RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCP (Homo sapiens)

Ensembl gene IDs: ENSG00000135253

Ensembl transcript IDs: ENST00000460528.1, ENST00000492679.5, ENST00000610776.4, ENST00000611280.4, ENST00000612224.1, ENST00000613019.4, ENST00000616669.4, ENST00000620378.1, ENST00000676619.1, ENST00000676717.1, ENST00000678812.1, ENST00000678888.1, ENST00000679229.1

Found 923 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCGGCGCGCAGGGTCGCTGGCATCTCGGCTCCGGCTCCGCGACCTaGGAGCCGCCGCCGGGCCGGGGGCTTCGGGCGGGTAAGCGCAGC +
Preference number: 1 (lower is better)
Translates to: LGAQGRWHLGSGSAT*EPPPGRGLRAGKRS
Trigger: GCTGCGCTTACCCGCCCGAAGCCCCCGGCCCGGCGGCGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCCGAG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp CGGCGGCGCTGCCGCCTGGCCGCGCTGTGCAGCTCCAGCAGCCGCTaGAGAGCCGTCACCTGCTGCGCCGCGCTTAAGCCCGCAGGCGCC +
Preference number: 1 (lower is better)
Translates to: RRRCRLAALCSSSSR*RAVTCCAALKPAGA
Trigger: GGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCAGCGGCTGCTGGAGCTGCACAGCGCGGCCAGGCGGCAGCGCCGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp TCCAGGACCCGGAGCCGCTGCTGCTCACGGTCCCGCCGGCGGCGCTaGCGCCTGGCCGCGCTGTGCAGCTCCAGCAGCCGCTGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: SRTRSRCCSRSRRRR*RLAALCSSSSRCRA
Trigger: GGCTCTGCAGCGGCTGCTGGAGCTGCACAGCGCGGCCAGGCGGCAGCGCCGCCGGCGGGACCGTGAGCAGCAGCGGCTCCGGGTCCTGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 90 bp CCCGGAGCCGCTGCTGCTCACGGTCCCGCCGGCGGCGCTGCCGCCTaGCCGCGCTGTGCAGCTCCAGCAGCCGCTGCAGAGCCGTCACCT +
Preference number: 1 (lower is better)
Translates to: PGAAAAHGPAGGAAA*PRCAAPAAAAEPSP
Trigger: AGGTGACGGCTCTGCAGCGGCTGCTGGAGCTGCACAGCGCGGCCAGGCGGCAGCGCCGCCGGCGGGACCGTGAGCAGCAGCGGCTCCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp GCCGCGCTGTGCAGCTCCAGCAGCCGCTGCAGAGCCGTCACCTGCTaGGCCGCGCTTAAGCCCGCAGGCGCCTTGGCGGTGCTGAGGGGC +
Preference number: 1 (lower is better)
Translates to: AALCSSSSRCRAVTC*AALKPAGALAVLRG
Trigger: GCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCAGCGGCTGCTGGAGCTGCACAGCGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR TCA 90 bp TCACCTGCTGCGCCGCGCTTAAGCCCGCAGGCGCCTTGGCGGTGCTaGGGGGCGCCGGCCACGCGGCCTTCAAGGCCTTGGGACGCTCAG +
Preference number: 1 (lower is better)
Translates to: SPAAPRLSPQAPWRC*GAPATRPSRPWDAQ
Trigger: CTGAGCGTCCCAAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp CTGGCCGCGCTGTGCAGCTCCAGCAGCCGCTGCAGAGCCGTCACCTaGTGCGCCGCGCTTAAGCCCGCAGGCGCCTTGGCGGTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: LAALCSSSSRCRAVT*CAALKPAGALAVLR
Trigger: CCTCAGCACCGCCAAGGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCAGCGGCTGCTGGAGCTGCACAGCGCGGCCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp AGCAGGACTTGGGGGCAGGCCTCGGGTGGGATGCAGTGGGCCTCATaGTCCACCAGGCCTGCAGGGCACTGGCAGCCGGGCACGCAGGGC +
Preference number: 1 (lower is better)
Translates to: SRTWGQASGGMQWAS*STRPAGHWQPGTQG
Trigger: GCCCTGCGTGCCCGGCTGCCAGTGCCCTGCAGGCCTGGTGGAGCATGAGGCCCACTGCATCCCACCCGAGGCCTGCCCCCAAGTCCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 90 bp GACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTaGCGATGTGGAGGCGTTCCAGGACCCGGAGCCGCTGCTGCTCAC +
Preference number: 1 (lower is better)
Translates to: DWAGAPRGEPGSGGS*RCGGVPGPGAAAAH
Trigger: GTGAGCAGCAGCGGCTCCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCCGCCCAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp CACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTaGCCGGCACGGATCCACCTCTCGGCCTGCAGAACAGGGCCGGCC +
Preference number: 1 (lower is better)
Translates to: HPTPGIGLTPGTVTC*PARIHLSACRTGPA
Trigger: GGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR GCA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTaGTGCCCGGCACGGATCCACCTCTCGGCCTGCAGAACAGGGCCG +
Preference number: 1 (lower is better)
Translates to: QHPTPGIGLTPGTVT*CPARIHLSACRTGP
Trigger: CGGCCCTGTTCTGCAGGCCGAGAGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 90 bp GGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCCTCTaGGGGCTGCACAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTG +
Preference number: 1 (lower is better)
Translates to: GPAGVPRMAMGVAFL*GLHSGLSGSHLPGL
Trigger: CAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACTGTGCAGCCCCCAGAGGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 90 bp ATGGGGAGGACTTCAGCACCCCACACCGGGCATTGGCCTCACGCCTaGCACGGTAACCTGCTGCCCGGCACGGATCCACCTCTCGGCCTG +
Preference number: 1 (lower is better)
Translates to: MGRTSAPHTGHWPHA*HGNLLPGTDPPLGL
Trigger: CAGGCCGAGAGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTGAAGTCCTCCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR GCA 90 bp CAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCCTCTGGGGGCTaGACAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATA +
Preference number: 1 (lower is better)
Translates to: QESLGWLWGSPSSGG*TVASPGATSQACEI
Trigger: TATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACTGTGCAGCCCCCAGAGGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 90 bp CCTGATGAACCCTTATCAGGCACTGTCCTGGCTCAGGGTGTCTCCTaGGGCTCCCGGCTGGGGCTGGGCCGAGCACCAAGTGGCTGGTCT +
Preference number: 1 (lower is better)
Translates to: PDEPLSGTVLAQGVS*GSRLGLGRAPSGWS
Trigger: AGACCAGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATAAGGGTTCATCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 90 bp CTCCCGGGCGGCCCCCAGCTTTGCCACCGCCGGTGCCGACCTTTGTaGCTCGCCTTTGATCATGCTCTGCGTCAGCGTGGTAGTCCTTCT +
Preference number: 1 (lower is better)
Translates to: LPGGPQLCHRRCRPL*LAFDHALRQRGSPS
Trigger: AGAAGGACTACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGGGGGCCGCCCGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR TCA 90 bp GGAGCAGCCCCTCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTaGAGTTCCCACAGAGCCCACAAGTCCGGCCCTGGTAGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: GAAPQGPADRPGQSH*SSHRAHKSGPGRSQ
Trigger: CTGGCTCCTACCAGGGCCGGACTTGTGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR TCA 90 bp AGGCGGCAAAGAAGGGCTCCGGTGGCACCACAGCATGGCAGCGACTaGATGGGGAGGACTTCAGCACCCCACACCGGGCATTGGCCTCAC +
Preference number: 1 (lower is better)
Translates to: RRQRRAPVAPQHGSD*MGRTSAPHTGHWPH
Trigger: GTGAGGCCAATGCCCGGTGTGGGGTGCTGAAGTCCTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACCGGAGCCCTTCTTTGCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 90 bp GGCAAAGAAGGGCTCCGGTGGCACCACAGCATGGCAGCGACTGAATaGGGAGGACTTCAGCACCCCACACCGGGCATTGGCCTCACGCCT +
Preference number: 1 (lower is better)
Translates to: GKEGLRWHHSMAATE*GGLQHPTPGIGLTP
Trigger: AGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTGAAGTCCTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACCGGAGCCCTTCTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 90 bp GGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATaGCTATGGGGGTCGCCTTCCTCTGGGGGCTGCACAGTGGCCTCT +
