGAACTCTCCGAAACTTaGCATCTGCCTGTCCCTCTCTGCCCAAGGTGCAGGATCCTCTGT +
Preference number: 5 (lower is better)
Translates to: RKSFHKPKSGELSET*HLPVPLCPRCRILC
Trigger: ACAGAGGATCCTGCACCTTGGGCAGAGAGGGACAGGCAGATGCCAAGTTTCGGAGAGTTCCCCGGATTTTGGTTTGTGGAAGGATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGTAATGAAACCCCACTaGCGGTCGGCAGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGVMKPH*RSAGSR
Trigger: CCTGCTCCCTGCCGACCGCAAGTGGGGTTTCATTAC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 90 bp ACCCCCGACATTCAGCTCTACCACCTCAGGGAAGGAGTTGGGAACTaGGGACCCTTGTTCTCGAGGATAATAACGACTACAGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: TPDIQLYHLREGVGN*GPLFSRIITTTVST
Trigger: AGTGGAAACTGTAGTCGTTATTATCCTCGAGAACAAGGGTCCGCAGTTCCCAACTCCTTCCCTGAGGTGGTAGAGCTGAATGTCGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGATGTGGAGAGGTCATaGCAAGACGTGCCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGDVERS*QDVPLS
Trigger: GGAGAGCGGCACGTCTTGCAATGACCTCTCCACATC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGCAGGAGCACAGCCCTaGGGAGGTCTAGGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: SLINSEENLALPLFSYEPAGAQP*GGLGPG
Trigger: GCCAGGGCCTAGACCTCCCAAGGGCTGTGCTCCTGC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 90 bp TGGGAGGCATCTTCAAAGTCACTGTGGCAGAATTCATCTGGGCTTTaGTTGATTTCATCGGGGGTCAGGAGTTTGACCAAGTCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: WEASSKSLWQNSSGL*LISSGVRSLTKSGS
Trigger: GCTCCCAGACTTGGTCAAACTCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTCTGCCACAGTGACTTTGAAGATGCCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 90 bp AAACTTGACCCCCGACATTCAGCTCTACCACCTCAGGGAAGGAGTTaGGAACTGCGGACCCTTGTTCTCGAGGATAATAACGACTACAGT +
Preference number: 5 (lower is better)
Translates to: KLDPRHSALPPQGRS*ELRTLVLEDNNDYS
Trigger: ACTGTAGTCGTTATTATCCTCGAGAACAAGGGTCCGCAGTTCCCAACTCCTTCCCTGAGGTGGTAGAGCTGAATGTCGGGGGTCAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATCACCTTTGCCATTCTaGCAGCAGCAATCGCAGTGT +
Preference number: 5 (lower is better)
Translates to: MTQLNPSMGTAKARIPKASPLPF*QQQSQC
Trigger: ACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTGA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 90 bp GCTTCCTTGGGAGGCATCTTCAAAGTCACTGTGGCAGAATTCATCTaGGCTTTGCTTGATTTCATCGGGGGTCAGGAGTTTGACCAAGTC +
Preference number: 5 (lower is better)
Translates to: ASLGGIFKVTVAEFI*ALLDFIGGQEFDQV
Trigger: GACTTGGTCAAACTCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTCTGCCACAGTGACTTTGAAGATGCCTCCCAAGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCTTCCCTTGGAGTCCTaGGCTAGATCATTAGCCGTG +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGLPLES*ARSLAV
Trigger: CACGGCTAATGATCTAGCCAAGGACTCCAAGGGAAG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAGAATTCATCTGGGCTTaGCTTGATTTCATCGGGGGT +
Preference number: 5 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAEFIWA*LDFIGG
Trigger: ACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTC...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCCGCTCTCCCCTTCTTaGTCACCTTTGCCATTCTTG +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGPLSPS*SPLPFL
Trigger: CAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCTCCAGGACAAGCCCTaGATAGTTGCTAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLQDKP*IVARPG
Trigger: GCCTGGCCTAGCAACTATCAAGGGCTTGTCCTGGAG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTCGGGGGTCAGGAGTTaGACCAAGTCTGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKSGVRS*TKSGSW
Trigger: CCAGCTCCCAGACTTGGTCAAACTCCTGACCCCCGA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGTAATGAAACCCCACTaGCGGTCGGCAGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SLINSEENLALPLFSYEPVMKPH*RSAGSR
Trigger: CCTGCTCCCTGCCGACCGCAAGTGGGGTTTCATTAC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 90 bp TGGTTGATGAAAGATGCTGTCACCGATGAGTTACAGGCCACCATGTaGAATCCACACTCTGACAACATATCAAAAGCCCTTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: WLMKDAVTDELQATM*NPHSDNISKALSRC
Trigger: GCACCTGGAAAGGGCTTTTGATATGTTGTCAGAGTGTGGATTCCACATGGTGGCCTGTAACTCATCGGTGACAGCATCTTTCATCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGGAACTCTCCGAAACTaGGCATCTGCCTGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTGTLRN*ASACPS
Trigger: AGAGGGACAGGCAGATGCCAAGTTTCGGAGAGTTCC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCCTTCTTTGTCACCTTaGCCATTCTTGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGPSLSP*PFLQQQ
Trigger: TTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACTTCCCTTGGAGTCCTaGGCTAGATCATTAGCCGTG +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTLPLES*ARSLAV
Trigger: CACGGCTAATGATCTAGCCAAGGACTCCAAGGGAAG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATCATCTGGGCTTTGCTaGATTTCATCGGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTSSGLC*ISSGVR
Trigger: CCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATGGACAGGGCCCTTCTaGATGGGACGGTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLWTGPF*MGRSRV
Trigger: GACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATTCAAGTACTGTGTGTaGTCCTTAGTTCCACAACAA +
Preference number: 5 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAFKYCV*SLVPQQ
Trigger: TTGTTGTGGAACTAAGGACAACACACAGTACTTGAA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS TCA 90 bp TTCCTTTTTCTGGAAAGTGATCAGGCAGGACCACCTGCCTGTCCCTaGGATAGTCCAGAATATAACGGAACAAGAATCCATCTCTGTCAA +
Preference number: 5 (lower is better)
Translates to: FLFLESDQAGPPACP*DSPEYNGTRIHLCQ
Trigger: TTGACAGAGATGGATTCTTGTTCCGTTATATTCTGGACTATCTCAGGGACAGGCAGGTGGTCCTGCCTGATCACTTTCCAGAAAAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGCAGTTCGGATGCTGTaGTTTCAGCAGTGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: SLINSEENLALPLFSYEPAVRML*FQQCRQ
