RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCTD11 (Homo sapiens)

Ensembl gene IDs: ENSG00000213859

Ensembl transcript IDs: ENST00000333751.8, ENST00000576980.2, ENST00000672140.1, ENST00000673447.2

Found 485 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATaGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCC +
Preference number: 1 (lower is better)
Translates to: GRPWAFPSYLLATGP*LPQQPRVPYRPQRP
Trigger: GGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR GCA 90 bp AAGGCCAGGACCCACAGATACTACCCTCTTCCCCCTGGCCAGCCCTaGCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCC +
Preference number: 1 (lower is better)
Translates to: KARTHRYYPLPPGQP*HQYGILPDEGCSSP
Trigger: GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAAGAGGGTAGTATCTGTGGGTCCTGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR GCA 90 bp CCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATaGTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATACAT +
Preference number: 1 (lower is better)
Translates to: PGQPCHQYGILPDEG*SSPIAMGTVLAPIH
Trigger: ATGTATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR TCA 90 bp TGTGAGTCCTTGGTGGGCTCAGGTTTGGGAATTCCTGCCCACATCTaGGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTCATAGCTCCT +
Preference number: 1 (lower is better)
Translates to: CESLVGSGLGIPAHI*APVRCRRVPTLIAP
Trigger: AGGAGCTATGAGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAAGGACTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 90 bp CAGGGTCAGCACAGGTTGAGACCTTCTGGACCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAATTCCTGCCCACATCTGAGCTCCAG +
Preference number: 1 (lower is better)
Translates to: QGQHRLRPSGPLVSP*WAQVWEFLPTSELQ
Trigger: CTGGAGCTCAGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 90 bp GAACCTTCCCTACCCCTCCCAGGGTCAGCACAGGTTGAGACCTTCTaGACCACTTGTGAGTCCTTGGTGGGCTCAGGTTTGGGAATTCCT +
Preference number: 1 (lower is better)
Translates to: EPSLPLPGSAQVETF*TTCESLVGSGLGIP
Trigger: AGGAATTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCTGGGAGGGGTAGGGAAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR TCA 90 bp GCTAAGCCCAGTGACTTCTCTTACCTCTCACCAGGAAGATCCCAGTaGCTCAAACCCCAACAGGCCCCTCCTGGCTACGTGGTGATGCAT +
Preference number: 1 (lower is better)
Translates to: AKPSDFSYLSPGRSQ*LKPQQAPPGYVVMH
Trigger: ATGCATCACCACGTAGCCAGGAGGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAGTCACTGGGCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 90 bp GGTCAGCACAGGTTGAGACCTTCTGGACCACTTGTGAGTCCTTGGTaGGCTCAGGTTTGGGAATTCCTGCCCACATCTGAGCTCCAGTCA +
Preference number: 1 (lower is better)
Translates to: GQHRLRPSGPLVSPW*AQVWEFLPTSELQS
Trigger: TGACTGGAGCTCAGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 90 bp CAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTaGTCAGGCCAGGCCAGGCCACCCAGCTTCAGGAGTAGAAGCCAT +
Preference number: 1 (lower is better)
Translates to: QRTPLPMFQSVLASH*SGQARPPSFRSRSH
Trigger: ATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGCCTGGCCTGACCAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 90 bp ACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTaGACATGCGGACATCACAGACACTGTAGTCAGCAACACAGATAT +
Preference number: 1 (lower is better)
Translates to: THPVPEESLGNPKQA*TCGHHRHCSQQHRY
Trigger: ATATCTGTGTTGCTGACTACAGTGTCTGTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR GCA 90 bp GGACATCACAGACACTGTAGTCAGCAACACAGATATGAACCAGGATaGCAGGGACCTATACATCAGTCAGCCACACGGGCTGATATGCAC +
Preference number: 1 (lower is better)
Translates to: GHHRHCSQQHRYEPG*QGPIHQSATRADMH
Trigger: GTGCATATCAGCCCGTGTGGCTGACTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTGTCTGTGATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR GCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTATGCTCCAGCCCCATTaGCATGGGGACTGTCCTAGC +
Preference number: 2 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVMLQPH*HGDCPS
Trigger: GCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCAT...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CAA 90 bp CGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTaGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: RPWAFPSYLLATGPW*PQQPRVPYRPQRPS
Trigger: GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTTGGGATTCTTCCAGATaGGGGATGCTCCAGCCCCAT +
Preference number: 2 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVWDSSR*GMLQPH
Trigger: ATGGGGCTGGAGCATCCCTCATCTGGAAGAATCCCA...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTGTCAGCCACACGGGCTaGTATGCACGCACACATGAA +
Preference number: 2 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVVSHTG*YARTHE
Trigger: TTCATGTGTGCGTGCATATCAGCCCGTGTGGCTGAC...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAGGGTCAGCACAGGTTaGGACCTTCTGGACCACTTG +
Preference number: 2 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGRVSTG*DLLDHL
Trigger: CAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCT...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR GCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTAGGAGAGACTGGAGGTaGTCAGCCTTAGGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVRRDWR*SALGKN
Trigger: GTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR GCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACCCCCCTGGCCAGCCCTaGCATCAGTATGGGATTCTT +
Preference number: 2 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHPPGQP*HQYGIL
Trigger: AAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGG...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTCCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVPLVSP*WAQVWE
Trigger: TTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGG...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCAGGGTCAGCACAGGTTaGGACCTTCTGGACCACTTG +
Preference number: 2 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSRVSTG*DLLDHL
Trigger: CAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCT...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGTCAGCAACACAGATATaGACCAGGATGCCAGGGACC +
Preference number: 2 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWSATQI*TRMPGT
Trigger: GGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGA...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCTGGTGGGCTCAGGTTTaGGAATTCCTGCCCACATCT +
Preference number: 2 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPWWAQV*EFLPTS
Trigger: AGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCA...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCTGGTGGGCTCAGGTTTaGGAATTCCTGCCCACATCT +
Preference number: 2 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPWWAQV*EFLPTS
Trigger: AGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCA...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTTACATCAACCTAGGGTaGGTTGTGGCCTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVYINLG*VVAFLP
Trigger: AGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTA...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACTCAGCAACACAGATATaGACCAGGATGCCAGGGACC +
Preference number: 2 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHSATQI*TRMPGT
Trigger: GGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGA...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCCCAGGAAGATCCCAGTaGCTCAAACCCCAACAGGCC +
Preference number: 2 (lower is better)
Translates to: MVASATKSSIQASEAQLSPGRSQ*LKPQQA
Trigger: GGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGG...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTTTGCTAGGTCTAGTCTaGGTAAAGAGATGTTCCCCC +
Preference number: 2 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVLLGLV*VKRCSP
Trigger: GGGGGAACATCTCTTTACCCAGACTAGACCTAGCAA...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACTGTTCCAGAGTGTTCTaGCCTCTCATTGGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHCSRVF*PLIGQA
Trigger: GGCCTGACCAATGAGAGGCCAGAACACTCTGGAACA...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCAACCCCAAACAGGCCTaGACATGCGGACATCACAGA +
Preference number: 2 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSNPKQA*TCGHHR
Trigger: TCTGTGATGTCCGCATGTCCAGGCCTGTTTGGGGTT...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTGACTCTCATAGCTCCTaGAGCAGAGCTGGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: FPLASPAISMGFFQMRDADSHSS*SRAGKR
Trigger: CCTCTTTCCAGCTCTGCTTCAGGAGCTATGAGAGTC...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCGTCAGCCACACGGGCTaGTATGCACGCACACATGAA +
Preference number: 2 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPVSHTG*YARTHE
Trigger: TTCATGTGTGCGTGCATATCAGCCCGTGTGGCTGAC...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACCAGGTTGAGACCTTCTaGACCACTTGTGAGTCCTTG +
Preference number: 2 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHQVETF*TTCESL
Trigger: CAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTG...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCAAATCAAGGAGAGACTaGAGGTGCTCAGCCTTAGGC +
Preference number: 2 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSKSRRD*RCSALG
Trigger: GCCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTT...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGTTGCTAGGTCTAGTCTaGGTAAAGAGATGTTCCCCC +
Preference number: 2 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGLLGLV*VKRCSP
Trigger: GGGGGAACATCTCTTTACCCAGACTAGACCTAGCAA...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCGACTCTCATAGCTCCTaGAGCAGAGCTGGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: MVASATKSSIQASEAQLSDSHSS*SRAGKR
Trigger: CCTCTTTCCAGCTCTGCTTCAGGAGCTATGAGAGTC...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCCAAGCCCTTAAACACTaGGCTCCAAATCAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSQALKH*APNQGE
Trigger: CTCTCCTTGATTTGGAGCTCAGTGTTTAAGGGCTTG...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR GCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAAAGGAGAGACTGGAGGTaGTCAGCCTTAGGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: GHPASGVEAMVQETALGKRRDWR*SALGKN
Trigger: GTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAACCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: GHPASGVEAMVQETALGKPLVSP*WAQVWE
Trigger: TTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGG...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTCTTGTGAGTCCTTGGTaGGCTCAGGTTTGGGAATTC +
Preference number: 2 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSLVSPW*AQVWEF
Trigger: GAATTCCCAAACCTGAGCCCACCAAGGACTCACAAG...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCCCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: RRDWRCSALGKNKLREPSPLVSP*WAQVWE
Trigger: TTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGG...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCAAATCAAGGAGAGACTaGAGGTGCTCAGCCTTAGGC +
Preference number: 2 (lower is better)
Translates to: MVASATKSSIQASEAQLSKSRRD*RCSALG
Trigger: GCCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTT...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAAAAATCAAGGAGAGACTaGAGGTGCTCAGCCTTAGGC +
Preference number: 2 (lower is better)
Translates to: GHPASGVEAMVQETALGKKSRRD*RCSALG
Trigger: GCCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTT...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAATTCCTGCCCACATCTaGGCTCCAGTCAGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRIPAHI*APVRCR
Trigger: CCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAAT...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGAGGGTCAGCACAGGTTaGGACCTTCTGGACCACTTG +
Preference number: 2 (lower is better)
Translates to: PQTSISFQGFARSSLGKERVSTG*DLLDHL
Trigger: CAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCT...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCCAAGCCCTTAAACACTaGGCTCCAAATCAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: MVASATKSSIQASEAQLSQALKH*APNQGE
Trigger: CTCTCCTTGATTTGGAGCTCAGTGTTTAAGGGCTTG...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR GCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGCCCCCTGGCCAGCCCTaGCATCAGTATGGGATTCTT +
Preference number: 2 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQPPGQP*HQYGIL
Trigger: AAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGG...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGTGGTGGGCTCAGGTTTaGGAATTCCTGCCCACATCT +
Preference number: 2 (lower is better)
Translates to: PLNTELQIKERLEVLSLRWWAQV*EFLPTS
Trigger: AGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCA...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTTTGCTAGGTCTAGTCTaGGTAAAGAGATGTTCCCCC +
Preference number: 2 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSLLGLV*VKRCSP
Trigger: GGGGGAACATCTCTTTACCCAGACTAGACCTAGCAA...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTTCCAAGAGACCGCATTaGGAAAATGCAAAGTCCTCC +
Preference number: 2 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSSKRPH*ENAKSS
Trigger: GGAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGA...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CAA 90 bp AACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTaGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTC +
Preference number: 2 (lower is better)
Translates to: NLGWVVAFLPPSVDG*EHSKELLFRCSRVF
Trigger: GAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGGACTCTCATAGCTCCTaGAGCAGAGCTGGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: PQTSISFQGFARSSLGKEDSHSS*SRAGKR
Trigger: CCTCTTTCCAGCTCTGCTTCAGGAGCTATGAGAGTC...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCGACTCTCATAGCTCCTaGAGCAGAGCTGGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELDSHSS*SRAGKR
Trigger: CCTCTTTCCAGCTCTGCTTCAGGAGCTATGAGAGTC...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAAGGGTCAGCACAGGTTaGGACCTTCTGGACCACTTG +
Preference number: 2 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRRVSTG*DLLDHL
Trigger: CAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCT...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR GCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGAGGAGAGACTGGAGGTaGTCAGCCTTAGGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: PQTSISFQGFARSSLGKERRDWR*SALGKN
Trigger: GTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCTGTTCCAGAGTGTTCTaGCCTCTCATTGGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELCSRVF*PLIGQA