Preference number: 1 (lower is better)
Translates to: GFGVCAFRDPQESLG*LWGSPSSGGCTVAS
Trigger: AGAGGCCACTGTGCAGCCCCCAGAGGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp TCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTaGTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTC +
Preference number: 1 (lower is better)
Translates to: SPEVWALPAHRLWSL*FQGPAGVPRMAMGV
Trigger: GACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp GCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTaGGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTGGGCTCTCCCTG +
Preference number: 1 (lower is better)
Translates to: ATAGADLCGSPLIML*VSVVVLLRRFGLSL
Trigger: CAGGGAGAGCCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 90 bp TCATACACACAGGCGGCAAAGAAGGGCTCCGGTGGCACCACAGCATaGCAGCGACTGAATGGGGAGGACTTCAGCACCCCACACCGGGCA +
Preference number: 1 (lower is better)
Translates to: SYTQAAKKGSGGTTA*QRLNGEDFSTPHRA
Trigger: TGCCCGGTGTGGGGTGCTGAAGTCCTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACCGGAGCCCTTCTTTGCCGCCTGTGTGTATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR TCA 90 bp TGGGGGCTGCACAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTaGGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACT +
Preference number: 1 (lower is better)
Translates to: WGLHSGLSGSHLPGL*DIAFPRPQHLLPWT
Trigger: AGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACTGTGCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp GCACAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTaGCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGGAC +
Preference number: 1 (lower is better)
Translates to: AQWPLREPPPRLVRY*LPKTAASSSLDSGD
Trigger: GTCCCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTaGTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGC +
Preference number: 1 (lower is better)
Translates to: VQAGHSLHSPNQGGN*SPRGDSWPDEPLSG
Trigger: GCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
3UTR CCA 90 bp ACAGGCACACAGGTCATACACACAGGCGGCAAAGAAGGGCTCCGGTaGCACCACAGCATGGCAGCGACTGAATGGGGAGGACTTCAGCAC +
Preference number: 1 (lower is better)
Translates to: TGTQVIHTGGKEGLR*HHSMAATEWGGLQH
Trigger: GTGCTGAAGTCCTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACCGGAGCCCTTCTTTGCCGCCTGTGTGTATGACCTGTGTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 90 bp CATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTaGCCTGATGAACCCTTATCAGGCACTGTCCTGGCTCAGGGTGTC +
Preference number: 1 (lower is better)
Translates to: HSPNQGGNCSPRGDS*PDEPLSGTVLAQGV
Trigger: GACACCCTGAGCCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 90 bp TTTGATCATGCTCTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTaGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGA +
Preference number: 1 (lower is better)
Translates to: FDHALRQRGSPSPEV*ALPAHRLWSLCFQG
Trigger: TCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAGAGCATGATCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 90 bp GAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTaGGGACTCGCCTTTCCCTGGCACTTAGGACTAAATTCTCTTCGA +
Preference number: 1 (lower is better)
Translates to: EILPSQDRSIFFPGL*GLAFPWHLGLNSLR
Trigger: TCGAAGAGAATTTAGTCCTAAGTGCCAGGGAAAGGCGAGTCCCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR GCA 90 bp GCCCAGCCGCGTCCTCCTGTGGCGGGAGTTGAGCCGGACTGGGCGGGAGCCCCACCGAGGAGCCCCTGCTaGCCGGATACCTCGGCGCGC +
Preference number: 2 (lower is better)
Translates to: AQPRPPVAGVEPDWAGAPPRSPC*PDTSAR
Trigger: GCGCGCCGAGGTATCCGGGCAGCAGGGGCTCCTCGG...TGGGGCTCCCGCCCAGTCCGGCTCAACTCCCGCCACAGGAGGACGCGGCTGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CAA 90 bp TGCAGAGCCGTCACCTGCTGCGCCGCGCTTAAGCCCGCAGGCGCCTaGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: CRAVTCCAALKPAGA*AVLRGAGHAAFKAL
Trigger: CAAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR CCA 90 bp CCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGAGGCGCGCAGGGTCGCTaGCATCTCGGCTCCGGCTCC +
Preference number: 2 (lower is better)
Translates to: PRGEPGSGGSWRCGGVPGGAQGR*HLGSGS
Trigger: GGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCC...TCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR GCA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGATCCACCTCTCGGCCTaGAGAACAGGGCCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: QHPTPGIGLTPGTVTCCPIHLSA*RTGPAR
Trigger: CCTGGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGAT...CGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR-3UTR CCA 90 bp CCGGGCGGCCCCCAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTTCCCTCGGATGGCTATaGGGGTCGCCTTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PGGPQLCHRRCRPLWLAFSLGWL*GSPSSG
Trigger: CCCAGAGGAAGGCGACCCCCATAGCCATCCGAGGGA...AAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGGGGGCCGCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR GCA 90 bp GGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCAGCGGCACGGTAACCTGCTaGCCGGCACGGATCCACCTC +
Preference number: 2 (lower is better)
Translates to: GDRVGRTHQTRSHAPGGSGTVTC*PARIHL
Trigger: GAGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCC...GCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR-3UTR GCA 90 bp GTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCCTGGCACGGTAACCTaGTGCCCGGCACGGATCCAC +
Preference number: 2 (lower is better)
Translates to: VRGQGGPHSSNTKPRSRGPGTVT*CPARIH
Trigger: GTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGG...CCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR-3UTR CCA 90 bp GCCCAGCCGCGTCCTCCTGTGGCGGGAGTTGAGCCGGACTGGGCGGGAGCCCCACAGCATCTTCTTCCCTaGACTCTGGGGACTCGCCTT +
Preference number: 2 (lower is better)
Translates to: AQPRPPVAGVEPDWAGAPQHLLP*TLGTRL
Trigger: AAGGCGAGTCCCCAGAGTCCAGGGAAGAAGATGCTG...TGGGGCTCCCGCCCAGTCCGGCTCAACTCCCGCCACAGGAGGACGCGGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR CCA 90 bp GCCCAGCCGCGTCCTCCTGTGGCGGGAGTTGAGCCGGACTGGGCGGGAGCCCCACGGTGCCGACCTTTGTaGCTCGCCTTTGATCATGCT +
Preference number: 2 (lower is better)
Translates to: AQPRPPVAGVEPDWAGAPRCRPL*LAFDHA
Trigger: AGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCG...TGGGGCTCCCGCCCAGTCCGGCTCAACTCCCGCCACAGGAGGACGCGGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR GCA 90 bp ACTCCAGGGCCCTGCAGCCCGTGCGGATCGCGCTCCAGGCCTGGGGGCCCCGGAAGGCTTGTGAGATATTaGCTTCCCAAGACCGCAGCA +
Preference number: 2 (lower is better)
Translates to: TPGPCSPCGSRSRPGGPGRLVRY*LPKTAA
Trigger: TGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCT...TCCGGGGCCCCCAGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCCTGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR CCA 90 bp GTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCCTCTGGGGGCTGCACAGTaGCCTCTCCGGGAGCCACCT +
Preference number: 2 (lower is better)