Trigger: TTGCCTGCACTGCTGAAACAACAGCATCCGAACTGC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCACCTCAGGGAAGGAGTaGGGAACTGCGGACCCTTGT +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFTSGKE*GTADPC
Trigger: ACAAGGGTCCGCAGTTCCCAACTCCTTCCCTGAGGT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTCGGGGGTCAGGAGTTaGACCAAGTCTGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFSGVRS*TKSGSW
Trigger: CCAGCTCCCAGACTTGGTCAAACTCCTGACCCCCGA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGTCATCTGGGCTTTGCTaGATTTCATCGGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKSSGLC*ISSGVR
Trigger: CCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGA...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCACTTGTCATCTGTATATaGGTTGATGAAAGATGCTGT +
Preference number: 5 (lower is better)
Translates to: MTQLNPSMGTAKARIPKALVICI*VDERCC
Trigger: ACAGCATCTTTCATCAACCAATATACAGATGACAAG...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCAAACCGATCTGGAATTTaGATTTTTAGGAAATCCTGG +
Preference number: 5 (lower is better)
Translates to: MTQLNPSMGTAKARIPKANRSGI*IFRKSW
Trigger: CCAGGATTTCCTAAAAATCAAAATTCCAGATCGGTT...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACAAAACCACTCCTGGTaGAGAGCCACGGCCTTAAAT +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTQNHSW*RATALN
Trigger: ATTTAAGGCCGTGGCTCTCAACCAGGAGTGGTTTTG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTTTGGACGAATTATTTaGTGGGTTAGGTTCGACCCA +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGFGRII*WVRFDP
Trigger: TGGGTCGAACCTAACCCACAAAATAATTCGTCCAAA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ATGACACAGCTAAATCCTAGCATGGGCACAGCCAAAGCCCGAATCCCAAAGGCATTCATTGGGTGTCACTaGTTATTCATCAATGTGCAA +
Preference number: 5 (lower is better)
Translates to: MTQLNPSMGTAKARIPKAFIGCH*LFINVQ
Trigger: TTGCACATTGATGAATAACAAGTGACACCCAATGAA...TGCCTTTGGGATTCGGGCTTTGGCTGTGCCCATGCTAGGATTTAGCTGTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTACCTCAGGGAAGGAGTaGGGAACTGCGGACCCTTGT +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTTSGKE*GTADPC
Trigger: ACAAGGGTCCGCAGTTCCCAACTCCTTCCCTGAGGT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGCGAGTAAAATAAACTaGACCCCCGACATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTASKIN*TPDIQL
Trigger: GAGCTGAATGTCGGGGGTCAAGTTTATTTTACTCGC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGGAACTCTCCGAAACTaGGCATCTGCCTGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFGTLRN*ASACPS
Trigger: AGAGGGACAGGCAGATGCCAAGTTTCGGAGAGTTCC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACCTTCTTTGTCACCTTaGCCATTCTTGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTPSLSP*PFLQQQ
Trigger: TTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTTCCAGAGTCTGGATGTaGGTCTGGCGTGTCACGGGA +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTSRVWM*VWRVTG
Trigger: TCCCGTGACACGCCAGACCAACATCCAGACTCTGGA...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAAACTCATTTCCAGTGTaGCAGGCTACCTGGACCTCA +
Preference number: 5 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSNSFPV*QATWTS
Trigger: TGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGTT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTGTGATTCCCCATTCATaGTATCCACTCAATACTACT +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGVIPHS*YPLNTT
Trigger: AGTAGTATTGAGTGGATACAATGAATGGGGAATCAC...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCAAAACCACTCCTGGTaGAGAGCCACGGCCTTAAAT +
Preference number: 5 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKQNHSW*RATALN
Trigger: ATTTAAGGCCGTGGCTCTCAACCAGGAGTGGTTTTG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTAAATATCTCCAGGCATaGCCAAAAGATCTCTGGTAT +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGKYLQA*PKDLWY
Trigger: ATACCAGAGATCTTTTGGCAATGCCTGGAGATATTT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS TCA 90 bp GATGCTGTTGTTTCAGCAGTGCAGGCAAGAAACCATCCAGGGAAATaGCTATTACATCATCTTAAAGGAATATGGCTTGGAGAAAGCGGA +
Preference number: 5 (lower is better)
Translates to: DAVVSAVQARNHPGK*LLHHLKGIWLGESG
Trigger: TCCGCTTTCTCCAAGCCATATTCCTTTAAGATGATGTAATAGTCATTTCCCTGGATGGTTTCTTGCCTGCACTGCTGAAACAACAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS TCA 90 bp CATATGAAAAACACTTTAGCACAGTGCTTGAATCACAGTAAATGCTaGCACCGAGGCATTGTAGGCATTGTAGTTTGTGGACAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: HMKNTLAQCLNHSKC*HRGIVGIVVCGQER
Trigger: CCTCTCCTGTCCACAAACTACAATGCCTACAATGCCTCGGTGTCAGCATTTACTGTGATTCAAGCACTGTGCTAAAGTGTTTTTCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGGCGAGTAAAATAAACTaGACCCCCGACATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKASKIN*TPDIQL
Trigger: GAGCTGAATGTCGGGGGTCAAGTTTATTTTACTCGC...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTCTTGTCATCTGTATATaGGTTGATGAAAGATGCTGT +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGLVICI*VDERCC
Trigger: ACAGCATCTTTCATCAACCAATATACAGATGACAAG...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTTTAGTTGTGCTTGTGTaGCACAAATACTCATGCATA +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGLVVLV*HKYSCI
Trigger: TATGCATGAGTATTTGTGCAACACAAGCACAACTAA...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAGGAGCTTCAGTTACCTaGTTGGGTTGTTACAGACAT +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTGASVT*LGCYRH
Trigger: ATGTCTGTAACAACCCAACAAGGTAACTGAAGCTCC...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAGACCCCCAAAGTCTTaGACAGTACTTCCAGTGACA +
Preference number: 5 (lower is better)
Translates to: SLINSEENLALPLFSYEPRPPKS*TVLPVT
Trigger: TGTCACTGGAAGTACTGTCAAAGACTTTGGGGGTCT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTCCACTCAAACTAGGTACTTTAAGCCTCCTCAGAGCCTTTTACTGGCCAGGTATTTTATCCTATTTATaGACCTGGAAGACTTCCCGT +
Preference number: 5 (lower is better)
Translates to: TPLKLGTLSLLRAFYWPGILSYL*TWKTSR