Trigger: GGCCTGACCAATGAGAGGCCAGAACACTCTGGAACA...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR GCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCAGGAGAGACTGGAGGTaGTCAGCCTTAGGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLRRDWR*SALGKN
Trigger: GTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCCCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLPLVSP*WAQVWE
Trigger: TTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGG...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGTGGTGGGCTCAGGTTTaGGAATTCCTGCCCACATCT +
Preference number: 2 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLWWAQV*EFLPTS
Trigger: AGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCA...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGACAGGTTGAGACCTTCTaGACCACTTGTGAGTCCTTG +
Preference number: 2 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRQVETF*TTCESL
Trigger: CAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTG...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTAAATCAAGGAGAGACTaGAGGTGCTCAGCCTTAGGC +
Preference number: 2 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSKSRRD*RCSALG
Trigger: GCCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTT...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR TCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGCAAGCCCTTAAACACTaGGCTCCAAATCAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQQALKH*APNQGE
Trigger: CTCTCCTTGATTTGGAGCTCAGTGTTTAAGGGCTTG...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGCAGGTTGAGACCTTCTaGACCACTTGTGAGTCCTTG +
Preference number: 2 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLQVETF*TTCESL
Trigger: CAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTG...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGTCCAAGAGACCGCATTaGGAAAATGCAAAGTCCTCC +
Preference number: 2 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQSKRPH*ENAKSS
Trigger: GGAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGA...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 72 bp CCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTaGTCAGGCCAGGCCAGGCCACCCAGCTTCAGGAGT +
Preference number: 3 (lower is better)
Translates to: PLPMFQSVLASH*SGQARPPSFRS
Trigger: ACTCCTGAAGCTGGGTGGCCTGGCCTGGCCTGACCAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCTTGGTGGGCTCAGGTTaGGGAATTCCTGCCCACATC +
Preference number: 3 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPLVGSG*GIPAHI
Trigger: GATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAA...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCCAGGGTCAGCACAGGTaGAGACCTTCTGGACCACTT +
Preference number: 3 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPQGQHR*RPSGPL
Trigger: AAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCTG...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATACAGGGTCAGCACAGGTaGAGACCTTCTGGACCACTT +
Preference number: 3 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPIQGQHR*RPSGPL
Trigger: AAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCTG...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACCAGGGTCAGCACAGGTaGAGACCTTCTGGACCACTT +
Preference number: 3 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHQGQHR*RPSGPL
Trigger: AAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCTG...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR GCA 72 bp CCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATaGTCCAGCCCCATTGCCATGGGGACTGTCCTAGCT +
Preference number: 3 (lower is better)
Translates to: PCHQYGILPDEG*SSPIAMGTVLA
Trigger: AGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR GCA 72 bp ACCCACAGATACTACCCTCTTCCCCCTGGCCAGCCCTaGCATCAGTATGGGATTCTTCCAGATGAGGGATGC +
Preference number: 3 (lower is better)
Translates to: THRYYPLPPGQP*HQYGILPDEGC
Trigger: GCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAAGAGGGTAGTATCTGTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 72 bp AAAGGCCAGGACCCACAGATACTACCCTCTTCCCCCTaGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGA +
Preference number: 3 (lower is better)
Translates to: KGQDPQILPSSP*PALPSVWDSSR
Trigger: TCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAAGAGGGTAGTATCTGTGGGTCCTGGCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCTATCCTTCCAGGGTTTaGCTAGGTCTAGTCTGGGTA +
Preference number: 3 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPYPSRV*LGLVWV
Trigger: TACCCAGACTAGACCTAGCAAAACCCTGGAAGGATA...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACGTCCAAGAGACCGCATaGGGAAAATGCAAAGTCCTC +
Preference number: 3 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHVQETA*GKCKVL
Trigger: GAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGAC...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR TCA 72 bp ATGCCAGGGACCTATACATCAGTCAGCCACACGGGCTaGTATGCACGCACACATGAAGAAAGGCCAGGACCC +
Preference number: 3 (lower is better)
Translates to: MPGTYTSVSHTG*YARTHEERPGP
Trigger: GGGTCCTGGCCTTTCTTCATGTGTGCGTGCATATCAGCCCGTGTGGCTGACTGATGTATAGGTCCCTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR TCA 72 bp AGTGACTTCTCTTACCTCTCACCAGGAAGATCCCAGTaGCTCAAACCCCAACAGGCCCCTCCTGGCTACGTG +
Preference number: 3 (lower is better)
Translates to: SDFSYLSPGRSQ*LKPQQAPPGYV
Trigger: CACGTAGCCAGGAGGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 72 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTaGACATGCGGACATCACAGACACTGTAGTCAGCAA +
Preference number: 3 (lower is better)
Translates to: VPEESLGNPKQA*TCGHHRHCSQQ
Trigger: TTGCTGACTACAGTGTCTGTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACTATCCTTCCAGGGTTTaGCTAGGTCTAGTCTGGGTA +
Preference number: 3 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHYPSRV*LGLVWV
Trigger: TACCCAGACTAGACCTAGCAAAACCCTGGAAGGATA...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTATCCTTCCAGGGTTTaGCTAGGTCTAGTCTGGGTA +
Preference number: 3 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSYPSRV*LGLVWV
Trigger: TACCCAGACTAGACCTAGCAAAACCCTGGAAGGATA...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 72 bp AGGTTGAGACCTTCTGGACCACTTGTGAGTCCTTGGTaGGCTCAGGTTTGGGAATTCCTGCCCACATCTGAG +
Preference number: 3 (lower is better)
Translates to: RLRPSGPLVSPW*AQVWEFLPTSE
Trigger: CTCAGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CCA 72 bp CACAGGTTGAGACCTTCTGGACCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAATTCCTGCCCACATCT +
Preference number: 3 (lower is better)
Translates to: HRLRPSGPLVSP*WAQVWEFLPTS
Trigger: AGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCTTGGTGGGCTCAGGTTaGGGAATTCCTGCCCACATC +
Preference number: 3 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELLVGSG*GIPAHI
Trigger: GATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAA...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGTTGGTGGGCTCAGGTTaGGGAATTCCTGCCCACATC +
Preference number: 3 (lower is better)
Translates to: PQTSISFQGFARSSLGKELVGSG*GIPAHI
Trigger: GATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAA...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGACCACTTGTGAGTCCTaGGTGGGCTCAGGTTTGGGA +
Preference number: 3 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQTTCES*VGSGLG
Trigger: TCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGT...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR-3UTR CAA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTACCACTTGTGAGTCCTaGGTGGGCTCAGGTTTGGGA +
Preference number: 3 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSTTCES*VGSGLG
Trigger: TCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGT...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR GCA 72 bp AGACACTGTAGTCAGCAACACAGATATGAACCAGGATaGCAGGGACCTATACATCAGTCAGCCACACGGGCT +
Preference number: 3 (lower is better)
Translates to: RHCSQQHRYEPG*QGPIHQSATRA
Trigger: AGCCCGTGTGGCTGACTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCCGGCCCGGGCGGAGGTaGGAGGCTGGAGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPRPGRR*EAGGES
Trigger: AGACTCGCCTCCAGCCTCCCACCTCCGCCCGGGCCG...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGCGGCCCGGGCGGAGGTaGGAGGCTGGAGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGRPGRR*EAGGES
Trigger: AGACTCGCCTCCAGCCTCCCACCTCCGCCCGGGCCG...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACTGTCGCCGCAGCCGCTaGGGTCCTCTCCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHCRRSR*GPLRPQ
Trigger: CTGGGGGCGGAGAGGACCTCAGCGGCTGCGGCGACA...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTGGGAGCGACGATGCGTaGTCAGCCCGGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVGSDDA*SARAGS
Trigger: ACTCCCAGCCCGGGCTGAGCACGCATCGTCGCTCCC...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACGGTGCAGGGGTCCCCTaGGAGGCCTCCAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHGAGVP*EASSSR
Trigger: GCGGGAACTGGAGGCCTCTCAGGGGACCCCTGCACC...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGGGGAGCGACGATGCGTaGTCAGCCCGGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWGSDDA*SARAGS
Trigger: ACTCCCAGCCCGGGCTGAGCACGCATCGTCGCTCCC...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACCCCCGGGCAGATCGCTaGCGCCGTGGACGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHPRADR*RRGRVQ
Trigger: CTGGACTCGTCCACGGCGGCAGCGATCTGCCCGGGG...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTCCCCGGGCAGATCGCTaGCGCCGTGGACGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSPRADR*RRGRVQ
Trigger: CTGGACTCGTCCACGGCGGCAGCGATCTGCCCGGGG...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCGCGGAGGTGGGAGGCTaGAGGCGAGTCTCGGACGCG +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSAEVGG*RRVSDA
Trigger: CGCGTCCGAGACTCGCCTCCAGCCTCCCACCTCCGC...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGTCGCCGCAGCCGCTaGGGTCCTCTCCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKCRRSR*GPLRPQ
Trigger: CTGGGGGCGGAGAGGACCTCAGCGGCTGCGGCGACA...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTTGTCGCCGCAGCCGCTaGGGTCCTCTCCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSCRRSR*GPLRPQ
Trigger: CTGGGGGCGGAGAGGACCTCAGCGGCTGCGGCGACA...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAGATGGAGGCCGAACTaGCGGGAGCGGATGGCGGAG +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGRWRPN*RERMAE
Trigger: CTCCGCCATCCGCTCCCGTCAGTTCGGCCTCCATCT...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGGCACAGGGCCGACTCTaGAGGGATGGCCTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWAQGRL*RDGLRD
Trigger: GTCTCGGAGGCCATCCCTTCAGAGTCGGCCCTGTGC...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCGCACAGGGCCGACTCTaGAGGGATGGCCTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPAQGRL*RDGLRD
Trigger: GTCTCGGAGGCCATCCCTTCAGAGTCGGCCCTGTGC...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTGCACCAGGCGGGGGCTaGCATCTACATCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVAPGGG*HLHLRG
Trigger: TCCACGCAGATGTAGATGTCAGCCCCCGCCTGGTGC...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGCGGCGAGCAGAGAAGTaGACCAGGCGGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGRRAEK*TRRGLT
Trigger: TGTCAGCCCCCGCCTGGTGCACTTCTCTGCTCGCCG...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTCCAGTCCACAGCGGCTaGAGCCCCAGTCTCCCATAC +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVPVHSG*SPSLPY
Trigger: GTATGGGAGACTGGGGCTGCAGCCGCTGTGGACTGG...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTCCAGGAAGCTTGGGGTaGCCACCACCTCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSPGSLG*PPPPAA
Trigger: AGCGGCGGGAGGTGGTGGGCACCCCAAGCTTCCTGG...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTGCCGCCGCTCAGGTGTaGCCGATCTCACGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVAAAQV*PISRLQ
Trigger: TTGCAGACGTGAGATCGGGCACACCTGAGCGGCGGC...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR CCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACGTGCTCAGCCCGGGCTaGGAGTGTCCGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHVLSPG*ECPRAL
Trigger: CAGAGCCCTCGGACACTCCCAGCCCGGGCTGAGCAC...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCAGATCGCTGCCGCCGTaGACGAGTCCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPRSLPP*TSPARA
Trigger: AGCCCTGGCTGGACTCGTCCACGGCGGCAGCGATCT...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGCCGACTCTGAAGGGATaGCCTCCGAGACCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGPTLKG*PPRPRA
Trigger: TGCCCGGGGTCTCGGAGGCCATCCCTTCAGAGTCGG...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCCCGACTCTGAAGGGATaGCCTCCGAGACCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPPTLKG*PPRPRA
Trigger: TGCCCGGGGTCTCGGAGGCCATCCCTTCAGAGTCGG...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGCCGACTCTGAAGGGATaGCCTCCGAGACCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWPTLKG*PPRPRA
Trigger: TGCCCGGGGTCTCGGAGGCCATCCCTTCAGAGTCGG...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACAGATGGAGGCCGAACTaGCGGGAGCGGATGGCGGAG +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHRWRPN*RERMAE
Trigger: CTCCGCCATCCGCTCCCGTCAGTTCGGCCTCCATCT...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTTGCCATCCCGGTCGATaGAGTAGTGGCCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVCHPGR*SSGRLL
Trigger: AAGGAGGCGGCCACTACTTCATCGACCGGGATGGCA...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTGGGAGCGACGATGCGTaGTCAGCCCGGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: FPLASPAISMGFFQMRDAGSDDA*SARAGS
Trigger: ACTCCCAGCCCGGGCTGAGCACGCATCGTCGCTCCC...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTCCCCGGGCAGATCGCTaGCGCCGTGGACGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSPRADR*RRGRVQ
Trigger: CTGGACTCGTCCACGGCGGCAGCGATCTGCCCGGGG...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCCGGCGAGCAGAGAAGTaGACCAGGCGGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSRRAEK*TRRGLT
Trigger: TGTCAGCCCCCGCCTGGTGCACTTCTCTGCTCGCCG...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCCCAGTCCACAGCGGCTaGAGCCCCAGTCTCCCATAC +
Preference number: 4 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPPVHSG*SPSLPY
Trigger: GTATGGGAGACTGGGGCTGCAGCCGCTGTGGACTGG...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGGAAGCTTGGGGTaGCCACCACCTCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: FPLASPAISMGFFQMRDAPGSLG*PPPPAA
Trigger: AGCGGCGGGAGGTGGTGGGCACCCCAAGCTTCCTGG...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCTCTAGTCGGAAGCCGTaGTCGAGAGCCACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPSSRKP*SRATRS