Translates to: VLSGTRRSPSDGYGGRLPLGAAQ*PLREPP
Trigger: AGGTGGCTCCCGGAGAGGCCACTGTGCAGCCCCCAG...AGGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR GCA 90 bp CGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCCGGAGCCGCTGCAGGCTTTGGAGTCTGTaGTTTCAGGGACCCGCAGGA +
Preference number: 2 (lower is better)
Translates to: RQWRFLAMWRRSRTRSRCRLWSL*FQGPAG
Trigger: TCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCT...GCAGCGGCTCCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR GCA 90 bp TGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGACTTTGCCACCGCCGGTaGCGACCTTTGTGGCTCGCC +
Preference number: 2 (lower is better)
Translates to: CWEGRALLRRHGILSTRGLCHRR*RPLWLA
Trigger: GGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAG...TCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR TCA 90 bp GTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCCTGGGCAAAGCCATTaGAGTTCCCACAGAGCCCAC +
Preference number: 2 (lower is better)
Translates to: VRGQGGPHSSNTKPRSRGPGQSH*SSHRAH
Trigger: GTGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGG...CCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR-3UTR CCA 90 bp AGGGTGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGCCTTCTCCGGAGGTTTaGGCTCTCCCTGCCCACAGG +
Preference number: 2 (lower is better)
Translates to: RVLGRASTTSQARDPQHQPSPEV*ALPAHR
Trigger: CCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGG...CTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR TCA 90 bp CACTCCTGCCTGGCGACAGTGACTGGCGTAGGCTTCCAGGGCATCACAGAGGCAAGGCCACAGCCCCTCTaGGACCTGCCAGCTATTCCC +
Preference number: 2 (lower is better)
Translates to: HSCLATVTGVGFQGITEARPQPL*DLPAIP
Trigger: GGGAATAGCTGGCAGGTCTCAGAGGGGCTGTGGCCT...TGCCTCTGTGATGCCCTGGAAGCCTACGCCAGTCACTGTCGCCAGGCAGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR-3UTR GCA 90 bp GGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGCCTTCCTCTGGGGGCTaGACAGTGGCCTCTCCGGGA +
Preference number: 2 (lower is better)
Translates to: GFGVCAFRDPQESLGWLWPSSGG*TVASPG
Trigger: TCCCGGAGAGGCCACTGTGCAGCCCCCAGAGGAAGG...CCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR CCA 90 bp TCATCAAACACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGACGCTCACCTCCACCTaGGACTGCCCATCCCACAGC +
Preference number: 2 (lower is better)
Translates to: SSNTKPRSRGQPTTHSVGTLTST*DCPSHS
Trigger: GCTGTGGGATGGGCAGTCCCAGGTGGAGGTGAGCGT...CCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CAA 90 bp GCCCCCAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTaGATCATGCTCTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTT +
Preference number: 2 (lower is better)
Translates to: APSFATAGADLCGSP*IMLCVSVVVLLRRF
Trigger: AAACCTCCGGAGAAGGACTACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR GCA 90 bp GGCCTGATGAACCCTTATCAGGCACTGTCCTGGCTCAGGGTGTCTCCTGGGGCTAGGCCTCGGGTGGGATaGAGTGGGCCTCATGCTCCA +
Preference number: 2 (lower is better)
Translates to: GLMNPYQALSWLRVSPGARPRVG*SGPHAP
Trigger: TGGAGCATGAGGCCCACTGCATCCCACCCGAGGCCT...AGCCCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATAAGGGTTCATCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR-3UTR CCA 90 bp GTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCCTTTCTTCCCTGGACTCTaGGGACTCGCCTTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: VLSGTRRSPSDGYGGRLPFFPGL*GLAFPW
Trigger: CCAGGGAAAGGCGAGTCCCCAGAGTCCAGGGAAGAA...AGGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CAA 90 bp TGCACAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATaGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: CTVASPGATSQACEI*PSQDRSIFFPGLWG
Trigger: TCCCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR GCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCAACCAGGGTGGGAACTaGTCGCCAAGGGGAGACTCC +
Preference number: 2 (lower is better)
Translates to: TARQGETPGLMNPYQALSNQGGN*SPRGDS
Trigger: GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
3UTR-3UTR GCA 90 bp TCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTGAAGTTCCCACAGAGCCCAAACCAGGGTGGGAACTaGTCGCCAAGGGGAGACTCC +
Preference number: 2 (lower is better)
Translates to: SGPCRSSWAKPLKFPQSPNQGGN*SPRGDS
Trigger: GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT...TGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR-3UTR GCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGAACCAGGGTGGGAACTaGTCGCCAAGGGGAGACTCC +
Preference number: 2 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLNQGGN*SPRGDS
Trigger: GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
3UTR-3UTR GCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCGGTAGGTGTCACTCCTaGCTGGCGACAGTGACTGGC +
Preference number: 2 (lower is better)
Translates to: TARQGETPGLMNPYQALSGRCHS*LATVTG
Trigger: GCCAGTCACTGTCGCCAGGCAGGAGTGACACCTACC...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR-3UTR CCA 90 bp GGGGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGCCAAGGGGAGACTCCTaGCCTGATGAACCCTTATCA +
Preference number: 2 (lower is better)
Translates to: GAQAPVSRQGILSIALTRPRGDS*PDEPLS
Trigger: TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGG...CCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
3UTR-3UTR CCA 90 bp TTCGCAGGCACGGGATCCTCAGCACCAGGGGAACACAGTAGTTCCAGGAAGTTCCAGGAGTCCCTCGGATaGCTATGGGGGTCGCCTTCC +
Preference number: 2 (lower is better)
Translates to: FAGTGSSAPGEHSSSRKFQESLG*LWGSPS
Trigger: GGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTG...GAACTTCCTGGAACTACTGTGTTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR TCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCAGAGTTTACTGCTGGTaGCTCAACATGGCGGGGGTC +
Preference number: 2 (lower is better)
Translates to: TARQGETPGLMNPYQALSRVYCW*LNMAGV
Trigger: GACCCCCGCCATGTTGAGTCACCAGCAGTAAACTCT...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
3UTR GCA 72 bp CGGAGGGCACCCGGAAGCCAAGCCTGGCCCACCTCCTaGTCCCCCGGTGCGGGGCCCACTCCAGGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: RRAPGSQAWPTS*SPGAGPTPGPC
Trigger: GCAGGGCCCTGGAGTGGGCCCCGCACCGGGGGAGCAGGAGGTGGGCCAGGCTTGGCTTCCGGGTGCCCTCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR TCA 72 bp GCGCCGCGCTTAAGCCCGCAGGCGCCTTGGCGGTGCTaGGGGGCGCCGGCCACGCGGCCTTCAAGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: APRLSPQAPWRC*GAPATRPSRPW
Trigger: CCAAGGCCTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTTAAGCGCGGCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 72 bp AGGGCCCGCAGCCGCTCCGTCCTCTCCCGATGCATTTaGTCCAGCTGCTCCCGCAGGGCGCGCCGCCGCCCA +
Preference number: 3 (lower is better)
Translates to: RARSRSVLSRCI*SSCSRRARRRP
Trigger: TGGGCGGCGGCGCGCCCTGCGGGAGCAGCTGGAGCAAATGCATCGGGAGAGGACGGAGCGGCTGCGGGCCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 72 bp CAGCCGCGTCCTCCTGTGGCGGGAGTTGAGCCGGACTaGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: QPRPPVAGVEPD*AGAPRGEPGSG