Trigger: ACGGGAAGTCTTCCAGGTCAATAAATAGGATAAAAT...ACCTGGCCAGTAAAAGGCTCTGAGGAGGCTTAAAGTACCTAGTTTGAGTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCCTACTGTTGATCAGCTaGGGAAACATCTTTAACAGG +
Preference number: 5 (lower is better)
Translates to: NMSKAPISHHSALVPAKFLLLIS*GNIFNR
Trigger: CCTGTTAAAGATGTTTCCCAAGCTGATCAACAGTAG...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACTTTGTGGTCTACTGTaGATCAGCTTGGGAAACATC +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTLCGLL*ISLGNI
Trigger: GATGTTTCCCAAGCTGATCAACAGTAGACCACAAAG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGGCTGGGATCTCACCTaGTTTAGCATAGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLGWDLT*FSIGER
Trigger: CCTCTCTCCTATGCTAAACAAGGTGAGATCCCAGCC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTCAGCACAGCAAGCAATaGCAGGTGTCATTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SLINSEENLALPLFSYEPQHSKQ*QVSFSP
Trigger: TGGAGAAAATGACACCTGCAATTGCTTGCTGTGCTG...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGCAGCACAGCAAGCAATaGCAGGTGTCATTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKQHSKQ*QVSFSP
Trigger: TGGAGAAAATGACACCTGCAATTGCTTGCTGTGCTG...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGGTTGAAGGCATGGGCTaGTGTGCATACAAACTGATC +
Preference number: 5 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKVEGMG*CAYKLI
Trigger: GATCAGTTTGTATGCACACAAGCCCATGCCTTCAAC...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTGTAGGCATTGTAGTTaGTGGACAGGAGAGGGGACT +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSACRHCS*WTGEGT
Trigger: AGTCCCCTCTCCTGTCCACAAACTACAATGCCTACA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS GCA 90 bp AAATATAATCAACTCGTCTATATCCAATCTTCCATCAAGCTCACATaGAAGGCAGGCCAATTCCCCAGTTACTCAGATGTCCGTCTTAGT +
Preference number: 5 (lower is better)
Translates to: KYNQLVYIQSSIKLT*KAGQFPSYSDVRLS
Trigger: ACTAAGACGGACATCTGAGTAACTGGGGAATTGGCCTGCCTTGCATGTGAGCTTGATGGAAGATTGGATATAGACGAGTTGATTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS GCA 90 bp AAATATAATCAACTCGTCTATATCCAATCTTCCATCAAGCTCACATaGAAGGCAGGCCAATTCCCCAGTTACTCAGATGTCCGTATTGGT +
Preference number: 5 (lower is better)
Translates to: KYNQLVYIQSSIKLT*KAGQFPSYSDVRIG
Trigger: ACCAATACGGACATCTGAGTAACTGGGGAATTGGCCTGCCTTGCATGTGAGCTTGATGGAAGATTGGATATAGACGAGTTGATTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS CCA 90 bp TTCCAGGTGCTTGAATTTGAGATAAAATCTGGAGGTGTATCTTTCTaGGGCTCGATCAGGGTCTCTGCTTTCATTCAAAGTTTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: FQVLEFEIKSGGVSF*GSIRVSAFIQSFSK
Trigger: TTTGGAGAAACTTTGAATGAAAGCAGAGACCCTGATCGAGCCCCAGAAAGATACACCTCCAGATTTTATCTCAAATTCAAGCACCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCTCACAGCCTTATCCTTaGGATCAACTTGTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: NMSKAPISHHSALVPAKFSQPYP*DQLVRK
Trigger: CTTTCTTACAAGTTGATCCAAAGGATAAGGCTGTGA...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGGGAACTGCGGACCCTaGTTCTCGAGGATAATAACG +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTGNCGP*FSRIIT
Trigger: CGTTATTATCCTCGAGAACAAGGGTCCGCAGTTCCC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATCACCTTTGCCATTCTaGCAGCAGCAATCGCAGTGT +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLSPLPF*QQQSQC
Trigger: ACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTGA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCCGCTCTCCCCTTCTTaGTCACCTTTGCCATTCTTG +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTPLSPS*SPLPFL
Trigger: CAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGGAGCTTCAGTTACCTaGTTGGGTTGTTACAGACAT +
Preference number: 5 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSGASVT*LGCYRH
Trigger: ATGTCTGTAACAACCCAACAAGGTAACTGAAGCTCC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGGGTATCTCTCTATCTaGAGGCCATTACAGTCAGGT +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAGYLSI*RPLQSG
Trigger: ACCTGACTGTAATGGCCTCAAGATAGAGAGATACCC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACCACGAACACTCCTTTaGCAGTGTTTAATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTPRTLL*QCLISC
Trigger: ACAGGAAATTAAACACTGCAAAAGGAGTGTTCGTGG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACTACCTGGACCTCACTaGATAACTCCACTCAAACTA +
Preference number: 5 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSLPGPH*ITPLKL
Trigger: TAGTTTGAGTGGAGTTATCAAGTGAGGTCCAGGTAG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAACTCATTTCCAGTGTaGCAGGCTACCTGGACCTCA +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLNSFPV*QATWTS
Trigger: TGAGGTCCAGGTAGCCTGCAACACTGGAAATGAGTT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTGTGGGGCATCAAGATaGCAAGACACCAACAATACC +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSACGASR*QDTNNT
Trigger: GGTATTGTTGGTGTCTTGCAATCTTGATGCCCCACA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGGAGTAAAGGAACTCTaGGCCTCTGCATATTCCCTA +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAGVKEL*ASAYSL
Trigger: TAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTAGACTTGTCACATGTTaGGAAACAAGGACTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SLINSEENLALPLFSYEPRLVTC*ETRTWE
Trigger: CTCCCAAGTCCTTGTTTCCAAACATGTGACAAGTCT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGTACTCACCAGATACTaGTTCTACAACATTATTGCC +
Preference number: 5 (lower is better)
Translates to: NMSKAPISHHSALVPAKFVLTRY*FYNIIA
Trigger: GGCAATAATGTTGTAGAACAAGTATCTGGTGAGTAC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTATGAAAAACCTTCCCTaGGAGTCCTTGGCTAGATCA +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAMKNLP*ESLARS
Trigger: TGATCTAGCCAAGGACTCCAAGGGAAGGTTTTTCAT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGAAGGAAGTTGGAACTTaGGCCATTTTAGTTAGACCC +