Trigger: GCTGCGGGTGGCTCTCGAGCACGGCTTCCGACTAGA...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTGCCCGATCTCACGTCTaGAAGTCGGCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSARSHV*KSAGLE
Trigger: CTCCAGCCCCGCCGACTTGCAGACGTGAGATCGGGC...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR CCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCACTGACGGGAGCGGATaGCGGAGCCCCCTTGTATCC +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPTDGSG*RSPLVS
Trigger: GGATACAAGGGGGCTCCGCCATCCGCTCCCGTCAGT...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGCTGCCCTATCCCCACTaGCCACACCAAATCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWLPYPH*PHQIGP
Trigger: GGGCCCGATTTGGTGTGGCCAGTGGGGATAGGGCAG...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACCTCCTCCAGGAAGCTTaGGGTGCCCACCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHLLQEA*GAHHLP
Trigger: CGGGAGGTGGTGGGCACCCCAAGCTTCCTGGAGGAG...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCAGAGACTGGGCGGACTaGCTGGACTGGCAGACGCTG +
Preference number: 4 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPRDWAD*LDWQTL
Trigger: CAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCT...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR CCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCGCGGAGGTGGGAGGCTaGAGGCGAGTCTCGGACGCG +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSAEVGG*RRVSDA
Trigger: CGCGTCCGAGACTCGCCTCCAGCCTCCCACCTCCGC...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCCGGCCCGGGCGGAGGTaGGAGGCTGGAGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSRPGRR*EAGGES
Trigger: AGACTCGCCTCCAGCCTCCCACCTCCGCCCGGGCCG...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCTCCGCCCCCAGGAAGTaGCCTAAGGGCAGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSSAPRK*PKGSGP
Trigger: CGGGCCGCTGCCCTTAGGCCACTTCCTGGGGGCGGA...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCAATCCAACCAGCAGGTaGCGGTGGCGAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSNPTSR*RWRAQG
Trigger: GCCCTGTGCTCGCCACCGTCACCTGCTGGTTGGATT...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCTGCCATCCCGGTCGATaGAGTAGTGGCCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPCHPGR*SSGRLL
Trigger: AAGGAGGCGGCCACTACTTCATCGACCGGGATGGCA...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTGCACCAGGCGGGGGCTaGCATCTACATCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSAPGGG*HLHLRG
Trigger: TCCACGCAGATGTAGATGTCAGCCCCCGCCTGGTGC...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACGCACCAGGCGGGGGCTaGCATCTACATCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHAPGGG*HLHLRG
Trigger: TCCACGCAGATGTAGATGTCAGCCCCCGCCTGGTGC...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCGGGGCCCACTCCAGATaGAAATGTGGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPGAHSR*KCGLPS
Trigger: AGAGGGGAGCCCACATTTTCATCTGGAGTGGGCCCC...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGGCTGGCGGGACGGGGTaGCTCAGGCACGTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: PQTSISFQGFARSSLGKEAGGTG*LRHVAP
Trigger: CGGGGCGACGTGCCTGAGTCACCCCGTCCCGCCAGC...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR GCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTCCAGTCCACAGCGGCTaGAGCCCCAGTCTCCCATAC +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSPVHSG*SPSLPY
Trigger: GTATGGGAGACTGGGGCTGCAGCCGCTGTGGACTGG...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATATCTAGTCGGAAGCCGTaGTCGAGAGCCACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPISSRKP*SRATRS
Trigger: GCTGCGGGTGGCTCTCGAGCACGGCTTCCGACTAGA...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAAGTGCTCAGCCCGGGCTaGGAGTGTCCGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKVLSPG*ECPRAL
Trigger: CAGAGCCCTCGGACACTCCCAGCCCGGGCTGAGCAC...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGCCCCAGCATAGAGTCTaGGAAGCGGGTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWPQHRV*EAGQGL
Trigger: GAGACCCTGACCCGCTTCCCAGACTCTATGCTGGGG...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGTCCGCCCCCAGGAAGTaGCCTAAGGGCAGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMSAPRK*PKGSGP
Trigger: CGGGCCGCTGCCCTTAGGCCACTTCCTGGGGGCGGA...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGGAGGGGAAGGGAGCTTaGGGTCTGGACGTATCCGAT +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWEGKGA*GLDVSD
Trigger: ATCGGATACGTCCAGACCTCAAGCTCCCTTCCCCTC...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGCCAGCCTCAGGAAATTaGGGATGTGCCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWPASGN*GCAGRP
Trigger: AGGCCTTCCGGCACATCCTCAATTTCCTGAGGCTGG...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTGGGGCCCACTCCAGATaGAAATGTGGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSGAHSR*KCGLPS
Trigger: AGAGGGGAGCCCACATTTTCATCTGGAGTGGGCCCC...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACGGGGCCCACTCCAGATaGAAATGTGGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHGAHSR*KCGLPS
Trigger: AGAGGGGAGCCCACATTTTCATCTGGAGTGGGCCCC...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCATTCCTGCCCACATCTaGGCTCCAGTCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPIPAHI*APVRCR
Trigger: CCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAAT...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGCCAGGAAGATCCCAGTaGCTCAAACCCCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWPGRSQ*LKPQQA
Trigger: GGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGG...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCCCAGGAAGATCCCAGTaGCTCAAACCCCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPPGRSQ*LKPQQA
Trigger: GGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGG...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTGCTGGCGGGACGGGGTaGCTCAGGCACGTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSAGGTG*LRHVAP
Trigger: CGGGGCGACGTGCCTGAGTCACCCCGTCCCGCCAGC...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR GCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCCAGGAAGCTTGGGGTaGCCACCACCTCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMPGSLG*PPPPAA
Trigger: AGCGGCGGGAGGTGGTGGGCACCCCAAGCTTCCTGG...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTGAACAGCATCCTCAGTaGCGGACAAAGCGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVEQHPQ*RTKRRD
Trigger: GTCTCTGCGCTTTGTCCGGCACTGAGGATGCTGTTC...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGATGCTCCAGCCCCATTaGCATGGGGACTGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWMLQPH*HGDCPS
Trigger: GCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCAT...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCAGATCGCTGCCGCCGTaGACGAGTCCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPRSLPP*TSPARA
Trigger: AGCCCTGGCTGGACTCGTCCACGGCGGCAGCGATCT...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTCCGACTCTGAAGGGATaGCCTCCGAGACCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSPTLKG*PPRPRA
Trigger: TGCCCGGGGTCTCGGAGGCCATCCCTTCAGAGTCGG...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGTGGACGTATCCGATTTaGGGTGGTCAGCGACACCCC +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWWTYPI*GGQRHP
Trigger: GGGGTGTCGCTGACCACCCCAAATCGGATACGTCCA...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCCGGCTACTTTGGTGGTaGATGGGGAGGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPRLLWW*MGRWCQ
Trigger: CTGACACCACCTCCCCATCCACCACCAAAGTAGCCG...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTCACCCCGGCTACTTTaGTGGTGGATGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSSPRLL*WWMGRW
Trigger: CCACCTCCCCATCCACCACCAAAGTAGCCGGGGTGA...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCCTCCTCCAGGAAGCTTaGGGTGCCCACCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSLLQEA*GAHHLP
Trigger: CGGGAGGTGGTGGGCACCCCAAGCTTCCTGGAGGAG...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCCTCCTCCAGGAAGCTTaGGGTGCCCACCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPLLQEA*GAHHLP
Trigger: CGGGAGGTGGTGGGCACCCCAAGCTTCCTGGAGGAG...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCTGCCCTGGGCGGCCTTaGGCCTTCCCCAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSCPGRP*AFPSYL
Trigger: GAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGGCA...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCTGTCGCCGCAGCCGCTaGGGTCCTCTCCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLCRRSR*GPLRPQ
Trigger: CTGGGGGCGGAGAGGACCTCAGCGGCTGCGGCGACA...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCAGTGTCCGAGGGCTCTaGTGGAAACAGCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPSVRGL*WKQPGV
Trigger: AACTCCTGGCTGTTTCCATCAGAGCCCTCGGACACT...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGGCACAGGGCCGACTCTaGAGGGATGGCCTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMAQGRL*RDGLRD
Trigger: GTCTCGGAGGCCATCCCTTCAGAGTCGGCCCTGTGC...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAAAATCCAACCAGCAGGTaGCGGTGGCGAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKNPTSR*RWRAQG
Trigger: GCCCTGTGCTCGCCACCGTCACCTGCTGGTTGGATT...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTTGCCATCCCGGTCGATaGAGTAGTGGCCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FPLASPAISMGFFQMRDACHPGR*SSGRLL
Trigger: AAGGAGGCGGCCACTACTTCATCGACCGGGATGGCA...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTCCAGCCTCAGGAAATTaGGGATGTGCCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSPASGN*GCAGRP
Trigger: AGGCCTTCCGGCACATCCTCAATTTCCTGAGGCTGG...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACATTCCTGCCCACATCTaGGCTCCAGTCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHIPAHI*APVRCR
Trigger: CCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAAT...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGAGGGTCAGCACAGGTTaGGACCTTCTGGACCACTTG +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWRVSTG*DLLDHL
Trigger: CAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCT...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGTGGGATTCTTCCAGATaGGGGATGCTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWWDSSR*GMLQPH
Trigger: ATGGGGCTGGAGCATCCCTCATCTGGAAGAATCCCA...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTTCAGCAACACAGATATaGACCAGGATGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVSATQI*TRMPGT
Trigger: GGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGA...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCGCCGGGGAGCGACGATaGGTGCTCAGCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLAGERR*VLSPGW
Trigger: CCAGCCCGGGCTGAGCACGCATCGTCGCTCCCCGGC...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGCCCCGGGCAGATCGCTaGCGCCGTGGACGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PQTSISFQGFARSSLGKEPRADR*RRGRVQ
Trigger: CTGGACTCGTCCACGGCGGCAGCGATCTGCCCGGGG...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTGTAGAAGTCAGCCTCTaGCCTGAGCAGCGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSVEVSL*PEQRCL
Trigger: GAGACAGCGCTGCTCAGGGCAGAGGCTGACTTCTAC...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCGTAGAAGTCAGCCTCTaGCCTGAGCAGCGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSVEVSL*PEQRCL
Trigger: GAGACAGCGCTGCTCAGGGCAGAGGCTGACTTCTAC...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATAGTAGAAGTCAGCCTCTaGCCTGAGCAGCGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPIVEVSL*PEQRCL
Trigger: GAGACAGCGCTGCTCAGGGCAGAGGCTGACTTCTAC...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTGACACTCAGAGTCGGTaGAGAAAAGGTTGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVDTQSR*RKGWLG
Trigger: TCCGAGCCAACCTTTTCTGCACCGACTCTGAGTGTC...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATCTAGTCGGAAGCCGTaGTCGAGAGCCACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKSSRKP*SRATRS
Trigger: GCTGCGGGTGGCTCTCGAGCACGGCTTCCGACTAGA...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGGAACAGCATCCTCAGTaGCGGACAAAGCGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWEQHPQ*RTKRRD
Trigger: GTCTCTGCGCTTTGTCCGGCACTGAGGATGCTGTTC...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCCCCCCTGGCCAGCCCTaGCATCAGTATGGGATTCTT +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSPPGQP*HQYGIL
Trigger: AAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGG...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTCCCCCTGGCCAGCCCTaGCATCAGTATGGGATTCTT +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSPPGQP*HQYGIL
Trigger: AAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGG...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGCCAGTGAAGAAGCTGTaGGTGAGTATCCCACCCGCT +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGPVKKL*VSIPPA
Trigger: AGCGGGTGGGATACTCACGCACAGCTTCTTCACTGG...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCGCCCGATCTCACGTCTaGAAGTCGGCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSARSHV*KSAGLE
Trigger: CTCCAGCCCCGCCGACTTGCAGACGTGAGATCGGGC...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGGTGCTCAGCCCGGGCTaGGAGTGTCCGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRVLSPG*ECPRAL
Trigger: CAGAGCCCTCGGACACTCCCAGCCCGGGCTGAGCAC...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCTCAGATTCGCTGGGTTaGAGGCACAGGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPSDSLG*RHRWST
Trigger: TGTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGA...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGTCAGATTCGCTGGGTTaGAGGCACAGGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGSDSLG*RHRWST
Trigger: TGTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGA...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCAGCTGTCAGATTCGCTaGGTTGGAGGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPSCQIR*VGGTGG
Trigger: TCCACCTGTGCCTCCAACCCAGCGAATCTGACAGCT...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCACATCTACATCTGCGTaGAGCAGGGCAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPTSTSA*SRAAVG
Trigger: ACCCACAGCTGCCCTGCTCCACGCAGATGTAGATGT...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTCTGCCCTATCCCCACTaGCCACACCAAATCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSLPYPH*PHQIGP
Trigger: GGGCCCGATTTGGTGTGGCCAGTGGGGATAGGGCAG...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTGTATCCCACCCGCTCTaGGACCCAGAAATCCCATCC +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSVSHPL*DPEIPS
Trigger: GGATGGGATTTCTGGGTCCCAGAGCGGGTGGGATAC...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGTGGACTGGCAGACGCTaGCGGGACGGGGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMWTGRR*RDGVTQ