Trigger: GCCACTGCCGGGTTCACCCCGTGGGGCTCCCGCCCAGTCCGGCTCAACTCCCGCCACAGGAGGACGCGGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 72 bp TGCAGCTCCAGCAGCCGCTGCAGAGCCGTCACCTGCTaGGCCGCGCTTAAGCCCGCAGGCGCCTTGGCGGTG +
Preference number: 3 (lower is better)
Translates to: CSSSSRCRAVTC*AALKPAGALAV
Trigger: CACCGCCAAGGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCAGCGGCTGCTGGAGCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 72 bp GGCTCCCGGCTGGGGCTGGGCCGAGCACCAAGTGGCTaGTCTCCAGTGAGCAGGACTTGGGGGCAGGCCTCG +
Preference number: 3 (lower is better)
Translates to: GSRLGLGRAPSG*SPVSRTWGQAS
Trigger: CGAGGCCTGCCCCCAAGTCCTGCTCACTGGAGACCAGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 72 bp GGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTaGCGATGTGGAGGCGTTCCAGGACCCGGAGCCGCT +
Preference number: 3 (lower is better)
Translates to: GAPRGEPGSGGS*RCGGVPGPGAA
Trigger: AGCGGCTCCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR CAA 90 bp ACTCCAGGGCCCTGCAGCCCGTGCGGATCGCGCTCCAGGCCTGGGGGCCCCGGACTTTGTGGCTCGCCTTaGATCATGCTCTGCGTCAGC +
Preference number: 3 (lower is better)
Translates to: TPGPCSPCGSRSRPGGPGLCGSP*IMLCVS
Trigger: GCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAG...TCCGGGGCCCCCAGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCCTGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 72 bp CTCGGATGGCTATGGGGGTCGCCTTCCTCTGGGGGCTaGACAGTGGCCTCTCCGGGAGCCACCTCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: LGWLWGSPSSGG*TVASPGATSQA
Trigger: AGCCTGGGAGGTGGCTCCCGGAGAGGCCACTGTGCAGCCCCCAGAGGAAGGCGACCCCCATAGCCATCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR-3UTR CAA 90 bp CGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCCGGAGCCGCTGCCGCCGGTGCCGACCTTaGTGGCTCGCCTTTGATCAT +
Preference number: 3 (lower is better)
Translates to: RQWRFLAMWRRSRTRSRCRRCRP*WLAFDH
Trigger: ATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCG...GCAGCGGCTCCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 72 bp CCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTaGCCGGCACGGATCCACCTCTCGGCCTGCAGAACA +
Preference number: 3 (lower is better)
Translates to: PGIGLTPGTVTC*PARIHLSACRT
Trigger: TGTTCTGCAGGCCGAGAGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR GCA 72 bp ACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTaGTGCCCGGCACGGATCCACCTCTCGGCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: TPGIGLTPGTVT*CPARIHLSACR
Trigger: TCTGCAGGCCGAGAGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR GCA 72 bp CTGGCAGCCGGGCACGCAGGGCCTCACGCAGTGGGCTaGCAGCTCCCCCAGGGGGATATGCTGATTGAAGCA +
Preference number: 3 (lower is better)
Translates to: LAAGHAGPHAVG*QLPQGDMLIEA
Trigger: TGCTTCAATCAGCATATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGGCCCTGCGTGCCCGGCTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 72 bp CCCTTATCAGGCACTGTCCTGGCTCAGGGTGTCTCCTaGGGCTCCCGGCTGGGGCTGGGCCGAGCACCAAGT +
Preference number: 3 (lower is better)
Translates to: PLSGTVLAQGVS*GSRLGLGRAPS
Trigger: ACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 72 bp ACTTCAGCACCCCACACCGGGCATTGGCCTCACGCCTaGCACGGTAACCTGCTGCCCGGCACGGATCCACCT +
Preference number: 3 (lower is better)
Translates to: TSAPHTGHWPHA*HGNLLPGTDPP
Trigger: AGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 72 bp GGGCTCCGGTGGCACCACAGCATGGCAGCGACTGAATaGGGAGGACTTCAGCACCCCACACCGGGCATTGGC +
Preference number: 3 (lower is better)
Translates to: GLRWHHSMAATE*GGLQHPTPGIG
Trigger: GCCAATGCCCGGTGTGGGGTGCTGAAGTCCTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACCGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 72 bp CGGGCAGGCCTAGAGTTTACTGCTGGTGACTCAACATaGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: RAGLEFTAGDST*RGSLQGRGPGS
Trigger: GGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTCTAGGCCTGCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
3UTR CCA 72 bp GTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATaGCTATGGGGGTCGCCTTCCTCTGGGGGCTGCACA +
Preference number: 3 (lower is better)
Translates to: VCAFRDPQESLG*LWGSPSSGGCT
Trigger: TGTGCAGCCCCCAGAGGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 72 bp GGCCCCCAGCTTTGCCACCGCCGGTGCCGACCTTTGTaGCTCGCCTTTGATCATGCTCTGCGTCAGCGTGGT +
Preference number: 3 (lower is better)
Translates to: GPQLCHRRCRPL*LAFDHALRQRG
Trigger: ACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGGGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR TCA 72 bp AGAAGGGCTCCGGTGGCACCACAGCATGGCAGCGACTaGATGGGGAGGACTTCAGCACCCCACACCGGGCAT +
Preference number: 3 (lower is better)
Translates to: RRAPVAPQHGSD*MGRTSAPHTGH
Trigger: ATGCCCGGTGTGGGGTGCTGAAGTCCTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACCGGAGCCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR TCA 72 bp CCTCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTaGAGTTCCCACAGAGCCCACAAGTCCGGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: PQGPADRPGQSH*SSHRAHKSGPG
Trigger: ACCAGGGCCGGACTTGTGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR CCA 72 bp GCTCTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTaGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGC +
Preference number: 3 (lower is better)
Translates to: ALRQRGSPSPEV*ALPAHRLWSLC
Trigger: GCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 72 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTaGTCGCCAAGGGGAGACTCCTGGCCTGATGAACCC +
Preference number: 3 (lower is better)
Translates to: GHSLHSPNQGGN*SPRGDSWPDEP
Trigger: GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
3UTR CCA 72 bp CAGGTCATACACACAGGCGGCAAAGAAGGGCTCCGGTaGCACCACAGCATGGCAGCGACTGAATGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: QVIHTGGKEGLR*HHSMAATEWGG
Trigger: TCCTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACCGGAGCCCTTCTTTGCCGCCTGTGTGTATGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR GCA 72 bp CCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTaGCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAC +
Preference number: 3 (lower is better)
Translates to: PLREPPPRLVRY*LPKTAASSSLD
Trigger: GTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR GCA 72 bp GGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTaGGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: GADLCGSPLIML*VSVVVLLRRFG
Trigger: CCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 72 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTaGCCTGATGAACCCTTATCAGGCACTGTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: NQGGNCSPRGDS*PDEPLSGTVLA
Trigger: AGCCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
3UTR TCA 72 bp CACAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTaGGATATTGCCTTCCCAAGACCGCAGCATCTTCTT +
Preference number: 3 (lower is better)
Translates to: HSGLSGSHLPGL*DIAFPRPQHLL