Preference number: 5 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKKEVGT*AILVRP
Trigger: GGGTCTAACTAAAATGGCCAAAGTTCCAACTTCCTT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATTAATGGAATCACCTTaGGGGCCATATACACCATTA +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTLMESP*GPYTPL
Trigger: TAATGGTGTATATGGCCCCAAAGGTGATTCCATTAA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACTACTGTTGATCAGCTaGGGAAACATCTTTAACAGG +
Preference number: 5 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSLLLIS*GNIFNR
Trigger: CCTGTTAAAGATGTTTCCCAAGCTGATCAACAGTAG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGATTTCTGAGAGCACTTaGTGGTCTACTGTTGATCAG +
Preference number: 5 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKISEST*WSTVDQ
Trigger: CTGATCAACAGTAGACCACAAAGTGCTCTCAGAAAT...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACACAGACAATGAAATCATaGGCCTGCTCAAAACACTTT +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTQTMKS*ACSKHF
Trigger: AAAGTGTTTTGAGCAGGCCAATGATTTCATTGTCTG...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGATGTCACAAGGAGCTaGATAATCCCTGGTCAGATG +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFDVTRS*IIPGQM
Trigger: CATCTGACCAGGGATTATCAAGCTCCTTGTGACATC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGATGTCACAAGGAGCTaGATAATCCCTGGTCAGATG +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLDVTRS*IIPGQM
Trigger: CATCTGACCAGGGATTATCAAGCTCCTTGTGACATC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AACATGAGCAAGGCCCCAATAAGTCACCACTCAGCATTAGTACCAGCAAAATTCGTATATATTTATATGTaGCTCAGGGCTGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: NMSKAPISHHSALVPAKFVYIYM*LRAVPS
Trigger: AGATGGAACAGCCCTGAGCAACATATAAATATATAC...GAATTTTGCTGGTACTAATGCTGAGTGGTGACTTATTGGGGCCTTGCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 90 bp TCAGATGTCCGTATTGGTTTTTACCATTATTGTCAGGTTTCATTGTaGAACTTGACTGAAATACACAGAGCTGCCAGATCTCCACTTCAT +
Preference number: 5 (lower is better)
Translates to: SDVRIGFYHYCQVSL*NLTEIHRAARSPLH
Trigger: ATGAAGTGGAGATCTGGCAGCTCTGTGTATTTCAGTCAAGTTCCACAATGAAACCTGACAATAATGGTAAAAACCAATACGGACATCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGAATTCATCTGGGCTTaGCTTGATTTCATCGGGGGT +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTEFIWA*LDFIGG
Trigger: ACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAAACCGATCTGGAATTTaGATTTTTAGGAAATCCTGG +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTNRSGI*IFRKSW
Trigger: CCAGGATTTCCTAAAAATCAAAATTCCAGATCGGTT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTCCAAACTTATGCCATaGGGCCAGATCTTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSASKLMP*GQIFFY
Trigger: GTAGAAAAAGATCTGGCCCAATGGCATAAGTTTGGA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCGGGTATCTCTCTATCTaGAGGCCATTACAGTCAGGT +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFGYLSI*RPLQSG
Trigger: ACCTGACTGTAATGGCCTCAAGATAGAGAGATACCC...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAGAAGGCAATCTAAGTaGGGGCTCTACACATGTGAT +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLRRQSK*GLYTCD
Trigger: ATCACATGTGTAGAGCCCCAACTTAGATTGCCTTCT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCACAGATCAGTTCATTTTaGATAGTGGGTAGAAGGACT +
Preference number: 5 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSQISSF*IVGRRT
Trigger: AGTCCTTCTACCCACTATCAAAAATGAACTGATCTG...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACATTCCCCCAAAATGAATaGGTTGGAATAGATACAACT +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTFPQNE*VGIDTT
Trigger: AGTTGTATCTATTCCAACCAATTCATTTTGGGGGAA...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCAAAATTTGGTTCCCATaGTGGGAGCTGGTGTCAAGT +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFKIWFP*WELVSS
Trigger: ACTTGACACCAGCTCCCACAATGGGAACCAAATTTT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTACTTTGTGGTCTACTGTaGATCAGCTTGGGAAACATC +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLLCGLL*ISLGNI
Trigger: GATGTTTCCCAAGCTGATCAACAGTAGACCACAAAG...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTCAGACAATGAAATCATaGGCCTGCTCAAAACACTTT +
Preference number: 5 (lower is better)
Translates to: SLINSEENLALPLFSYEPQTMKS*ACSKHF
Trigger: AAAGTGTTTTGAGCAGGCCAATGATTTCATTGTCTG...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAGTACTCACCAGATACTaGTTCTACAACATTATTGCC +
Preference number: 5 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSVLTRY*FYNIIA
Trigger: GGCAATAATGTTGTAGAACAAGTATCTGGTGAGTAC...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp CCCTTATTCAAGTACTGTGTGTTGTCCTTAGTTCCACAACAACACAGGAACACAATTCCAACAAATGGTTaGGATAAGAGAGCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: PLFKYCVLSLVPQQHRNTIPTNG*DKRASF
Trigger: AAAACTGGCTCTCTTATCCAAACCATTTGTTGGAAT...TGTGTTCCTGTGTTGTTGTGGAACTAAGGACAACACACAGTACTTGAATAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGAACAAGCAACACACCTGTGCCTATGGATAAAGATTCCTCTGAATCTAACAAGGCAGGGAATCTCTGTTaGCATAGGTTGACTTTAAAT +
Preference number: 5 (lower is better)
Translates to: RTSNTPVPMDKDSSESNKAGNLC*HRLTLN
Trigger: ATTTAAAGTCAACCTATGCAAACAGAGATTCCCTGC...CTTGTTAGATTCAGAGGAATCTTTATCCATAGGCACAGGTGTGTTGCTTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTGCAGGGAATCTCTGTTaGCATAGGTTGACTTTAAAT +
Preference number: 5 (lower is better)
Translates to: SLINSEENLALPLFSYEPAGNLC*HRLTLN
Trigger: ATTTAAAGTCAACCTATGCAAACAGAGATTCCCTGC...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCGTTGAAGGCATGGGCTaGTGTGCATACAAACTGATC +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFVEGMG*CAYKLI
Trigger: GATCAGTTTGTATGCACACAAGCCCATGCCTTCAAC...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTTTGGACGAATTATTTaGTGGGTTAGGTTCGACCCA +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAFGRII*WVRFDP