Trigger: CTGAGTCACCCCGTCCCGCCAGCGTCTGCCAGTCCA...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR TCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGAGATGGAGGCCGAACTaGCGGGAGCGGATGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRRWRPN*RERMAE
Trigger: CTCCGCCATCCGCTCCCGTCAGTTCGGCCTCCATCT...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGAATCCAACCAGCAGGTaGCGGTGGCGAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMNPTSR*RWRAQG
Trigger: GCCCTGTGCTCGCCACCGTCACCTGCTGGTTGGATT...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGGGTGCAGGGGTCCCCTaGGAGGCCTCCAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQGAGVP*EASSSR
Trigger: GCGGGAACTGGAGGCCTCTCAGGGGACCCCTGCACC...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTGGTGCAGGGGTCCCCTaGGAGGCCTCCAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSGAGVP*EASSSR
Trigger: GCGGGAACTGGAGGCCTCTCAGGGGACCCCTGCACC...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCGCAGAGACCTGGAGTTaGGCAGGTCTTCGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSAETWS*AGLRGR
Trigger: CCGACCCCGAAGACCTGCTCAACTCCAGGTCTCTGC...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCGACTCTCATAGCTCCTaGAGCAGAGCTGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPDSHSS*SRAGKR
Trigger: CCTCTTTCCAGCTCTGCTTCAGGAGCTATGAGAGTC...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCGTCAGCCACACGGGCTaGTATGCACGCACACATGAA +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSVSHTG*YARTHE
Trigger: TTCATGTGTGCGTGCATATCAGCCCGTGTGGCTGAC...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGTCAGCAACACAGATATaGACCAGGATGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGSATQI*TRMPGT
Trigger: GGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGA...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGGGGAGCGACGATGCGTaGTCAGCCCGGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PQTSISFQGFARSSLGKEGSDDA*SARAGS
Trigger: ACTCCCAGCCCGGGCTGAGCACGCATCGTCGCTCCC...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAGGAAATTGAGGATGTaGCGGAAGGCCTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGRKLRM*RKALPS
Trigger: GGATGGCAAGGCCTTCCGGCACATCCTCAATTTCCT...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCCCAGTCCACAGCGGCTaGAGCCCCAGTCTCCCATAC +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSPVHSG*SPSLPY
Trigger: GTATGGGAGACTGGGGCTGCAGCCGCTGTGGACTGG...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCGAACAGCATCCTCAGTaGCGGACAAAGCGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSEQHPQ*RTKRRD
Trigger: GTCTCTGCGCTTTGTCCGGCACTGAGGATGCTGTTC...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATAGAACAGCATCCTCAGTaGCGGACAAAGCGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPIEQHPQ*RTKRRD
Trigger: GTCTCTGCGCTTTGTCCGGCACTGAGGATGCTGTTC...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAGGAGAGACTGGAGGTaGTCAGCCTTAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGRRDWR*SALGKN
Trigger: GTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACCTTCCAGATGAGGGATaGTCCAGCCCCATTGCCATG +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHLPDEG*SSPIAM
Trigger: CATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGAGATCGCTGCCGCCGTaGACGAGTCCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRRSLPP*TSPARA
Trigger: AGCCCTGGCTGGACTCGTCCACGGCGGCAGCGATCT...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAGCGACACCCCTCTGTaGTCTTCAGACAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGSDTPL*SSDSGF
Trigger: AAACCCACTGTCTGAAGACCACAGAGGGGTGTCGCT...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTACACCCAGTAAGGTTTaGGGCTCACCCCGGCTACTT +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSTPSKV*GSPRLL
Trigger: AAGTAGCCGGGGTGAGCCCCAAACCTTACTGGGTGT...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCGGTTGGAGGCACAGGTaGAGCACACCCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSGWRHR*STPSKV
Trigger: AACCTTACTGGGTGTGCTCCACCTGTGCCTCCAACC...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTAGCTGTCAGATTCGCTaGGTTGGAGGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSSCQIR*VGGTGG
Trigger: TCCACCTGTGCCTCCAACCCAGCGAATCTGACAGCT...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTTCAGGGTCTCCAAAGTaGTGGAATATAGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVSGSPK*WNIVCP
Trigger: GGGGCACACTATATTCCACCACTTTGGAGACCCTGA...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCCCCCAGCATAGAGTCTaGGAAGCGGGTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPPQHRV*EAGQGL
Trigger: GAGACCCTGACCCGCTTCCCAGACTCTATGCTGGGG...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCACATCTACATCTGCGTaGAGCAGGGCAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSTSTSA*SRAAVG
Trigger: ACCCACAGCTGCCCTGCTCCACGCAGATGTAGATGT...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTCGGTGCAGAAAAGGTTaGCTCGGAAGGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSRCRKG*LGRCPP
Trigger: AGGTGGACACCTTCCGAGCCAACCTTTTCTGCACCG...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGCTCCAGATGAAAATGTaGGCTCCCCTCTGCCCTATC +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWLQMKM*APLCPI
Trigger: GATAGGGCAGAGGGGAGCCCACATTTTCATCTGGAG...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTAAATCAAGGAGAGACTaGAGGTGCTCAGCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVKSRRD*RCSALG
Trigger: GCCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTT...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCAACCCCAAACAGGCCTaGACATGCGGACATCACAGA +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPNPKQA*TCGHHR
Trigger: TCTGTGATGTCCGCATGTCCAGGCCTGTTTGGGGTT...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAACCCCAAACAGGCCTaGACATGCGGACATCACAGA +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGNPKQA*TCGHHR
Trigger: TCTGTGATGTCCGCATGTCCAGGCCTGTTTGGGGTT...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTCCAACAGGCCCCTCCTaGCTACGTGGTGATGCATAT +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSPTGPS*LRGDAY
Trigger: ATATGCATCACCACGTAGCCAGGAGGGGCCTGTTGG...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGTGCCCTGGGCGGCCTTaGGCCTTCCCCAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRCPGRP*AFPSYL
Trigger: GAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGGCA...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGCGGAGGTGGGAGGCTaGAGGCGAGTCTCGGACGCG +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRAEVGG*RRVSDA
Trigger: CGCGTCCGAGACTCGCCTCCAGCCTCCCACCTCCGC...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CAA 72 bp GAGAACCTTCCCTACCCCTCCCAGGGTCAGCACAGGTaGAGACCTTCTGGACCACTTGTGAGTCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ENLPYPSQGQHR*RPSGPLVSPWW
Trigger: CCACCAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCTGGGAGGGGTAGGGAAGGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCGAGGGGAAGGGAGCTTaGGGTCTGGACGTATCCGAT +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSEGKGA*GLDVSD
Trigger: ATCGGATACGTCCAGACCTCAAGCTCCCTTCCCCTC...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTTCCCCACAGTCAAACTaGGAACAGCATCCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSSPQSN*EQHPQC
Trigger: GCACTGAGGATGCTGTTCTCAGTTTGACTGTGGGGA...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCATTCCTGCCCACATCTaGGCTCCAGTCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPIPAHI*APVRCR
Trigger: CCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAAT...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTCAGCAACACAGATATaGACCAGGATGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSSATQI*TRMPGT
Trigger: GGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGA...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAACTTCCTGGGTGTGTaGAGAATTGGGTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGNFLGV*RIGSKL
Trigger: CAGCTTCGACCCAATTCTGCACACACCCAGGAAGTT...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCTGGTGGAATATAGTGTaGCCCCCACATTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPWWNIV*PPHSGS
Trigger: TGACCCTGAATGTGGGGGGCACACTATATTCCACCA...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCAGGAAATTGAGGATGTaGCGGAAGGCCTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSRKLRM*RKALPS
Trigger: GGATGGCAAGGCCTTCCGGCACATCCTCAATTTCCT...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTCCAGGAAGCTTGGGGTaGCCACCACCTCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSPGSLG*PPPPAA
Trigger: AGCGGCGGGAGGTGGTGGGCACCCCAAGCTTCCTGG...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTATGCTCCAGCCCCATTaGCATGGGGACTGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSMLQPH*HGDCPS
Trigger: GCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCAT...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCTTCCAGATGAGGGATaGTCCAGCCCCATTGCCATG +
Preference number: 4 (lower is better)
Translates to: FPLASPAISMGFFQMRDALPDEG*SSPIAM
Trigger: CATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGTGAAGAAGCTGTaGGTGAGTATCCCACCCGCT +
Preference number: 4 (lower is better)
Translates to: FPLASPAISMGFFQMRDAPVKKL*VSIPPA
Trigger: AGCGGGTGGGATACTCACGCACAGCTTCTTCACTGG...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGACTGACGGGAGCGGATaGCGGAGCCCCCTTGTATCC +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRTDGSG*RSPLVS
Trigger: GGATACAAGGGGGCTCCGCCATCCGCTCCCGTCAGT...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGGTGGTCTTCAGACAGTaGGTTTCCGGAATCCAACCA +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGVVFRQ*VSGIQP
Trigger: TGGTTGGATTCCGGAAACCCACTGTCTGAAGACCAC...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTAGCGACACCCCTCTGTaGTCTTCAGACAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSSDTPL*SSDSGF
Trigger: AAACCCACTGTCTGAAGACCACAGAGGGGTGTCGCT...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGGACGTATCCGATTTaGGGTGGTCAGCGACACCCC +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKWTYPI*GGQRHP
Trigger: GGGGTGTCGCTGACCACCCCAAATCGGATACGTCCA...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACAGGGAGCTTGAGGTCTaGACGTATCCGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHRELEV*TYPIWG
Trigger: ACCCCAAATCGGATACGTCCAGACCTCAAGCTCCCT...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCCGGCTACTTTGGTGGTaGATGGGGAGGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPRLLWW*MGRWCQ
Trigger: CTGACACCACCTCCCCATCCACCACCAAAGTAGCCG...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCTCACCCCGGCTACTTTaGTGGTGGATGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSSPRLL*WWMGRW
Trigger: CCACCTCCCCATCCACCACCAAAGTAGCCGGGGTGA...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGTCACCCCGGCTACTTTaGTGGTGGATGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMSPRLL*WWMGRW
Trigger: CCACCTCCCCATCCACCACCAAAGTAGCCGGGGTGA...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGGGGTGTGTGCAGAATTaGGTCGAAGCTGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGGCVQN*VEAVRF
Trigger: GAATCTGACAGCTTCGACCCAATTCTGCACACACCC...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGTCAGGGTCTCCAAAGTaGTGGAATATAGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGSGSPK*WNIVCP
Trigger: GGGGCACACTATATTCCACCACTTTGGAGACCCTGA...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCTCAGGGTCTCCAAAGTaGTGGAATATAGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPSGSPK*WNIVCP
Trigger: GGGGCACACTATATTCCACCACTTTGGAGACCCTGA...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCCCCAGCATAGAGTCTaGGAAGCGGGTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMPQHRV*EAGQGL
Trigger: GAGACCCTGACCCGCTTCCCAGACTCTATGCTGGGG...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCCCCCAGCATAGAGTCTaGGAAGCGGGTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSPQHRV*EAGQGL
Trigger: GAGACCCTGACCCGCTTCCCAGACTCTATGCTGGGG...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCCTCCAGGAAGCTTaGGGTGCCCACCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELLLQEA*GAHHLP
Trigger: CGGGAGGTGGTGGGCACCCCAAGCTTCCTGGAGGAG...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATATGGTGGGCTCAGGTTTaGGAATTCCTGCCCACATCT +
Preference number: 4 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPIWWAQV*EFLPTS
Trigger: AGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCA...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGCTTGTGAGTCCTTGGTaGGCTCAGGTTTGGGAATTC +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGLVSPW*AQVWEF
Trigger: GAATTCCCAAACCTGAGCCCACCAAGGACTCACAAG...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGCTTGTGAGTCCTTGGTaGGCTCAGGTTTGGGAATTC +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWLVSPW*AQVWEF
Trigger: GAATTCCCAAACCTGAGCCCACCAAGGACTCACAAG...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACCCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHPLVSP*WAQVWE
Trigger: TTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGG...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATACCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPIPLVSP*WAQVWE
Trigger: TTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGG...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCCAGGTTGAGACCTTCTaGACCACTTGTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPQVETF*TTCESL
Trigger: CAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTG...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATATGTTCCAGAGTGTTCTaGCCTCTCATTGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPICSRVF*PLIGQA
Trigger: GGCCTGACCAATGAGAGGCCAGAACACTCTGGAACA...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGTACATCAACCTAGGGTaGGTTGTGGCCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGYINLG*VVAFLP
Trigger: AGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTA...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCGTATCCCACCCGCTCTaGGACCCAGAAATCCCATCC +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPVSHPL*DPEIPS
Trigger: GGATGGGATTTCTGGGTCCCAGAGCGGGTGGGATAC...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAAGATGGAGGCCGAACTaGCGGGAGCGGATGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRRWRPN*RERMAE
Trigger: CTCCGCCATCCGCTCCCGTCAGTTCGGCCTCCATCT...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCGCACAGGGCCGACTCTaGAGGGATGGCCTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLAQGRL*RDGLRD
Trigger: GTCTCGGAGGCCATCCCTTCAGAGTCGGCCCTGTGC...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCGCAGAGACCTGGAGTTaGGCAGGTCTTCGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELAETWS*AGLRGR