Trigger: AAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CCA 72 bp CCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTaGGGACTCGCCTTTCCCTGGCACTTAGGACTAAAT +
Preference number: 3 (lower is better)
Translates to: PSQDRSIFFPGL*GLAFPWHLGLN
Trigger: ATTTAGTCCTAAGTGCCAGGGAAAGGCGAGTCCCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp ACTCCAGGGCCCTGCAGCCCGTGCGGATCGCGCTCCAGGCCTGGGGGCCCCGGATCCTGTGGCGGGAGTTaGGCCGGACTGGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: TPGPCSPCGSRSRPGGPGSCGGS*AGLGGS
Trigger: GCTCCCGCCCAGTCCGGCTCAACTCCCGCCACAGGA...TCCGGGGCCCCCAGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCCTGGAGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp AAGCCCGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGGCGGCCCCCAGCTTTaGCACCGCCGGTGCCGACCT +
Preference number: 4 (lower is better)
Translates to: KPAGALAVLRGAGHAAFKGGPQL*HRRCRP
Trigger: AGGTCGGCACCGGCGGTGGCAAAGCTGGGGGCCGCC...CTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp AAGCCCGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGGGCAGCTCCAGCCCTaGGGGATACCCGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KPAGALAVLRGAGHAAFKGQLQP*GIPAAL
Trigger: GAGGGCCGCGGGTATCCCCCAGGGCTGGAGCTGCCC...CTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CAA 72 bp GTCACCTGCTGCGCCGCGCTTAAGCCCGCAGGCGCCTaGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VTCCAALKPAGA*AVLRGAGHAAF
Trigger: GAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp AAGCCCGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGGGTGCCCATCCACCGTaGCTGCCCCGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KPAGALAVLRGAGHAAFKGAHPP*LPRPAA
Trigger: TGCTGCAGGACGGGGCAGTCACGGTGGATGGGCACC...CTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp CCGGGCGGCCCCCAGCTTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTTGGGAGCCCCACGGGGTaGACCCGGCAGTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PGGPQLCHRRCRPLWLAFGSPTG*TRQWRF
Trigger: GAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCC...AAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGGGGGCCGCCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp CCCGGCACGGATCCACCTCTCGGCCTGCAGAACAGGGCCGGCCAGGCCACAGCCGGGCAGGGGCGAGGCTaGCAGTGGGCATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGTDPPLGLQNRAGQATAGQGRG*QWAWPS
Trigger: GGAAGGCCATGCCCACTGCCAGCCTCGCCCCTGCCC...GGCTGTGGCCTGGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGATCCGTGCCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp GAGTTGAGCCGGACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTGGCGCGCAGGGTCGCTaGCATCTCGGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: ELSRTGREPHGVNPAVAVGAQGR*HLGSGS
Trigger: GGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCC...AACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCCGCCCAGTCCGGCTCAACTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp ACTCCAGGGCCCTGCAGCCCGTGCGGATCGCGCTCCAGGCCTGGGGGCCCCGGACGGCTCCACTCCATCTaGAGCAGTACAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TPGPCSPCGSRSRPGGPGRLHSI*SSTGGS
Trigger: GCTGCCCCCTGTACTGCTGCAGATGGAGTGGAGCCG...TCCGGGGCCCCCAGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCCTGGAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp ACTCCAGGGCCCTGCAGCCCGTGCGGATCGCGCTCCAGGCCTGGGGGCCCCGGACCTTCTCCGGAGGTTTaGGCTCTCCCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: TPGPCSPCGSRSRPGGPGPSPEV*ALPAHR
Trigger: CCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGG...TCCGGGGCCCCCAGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCCTGGAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp AGCAGCCGCTGCAGAGCCGTCACCTGCTGCGCCGCGCTTAAGCCCGCAGGCGCCCTTTGCCACCGCCGGTaGCGACCTTTGTGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: SSRCRAVTCCAALKPAGALCHRR*RPLWLA
Trigger: GGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAG...GGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCAGCGGCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GCTGCCCGGCACGGATCCACCTCTCGGCCTGCAGAACAGGGCCGGCCAGGCCACGAACACGAGGGCCCCTaGCACTGCACGGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: AARHGSTSRPAEQGRPGHEHEGP*HCTAPV
Trigger: GACAGGAGCCGTGCAGTGCCAGGGGCCCTCGTGTTC...GTGGCCTGGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGATCCGTGCCGGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCCGGAGCCGCTGCAGTTCTGGGTGTTCCTaGCCCCGAGGGCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RQWRFLAMWRRSRTRSRCSSGCS*PRGPAA
Trigger: GGCTGCGGGCCCTCGGGGCCAGGAACACCCAGAACT...GCAGCGGCTCCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GCTGCCCGGCACGGATCCACCTCTCGGCCTGCAGAACAGGGCCGGCCAGGCCACTACAGCAGCGGCTCCTaGAGGAAGGGCAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: AARHGSTSRPAEQGRPGHYSSGS*RKGKAT
Trigger: GGTGGCCTTGCCCTTCCTGCAGGAGCCGCTGCTGTA...GTGGCCTGGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGATCCGTGCCGGGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp GCTGCCCGGCACGGATCCACCTCTCGGCCTGCAGAACAGGGCCGGCCAGGCCACAGCCCGGGCTGGGCGTaGAGGATCACAGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: AARHGSTSRPAEQGRPGHSPGWA*RITVCP
Trigger: AGGACACACTGTGATCCTGCACGCCCAGCCCGGGCT...GTGGCCTGGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGATCCGTGCCGGGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp GCTGCCCGGCACGGATCCACCTCTCGGCCTGCAGAACAGGGCCGGCCAGGCCACAGCCCCTCAGGGCCCTaGAGATCGTCCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AARHGSTSRPAEQGRPGHSPSGP*RSSWAK
Trigger: CTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCT...GTGGCCTGGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGATCCGTGCCGGGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp TGGGGCTCCCGGCTGGGGCTGGGCCGAGCACCAAGTGGCTGGTCTCCAGTGAGCTCTGGCAACGCACGGTaGCCGCCATGCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: WGSRLGLGRAPSGWSPVSSGNAR*PPCRSS
Trigger: GCTGCTCCTGCATGGCGGGCACCGTGCGTTGCCAGA...GCTCACTGGAGACCAGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCAGGGGTCTCCGAAGGCCATaGAGGAAGCGGGCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: RSHAPGGSLPHTAWGLARGLRRP*RKRAEA
Trigger: TGCCTCGGCCCGCTTCCTGCATGGCCTTCGGAGACC...CCTGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp TCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAGTCAGGCTCCCAGCGTaGCCCCTCGGGCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: STWRGSLQGRGPGSSVQAVRLPA*PLGPGT
Trigger: CGTGCCTGGCCCGAGGGGGCACGCTGGGAGCCTGAC...TGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp TGGGGCTCCCGGCTGGGGCTGGGCCGAGCACCAAGTGGCTGGTCTCCAGTGAGCGGAAGGGGTGGGCACTaGAGCCGCACACAGCTGACC +
Preference number: 4 (lower is better)
Translates to: WGSRLGLGRAPSGWSPVSGRGGH*SRTQLT
Trigger: GGTCAGCTGTGTGCGGCTGCAGTGCCCACCCCTTCC...GCTCACTGGAGACCAGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp AGTCCCTCGGATGGCTATGGGGGTCGCCTTCCTCTGGGGGCTGCACAGTGGCCTCGCCTGGCCGCGCTGTaGAGCTCCAGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SPSDGYGGRLPLGAAQWPRLAAL*SSSSRC