Trigger: TGGGTCGAACCTAACCCACAAAATAATTCGTCCAAA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS TCA 90 bp TATTGGTTTTTACCATTATTGTCAGGTTTCATTGTGGAACTTGACTaGAATACACAGAGCTGCCAGATCTCCACTTCATGTGATGCTTGT +
Preference number: 5 (lower is better)
Translates to: YWFLPLLSGFIVELD*NTQSCQISTSCDAC
Trigger: ACAAGCATCACATGAAGTGGAGATCTGGCAGCTCTGTGTATTTCAGTCAAGTTCCACAATGAAACCTGACAATAATGGTAAAAACCAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTATCCTTAGAAGAGAGTaGCAAGAGGTACCAGGACTT +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTILRRE*QEVPGL
Trigger: AAGTCCTGGTACCTCTTGCAACTCTCTTCTAAGGAT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTATGAAAAACCTTCCCTaGGAGTCCTTGGCTAGATCA +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTMKNLP*ESLARS
Trigger: TGATCTAGCCAAGGACTCCAAGGGAAGGTTTTTCAT...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTTCATCTGTATATTGGTaGATGAAAGATGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSASSVYW*MKDAVT
Trigger: GGTGACAGCATCTTTCATCAACCAATATACAGATGA...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGTCTAATAAACTCAGAGGAAAATCTGGCTCTGCCACTTTTTAGCTATGAGCCTATTAGGATGATGGTATaGCCATGTGCTATCAAGAAA +
Preference number: 5 (lower is better)
Translates to: SLINSEENLALPLFSYEPIRMMV*PCAIKK
Trigger: TTTCTTGATAGCACATGGCAATACCATCATCCTAAT...AGGCTCATAGCTAAAAAGTGGCAGAGCCAGATTTTCCTCTGAGTTTATTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCTACCTGGACCTCACTaGATAACTCCACTCAAACTA +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFLPGPH*ITPLKL
Trigger: TAGTTTGAGTGGAGTTATCAAGTGAGGTCCAGGTAG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCAGAAGGCAATCTAAGTaGGGGCTCTACACATGTGAT +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFRRQSK*GLYTCD
Trigger: ATCACATGTGTAGAGCCCCAACTTAGATTGCCTTCT...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCATTTCTGAGAGCACTTaGTGGTCTACTGTTGATCAG +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFISEST*WSTVDQ
Trigger: CTGATCAACAGTAGACCACAAAGTGCTCTCAGAAAT...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTGACTTGTGCTTAGACTaGTCACATGTTTGGAAACAA +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSADLCLD*SHVWKQ
Trigger: TTGTTTCCAAACATGTGACAAGTCTAAGCACAAGTC...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCCTCAGTAGCAAGGACTaGTGCTTAGACTTGTCACAT +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFLSSKD*CLDLSH
Trigger: ATGTGACAAGTCTAAGCACAAGTCCTTGCTACTGAG...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCTCAGTAGCAAGGACTaGTGCTTAGACTTGTCACAT +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTLSSKD*CLDLSH
Trigger: ATGTGACAAGTCTAAGCACAAGTCCTTGCTACTGAG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp AGGAGTAAAGGAACTCTTGGCCTCTGCATATTCCCTAAACAGCAGAATTTTTCAAAAGAAAAGAGTAGTTaGTTTCCATTGGCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: RSKGTLGLCIFPKQQNFSKEKSS*FPLAVR
Trigger: TCTCACTGCCAATGGAAACAAACTACTCTTTTCTTT...TGAAAAATTCTGCTGTTTAGGGAATATGCAGAGGCCAAGAGTTCCTTTACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTCACAGCCTTATCCTTaGGATCAACTTGTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFSQPYP*DQLVRK
Trigger: CTTTCTTACAAGTTGATCCAAAGGATAAGGCTGTGA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATCATCTGTATATTGGTaGATGAAAGATGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLSSVYW*MKDAVT
Trigger: GGTGACAGCATCTTTCATCAACCAATATACAGATGA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTCCAAACTTATGCCATaGGGCCAGATCTTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFSKLMP*GQIFFY
Trigger: GTAGAAAAAGATCTGGCCCAATGGCATAAGTTTGGA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTATTAGGATGATGGTATaGCCATGTGCTATCAAGAAA +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAIRMMV*PCAIKK
Trigger: TTTCTTGATAGCACATGGCAATACCATCATCCTAAT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGTGATTCCCCATTCATaGTATCCACTCAATACTACT +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFVIPHS*YPLNTT
Trigger: AGTAGTATTGAGTGGATACAATGAATGGGGAATCAC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTACATCAGTGCATATTTaGGAAGCCACTTCATTTCAT +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSATSVHI*EATSFH
Trigger: ATGAAATGAAGTGGCTTCCAAAATATGCACTGATGT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTCCCTTCGTTTTTCTTTaGAAAATTGGTATGTCAGGT +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSAPFVFL*KIGMSG
Trigger: ACCTGACATACCAATTTTCAAAAGAAAAACGAAGGG...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCCAAGAGAAACATTTTTaGAACATTAGGAAGCCGGGA +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFQEKHF*NIRKPG
Trigger: TCCCGGCTTCCTAATGTTCAAAAAATGTTTCTCTTG...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp TGTGATACACATACACACATGCACACACACGCAATAAAACAAATTAGGAGTGCTACTCAGATGTCCGTATaGGTTTTTACCATTATTGTC +
Preference number: 5 (lower is better)
Translates to: CDTHTHMHTHAIKQIRSATQMSV*VFTIIV
Trigger: GACAATAATGGTAAAAACCAATACGGACATCTGAGT...AGCACTCCTAATTTGTTTTATTGCGTGTGTGTGCATGTGTGTATGTGTATCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTATTAGTTGTGCTTGTGTaGCACAAATACTCATGCATA +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLLVVLV*HKYSCI
Trigger: TATGCATGAGTATTTGTGCAACACAAGCACAACTAA...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCGATGATGAGAGTCATTaGATGTTAGAAAGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFDDESH*MLESVV
Trigger: CACAACACTTTCTAACATCAAATGACTCTCATCATC...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTTCAAGTACTGTGTGTaGTCCTTAGTTCCACAACAA +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFFKYCV*SLVPQQ
Trigger: TTGTTGTGGAACTAAGGACAACACACAGTACTTGAA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACATTTATCTGCCACAGAGTCACCATAAGGAAAAATAAACTCCCTTCGTTTTTCTTCCCCCAAAATGAATaGGTTGGAATAGATACAACT +
Preference number: 5 (lower is better)