Trigger: CCGACCCCGAAGACCTGCTCAACTCCAGGTCTCTGC...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAAAGGGTCAGCACAGGTTaGGACCTTCTGGACCACTTG +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKRVSTG*DLLDHL
Trigger: CAAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCT...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGCAAGCCCTTAAACACTaGGCTCCAAATCAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGQALKH*APNQGE
Trigger: CTCTCCTTGATTTGGAGCTCAGTGTTTAAGGGCTTG...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTTGGGATTCTTCCAGATaGGGGATGCTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSWDSSR*GMLQPH
Trigger: ATGGGGCTGGAGCATCCCTCATCTGGAAGAATCCCA...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCCGGCGAGCAGAGAAGTaGACCAGGCGGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLRRAEK*TRRGLT
Trigger: TGTCAGCCCCCGCCTGGTGCACTTCTCTGCTCGCCG...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGCGGCGAGCAGAGAAGTaGACCAGGCGGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQRRAEK*TRRGLT
Trigger: TGTCAGCCCCCGCCTGGTGCACTTCTCTGCTCGCCG...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAACTTCCAGATGAGGGATaGTCCAGCCCCATTGCCATG +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKLPDEG*SSPIAM
Trigger: CATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCCCCCCTGGCCAGCCCTaGCATCAGTATGGGATTCTT +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSPPGQP*HQYGIL
Trigger: AAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGG...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTCAACAGGTCCATGGTTaGCTCAGCAACCAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSQQVHG*LSNQEF
Trigger: GAACTCTTGGTTGCTGAGGCAACCATGGACCTGTTG...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTAGATCGCTGCCGCCGTaGACGAGTCCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSRSLPP*TSPARA
Trigger: AGCCCTGGCTGGACTCGTCCACGGCGGCAGCGATCT...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCCGGCTACTTTGGTGGTaGATGGGGAGGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSRLLWW*MGRWCQ
Trigger: CTGACACCACCTCCCCATCCACCACCAAAGTAGCCG...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTACACCCAGTAAGGTTTaGGGCTCACCCCGGCTACTT +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSTPSKV*GSPRLL
Trigger: AAGTAGCCGGGGTGAGCCCCAAACCTTACTGGGTGT...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCGGTTGGAGGCACAGGTaGAGCACACCCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPGWRHR*STPSKV
Trigger: AACCTTACTGGGTGTGCTCCACCTGTGCCTCCAACC...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATCAGATTCGCTGGGTTaGAGGCACAGGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKSDSLG*RHRWST
Trigger: TGTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGA...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCAGCTGTCAGATTCGCTaGGTTGGAGGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPSCQIR*VGGTGG
Trigger: TCCACCTGTGCCTCCAACCCAGCGAATCTGACAGCT...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACGGGTGTGTGCAGAATTaGGTCGAAGCTGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHGCVQN*VEAVRF
Trigger: GAATCTGACAGCTTCGACCCAATTCTGCACACACCC...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAGGCAGAACTTCCTaGGTGTGTGCAGAATTGGGT +
Preference number: 4 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGKGRTS*VCAELG
Trigger: ACCCAATTCTGCACACACCCAGGAAGTTCTGCCTTT...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCACATCTACATCTGCGTaGAGCAGGGCAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPTSTSA*SRAAVG
Trigger: ACCCACAGCTGCCCTGCTCCACGCAGATGTAGATGT...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCCGGTGCAGAAAAGGTTaGCTCGGAAGGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSRCRKG*LGRCPP
Trigger: AGGTGGACACCTTCCGAGCCAACCTTTTCTGCACCG...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTCCAACAGGCCCCTCCTaGCTACGTGGTGATGCATAT +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSPTGPS*LRGDAY
Trigger: ATATGCATCACCACGTAGCCAGGAGGGGCCTGTTGG...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCCCAACAGGCCCCTCCTaGCTACGTGGTGATGCATAT +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPPTGPS*LRGDAY
Trigger: ATATGCATCACCACGTAGCCAGGAGGGGCCTGTTGG...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGATGCCCTGGGCGGCCTTaGGCCTTCCCCAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRCPGRP*AFPSYL
Trigger: GAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGGCA...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCTGCCCTGGGCGGCCTTaGGCCTTCCCCAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLCPGRP*AFPSYL
Trigger: GAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGGCA...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGGTATCCCACCCGCTCTaGGACCCAGAAATCCCATCC +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMVSHPL*DPEIPS
Trigger: GGATGGGATTTCTGGGTCCCAGAGCGGGTGGGATAC...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CAA 72 bp GCACAGGTTGAGACCTTCTGGACCACTTGTGAGTCCTaGGTGGGCTCAGGTTTGGGAATTCCTGCCCACATC +
Preference number: 4 (lower is better)
Translates to: AQVETFWTTCES*VGSGLGIPAHI
Trigger: GATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAAATCCAACCAGCAGGTaGCGGTGGCGAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRNPTSR*RWRAQG
Trigger: GCCCTGTGCTCGCCACCGTCACCTGCTGGTTGGATT...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGTGCCATCCCGGTCGATaGAGTAGTGGCCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PQTSISFQGFARSSLGKECHPGR*SSGRLL
Trigger: AAGGAGGCGGCCACTACTTCATCGACCGGGATGGCA...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGGCACCAGGCGGGGGCTaGCATCTACATCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQAPGGG*HLHLRG
Trigger: TCCACGCAGATGTAGATGTCAGCCCCCGCCTGGTGC...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAACTCCTGGCTACGTGGTaGTGCATATACATGCGTGCA +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKLLATW*CIYMRA
Trigger: TGCACGCATGTATATGCATCACCACGTAGCCAGGAG...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCCTCCTGGCTACGTGGTaGTGCATATACATGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPLLATW*CIYMRA
Trigger: TGCACGCATGTATATGCATCACCACGTAGCCAGGAG...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTTGGTGGAATATAGTGTaGCCCCCACATTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: FPLASPAISMGFFQMRDAWWNIV*PPHSGS
Trigger: TGACCCTGAATGTGGGGGGCACACTATATTCCACCA...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGGTAGAAGTCAGCCTCTaGCCTGAGCAGCGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRVEVSL*PEQRCL
Trigger: GAGACAGCGCTGCTCAGGGCAGAGGCTGACTTCTAC...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCGACACTCAGAGTCGGTaGAGAAAAGGTTGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSDTQSR*RKGWLG
Trigger: TCCGAGCCAACCTTTTCTGCACCGACTCTGAGTGTC...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAAGACACTCAGAGTCGGTaGAGAAAAGGTTGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKDTQSR*RKGWLG
Trigger: TCCGAGCCAACCTTTTCTGCACCGACTCTGAGTGTC...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGATGCTCCAGCCCCATTaGCATGGGGACTGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRMLQPH*HGDCPS
Trigger: GCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCAT...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGAGATATGAACCAGGATaGCAGGGACCTATACATCAG +
Preference number: 4 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWRYEPG*QGPIHQ
Trigger: CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCT...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCAACAGGTCCATGGTTaGCTCAGCAACCAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FPLASPAISMGFFQMRDAQQVHG*LSNQEF
Trigger: GAACTCTTGGTTGCTGAGGCAACCATGGACCTGTTG...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGCCGCCGCTCAGGTGTaGCCGATCTCACGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRAAAQV*PISRLQ
Trigger: TTGCAGACGTGAGATCGGGCACACCTGAGCGGCGGC...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCGGTTGGAGGCACAGGTaGAGCACACCCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSGWRHR*STPSKV
Trigger: AACCTTACTGGGTGTGCTCCACCTGTGCCTCCAACC...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCAGCTGTCAGATTCGCTaGGTTGGAGGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSSCQIR*VGGTGG
Trigger: TCCACCTGTGCCTCCAACCCAGCGAATCTGACAGCT...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACAAAGGCAGAACTTCCTaGGTGTGTGCAGAATTGGGT +
Preference number: 4 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHKGRTS*VCAELG
Trigger: ACCCAATTCTGCACACACCCAGGAAGTTCTGCCTTT...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATAGAGGAGGAGAAATTTTaGGAAGTACAGGAGACACCG +
Preference number: 4 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPIEEEKF*EVQETP
Trigger: CGGTGTCTCCTGTACTTCCCAAAATTTCTCCTCCTC...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAACTCCAGATGAAAATGTaGGCTCCCCTCTGCCCTATC +
Preference number: 4 (lower is better)
Translates to: GHPASGVEAMVQETALGKLQMKM*APLCPI
Trigger: GATAGGGCAGAGGGGAGCCCACATTTTCATCTGGAG...TTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTCCAAGAGACCGCATTaGGAAAATGCAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSSKRPH*ENAKSS
Trigger: GGAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGA...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTTGTTCCAGAGTGTTCTaGCCTCTCATTGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSCSRVF*PLIGQA
Trigger: GGCCTGACCAATGAGAGGCCAGAACACTCTGGAACA...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCAACCCCAAACAGGCCTaGACATGCGGACATCACAGA +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSNPKQA*TCGHHR
Trigger: TCTGTGATGTCCGCATGTCCAGGCCTGTTTGGGGTT...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGTGGACTGGCAGACGCTaGCGGGACGGGGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLWTGRR*RDGVTQ
Trigger: CTGAGTCACCCCGTCCCGCCAGCGTCTGCCAGTCCA...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR CCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCAGAGACTGGGCGGACTaGCTGGACTGGCAGACGCTG +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLRDWAD*LDWQTL
Trigger: CAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCT...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS-3UTR TCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGCCAGCCTCAGGAAATTaGGGATGTGCCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PQTSISFQGFARSSLGKEPASGN*GCAGRP
Trigger: AGGCCTTCCGGCACATCCTCAATTTCCTGAGGCTGG...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCCAGCCTCAGGAAATTaGGGATGTGCCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELPASGN*GCAGRP
Trigger: AGGCCTTCCGGCACATCCTCAATTTCCTGAGGCTGG...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCGGGGCCCACTCCAGATaGAAATGTGGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLGAHSR*KCGLPS
Trigger: AGAGGGGAGCCCACATTTTCATCTGGAGTGGGCCCC...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGGCAGAGACCTGGAGTTaGGCAGGTCTTCGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLAETWS*AGLRGR
Trigger: CCGACCCCGAAGACCTGCTCAACTCCAGGTCTCTGC...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGGACTCTCATAGCTCCTaGAGCAGAGCTGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMDSHSS*SRAGKR
Trigger: CCTCTTTCCAGCTCTGCTTCAGGAGCTATGAGAGTC...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCAAGCCCTTAAACACTaGGCTCCAAATCAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: FPLASPAISMGFFQMRDAQALKH*APNQGE
Trigger: CTCTCCTTGATTTGGAGCTCAGTGTTTAAGGGCTTG...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGGTCAGCCACACGGGCTaGTATGCACGCACACATGAA +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRVSHTG*YARTHE
Trigger: TTCATGTGTGCGTGCATATCAGCCCGTGTGGCTGAC...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTAACTTCCTGGGTGTGTaGAGAATTGGGTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSNFLGV*RIGSKL
Trigger: CAGCTTCGACCCAATTCTGCACACACCCAGGAAGTT...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCAACTTCCTGGGTGTGTaGAGAATTGGGTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSNFLGV*RIGSKL
Trigger: CAGCTTCGACCCAATTCTGCACACACCCAGGAAGTT...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGTCTAGTCGGAAGCCGTaGTCGAGAGCCACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLSSRKP*SRATRS
Trigger: GCTGCGGGTGGCTCTCGAGCACGGCTTCCGACTAGA...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCCCCCTGGCCAGCCCTaGCATCAGTATGGGATTCTT +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELPPGQP*HQYGIL
Trigger: AAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGG...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTCAACAGGTCCATGGTTaGCTCAGCAACCAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSQQVHG*LSNQEF
Trigger: GAACTCTTGGTTGCTGAGGCAACCATGGACCTGTTG...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCCAACAGGTCCATGGTTaGCTCAGCAACCAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPQQVHG*LSNQEF
Trigger: GAACTCTTGGTTGCTGAGGCAACCATGGACCTGTTG...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCAGGGAGCTTGAGGTCTaGACGTATCCGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSRELEV*TYPIWG
Trigger: ACCCCAAATCGGATACGTCCAGACCTCAAGCTCCCT...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCTCACCCCGGCTACTTTaGTGGTGGATGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLSPRLL*WWMGRW
Trigger: CCACCTCCCCATCCACCACCAAAGTAGCCGGGGTGA...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGCTGCCCTATCCCCACTaGCCACACCAAATCGGGCCC +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLLPYPH*PHQIGP
Trigger: GGGCCCGATTTGGTGTGGCCAGTGGGGATAGGGCAG...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMPLVSP*WAQVWE
Trigger: TTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGG...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCCAGGTTGAGACCTTCTaGACCACTTGTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSQVETF*TTCESL
Trigger: CAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTG...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTCAGGTTGAGACCTTCTaGACCACTTGTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSQVETF*TTCESL
Trigger: CAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTG...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTGAGGGGAAGGGAGCTTaGGGTCTGGACGTATCCGAT +
Preference number: 4 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSEGKGA*GLDVSD