Trigger: GCAGCGGCTGCTGGAGCTGCACAGCGCGGCCAGGCG...AGGCCACTGTGCAGCCCCCAGAGGAAGGCGACCCCCATAGCCATCCGAGGGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp CACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCATGGGAGGGGCCGGGCTaGGTATGGACACAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HEATLQGAAYHTQRGASPWEGPG*VWTQAG
Trigger: GCCAGCCTGTGTCCATACCCAGCCCGGCCCCTCCCA...TGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp TGGGGCTCCCGGCTGGGGCTGGGCCGAGCACCAAGTGGCTGGTCTCCAGTGAGCCACCTGGGGCAACACTaGCCTGGTCCACTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WGSRLGLGRAPSGWSPVSHLGQH*PGPLWG
Trigger: GCCCCAGAGTGGACCAGGCCAGTGTTGCCCCAGGTG...GCTCACTGGAGACCAGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAGGGCAGCAGTGGGCGATaGGAAGCGCTCCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: QHGGGLCRAGAQAPVSRQGSSGR*EALPAG
Trigger: GCCAGCGGGGAGCGCTTCCCATCGCCCACTGCTGCC...CTGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGCCCAGAGGGGATGAGTaGGTGGCTGCAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QHPTPGIGLTPGTVTCCPPRGDE*VAAARR
Trigger: CCTCCGGGCTGCAGCCACCCACTCATCCCCTCTGGG...CGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGCAGTCATGGGGCCCTTaGCGGGGCTGGGCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: QHPTPGIGLTPGTVTCCPQSWGP*RGWAQE
Trigger: CTCTTGCGCCCAGCCCCGCCAAGGGCCCCATGACTG...CGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp ACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGAGGCCTGCAGGGCACTaGCAGCCGGGCACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TQHGGGLCRAGAQAPVSRRPAGH*QPGTQG
Trigger: GCCCTGCGTGCCCGGCTGCCAGTGCCCTGCAGGCCT...CCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAGGCTCCCGGCTGGGGCTaGGCCGAGCACCAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: QHGGGLCRAGAQAPVSRQAPGWG*AEHQVA
Trigger: AGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGC...CTGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp AGCCGCTGCAGAGCCGTCACCTGCTGCGCCGCGCTTAAGCCCGCAGGCGCCTTGAGCCGCGTCCTCCTGTaGCGGGAGTTGAGCCGGACT +
Preference number: 4 (lower is better)
Translates to: SRCRAVTCCAALKPAGALSRVLL*RELSRT
Trigger: AGTCCGGCTCAACTCCCGCCACAGGAGGACGCGGCT...CAAGGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCAGCGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp CGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCAGGGGATGCGTGCACAGGTaGCGACGCCCTCGTGACACA +
Preference number: 4 (lower is better)
Translates to: RSHAPGGSLPHTAWGLARGCVHR*RRPRDT
Trigger: TGTGTCACGAGGGCGTCGTCACCTGTGCACGCATCC...CCTGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGGCACGGATTGGGCAGTTGTCTGCTaGCCAGGGGGCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HTGHWPHAWHGNLLPGTDWAVVC*PGGSLG
Trigger: CCCCAGGGAGCCCCCTGGGCAGCAGACAACTGCCCA...ATCCGTGCCGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp ACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCAGCGCAGGGGGTGCCACTaGTCCTGGGAGTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TKPRSRGQPTTHSVGPRQRRGCH*SWEFPA
Trigger: TGCTGGGAACTCCCAGGAGCAGTGGCACCCCCTGCG...CTGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAGCCACAGGCTCCCCGCTaGGGTGCTCCCGCCCGTTTA +
Preference number: 4 (lower is better)
Translates to: QHGGGLCRAGAQAPVSRQPQAPR*GAPARL
Trigger: TAAACGGGCGGGAGCACCGCAGCGGGGAGCCTGTGG...CTGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGGAGGGCCCCTGGCACTaGACGGCTCCTGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: QHPTPGIGLTPGTVTCCPEGPWH*TAPVRQ
Trigger: CTGTCTGACAGGAGCCGTGCAGTGCCAGGGGCCCTC...CGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCGGGCCCTGCAGCCCGTaGGGATCGCGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LCFQGPAGVPRMAMGVAFGPCSP*GSRSRP
Trigger: AGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCC...GAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp CCTTGGGACGCTCAGGGCCGCCCCACCCGACCCCGGAGGGCACCCGGAAGCCAAGCAATGACCAGAGGGTaGTGGGAAGGGCGAGCACTA +
Preference number: 4 (lower is better)
Translates to: PWDAQGRPTRPRRAPGSQAMTRG*WEGRAL
Trigger: TAGTGCTCGCCCTTCCCAGCACCCTCTGGTCATTGC...TTGGCTTCCGGGTGCCCTCCGGGGTCGGGTGGGGCGGCCCTGAGCGTCCCAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GAGTTGAGCCGGACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTACGCTCACCTCCACCTaGGACTGCCCATCCCACAGC +
Preference number: 4 (lower is better)
Translates to: ELSRTGREPHGVNPAVAVTLTST*DCPSHS
Trigger: GCTGTGGGATGGGCAGTCCCAGGTGGAGGTGAGCGT...AACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCCGCCCAGTCCGGCTCAACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp ACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCAGAGCGGTGAGCAGCGCTaGCTCTGGCAACGCACGGTG +
Preference number: 4 (lower is better)
Translates to: TKPRSRGQPTTHSVGPRQSGEQR*LWQRTV
Trigger: CACCGTGCGTTGCCAGAGCCAGCGCTGCTCACCGCT...CTGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCAGGGCCTGGCACAGGTCGTaGGAGGGCAGTCAACCAAGG +
Preference number: 4 (lower is better)
Translates to: RSHAPGGSLPHTAWGLARAWHRS*EGSQPR
Trigger: CCTTGGTTGACTGCCCTCCCACGACCTGTGCCAGGC...CCTGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCACAGCAGGACAGGCTCTaGACAGGGCAGCGGCACGCA +
Preference number: 4 (lower is better)
Translates to: HEATLQGAAYHTQRGASPQQDRL*TGQRHA
Trigger: TGCGTGCCGCTGCCCTGTCCAGAGCCTGTCCTGCTG...TGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGGGGAGAAGTACTCCTaGTGGCGGGCGTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LLVTQHGGGLCRAGAQAPGEKYS*WRAWAA
Trigger: CGCGGCCCACGCCCGCCACCAGGAGTACTTCTCCCC...TGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCCGGAGCCGCTGCAGTTCTGCTCTCTCCTaGCCCAGGTGCGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: RQWRFLAMWRRSRTRSRCSSALS*PRCGSE
Trigger: CTCGGACCCGCACCTGGGCCAGGAGAGAGCAGAACT...GCAGCGGCTCCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp AGCCGCTGCAGAGCCGTCACCTGCTGCGCCGCGCTTAAGCCCGCAGGCGCCTTGGTGCTACCACCTGGCTaGCAGCACTGGCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: SRCRAVTCCAALKPAGALVLPPG*QHWLHA
Trigger: AGCATGGAGCCAGTGCTGTCAGCCAGGTGGTAGCAC...CAAGGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCAGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp CACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCACAACTGCCCTGGAAGTaGAGCAGGCGGCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: HEATLQGAAYHTQRGASPQLPWK*SRRPSK
Trigger: CTTCGACGGCCGCCTGCTGCACTTCCAGGGCAGTTG...TGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp TCAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCCAGGTTGGGCAGCAGTaGCCAGGCCTCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: SAPHTGHWPHAWHGNLLPQVGQQ*PGLSTG
Trigger: GCCAGTGCTGAGGCCTGGGCACTGCTGCCCAACCTG...GGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp TCAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGGCTCCCCGCTGCGGTaGTCCCGCCCGTTTAGGAAA +