Translates to: TFICHRVTIRKNKLPSFFFPQNE*VGIDTT
Trigger: AGTTGTATCTATTCCAACCAATTCATTTTGGGGGAA...GAAAAACGAAGGGAGTTTATTTTTCCTTATGGTGACTCTGTGGCAGATAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTTTAATGGAATCACCTTaGGGGCCATATACACCATTA +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTLMESP*GPYTPL
Trigger: TAATGGTGTATATGGCCCCAAAGGTGATTCCATTAA...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCGACTTGTGCTTAGACTaGTCACATGTTTGGAAACAA +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFDLCLD*SHVWKQ
Trigger: TTGTTTCCAAACATGTGACAAGTCTAAGCACAAGTC...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAATTCCAACAAATGGTTaGGATAAGAGAGCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLIPTNG*DKRASF
Trigger: AAAACTGGCTCTCTTATCCAAACCATTTGTTGGAAT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAGTATATATTTATATGTaGCTCAGGGCTGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLVYIYM*LRAVPS
Trigger: AGATGGAACAGCCCTGAGCAACATATAAATATATAC...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAATGGCCCATGCTAAACCTATAAACCAGCATGCAAATTGGCAAAAACATTTAAAAGAAAAGAGTAGTTaGTTTCCATTGGCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: EMAHAKPINQHANWQKHLKEKSS*FPLAVR
Trigger: TCTCACTGCCAATGGAAACAAACTACTCTTTTCTTT...TAAATGTTTTTGCCAATTTGCATGCTGGTTTATAGGTTTAGCATGGGCCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTGTTTCATTGTGGAACTaGACTGAAATACACAGAGCT +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTVSLWN*TEIHRA
Trigger: AGCTCTGTGTATTTCAGTCAAGTTCCACAATGAAAC...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCAACACAATAATCATTaGACCAAAGTGAGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTQHNNH*TKVSFR
Trigger: CCTGAAACTCACTTTGGTCAAATGATTATTGTGTTG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp GAAAAAGAATCTCCATTCCAACGTATACAGCAAGATGAGAATAATAGGCATTTCTATAAGAATCAAAATTaGGTTCCCATTGTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: EKESPFQRIQQDENNRHFYKNQN*VPIVGA
Trigger: AGCTCCCACAATGGGAACCAAATTTTGATTCTTATA...GAAATGCCTATTATTCTCATCTTGCTGTATACGTTGGAATGGAGATTCTTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTCCCTTCGTTTTTCTTTaGAAAATTGGTATGTCAGGT +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTPFVFL*KIGMSG
Trigger: ACCTGACATACCAATTTTCAAAAGAAAAACGAAGGG...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS-3UTR CAA 90 bp ACTAAGATTACTAAGTTCCTTCAGCCAACACAAAGATTCCTGATTTTACAGACTTTCATTGGGTGTCACTaGTTATTCATCAATGTGCAA +
Preference number: 5 (lower is better)
Translates to: TKITKFLQPTQRFLILQTFIGCH*LFINVQ
Trigger: TTGCACATTGATGAATAACAAGTGACACCCAATGAA...AGTCTGTAAAATCAGGAATCTTTGTGTTGGCTGAAGGAACTTAGTAATCTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 72 bp GGGGGCCCGGGGCTCCGGCTTCTCTGGCGGCGGAGCTaGGTGGTTCCACAGTTCCCAGTGCAGTTCGGATGC +
Preference number: 6 (lower is better)
Translates to: GGPGLRLLWRRS*VVPQFPVQFGC
Trigger: GCATCCGAACTGCACTGGGAACTGTGGAACCACCCAGCTCCGCCGCCAGAGAAGCCGGAGCCCCGGGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS CCA 72 bp GGCAAGGGCAAACGGACTCCCATGTTCCCAGCCAGGTaGGAGCCGGTGCGAGCCAGAGGCCAACGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: GKGKRTPMFPAR*EPVRARGQRSA
Trigger: TGCGCTGCGTTGGCCTCTGGCTCGCACCGGCTCCCACCTGGCTGGGAACATGGGAGTCCGTTTGCCCTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS GCA 72 bp ATGTGCCCTGCTAGGGTCCCAGGTAGCCACCCCACCTaGCGGCAAGGGCAAACGGACTCCCATGTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: MCPARVPGSHPT*RQGQTDSHVPS
Trigger: GCTGGGAACATGGGAGTCCGTTTGCCCTTGCCGGCAGGTGGGGTGGCTACCTGGGACCCTAGCAGGGCACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS CAA 90 bp AGCTGGACAGGGCCCTTCTTGATGGGACGGTCCAGAGTCTGGATGTaGGTCTGGCGTGTCACGGGACCACAGATGACCGTCTCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: SWTGPFLMGRSRVWM*VWRVTGPQMTVSWG
Trigger: TCCCCAGGAGACGGTCATCTGTGGTCCCGTGACACGCCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 72 bp GGGCCCTTCTTGATGGGACGGTCCAGAGTCTGGATGTaGGTCTGGCGTGTCACGGGACCACAGATGACCGTC +
Preference number: 6 (lower is better)
Translates to: GPFLMGRSRVWM*VWRVTGPQMTV
Trigger: GACGGTCATCTGTGGTCCCGTGACACGCCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 72 bp TGGACAGGGCCCTTCTTGATGGGACGGTCCAGAGTCTaGATGTTGGTCTGGCGTGTCACGGGACCACAGATG +
Preference number: 6 (lower is better)
Translates to: WTGPFLMGRSRV*MLVWRVTGPQM
Trigger: CATCTGTGGTCCCGTGACACGCCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp TTCCGCCGCATCTCTGACTGTTGGATCAGCTGGACAGGGCCCTTCTaGATGGGACGGTCCAGAGTCTGGATGTTGGTCTGGCGTGTCACG +
Preference number: 6 (lower is better)
Translates to: FRRISDCWISWTGPF*MGRSRVWMLVWRVT
Trigger: CGTGACACGCCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTCAGAGATGCGGCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 72 bp TTCTTGATGGGACGGTCCAGAGTCTGGATGTTGGTCTaGCGTGTCACGGGACCACAGATGACCGTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: FLMGRSRVWMLV*RVTGPQMTVSW
Trigger: CCAGGAGACGGTCATCTGTGGTCCCGTGACACGCCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 72 bp TCGCTTTTCCGCCGCATCTCTGACTGTTGGATCAGCTaGACAGGGCCCTTCTTGATGGGACGGTCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: SLFRRISDCWIS*TGPFLMGRSRV
Trigger: GACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTCAGAGATGCGGCGGAAAAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 72 bp CGGAGTAAGTCGCTTTTCCGCCGCATCTCTGACTGTTaGATCAGCTGGACAGGGCCCTTCTTGATGGGACGG +
Preference number: 6 (lower is better)
Translates to: RSKSLFRRISDC*ISWTGPFLMGR
Trigger: CCGTCCCATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTCAGAGATGCGGCGGAAAAGCGACTTACTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp GAGCTGGCCTCAGACTGGCTGTCGCAGCTAGATGTGGAGAGGTCATaGCAAGACGTGCCGCTCTCCCCTTCTTTGTCACCTTTGCCATTC +
Preference number: 6 (lower is better)
Translates to: ELASDWLSQLDVERS*QDVPLSPSLSPLPF