Trigger: ATCGGATACGTCCAGACCTCAAGCTCCCTTCCCCTC...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCCAAGCCCTTAAACACTaGGCTCCAAATCAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPQALKH*APNQGE
Trigger: CTCTCCTTGATTTGGAGCTCAGTGTTTAAGGGCTTG...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGTCAGCAACACAGATATaGACCAGGATGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRSATQI*TRMPGT
Trigger: GGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGA...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAATGCTCCAGCCCCATTaGCATGGGGACTGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRMLQPH*HGDCPS
Trigger: GCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCAT...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTTCCAGATGAGGGATaGTCCAGCCCCATTGCCATG +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELLPDEG*SSPIAM
Trigger: CATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGAGCGACACCCCTCTGTaGTCTTCAGACAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRSDTPL*SSDSGF
Trigger: AAACCCACTGTCTGAAGACCACAGAGGGGTGTCGCT...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGTGGACGTATCCGATTTaGGGTGGTCAGCGACACCCC +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQWTYPI*GGQRHP
Trigger: GGGGTGTCGCTGACCACCCCAAATCGGATACGTCCA...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGACGGCTACTTTGGTGGTaGATGGGGAGGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRRLLWW*MGRWCQ
Trigger: CTGACACCACCTCCCCATCCACCACCAAAGTAGCCG...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGCGGTGCAGAAAAGGTTaGCTCGGAAGGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PQTSISFQGFARSSLGKERCRKG*LGRCPP
Trigger: AGGTGGACACCTTCCGAGCCAACCTTTTCTGCACCG...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGCTCCAGATGAAAATGTaGGCTCCCCTCTGCCCTATC +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRLQMKM*APLCPI
Trigger: GATAGGGCAGAGGGGAGCCCACATTTTCATCTGGAG...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCCAGGTTGAGACCTTCTaGACCACTTGTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSQVETF*TTCESL
Trigger: CAAGGACTCACAAGTGGTCCAGAAGGTCTCAACCTG...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGAAATCAAGGAGAGACTaGAGGTGCTCAGCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMKSRRD*RCSALG
Trigger: GCCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTT...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCTTGCTAGGTCTAGTCTaGGTAAAGAGATGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPLLGLV*VKRCSP
Trigger: GGGGGAACATCTCTTTACCCAGACTAGACCTAGCAA...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGGTATCCCACCCGCTCTaGGACCCAGAAATCCCATCC +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQVSHPL*DPEIPS
Trigger: GGATGGGATTTCTGGGTCCCAGAGCGGGTGGGATAC...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAGCCCTTAAACACTaGGCTCCAAATCAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMQALKH*APNQGE
Trigger: CTCTCCTTGATTTGGAGCTCAGTGTTTAAGGGCTTG...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGATGGGATTCTTCCAGATaGGGGATGCTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRWDSSR*GMLQPH
Trigger: ATGGGGCTGGAGCATCCCTCATCTGGAAGAATCCCA...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCCTGGCTACGTGGTaGTGCATATACATGCGTGCA +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELLLATW*CIYMRA
Trigger: TGCACGCATGTATATGCATCACCACGTAGCCAGGAG...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCGACACTCAGAGTCGGTaGAGAAAAGGTTGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELDTQSR*RKGWLG
Trigger: TCCGAGCCAACCTTTTCTGCACCGACTCTGAGTGTC...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCAGATATGAACCAGGATaGCAGGGACCTATACATCAG +
Preference number: 4 (lower is better)
Translates to: MVASATKSSIQASEAQLSRYEPG*QGPIHQ
Trigger: CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCT...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGCCAGTGAAGAAGCTGTaGGTGAGTATCCCACCCGCT +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQPVKKL*VSIPPA
Trigger: AGCGGGTGGGATACTCACGCACAGCTTCTTCACTGG...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTACACCCAGTAAGGTTTaGGGCTCACCCCGGCTACTT +
Preference number: 4 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSTPSKV*GSPRLL
Trigger: AAGTAGCCGGGGTGAGCCCCAAACCTTACTGGGTGT...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGACACCCAGTAAGGTTTaGGGCTCACCCCGGCTACTT +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQTPSKV*GSPRLL
Trigger: AAGTAGCCGGGGTGAGCCCCAAACCTTACTGGGTGT...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGGGTTGGAGGCACAGGTaGAGCACACCCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQGWRHR*STPSKV
Trigger: AACCTTACTGGGTGTGCTCCACCTGTGCCTCCAACC...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGTCAGATTCGCTGGGTTaGAGGCACAGGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQSDSLG*RHRWST
Trigger: TGTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGA...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGGGGTGTGTGCAGAATTaGGTCGAAGCTGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRGCVQN*VEAVRF
Trigger: GAATCTGACAGCTTCGACCCAATTCTGCACACACCC...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCACATCTACATCTGCGTaGAGCAGGGCAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLTSTSA*SRAAVG
Trigger: ACCCACAGCTGCCCTGCTCCACGCAGATGTAGATGT...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGACGGTGCAGAAAAGGTTaGCTCGGAAGGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRRCRKG*LGRCPP
Trigger: AGGTGGACACCTTCCGAGCCAACCTTTTCTGCACCG...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCTTGCTAGGTCTAGTCTaGGTAAAGAGATGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RRDWRCSALGKNKLREPSLLGLV*VKRCSP
Trigger: GGGGGAACATCTCTTTACCCAGACTAGACCTAGCAA...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGACCAACAGGCCCCTCCTaGCTACGTGGTGATGCATAT +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRPTGPS*LRGDAY
Trigger: ATATGCATCACCACGTAGCCAGGAGGGGCCTGTTGG...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CAA 72 bp TGGGTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTaGGAACATAGCAAAGAACTCCTCTTCCGATGTTCC +
Preference number: 4 (lower is better)
Translates to: WVVAFLPPSVDG*EHSKELLFRCS
Trigger: GGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCTCCCCACAGTCAAACTaGGAACAGCATCCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLSPQSN*EQHPQC
Trigger: GCACTGAGGATGCTGTTCTCAGTTTGACTGTGGGGA...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGTGGGATTCTTCCAGATaGGGGATGCTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLWDSSR*GMLQPH
Trigger: ATGGGGCTGGAGCATCCCTCATCTGGAAGAATCCCA...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCAACTTCCTGGGTGTGTaGAGAATTGGGTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELNFLGV*RIGSKL
Trigger: CAGCTTCGACCCAATTCTGCACACACCCAGGAAGTT...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCAGGAAATTGAGGATGTaGCGGAAGGCCTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLRKLRM*RKALPS
Trigger: GGATGGCAAGGCCTTCCGGCACATCCTCAATTTCCT...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAAGCGACACCCCTCTGTaGTCTTCAGACAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRSDTPL*SSDSGF
Trigger: AAACCCACTGTCTGAAGACCACAGAGGGGTGTCGCT...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAAGGGAGCTTGAGGTCTaGACGTATCCGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRRELEV*TYPIWG
Trigger: ACCCCAAATCGGATACGTCCAGACCTCAAGCTCCCT...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGAAAGGCAGAACTTCCTaGGTGTGTGCAGAATTGGGT +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRKGRTS*VCAELG
Trigger: ACCCAATTCTGCACACACCCAGGAAGTTCTGCCTTT...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGGAGGAGGAGAAATTTTaGGAAGTACAGGAGACACCG +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLREEEKF*EVQETP
Trigger: CGGTGTCTCCTGTACTTCCCAAAATTTCTCCTCCTC...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCTGGTGGGCTCAGGTTTaGGAATTCCTGCCCACATCT +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLWWAQV*EFLPTS
Trigger: AGATGTGGGCAGGAATTCCCAAACCTGAGCCCACCA...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGACCACTTGTGAGTCCTTaGTGGGCTCAGGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRPLVSP*WAQVWE
Trigger: TTCCCAAACCTGAGCCCACCAAGGACTCACAAGTGG...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGTCCAAGAGACCGCATTaGGAAAATGCAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLNTELQIKERLEVLSLRSKRPH*ENAKSS
Trigger: GGAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGA...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTTGTTCCAGAGTGTTCTaGCCTCTCATTGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSCSRVF*PLIGQA
Trigger: GGCCTGACCAATGAGAGGCCAGAACACTCTGGAACA...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGTGTTCCAGAGTGTTCTaGCCTCTCATTGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQCSRVF*PLIGQA
Trigger: GGCCTGACCAATGAGAGGCCAGAACACTCTGGAACA...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGTACATCAACCTAGGGTaGGTTGTGGCCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PQTSISFQGFARSSLGKEYINLG*VVAFLP
Trigger: AGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTA...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCTACATCAACCTAGGGTaGGTTGTGGCCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELYINLG*VVAFLP
Trigger: AGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTA...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
3UTR CAA 72 bp TCCCTTTTCCCCAGACCTCAATATCCTTCCAGGGTTTaGCTAGGTCTAGTCTGGGTAAAGAGATGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SLFPRPQYPSRV*LGLVWVKRCSP
Trigger: GGGGGAACATCTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGGAAAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR TCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGTCCCCACAGTCAAACTaGGAACAGCATCCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLSPQSN*EQHPQC
Trigger: GCACTGAGGATGCTGTTCTCAGTTTGACTGTGGGGA...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGGTCTTCAGACAGTaGGTTTCCGGAATCCAACCA +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRVVFRQ*VSGIQP
Trigger: TGGTTGGATTCCGGAAACCCACTGTCTGAAGACCAC...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGGTGGTCTTCAGACAGTaGGTTTCCGGAATCCAACCA +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQVVFRQ*VSGIQP
Trigger: TGGTTGGATTCCGGAAACCCACTGTCTGAAGACCAC...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCGAGGAGGAGAAATTTTaGGAAGTACAGGAGACACCG +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELEEEKF*EVQETP
Trigger: CGGTGTCTCCTGTACTTCCCAAAATTTCTCCTCCTC...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGTCAGGGTCTCCAAAGTaGTGGAATATAGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQSGSPK*WNIVCP
Trigger: GGGGCACACTATATTCCACCACTTTGGAGACCCTGA...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGCTCCAGATGAAAATGTaGGCTCCCCTCTGCCCTATC +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLLQMKM*APLCPI
Trigger: GATAGGGCAGAGGGGAGCCCACATTTTCATCTGGAG...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTCTTGTGAGTCCTTGGTaGGCTCAGGTTTGGGAATTC +
Preference number: 4 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSLVSPW*AQVWEF
Trigger: GAATTCCCAAACCTGAGCCCACCAAGGACTCACAAG...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCAAATCAAGGAGAGACTaGAGGTGCTCAGCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLKSRRD*RCSALG
Trigger: GCCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTT...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGTCCAAGAGACCGCATTaGGAAAATGCAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PQTSISFQGFARSSLGKESKRPH*ENAKSS
Trigger: GGAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGA...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGAACCCCAAACAGGCCTaGACATGCGGACATCACAGA +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLNPKQA*TCGHHR
Trigger: TCTGTGATGTCCGCATGTCCAGGCCTGTTTGGGGTT...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCAGATATGAACCAGGATaGCAGGGACCTATACATCAG +
Preference number: 4 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELRYEPG*QGPIHQ
Trigger: CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCT...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGGTGGTCTTCAGACAGTaGGTTTCCGGAATCCAACCA +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLVVFRQ*VSGIQP
Trigger: TGGTTGGATTCCGGAAACCCACTGTCTGAAGACCAC...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCAAAGGCAGAACTTCCTaGGTGTGTGCAGAATTGGGT +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLKGRTS*VCAELG
Trigger: ACCCAATTCTGCACACACCCAGGAAGTTCTGCCTTT...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCTTGCTAGGTCTAGTCTaGGTAAAGAGATGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLLLGLV*VKRCSP
Trigger: GGGGGAACATCTCTTTACCCAGACTAGACCTAGCAA...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR GCA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAAGATATGAACCAGGATaGCAGGGACCTATACATCAG +
Preference number: 4 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRRYEPG*QGPIHQ
Trigger: CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCT...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGTTGCTAGGTCTAGTCTaGGTAAAGAGATGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLLLGLV*VKRCSP
Trigger: GGGGGAACATCTCTTTACCCAGACTAGACCTAGCAA...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CCA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGTCCAAGAGACCGCATTaGGAAAATGCAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLSKRPH*ENAKSS
Trigger: GGAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGA...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp CCCCGCCCCCGCGAGGCTCGCGCGGCCCGGGCGGAGGTGGGAGGCTaGAGGCGAGTCTCGGACGCGAGAGACTGGGCGGACTGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PRPREARAARAEVGG*RRVSDARDWADWLD
Trigger: GTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGACTCGCCTCCAGCCTCCCACCTCCGCCCGGGCCGCGCGAGCCTCGCGGGGGCGGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 90 bp CCCCGGGCAGATCGCTGCCGCCGTGGACGAGTCCAGCCAGGGCTCTaGGGCCACTCAGAGGCCTGGCCTGGCTGCCGGCGCGGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PRADRCRRGRVQPGL*GHSEAWPGCRRGSQ
Trigger: CTGGGACCCGCGCCGGCAGCCAGGCCAGGCCTCTGAGTGGCCCCAGAGCCCTGGCTGGACTCGTCCACGGCGGCAGCGATCTGCCCGGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS TCA 90 bp CCTGGCCTGGCTGCCGGCGCGGGTCCCAGGAGATGGAGGCCGAACTaGCGGGAGCGGATGGCGGAGCCCCCTTGTATCCGCCGGGGAGCG +
Preference number: 5 (lower is better)