Preference number: 4 (lower is better)
Translates to: SAPHTGHWPHAWHGNLLPGSPLR*SRPFRK
Trigger: TTTCCTAAACGGGCGGGAGCACCGCAGCGGGGAGCC...GGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGCAAAGGCACAGCCGCTaGAGTCGTTCGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QHPTPGIGLTPGTVTCCPQRHSR*SRSGSR
Trigger: CCTGCTGCCCGAACGACTGCAGCGGCTGTGCCTTTG...CGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp ACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCAGAGGCCTCGGGTGGGATaGAGTGGGCCTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: TKPRSRGQPTTHSVGPRQRPRVG*SGPHAP
Trigger: TGGAGCATGAGGCCCACTGCATCCCACCCGAGGCCT...CTGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCCTTCCTCTGGGGGCTaGACAGTGGCCTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: HGVNPAVAVPGDVEAFQDPSSGG*TVASPG
Trigger: TCCCGGAGAGGCCACTGTGCAGCCCCCAGAGGAAGG...GTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCCTCACAGGAGCTGCTCCTaGGCCCGCCGGCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: VLSGTRRSPSDGYGGRLPHRSCS*ARRLHS
Trigger: GGAGTGGAGCCGGCGGGCCCAGGAGCAGCTCCTGTG...AGGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GAGTTGAGCCGGACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCATGCTTGCTGGGCCTaGCCCCTCGGACCGAAAAAC +
Preference number: 4 (lower is better)
Translates to: ELSRTGREPHGVNPAVAVHACWA*PLGPKN
Trigger: GTTTTTCGGTCCGAGGGGCCAGGCCCAGCAAGCATG...AACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCCGCCCAGTCCGGCTCAACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp TGGGGCTCCCGGCTGGGGCTGGGCCGAGCACCAAGTGGCTGGTCTCCAGTGAGCCTGAAGTCCCCGCTGTaGCAGTCCTTGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: WGSRLGLGRAPSGWSPVSLKSPL*QSLAST
Trigger: TGTGCTGGCCAAGGACTGCCACAGCGGGGACTTCAG...GCTCACTGGAGACCAGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp ACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGGTCCACTCTGGGGCCTaGCACAGGTCGTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TQHGGGLCRAGAQAPVSRVHSGA*HRSWEG
Trigger: GCCCTCCCACGACCTGTGCCAGGCCCCAGAGTGGAC...CCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCAGCGGCTGGCAGTGGGCATaGCCTTCCTGGCATCGGCAC +
Preference number: 4 (lower is better)
Translates to: GDRVGRTHQTRSHAPGGSGWQWA*PSWHRH
Trigger: GTGCCGATGCCAGGAAGGCCATGCCCACTGCCAGCC...GCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCGGCCTTCAAGGCCTTaGGACGCTCAGGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LRQRGSPSPEVWALPAHRRPSRP*DAQGRP
Trigger: GGGGCGGCCCTGAGCGTCCCAAGGCCTTGAAGGCCG...CCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp CCACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACGGTTCCTGGCGATGTaGAGGCGTTCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: PRGEPGSGGSWRCGGVPGRFLAM*RRSRTR
Trigger: CCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCG...TCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGAAGGAGTTGAGCCGGACTaGGCGGGAGCCCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: AGKGEHYFAGTGSSAPGEGVEPD*AGAPRG
Trigger: ACCCCGTGGGGCTCCCGCCCAGTCCGGCTCAACTCC...TTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp AAGCCCGCAGGCGCCTTGGCGGTGCTGAGGGGCGCCGGCCACGCGGCCTTCAAGATGACCAGAGGGTGCTaGGAAGGGCGAGCACTACTT +
Preference number: 4 (lower is better)
Translates to: KPAGALAVLRGAGHAAFKMTRGC*EGRALL
Trigger: AAGTAGTGCTCGCCCTTCCCAGCACCCTCTGGTCAT...CTTGAAGGCCGCGTGGCCGGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCGCTTGGGGGCCACAGTaGGCGGCCCCATCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPAWGPQ*AAPSWQ
Trigger: CTGCCAGGATGGGGCCGCTCACTGTGGCCCCCAAGC...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTGGACACTGCCGCCGGTaGCAGCGAAGGCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLLVTQHGGGLCRAGAQAGHCRR*QRRLGG
Trigger: GCCTCCCAGCCTTCGCTGTCACCGGCGGCAGTGTCC...AGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp CCTTGGGACGCTCAGGGCCGCCCCACCCGACCCCGGAGGGCACCCGGAAGCCAACACCTCCCAGGCTTGTaGGATATTGCCTTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PWDAQGRPTRPRRAPGSQHLPGL*DIAFPR
Trigger: TCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTG...TTGGCTTCCGGGTGCCCTCCGGGGTCGGGTGGGGCGGCCCTGAGCGTCCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp TGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGAGGCAAGGCCACCGGGTaGCCATCCACCGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: CWEGRALLRRHGILSTRGGKATG*PSTVTA
Trigger: GGCAGTCACGGTGGATGGGCACCCGGTGGCCTTGCC...TCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GAGTTGAGCCGGACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCGGCCCTCTTGCACCTaGCAGCTATTCCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: ELSRTGREPHGVNPAVAVRPSCT*QLFPNA
Trigger: TGCGTTTGGGAATAGCTGGCAGGTGCAAGAGGGCCG...AACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCCGCCCAGTCCGGCTCAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GGCAGGAGCAGCCCCTCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTGAAGGGCAGACGCAGGCTGTaGAGGCGTCAGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRSSPSGPCRSSWAKPLKGRRRL*RRQAPS
Trigger: GCTGGGAGCCTGACGCCTGCACAGCCTGCGTCTGCC...CTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCTGCTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp ACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCAGGGCACTTCAGGGCCATaGAGCGAACTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TKPRSRGQPTTHSVGPRQGTSGP*SELGSS
Trigger: TGAGGAGCCGAGTTCGCTGCATGGCCCTGAAGTGCC...CTGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp TCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAGGCACGGTAACCTGCTaGCCGGCACGGATCCACCTC +
Preference number: 4 (lower is better)
Translates to: STWRGSLQGRGPGSSVQAGTVTC*PARIHL
Trigger: GAGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCC...TGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp ACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCAGGGTAGGTGTCACTCCTaGCTGGCGACAGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: TKPRSRGQPTTHSVGPRQGRCHS*LATVTG
Trigger: GCCAGTCACTGTCGCCAGGCAGGAGTGACACCTACC...CTGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTTCAGGCCCACTCCAGGGCCCTaGAGCCCGTGCGGATCGCGC +
Preference number: 4 (lower is better)
Translates to: LRRFGLSLPTGFGVCAFRPTPGP*SPCGSR
Trigger: GCGCGATCCGCACGGGCTGCAGGGCCCTGGAGTGGG...CCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp AGCCGCTGCAGAGCCGTCACCTGCTGCGCCGCGCTTAAGCCCGCAGGCGCCTTGTCCGTCCTCTCCCGATaGATTTGCTCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRCRAVTCCAALKPAGALSVLSR*ICSSCS
Trigger: GGAGCAGCTGGAGCAAATGCATCGGGAGAGGACGGA...CAAGGCGCCTGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCAGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp AGGGTGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGAGCACCGCCACCTCCTaGGTCCAGGCCACACCGCTC +
Preference number: 4 (lower is better)
Translates to: RVLGRASTTSQARDPQHQSTATS*VQATPL