Trigger: GAATGGCAAAGGTGACAAAGAAGGGGAGAGCGGCACGTCTTGCAATGACCTCTCCACATCTAGCTGCGACAGCCAGTCTGAGGCCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS TCA 72 bp TCTCTGACTGTTGGATCAGCTGGACAGGGCCCTTCTTaGTGGGACGGTCCAGAGTCTGGATGTTGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: SLTVGSAGQGPS*WDGPESGCWSG
Trigger: GCCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 72 bp TGCCGCTCTCCCCTTCTTTGTCACCTTTGCCATTCTTaGAGCAGCAATCGCAGTGTGAGGGTGACCATCTGG +
Preference number: 6 (lower is better)
Translates to: CRSPLLCHLCHS*SSNRSVRVTIW
Trigger: CCAGATGGTCACCCTCACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 72 bp TGCAAGACGTGCCGCTCTCCCCTTCTTTGTCACCTTTaGCATTCTTGCAGCAGCAATCGCAGTGTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: CKTCRSPLLCHL*HSCSSNRSVRV
Trigger: CACCCTCACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGGCACGTCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 72 bp TTCCACAAACCAAAATCCGGGGAACTCTCCGAAACTTaGCATCTGCCTGTCCCTCTCTGCCCAAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: FHKPKSGELSET*HLPVPLCPRCR
Trigger: CCTGCACCTTGGGCAGAGAGGGACAGGCAGATGCCAAGTTTCGGAGAGTTCCCCGGATTTTGGTTTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 72 bp CTTCCACAAACCAAAATCCGGGGAACTCTCCGAAACTaGGCATCTGCCTGTCCCTCTCTGCCCAAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: LPQTKIRGTLRN*ASACPSLPKVQ
Trigger: CTGCACCTTGGGCAGAGAGGGACAGGCAGATGCCAAGTTTCGGAGAGTTCCCCGGATTTTGGTTTGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 72 bp TCAGACTGGCTGTCGCAGCTAGATGTGGAGAGGTCATaGCAAGACGTGCCGCTCTCCCCTTCTTTGTCACCT +
Preference number: 6 (lower is better)
Translates to: SDWLSQLDVERS*QDVPLSPSLSP
Trigger: AGGTGACAAAGAAGGGGAGAGCGGCACGTCTTGCAATGACCTCTCCACATCTAGCTGCGACAGCCAGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 72 bp ATCTCTGACTGTTGGATCAGCTGGACAGGGCCCTTCTaGATGGGACGGTCCAGAGTCTGGATGTTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: ISDCWISWTGPF*MGRSRVWMLVW
Trigger: CCAGACCAACATCCAGACTCTGGACCGTCCCATCAAGAAGGGCCCTGTCCAGCTGATCCAACAGTCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp TTGCAAGACGTGCCGCTCTCCCCTTCTTTGTCACCTTTGCCATTCTaGCAGCAGCAATCGCAGTGTGAGGGTGACCATCTGGAAGGCTCA +
Preference number: 6 (lower is better)
Translates to: LQDVPLSPSLSPLPF*QQQSQCEGDHLEGS
Trigger: TGAGCCTTCCAGATGGTCACCCTCACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGGCACGTCTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp GAGAGGTCATTGCAAGACGTGCCGCTCTCCCCTTCTTTGTCACCTTaGCCATTCTTGCAGCAGCAATCGCAGTGTGAGGGTGACCATCTG +
Preference number: 6 (lower is better)
Translates to: ERSLQDVPLSPSLSP*PFLQQQSQCEGDHL
Trigger: CAGATGGTCACCCTCACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGGCACGTCTTGCAATGACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 72 bp AGCTGGGTGGTTCCACAGTTCCCAGTGCAGTTCGGATaGTGTTGTTTCAGCAGTGCAGGCAAGAAACCATCC +
Preference number: 6 (lower is better)
Translates to: SWVVPQFPVQFG*CCFSSAGKKPS
Trigger: GGATGGTTTCTTGCCTGCACTGCTGAAACAACAGCATCCGAACTGCACTGGGAACTGTGGAACCACCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS CAA 72 bp GAGAGGTCATTGCAAGACGTGCCGCTCTCCCCTTCTTaGTCACCTTTGCCATTCTTGCAGCAGCAATCGCAG +
Preference number: 6 (lower is better)
Translates to: ERSLQDVPLSPS*SPLPFLQQQSQ
Trigger: CTGCGATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGGCACGTCTTGCAATGACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp AAGGAAATCCTTCCACAAACCAAAATCCGGGGAACTCTCCGAAACTaGGCATCTGCCTGTCCCTCTCTGCCCAAGGTGCAGGATCCTCTG +
Preference number: 6 (lower is better)
Translates to: KEILPQTKIRGTLRN*ASACPSLPKVQDPL
Trigger: CAGAGGATCCTGCACCTTGGGCAGAGAGGGACAGGCAGATGCCAAGTTTCGGAGAGTTCCCCGGATTTTGGTTTGTGGAAGGATTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp CTAGATGTGGAGAGGTCATTGCAAGACGTGCCGCTCTCCCCTTCTTaGTCACCTTTGCCATTCTTGCAGCAGCAATCGCAGTGTGAGGGT +
Preference number: 6 (lower is better)
Translates to: LDVERSLQDVPLSPS*SPLPFLQQQSQCEG
Trigger: ACCCTCACACTGCGATTGCTGCTGCAAGAATGGCAAAGGTGACAAAGAAGGGGAGAGCGGCACGTCTTGCAATGACCTCTCCACATCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp GAGGCATCTTCAAAGTCACTGTGGCAGAATTCATCTGGGCTTTGCTaGATTTCATCGGGGGTCAGGAGTTTGACCAAGTCTGGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: EASSKSLWQNSSGLC*ISSGVRSLTKSGSW
Trigger: CCAGCTCCCAGACTTGGTCAAACTCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTCTGCCACAGTGACTTTGAAGATGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 72 bp TCTGGGCTTTGCTTGATTTCATCGGGGGTCAGGAGTTaGACCAAGTCTGGGAGCTGGAAGTATTCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SGLCLISSGVRS*TKSGSWKYSAS
Trigger: GGAAGCTGAATACTTCCAGCTCCCAGACTTGGTCAAACTCCTGACCCCCGATGAAATCAAGCAAAGCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp ATTCAGCTCTACCACCTCAGGGAAGGAGTTGGGAACTGCGGACCCTaGTTCTCGAGGATAATAACGACTACAGTTTCCACTCAGAGCCAT +
Preference number: 6 (lower is better)
Translates to: IQLYHLREGVGNCGP*FSRIITTTVSTQSH
Trigger: ATGGCTCTGAGTGGAAACTGTAGTCGTTATTATCCTCGAGAACAAGGGTCCGCAGTTCCCAACTCCTTCCCTGAGGTGGTAGAGCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp TTGGGAGGCATCTTCAAAGTCACTGTGGCAGAATTCATCTGGGCTTaGCTTGATTTCATCGGGGGTCAGGAGTTTGACCAAGTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: LGGIFKVTVAEFIWA*LDFIGGQEFDQVWE
Trigger: CTCCCAGACTTGGTCAAACTCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTCTGCCACAGTGACTTTGAAGATGCCTCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 72 bp ATTCAGCTCTACCACCTCAGGGAAGGAGTTGGGAACTaGGGACCCTTGTTCTCGAGGATAATAACGACTACA +
Preference number: 6 (lower is better)
Translates to: IQLYHLREGVGN*GPLFSRIITTT
Trigger: TGTAGTCGTTATTATCCTCGAGAACAAGGGTCCGCAGTTCCCAACTCCTTCCCTGAGGTGGTAGAGCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 72 bp TACCACCTCAGGGAAGGAGTTGGGAACTGCGGACCCTaGTTCTCGAGGATAATAACGACTACAGTTTCCACT +