Translates to: PGLAAGAGPRRWRPN*RERMAEPPCIRRGA
Trigger: CGCTCCCCGGCGGATACAAGGGGGCTCCGCCATCCGCTCCCGTCAGTTCGGCCTCCATCTCCTGGGACCCGCGCCGGCAGCCAGGCCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp CGGGCGGAGGTGGGAGGCTGGAGGCGAGTCTCGGACGCGAGAGACTaGGCGGACTGGCTGGACTGGCAGACGCTGGCGGGACGGGGTGAC +
Preference number: 5 (lower is better)
Translates to: RAEVGGWRRVSDARD*ADWLDWQTLAGRGD
Trigger: GTCACCCCGTCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGACTCGCCTCCAGCCTCCCACCTCCGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 90 bp CCGGCGCGGGTCCCAGGAGATGGAGGCCGAACTGACGGGAGCGGATaGCGGAGCCCCCTTGTATCCGCCGGGGAGCGACGATGCGTGCTC +
Preference number: 5 (lower is better)
Translates to: PARVPGDGGRTDGSG*RSPLVSAGERRCVL
Trigger: GAGCACGCATCGTCGCTCCCCGGCGGATACAAGGGGGCTCCGCCATCCGCTCCCGTCAGTTCGGCCTCCATCTCCTGGGACCCGCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp TGGAGGCGAGTCTCGGACGCGAGAGACTGGGCGGACTGGCTGGACTaGCAGACGCTGGCGGGACGGGGTGACTCAGGCACGTCGCCCCGG +
Preference number: 5 (lower is better)
Translates to: WRRVSDARDWADWLD*QTLAGRGDSGTSPR
Trigger: CCGGGGCGACGTGCCTGAGTCACCCCGTCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGACTCGCCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS GCA 90 bp GGGCCGACTCTGAAGGGATGGCCTCCGAGACCCCGGGCAGATCGCTaGCGCCGTGGACGAGTCCAGCCAGGGCTCTGGGGCCACTCAGAG +
Preference number: 5 (lower is better)
Translates to: GPTLKGWPPRPRADR*RRGRVQPGLWGHSE
Trigger: CTCTGAGTGGCCCCAGAGCCCTGGCTGGACTCGTCCACGGCGGCAGCGATCTGCCCGGGGTCTCGGAGGCCATCCCTTCAGAGTCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp TCTCGGACGCGAGAGACTGGGCGGACTGGCTGGACTGGCAGACGCTaGCGGGACGGGGTGACTCAGGCACGTCGCCCCGGATGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SRTRETGRTGWTGRR*RDGVTQARRPGCGH
Trigger: GTGGCCACATCCGGGGCGACGTGCCTGAGTCACCCCGTCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 90 bp GAGGCTGGAGGCGAGTCTCGGACGCGAGAGACTGGGCGGACTGGCTaGACTGGCAGACGCTGGCGGGACGGGGTGACTCAGGCACGTCGC +
Preference number: 5 (lower is better)
Translates to: EAGGESRTRETGRTG*TGRRWRDGVTQARR
Trigger: GCGACGTGCCTGAGTCACCCCGTCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGACTCGCCTCCAGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 90 bp GTGGGAGGCTGGAGGCGAGTCTCGGACGCGAGAGACTGGGCGGACTaGCTGGACTGGCAGACGCTGGCGGGACGGGGTGACTCAGGCACG +
Preference number: 5 (lower is better)
Translates to: VGGWRRVSDARDWAD*LDWQTLAGRGDSGT
Trigger: CGTGCCTGAGTCACCCCGTCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGACTCGCCTCCAGCCTCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 90 bp ATGGAAACAGCCAGGAGTTTCGGGACCCGGCCGCGCCGCCTTCCCTaGGTGTCGCCGCAGCCGCTGAGGTCCTCTCCGCCCCCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: METARSFGTRPRRLP*VSPQPLRSSPPPGS
Trigger: ACTTCCTGGGGGCGGAGAGGACCTCAGCGGCTGCGGCGACACCCAGGGAAGGCGGCGCGGCCGGGTCCCGAAACTCCTGGCTGTTTCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS TCA 90 bp AGCGACGATGCGTGCTCAGCCCGGGCTGGGAGTGTCCGAGGGCTCTaGTGGAAACAGCCAGGAGTTTCGGGACCCGGCCGCGCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: SDDACSARAGSVRGL*WKQPGVSGPGRAAF
Trigger: GAAGGCGGCGCGGCCGGGTCCCGAAACTCCTGGCTGTTTCCATCAGAGCCCTCGGACACTCCCAGCCCGGGCTGAGCACGCATCGTCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp AACCAGCAGGTGACGGTGGCGAGCACAGGGCCGACTCTGAAGGGATaGCCTCCGAGACCCCGGGCAGATCGCTGCCGCCGTGGACGAGTC +
Preference number: 5 (lower is better)
Translates to: NQQVTVASTGPTLKG*PPRPRADRCRRGRV
Trigger: GACTCGTCCACGGCGGCAGCGATCTGCCCGGGGTCTCGGAGGCCATCCCTTCAGAGTCGGCCCTGTGCTCGCCACCGTCACCTGCTGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp CCCCTTGTATCCGCCGGGGAGCGACGATGCGTGCTCAGCCCGGGCTaGGAGTGTCCGAGGGCTCTGATGGAAACAGCCAGGAGTTTCGGG +
Preference number: 5 (lower is better)
Translates to: PLVSAGERRCVLSPG*ECPRALMETARSFG
Trigger: CCCGAAACTCCTGGCTGTTTCCATCAGAGCCCTCGGACACTCCCAGCCCGGGCTGAGCACGCATCGTCGCTCCCCGGCGGATACAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGCTGCCCTGGGCGGCCTaGGGCCTTCCCCAGCTATCT +
Preference number: 5 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWLPWAA*GLPQLS
Trigger: AGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGGCAG...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTCTCACCCCGGCTACTTaGGTGGTGGATGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVLTPAT*VVDGEV
Trigger: CACCTCCCCATCCACCACCAAAGTAGCCGGGGTGAG...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACCTGCCCTGGGCGGCCTaGGGCCTTCCCCAGCTATCT +
Preference number: 5 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHLPWAA*GLPQLS
Trigger: AGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGGCAG...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCTGGGCGGCCTTGGGCCTTCCCCAGCTATCTCCTAGCAACAGGTCCATGGTTCCCAGCCTCAGGAAATaGAGGATGTGCCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: PWAALGLPQLSPSNRSMVPSLRK*RMCRKA
Trigger: GGCCTTCCGGCACATCCTCAATTTCCTGAGGCTGGG...AACCATGGACCTGTTGCTAGGAGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCTGCCCTGGGCGGCCTaGGGCCTTCCCCAGCTATCT +
Preference number: 5 (lower is better)
Translates to: FPLASPAISMGFFQMRDALPWAA*GLPQLS
Trigger: AGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGGCAG...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp CCGATTTGGGGTGGTCAGCGACACCCCTCTGTGGTCTTCAGACAGTaGGTTTCCGGAATCCAACCAGCAGGTGACGGTGGCGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: PIWGGQRHPSVVFRQ*VSGIQPAGDGGEHR
Trigger: CCTGTGCTCGCCACCGTCACCTGCTGGTTGGATTCCGGAAACCCACTGTCTGAAGACCACAGAGGGGTGTCGCTGACCACCCCAAATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCGTCAGATTCGCTGGGTaGGAGGCACAGGTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPVRFAG*EAQVEH
Trigger: GTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGAC...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATGTGCCGGAAGGCCTaGCCATCCCGGTCGATGAAG +
Preference number: 5 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPMCRKA*PSRSMK
Trigger: CTTCATCGACCGGGATGGCAAGGCCTTCCGGCACAT...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTCCAGCCCCATGTGCCGGAAGGCCTaGCCATCCCGGTCGATGAAG +
Preference number: 5 (lower is better)
Translates to: GQPCHQYGILPDEGCSSPMCRKA*PSRSMK
Trigger: CTTCATCGACCGGGATGGCAAGGCCTTCCGGCACAT...GGGGCTGGAGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GGTCCATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCCTGGACGTATCCGATTaGGGGTGGTCAGCGACACCC +
Preference number: 5 (lower is better)
Translates to: GPWLPQQPRVPYRPQRPSLDVSD*GWSATP
Trigger: GGGTGTCGCTGACCACCCCAAATCGGATACGTCCAG...GCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCATGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCAGAGGGGAAGGGAGCTaGAGGTCTGGACGTATCCGA +
Preference number: 5 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPRGEGS*RSGRIR
Trigger: TCGGATACGTCCAGACCTCAAGCTCCCTTCCCCTCT...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATAGTCAGATTCGCTGGGTaGGAGGCACAGGTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPIVRFAG*EAQVEH
Trigger: GTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGAC...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CTTCCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCTCGGTGCAGAAAAGGTaGGCTCGGAAGGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: LPDEGCSSPIAMGTVLAPSVQKR*ARKVST
Trigger: GGTGGACACCTTCCGAGCCAACCTTTTCTGCACCGA...GGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS TCA 90 bp GAGAACAGCATCCTCAGTGCCGGACAAAGCGCAGAGACCTGGAGTTaGGCAGGTCTTCGGGGTCGGGGAAGACAGAGTCTAGTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: ENSILSAGQSAETWS*AGLRGRGRQSLVGS
Trigger: GCTTCCGACTAGACTCTGTCTTCCCCGACCCCGAAGACCTGCTCAACTCCAGGTCTCTGCGCTTTGTCCGGCACTGAGGATGCTGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS GCA 90 bp CCACACCAAATCGGGCCCGCAAAGCACCTAGACACTCAGAGTCGGTaGAGAAAAGGTTGGCTCGGAAGGTGTCCACCTGGACGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: PHQIGPAKHLDTQSR*RKGWLGRCPPGRSS
Trigger: TGAGCTCCGTCCAGGTGGACACCTTCCGAGCCAACCTTTTCTGCACCGACTCTGAGTGTCTAGGTGCTTTGCGGGCCCGATTTGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp CAGCCAGAGAGGGGAAGGGAGCTTGAGGTCTGGACGTATCCGATTTaGGGTGGTCAGCGACACCCCTCTGTGGTCTTCAGACAGTGGGTT +
Preference number: 5 (lower is better)
Translates to: QPERGRELEVWTYPI*GGQRHPSVVFRQWV
Trigger: AACCCACTGTCTGAAGACCACAGAGGGGTGTCGCTGACCACCCCAAATCGGATACGTCCAGACCTCAAGCTCCCTTCCCCTCTCTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp CTGGGTGTGTGCAGAATTGGGTCGAAGCTGTCAGATTCGCTGGGTTaGAGGCACAGGTGGAGCACACCCAGTAAGGTTTGGGGCTCACCC +
Preference number: 5 (lower is better)
Translates to: LGVCRIGSKLSDSLG*RHRWSTPSKVWGSP
Trigger: GGGTGAGCCCCAAACCTTACTGGGTGTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGACAGCTTCGACCCAATTCTGCACACACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCGATGGCGGAGCCCCCTaGTATCCGCCGGGGAGCGAC +
Preference number: 5 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELDGGAP*YPPGSD
Trigger: GTCGCTCCCCGGCGGATACAAGGGGGCTCCGCCATC...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGGATGGCGGAGCCCCCTaGTATCCGCCGGGGAGCGAC +
Preference number: 5 (lower is better)
Translates to: PQTSISFQGFARSSLGKEDGGAP*YPPGSD
Trigger: GTCGCTCCCCGGCGGATACAAGGGGGCTCCGCCATC...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGACATGCGGACATCACAGAGGGGAAGGGAGCTaGAGGTCTGGACGTATCCGA +
Preference number: 5 (lower is better)
Translates to: VPEESLGNPKQAWTCGHHRGEGS*RSGRIR
Trigger: TCGGATACGTCCAGACCTCAAGCTCCCTTCCCCTCT...GTGATGTCCGCATGTCCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGCAGGGTCAGCACAGGTaGAGACCTTCTGGACCACTT +
Preference number: 5 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGQGQHR*RPSGPL
Trigger: AAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCTG...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp AGGTCTGGACGTATCCGATTTGGGGTGGTCAGCGACACCCCTCTGTaGTCTTCAGACAGTGGGTTTCCGGAATCCAACCAGCAGGTGACG +
Preference number: 5 (lower is better)
Translates to: RSGRIRFGVVSDTPL*SSDSGFPESNQQVT
Trigger: CGTCACCTGCTGGTTGGATTCCGGAAACCCACTGTCTGAAGACCACAGAGGGGTGTCGCTGACCACCCCAAATCGGATACGTCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp AGAATTGGGTCGAAGCTGTCAGATTCGCTGGGTTGGAGGCACAGGTaGAGCACACCCAGTAAGGTTTGGGGCTCACCCCGGCTACTTTGG +
Preference number: 5 (lower is better)
Translates to: RIGSKLSDSLGWRHR*STPSKVWGSPRLLW
Trigger: CCAAAGTAGCCGGGGTGAGCCCCAAACCTTACTGGGTGTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGACAGCTTCGACCCAATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 90 bp GGGCCCGCAAAGCACCTAGACACTCAGAGTCGGTGCAGAAAAGGTTaGCTCGGAAGGTGTCCACCTGGACGGAGCTCAGCTCATAGTGAT +
Preference number: 5 (lower is better)
Translates to: GPAKHLDTQSRCRKG*LGRCPPGRSSAHSD
Trigger: ATCACTATGAGCTGAGCTCCGTCCAGGTGGACACCTTCCGAGCCAACCTTTTCTGCACCGACTCTGAGTGTCTAGGTGCTTTGCGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTGATGGCGGAGCCCCCTaGTATCCGCCGGGGAGCGAC +
Preference number: 5 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSDGGAP*YPPGSD
Trigger: GTCGCTCCCCGGCGGATACAAGGGGGCTCCGCCATC...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGGATGGCGGAGCCCCCTaGTATCCGCCGGGGAGCGAC +
Preference number: 5 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQDGGAP*YPPGSD
Trigger: GTCGCTCCCCGGCGGATACAAGGGGGCTCCGCCATC...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCTCACCCCGGCTACTTaGGTGGTGGATGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMLTPAT*VVDGEV
Trigger: CACCTCCCCATCCACCACCAAAGTAGCCGGGGTGAG...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCGTCAGATTCGCTGGGTaGGAGGCACAGGTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: MVASATKSSIQASEAQLSVRFAG*EAQVEH
Trigger: GTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGAC...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp ATGGTTGCCTCAGCAACCAAGAGTTCCATACAGGCCTCAGAGGCCCAGCTAAGCATGTGCCGGAAGGCCTaGCCATCCCGGTCGATGAAG +
Preference number: 5 (lower is better)
Translates to: MVASATKSSIQASEAQLSMCRKA*PSRSMK
Trigger: CTTCATCGACCGGGATGGCAAGGCCTTCCGGCACAT...GCTTAGCTGGGCCTCTGAGGCCTGTATGGAACTCTTGGTTGCTGAGGCAACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCAGATGAGGGATGCTCCAGCCCCATTGCCATGGGGACTGTCCTAGCTCCCATAACCACTTGTGAGTCCTaGGTGGGCTCAGGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: PDEGCSSPIAMGTVLAPITTCES*VGSGLG
Trigger: TCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGT...TATGGGAGCTAGGACAGTCCCCATGGCAATGGGGCTGGAGCATCCCTCATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGTGGGTGTGTGCAGAATaGGGTCGAAGCTGTCAGATT +
Preference number: 5 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWWVCAE*GRSCQI
Trigger: AATCTGACAGCTTCGACCCAATTCTGCACACACCCA...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCACAGACACACCCTGTGCCAGAAGAGTCGCTAGGCAACCCCAAACAGGCCTGGGGAGGAGGAGAAATTTaGGGAAGTACAGGAGACACC +
Preference number: 5 (lower is better)
Translates to: PQTHPVPEESLGNPKQAWGGGEI*GSTGDT
Trigger: GGTGTCTCCTGTACTTCCCAAAATTTCTCCTCCTCC...CCAGGCCTGTTTGGGGTTGCCTAGCGACTCTTCTGGCACAGGGTGTGTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GCCAGGCCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGGGAGGAGGAGAAATTTaGGGAAGTACAGGAGACACC +
Preference number: 5 (lower is better)
Translates to: ARPPSFRSRSHGPRDRIGGGGEI*GSTGDT
Trigger: GGTGTCTCCTGTACTTCCCAAAATTTCTCCTCCTCC...CCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTACCACTTGTGAGTCCTaGGTGGGCTCAGGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: FPLASPAISMGFFQMRDATTCES*VGSGLG
Trigger: TCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGT...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGACTGCCCTGGGCGGCCTaGGGCCTTCCCCAGCTATCT +
Preference number: 5 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRLPWAA*GLPQLS
Trigger: AGATAGCTGGGGAAGGCCCAAGGCCGCCCAGGGCAG...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCACCCCGGCTACTTaGGTGGTGGATGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELLTPAT*VVDGEV
Trigger: CACCTCCCCATCCACCACCAAAGTAGCCGGGGTGAG...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGCTCACCCCGGCTACTTaGGTGGTGGATGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PQTSISFQGFARSSLGKELTPAT*VVDGEV
Trigger: CACCTCCCCATCCACCACCAAAGTAGCCGGGGTGAG...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CTAGCTCCCATACATCAACCTAGGGTGGGTTGTGGCCTTTCTGCCTCCCTCAGTTTGGTGGGCTCAGGTTaGGGAATTCCTGCCCACATC +
Preference number: 5 (lower is better)
Translates to: LAPIHQPRVGCGLSASLSLVGSG*GIPAHI