Preference number: 6 (lower is better)
Translates to: YHLREGVGNCGP*FSRIITTTVST
Trigger: AGTGGAAACTGTAGTCGTTATTATCCTCGAGAACAAGGGTCCGCAGTTCCCAACTCCTTCCCTGAGGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS TCA 72 bp CTGGAAAGTGATCAGGCAGGACCACCTGCCTGTCCCTaGGATAGTCCAGAATATAACGGAACAAGAATCCAT +
Preference number: 6 (lower is better)
Translates to: LESDQAGPPACP*DSPEYNGTRIH
Trigger: ATGGATTCTTGTTCCGTTATATTCTGGACTATCTCAGGGACAGGCAGGTGGTCCTGCCTGATCACTTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CCA 72 bp GGAGGCATCTTCAAAGTCACTGTGGCAGAATTCATCTaGGCTTTGCTTGATTTCATCGGGGGTCAGGAGTTT +
Preference number: 6 (lower is better)
Translates to: GGIFKVTVAEFI*ALLDFIGGQEF
Trigger: AAACTCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTCTGCCACAGTGACTTTGAAGATGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp CAGAATTCATCTGGGCTTTGCTTGATTTCATCGGGGGTCAGGAGTTaGACCAAGTCTGGGAGCTGGAAGTATTCAGCTTCCCTTTTCAGT +
Preference number: 6 (lower is better)
Translates to: QNSSGLCLISSGVRS*TKSGSWKYSASLFS
Trigger: ACTGAAAAGGGAAGCTGAATACTTCCAGCTCCCAGACTTGGTCAAACTCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 72 bp CAACTCGTCTATATCCAATCTTCCATCAAGCTCACATaGAAGGCAGGCCAATTCCCCAGTTACTCAGATGTC +
Preference number: 6 (lower is better)
Translates to: QLVYIQSSIKLT*KAGQFPSYSDV
Trigger: GACATCTGAGTAACTGGGGAATTGGCCTGCCTTGCATGTGAGCTTGATGGAAGATTGGATATAGACGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 72 bp TCTTCAAAGTCACTGTGGCAGAATTCATCTGGGCTTTaGTTGATTTCATCGGGGGTCAGGAGTTTGACCAAG +
Preference number: 6 (lower is better)
Translates to: SSKSLWQNSSGL*LISSGVRSLTK
Trigger: CTTGGTCAAACTCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTCTGCCACAGTGACTTTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 72 bp ATCTTCAAAGTCACTGTGGCAGAATTCATCTGGGCTTaGCTTGATTTCATCGGGGGTCAGGAGTTTGACCAA +
Preference number: 6 (lower is better)
Translates to: IFKVTVAEFIWA*LDFIGGQEFDQ
Trigger: TTGGTCAAACTCCTGACCCCCGATGAAATCAAGCAAAGCCCAGATGAATTCTGCCACAGTGACTTTGAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 72 bp TGGAGGTGTATCTTTCTGGGGCTCGATCAGGGTCTCTaGTTTCATTCAAAGTTTCTCCAAAGACTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: WRCIFLGLDQGL*FHSKFLQRLLL
Trigger: CAAAAGAAGTCTTTGGAGAAACTTTGAATGAAAGCAGAGACCCTGATCGAGCCCCAGAAAGATACACCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS TCA 72 bp AACACTTTAGCACAGTGCTTGAATCACAGTAAATGCTaGCACCGAGGCATTGTAGGCATTGTAGTTTGTGGA +
Preference number: 6 (lower is better)
Translates to: NTLAQCLNHSKC*HRGIVGIVVCG
Trigger: TCCACAAACTACAATGCCTACAATGCCTCGGTGTCAGCATTTACTGTGATTCAAGCACTGTGCTAAAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS GCA 72 bp CCCAAACAGGTAAACGACCGAGGTATCAATGAAAAGTaGCAGAGAGGTGTGCTCTTGGAAAATAACTATTAT +
Preference number: 6 (lower is better)
Translates to: PKQVNDRGINEK*QRGVLLENNYY
Trigger: ATAATAGTTATTTTCCAAGAGCACACCTCTCTGGCACTTTTCATTGATACCTCGGTCGTTTACCTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS CCA 72 bp CTTGAATTTGAGATAAAATCTGGAGGTGTATCTTTCTaGGGCTCGATCAGGGTCTCTGCTTTCATTCAAAGT +
Preference number: 6 (lower is better)
Translates to: LEFEIKSGGVSF*GSIRVSAFIQS
Trigger: ACTTTGAATGAAAGCAGAGACCCTGATCGAGCCCCAGAAAGATACACCTCCAGATTTTATCTCAAATTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS CAA 90 bp GTCCGTATTGGTTTTTACCATTATTGTCAGGTTTCATTGTGGAACTaGACTGAAATACACAGAGCTGCCAGATCTCCACTTCATGTGATG +
Preference number: 6 (lower is better)
Translates to: VRIGFYHYCQVSLWN*TEIHRAARSPLHVM
Trigger: CATCACATGAAGTGGAGATCTGGCAGCTCTGTGTATTTCAGTCAAGTTCCACAATGAAACCTGACAATAATGGTAAAAACCAATACGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS TCA 72 bp TTACCATTATTGTCAGGTTTCATTGTGGAACTTGACTaGAATACACAGAGCTGCCAGATCTCCACTTCATGT +
Preference number: 6 (lower is better)
Translates to: LPLLSGFIVELD*NTQSCQISTSC
Trigger: ACATGAAGTGGAGATCTGGCAGCTCTGTGTATTTCAGTCAAGTTCCACAATGAAACCTGACAATAATGGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS TCA 72 bp GTTTTTACCATTATTGTCAGGTTTCATTGTGGAACTTaGCTGAAATACACAGAGCTGCCAGATCTCCACTTC +
Preference number: 6 (lower is better)
Translates to: VFTIIVRFHCGT*LKYTELPDLHF
Trigger: GAAGTGGAGATCTGGCAGCTCTGTGTATTTCAGTCAAGTTCCACAATGAAACCTGACAATAATGGTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS CAA 72 bp GGTTTTTACCATTATTGTCAGGTTTCATTGTGGAACTaGACTGAAATACACAGAGCTGCCAGATCTCCACTT +
Preference number: 6 (lower is better)
Translates to: GFYHYCQVSLWN*TEIHRAARSPL
Trigger: AAGTGGAGATCTGGCAGCTCTGTGTATTTCAGTCAAGTTCCACAATGAAACCTGACAATAATGGTAAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS CCA 72 bp CGTATTGGTTTTTACCATTATTGTCAGGTTTCATTGTaGAACTTGACTGAAATACACAGAGCTGCCAGATCT +
Preference number: 6 (lower is better)
Translates to: RIGFYHYCQVSL*NLTEIHRAARS
Trigger: AGATCTGGCAGCTCTGTGTATTTCAGTCAAGTTCCACAATGAAACCTGACAATAATGGTAAAAACCAATACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512467.6
CDS CAA 72 bp CAAGGATGTTTTCTCTCAGGAAACCGATCTGGAATTTaGATTTTTAGGAAATCCTGGATACATTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: QGCFLSGNRSGI*IFRKSWIHFSS
Trigger: GCTGGAGAAATGTATCCAGGATTTCCTAAAAATCAAAATTCCAGATCGGTTTCCTGAGAGAAAACATCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507359.3
ENST00000512467.6
CDS GCA 72 bp AAAAGAAATCTTTGGAAAGGATCCTTAGAAGAGAGTTaGAAGAGGTACCAGGACTTAGAAGCTTTTCAGAAA +
Preference number: 6 (lower is better)
Translates to: KRNLWKGSLEES*KRYQDLEAFQK
Trigger: TTTCTGAAAAGCTTCTAAGTCCTGGTACCTCTTGCAACTCTCTTCTAAGGATCCTTTCCAAAGATTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507359.3
CDS CAA 72 bp AAAAAGAAATCTTTGGAAAGGATCCTTAGAAGAGAGTaGCAAGAGGTACCAGGACTTAGAAGCTTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: KKKSLERILRRE*QEVPGLRSFSE
Trigger: TTCTGAAAAGCTTCTAAGTCCTGGTACCTCTTGCAACTCTCTTCTAAGGATCCTTTCCAAAGATTTCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507359.3