Trigger: GATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAA...ACTGAGGGAGGCAGAAAGGCCACAACCCACCCTAGGTTGATGTATGGGAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GGGAATTCCTGCCCACATCTGAGCTCCAGTCAGGTGCAGGAGAGTCCCGACTCTGTCCAAGAGACCGCATaGGGAAAATGCAAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GNSCPHLSSSQVQESPDSVQETA*GKCKVL
Trigger: GAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGAC...AGAGTCGGGACTCTCCTGCACCTGACTGGAGCTCAGATGTGGGCAGGAATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTTGGGTGTGTGCAGAATaGGGTCGAAGCTGTCAGATT +
Preference number: 5 (lower is better)
Translates to: FPLASPAISMGFFQMRDAWVCAE*GRSCQI
Trigger: AATCTGACAGCTTCGACCCAATTCTGCACACACCCA...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGTTGGTGGGCTCAGGTTaGGGAATTCCTGCCCACATC +
Preference number: 5 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMLVGSG*GIPAHI
Trigger: GATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAA...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTGTCCAAGAGACCGCATaGGGAAAATGCAAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: FPLASPAISMGFFQMRDAVQETA*GKCKVL
Trigger: GAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGAC...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCGTCAGATTCGCTGGGTaGGAGGCACAGGTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLVRFAG*EAQVEH
Trigger: GTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGAC...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCGGAGGAGGAGAAATTTaGGGAAGTACAGGAGACACC +
Preference number: 5 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPGGGEI*GSTGDT
Trigger: GGTGTCTCCTGTACTTCCCAAAATTTCTCCTCCTCC...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTCCCAGCCTCAGGAAATaGAGGATGTGCCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSPSLRK*RMCRKA
Trigger: GGCCTTCCGGCACATCCTCAATTTCCTGAGGCTGGG...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCCCCAGCCTCAGGAAATaGAGGATGTGCCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLPSLRK*RMCRKA
Trigger: GGCCTTCCGGCACATCCTCAATTTCCTGAGGCTGGG...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGTCGGTGCAGAAAAGGTaGGCTCGGAAGGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: PQTSISFQGFARSSLGKESVQKR*ARKVST
Trigger: GGTGGACACCTTCCGAGCCAACCTTTTCTGCACCGA...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGTTGGTGGGCTCAGGTTaGGGAATTCCTGCCCACATC +
Preference number: 5 (lower is better)
Translates to: PLNTELQIKERLEVLSLRLVGSG*GIPAHI
Trigger: GATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAA...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp TTCCCCCTGGCCAGCCCTGCCATCAGTATGGGATTCTTCCAGATGAGGGATGCTTATCCTTCCAGGGTTTaGCTAGGTCTAGTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: FPLASPAISMGFFQMRDAYPSRV*LGLVWV
Trigger: TACCCAGACTAGACCTAGCAAAACCCTGGAAGGATA...AGCATCCCTCATCTGGAAGAATCCCATACTGATGGCAGGGCTGGCCAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCACCCAGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGTGGGTGTGTGCAGAATaGGGTCGAAGCTGTCAGATT +
Preference number: 5 (lower is better)
Translates to: PPSFRSRSHGPRDRIGKMWVCAE*GRSCQI
Trigger: AATCTGACAGCTTCGACCCAATTCTGCACACACCCA...CATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp AGCTTCAGGAGTAGAAGCCATGGTCCAAGAGACCGCATTGGGAAAATGCAAAGTTCGGTGCAGAAAAGGTaGGCTCGGAAGGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: SFRSRSHGPRDRIGKMQSSVQKR*ARKVST
Trigger: GGTGGACACCTTCCGAGCCAACCTTTTCTGCACCGA...ACTTTGCATTTTCCCAATGCGGTCTCTTGGACCATGGCTTCTACTCCTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGCAGGGTCAGCACAGGTaGAGACCTTCTGGACCACTT +
Preference number: 5 (lower is better)
Translates to: PQTSISFQGFARSSLGKEQGQHR*RPSGPL
Trigger: AAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCTG...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CTTCTCTTACCTCTCACCAGGAAGATCCCAGTGACTCAAACCCCAACAGGCCCCTATCCTTCCAGGGTTTaGCTAGGTCTAGTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LLLPLTRKIPVTQTPTGPYPSRV*LGLVWV
Trigger: TACCCAGACTAGACCTAGCAAAACCCTGGAAGGATA...GGGGCCTGTTGGGGTTTGAGTCACTGGGATCTTCCTGGTGAGAGGTAAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp AGGAGAGACTGGAGGTGCTCAGCCTTAGGCAAGAACAAGCTGAGAGAACCTTCCGTCCAAGAGACCGCATaGGGAAAATGCAAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: RRDWRCSALGKNKLREPSVQETA*GKCKVL
Trigger: GAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGAC...GGAAGGTTCTCTCAGCTTGTTCTTGCCTAAGGCTGAGCACCTCCAGTCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCTTAAACACTGAGCTCCAAATCAAGGAGAGACTGGAGGTGCTCAGCCTTAGGGGAGGAGGAGAAATTTaGGGAAGTACAGGAGACACC +
Preference number: 5 (lower is better)
Translates to: PLNTELQIKERLEVLSLRGGGEI*GSTGDT
Trigger: GGTGTCTCCTGTACTTCCCAAAATTTCTCCTCCTCC...CCTAAGGCTGAGCACCTCCAGTCTCTCCTTGATTTGGAGCTCAGTGTTTAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGTCGGTGCAGAAAAGGTaGGCTCGGAAGGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLSVQKR*ARKVST
Trigger: GGTGGACACCTTCCGAGCCAACCTTTTCTGCACCGA...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp TTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCTTGGTGGGCTCAGGTTaGGGAATTCCTGCCCACATC +
Preference number: 5 (lower is better)
Translates to: LEHSKELLFRCSRVFWPLLVGSG*GIPAHI
Trigger: GATGTGGGCAGGAATTCCCAAACCTGAGCCCACCAA...GAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAACCACTTGTGAGTCCTaGGTGGGCTCAGGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: PSVDGLEHSKELLFRCSRTTCES*VGSGLG
Trigger: TCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGT...TCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGACCACTTGTGAGTCCTaGGTGGGCTCAGGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLTTCES*VGSGLG
Trigger: TCCCAAACCTGAGCCCACCAAGGACTCACAAGTGGT...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp AACATAGCAAAGAACTCCTCTTCCGATGTTCCAGAGTGTTCTGGCCTCTCATTGCAGGGTCAGCACAGGTaGAGACCTTCTGGACCACTT +
Preference number: 5 (lower is better)
Translates to: NIAKNSSSDVPECSGLSLQGQHR*RPSGPL
Trigger: AAGTGGTCCAGAAGGTCTCAACCTGTGCTGACCCTG...CAATGAGAGGCCAGAACACTCTGGAACATCGGAAGAGGAGTTCTTTGCTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CCCCAGACCTCAATATCCTTCCAGGGTTTTGCTAGGTCTAGTCTGGGTAAAGAGGTCCAAGAGACCGCATaGGGAAAATGCAAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: PQTSISFQGFARSSLGKEVQETA*GKCKVL
Trigger: GAGGACTTTGCATTTTCCCAATGCGGTCTCTTGGAC...CTCTTTACCCAGACTAGACCTAGCAAAACCCTGGAAGGATATTGAGGTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp CACTGTAGTCAGCAACACAGATATGAACCAGGATGCCAGGGACCTATACATCAGTGGGTGTGTGCAGAATaGGGTCGAAGCTGTCAGATT +
Preference number: 5 (lower is better)
Translates to: HCSQQHRYEPGCQGPIHQWVCAE*GRSCQI
Trigger: AATCTGACAGCTTCGACCCAATTCTGCACACACCCA...CTGATGTATAGGTCCCTGGCATCCTGGTTCATATCTGTGTTGCTGACTACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS-3UTR CAA 90 bp GTTGTGGCCTTTCTGCCTCCCTCAGTAGATGGCTTGGAACATAGCAAAGAACTCTATCCTTCCAGGGTTTaGCTAGGTCTAGTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: VVAFLPPSVDGLEHSKELYPSRV*LGLVWV
Trigger: TACCCAGACTAGACCTAGCAAAACCCTGGAAGGATA...GAGTTCTTTGCTATGTTCCAAGCCATCTACTGAGGGAGGCAGAAAGGCCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS TCA 72 bp GCTGCCGGCGCGGGTCCCAGGAGATGGAGGCCGAACTaGCGGGAGCGGATGGCGGAGCCCCCTTGTATCCGC +
Preference number: 6 (lower is better)
Translates to: AAGAGPRRWRPN*RERMAEPPCIR
Trigger: GCGGATACAAGGGGGCTCCGCCATCCGCTCCCGTCAGTTCGGCCTCCATCTCCTGGGACCCGCGCCGGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS GCA 72 bp CTGAAGGGATGGCCTCCGAGACCCCGGGCAGATCGCTaGCGCCGTGGACGAGTCCAGCCAGGGCTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: LKGWPPRPRADR*RRGRVQPGLWG
Trigger: GCCCCAGAGCCCTGGCTGGACTCGTCCACGGCGGCAGCGATCTGCCCGGGGTCTCGGAGGCCATCCCTTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS GCA 72 bp GGATGTGGCCACGACCGCCCCGCCGCCGCTCAGGTGTaGCCGATCTCACGTCTGCAAGTCGGCGGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: GCGHDRPAAAQV*PISRLQVGGAG
Trigger: TCCAGCCCCGCCGACTTGCAGACGTGAGATCGGGCACACCTGAGCGGCGGCGGGGCGGTCGTGGCCACATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 72 bp CGAGAGACTGGGCGGACTGGCTGGACTGGCAGACGCTaGCGGGACGGGGTGACTCAGGCACGTCGCCCCGGA +
Preference number: 6 (lower is better)
Translates to: RETGRTGWTGRR*RDGVTQARRPG
Trigger: TCCGGGGCGACGTGCCTGAGTCACCCCGTCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 72 bp ATGGCCTCCGAGACCCCGGGCAGATCGCTGCCGCCGTaGACGAGTCCAGCCAGGGCTCTGGGGCCACTCAGA +
Preference number: 6 (lower is better)
Translates to: MASETPGRSLPP*TSPARALGPLR
Trigger: TCTGAGTGGCCCCAGAGCCCTGGCTGGACTCGTCCACGGCGGCAGCGATCTGCCCGGGGTCTCGGAGGCCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp GTGACGGTGGCGAGCACAGGGCCGACTCTGAAGGGATaGCCTCCGAGACCCCGGGCAGATCGCTGCCGCCGT +
Preference number: 6 (lower is better)
Translates to: VTVASTGPTLKG*PPRPRADRCRR
Trigger: ACGGCGGCAGCGATCTGCCCGGGGTCTCGGAGGCCATCCCTTCAGAGTCGGCCCTGTGCTCGCCACCGTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp GTCTCGGACGCGAGAGACTGGGCGGACTGGCTGGACTaGCAGACGCTGGCGGGACGGGGTGACTCAGGCACG +
Preference number: 6 (lower is better)
Translates to: VSDARDWADWLD*QTLAGRGDSGT
Trigger: CGTGCCTGAGTCACCCCGTCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 72 bp GGCGAGTCTCGGACGCGAGAGACTGGGCGGACTGGCTaGACTGGCAGACGCTGGCGGGACGGGGTGACTCAG +
Preference number: 6 (lower is better)
Translates to: GESRTRETGRTG*TGRRWRDGVTQ
Trigger: CTGAGTCACCCCGTCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGACTCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 72 bp TGGAGGCGAGTCTCGGACGCGAGAGACTGGGCGGACTaGCTGGACTGGCAGACGCTGGCGGGACGGGGTGAC +
Preference number: 6 (lower is better)
Translates to: WRRVSDARDWAD*LDWQTLAGRGD
Trigger: GTCACCCCGTCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGACTCGCCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 72 bp GTGGGAGGCTGGAGGCGAGTCTCGGACGCGAGAGACTaGGCGGACTGGCTGGACTGGCAGACGCTGGCGGGA +
Preference number: 6 (lower is better)
Translates to: VGGWRRVSDARD*ADWLDWQTLAG
Trigger: TCCCGCCAGCGTCTGCCAGTCCAGCCAGTCCGCCCAGTCTCTCGCGTCCGAGACTCGCCTCCAGCCTCCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576980.2
ENST00000672140.1
CDS CCA 72 bp GTCCCAGGAGATGGAGGCCGAACTGACGGGAGCGGATaGCGGAGCCCCCTTGTATCCGCCGGGGAGCGACGA +
Preference number: 6 (lower is better)
Translates to: VPGDGGRTDGSG*RSPLVSAGERR
Trigger: TCGTCGCTCCCCGGCGGATACAAGGGGGCTCCGCCATCCGCTCCCGTCAGTTCGGCCTCCATCTCCTGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS TCA 72 bp GTCCCCGGCGAGCAGAGAAGTGCACCAGGCGGGGGCTaGCATCTACATCTGCGTGGAGCAGGGCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: VPGEQRSAPGGG*HLHLRGAGQLW
Trigger: CCACAGCTGCCCTGCTCCACGCAGATGTAGATGTCAGCCCCCGCCTGGTGCACTTCTCTGCTCGCCGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS GCA 72 bp TCGGGGTCGGGGAAGACAGAGTCTAGTCGGAAGCCGTaGTCGAGAGCCACCCGCAGCACCTCCTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SGSGKTESSRKP*SRATRSTSSRK
Trigger: CTTCCTGGAGGAGGTGCTGCGGGTGGCTCTCGAGCACGGCTTCCGACTAGACTCTGTCTTCCCCGACCCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp GGTTGGAGGCACAGGTGGAGCACACCCAGTAAGGTTTaGGGCTCACCCCGGCTACTTTGGTGGTGGATGGGG +
Preference number: 6 (lower is better)
Translates to: GWRHRWSTPSKV*GSPRLLWWWMG
Trigger: CCCCATCCACCACCAAAGTAGCCGGGGTGAGCCCCAAACCTTACTGGGTGTGCTCCACCTGTGCCTCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp GGTGGTCAGCGACACCCCTCTGTGGTCTTCAGACAGTaGGTTTCCGGAATCCAACCAGCAGGTGACGGTGGC +
Preference number: 6 (lower is better)
Translates to: GGQRHPSVVFRQ*VSGIQPAGDGG
Trigger: GCCACCGTCACCTGCTGGTTGGATTCCGGAAACCCACTGTCTGAAGACCACAGAGGGGTGTCGCTGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp TCGAAGCTGTCAGATTCGCTGGGTTGGAGGCACAGGTaGAGCACACCCAGTAAGGTTTGGGGCTCACCCCGG +
Preference number: 6 (lower is better)
Translates to: SKLSDSLGWRHR*STPSKVWGSPR
Trigger: CCGGGGTGAGCCCCAAACCTTACTGGGTGTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGACAGCTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp GGTGCCGGCCCTAAACATGGCCCCCAGCATAGAGTCTaGGAAGCGGGTCAGGGTCTCCAAAGTGGTGGAATA +
Preference number: 6 (lower is better)
Translates to: GAGPKHGPQHRV*EAGQGLQSGGI
Trigger: TATTCCACCACTTTGGAGACCCTGACCCGCTTCCCAGACTCTATGCTGGGGGCCATGTTTAGGGCCGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS TCA 72 bp ATCCTCAGTGCCGGACAAAGCGCAGAGACCTGGAGTTaGGCAGGTCTTCGGGGTCGGGGAAGACAGAGTCTA +
Preference number: 6 (lower is better)
Translates to: ILSAGQSAETWS*AGLRGRGRQSL
Trigger: TAGACTCTGTCTTCCCCGACCCCGAAGACCTGCTCAACTCCAGGTCTCTGCGCTTTGTCCGGCACTGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS GCA 72 bp ATCGGGCCCGCAAAGCACCTAGACACTCAGAGTCGGTaGAGAAAAGGTTGGCTCGGAAGGTGTCCACCTGGA +
Preference number: 6 (lower is better)
Translates to: IGPAKHLDTQSR*RKGWLGRCPPG
Trigger: TCCAGGTGGACACCTTCCGAGCCAACCTTTTCTGCACCGACTCTGAGTGTCTAGGTGCTTTGCGGGCCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp AGGGGAAGGGAGCTTGAGGTCTGGACGTATCCGATTTaGGGTGGTCAGCGACACCCCTCTGTGGTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: RGRELEVWTYPI*GGQRHPSVVFR
Trigger: TCTGAAGACCACAGAGGGGTGTCGCTGACCACCCCAAATCGGATACGTCCAGACCTCAAGCTCCCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp CGTATCCGATTTGGGGTGGTCAGCGACACCCCTCTGTaGTCTTCAGACAGTGGGTTTCCGGAATCCAACCAG +
Preference number: 6 (lower is better)
Translates to: RIRFGVVSDTPL*SSDSGFPESNQ
Trigger: CTGGTTGGATTCCGGAAACCCACTGTCTGAAGACCACAGAGGGGTGTCGCTGACCACCCCAAATCGGATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp AAGCACCTAGACACTCAGAGTCGGTGCAGAAAAGGTTaGCTCGGAAGGTGTCCACCTGGACGGAGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: KHLDTQSRCRKG*LGRCPPGRSSA
Trigger: AGCTGAGCTCCGTCCAGGTGGACACCTTCCGAGCCAACCTTTTCTGCACCGACTCTGAGTGTCTAGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp TGCAGAATTGGGTCGAAGCTGTCAGATTCGCTGGGTTaGAGGCACAGGTGGAGCACACCCAGTAAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: CRIGSKLSDSLG*RHRWSTPSKVW
Trigger: CCAAACCTTACTGGGTGTGCTCCACCTGTGCCTCCAACCCAGCGAATCTGACAGCTTCGACCCAATTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CCA 72 bp AAAGAAAAGGCAGAACTTCCTGGGTGTGTGCAGAATTaGGTCGAAGCTGTCAGATTCGCTGGGTTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: KEKAELPGCVQN*VEAVRFAGLEA
Trigger: TGCCTCCAACCCAGCGAATCTGACAGCTTCGACCCAATTCTGCACACACCCAGGAAGTTCTGCCTTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2
CDS CAA 72 bp AAAAGAAAAGGCAGAACTTCCTGGGTGTGTGCAGAATaGGGTCGAAGCTGTCAGATTCGCTGGGTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: KRKGRTSWVCAE*GRSCQIRWVGG
Trigger: GCCTCCAACCCAGCGAATCTGACAGCTTCGACCCAATTCTGCACACACCCAGGAAGTTCTGCCTTTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333751.8
ENST00000576980.2
ENST00000672140.1
ENST00000673447.2