Trigger: GAGCGGTGTGGCCTGGACCCAGGAGGTGGCGGTGCT...CTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp CGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCCGGAGCCGCTGCACCTGTGCTACCACCTaGCTGACAGCACTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RQWRFLAMWRRSRTRSRCTCATT*LTALAP
Trigger: TGGAGCCAGTGCTGTCAGCCAGGTGGTAGCACAGGT...GCAGCGGCTCCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCATCCCACAGCACCTaGAGCCCGGGCTGGGCGTGC +
Preference number: 4 (lower is better)
Translates to: ALPAHRLWSLCFQGPAGVPSHST*SPGWAC
Trigger: GCACGCCCAGCCCGGGCTCCAGGTGCTGTGGGATGG...GACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGGGGTGCCACTGCTCCTaGGAGTTCCCAGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: QHPTPGIGLTPGTVTCCPGCHCS*EFPART
Trigger: AGTCCTTGCTGGGAACTCCCAGGAGCAGTGGCACCC...CGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp GTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCCCAGGGATCTTGCCTaGGTGTCTGCAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VRGQGGPHSSNTKPRSRGPRDLA*VSAGHW
Trigger: CCAGTGCCCTGCAGACACCCAGGCAAGATCCCTGGG...CCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCGAGAAGTACTCCTGGTaGCGGGCGTGGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPEKYSW*RAWAAP
Trigger: CGGCGCGGCCCACGCCCGCCACCAGGAGTACTTCTC...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGGGGAGAAGTACTCCTaGTGGCGGGCGTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPGEKYS*WRAWAA
Trigger: CGCGGCCCACGCCCGCCACCAGGAGTACTTCTCCCC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGGCAGGGCAGCCGCTaGCAGGACACGGAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRGQGSR*QDTEPS
Trigger: CGACGGCTCCGTGTCCTGCCAGCGGCTGCCCTGCCC...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAGGGCAGGGCAGCCGCTaGCAGGACACGGAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEGQGSR*QDTEPS
Trigger: CGACGGCTCCGTGTCCTGCCAGCGGCTGCCCTGCCC...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGGGCAGGGCAGCCGCTaGCAGGACACGGAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEGQGSR*QDTEPS
Trigger: CGACGGCTCCGTGTCCTGCCAGCGGCTGCCCTGCCC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCACAGGGGCACATGCCTTaGGCTCGCAGCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: LLVTQHGGGLCRAGAQAPQGHMP*ARSSRC
Trigger: GCAGCGTGAGCTGCGAGCCCAAGGCATGTGCCCCTG...TGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGCGCATGGAACCTTCCTaGCAGGTGCAGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QHPTPGIGLTPGTVTCCPRMEPS*QVQREQ
Trigger: CTGCTCCCTCTGCACCTGCCAGGAAGGTTCCATGCG...CGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp TTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTGGCAGCCCACCAGGCTaGGACACTGCCGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLLVTQHGGGLCRAGAQAGSPPG*DTAAGD
Trigger: GTCACCGGCGGCAGTGTCCCAGCCTGGTGGGCTGCC...AGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CCTCACGCAGTGGGCTGCCAGCTCCCCCAGGGGGATATGCTGATTGAAGCAGGTGGCAGCCCACCAGGCTaGGACACTGCCGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: PHAVGCQLPQGDMLIEAGGSPPG*DTAAGD
Trigger: GTCACCGGCGGCAGTGTCCCAGCCTGGTGGGCTGCC...ACCTGCTTCAATCAGCATATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGAGGCCTGCAGGGCACTaGCAGCCGGGCACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWRPAGH*QPGTQG
Trigger: GCCCTGCGTGCCCGGCTGCCAGTGCCCTGCAGGCCT...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACAGGCCTGCAGGGCACTaGCAGCCGGGCACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDRPAGH*QPGTQG
Trigger: GCCCTGCGTGCCCGGCTGCCAGTGCCCTGCAGGCCT...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCAGCTCGGGTGGGATGCAGTaGGCCTCATGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GDRVGRTHQTRSHAPGGSSGGMQ*ASCSTR
Trigger: CCTGGTGGAGCATGAGGCCCACTGCATCCCACCCGA...GCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGACCTGGGGCTCCCGGCTaGGGCTGGGCCGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGPGAPG*GWAEHQ
Trigger: TTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCAGG...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCTGGGGCTCCCGGCTaGGGCTGGGCCGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEPGAPG*GWAEHQ
Trigger: TTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCAGG...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGCTCAGGGTGTCTCCTaGGGCTCCCGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPAQGVS*GSRLGL
Trigger: CAGCCCCAGCCGGGAGCCCCAGGAGACACCCTGAGC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
3UTR CAA 72 bp GGCGGCCCCCAGCTTTGCCACCGCCGGTGCCGACCTTaGTGGCTCGCCTTTGATCATGCTCTGCGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: GGPQLCHRRCRP*WLAFDHALRQR
Trigger: ACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAAGCTGGGGGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGGTGCCCATCCACCGTaGCTGCCCCGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPGAHPP*LPRPAA
Trigger: TGCTGCAGGACGGGGCAGTCACGGTGGATGGGCACC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGGCTTGGGGGCCACAGTaGGCGGCCCCATCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWAWGPQ*AAPSWQ
Trigger: CTGCCAGGATGGGGCCGCTCACTGTGGCCCCCAAGC...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TGGGGCTCCCGGCTGGGGCTGGGCCGAGCACCAAGTGGCTGGTCTCCAGTGAGCAGCTGGACAGGAAGGTaGCCCCCTCCTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: WGSRLGLGRAPSGWSPVSSWTGR*PPPHKA
Trigger: AGCTTTATGAGGAGGGGGTCACCTTCCTGTCCAGCT...GCTCACTGGAGACCAGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR TCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTGGCGGCACTGGATGTaGCCCTCCAGGCACCGGCAG +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPWRHWM*PSRHRQ
Trigger: CTGCCGGTGCCTGGAGGGTCACATCCAGTGCCGCCA...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTTGGCGGCACTGGATGTaGCCCTCCAGGCACCGGCAG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPWRHWM*PSRHRQ
Trigger: CTGCCGGTGCCTGGAGGGTCACATCCAGTGCCGCCA...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCAGTGCCCAGAGGGGATaGGTGGGTGGCTGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPSAQRG*VGGCSP
Trigger: CGGGCTGCAGCCACCCACTCATCCCCTCTGGGCACT...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp ACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGTGGTGCTCCCGGCCCTaGGAGAGACAGCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: TQHGGGLCRAGAQAPVSRWCSRP*ERQLWQ
Trigger: TTGCCACAGCTGTCTCTCTCAGGGCCGGGAGCACCA...CCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp AGGTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGTGGTGCTCCCGGCCCTaGGAGAGACAGCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RCGDRVGRTHQTRSHAPGWCSRP*ERQLWQ
Trigger: TTGCCACAGCTGTCTCTCTCAGGGCCGGGAGCACCA...CCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR TCA 90 bp GCAGGGCCTCACGCAGTGGGCTGCCAGCTCCCCCAGGGGGATATGCTGATTGAAAGCTCCCCCGCTCGGTaGCCTGGAGCTTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: AGPHAVGCQLPQGDMLIESSPAR*PGACRE
Trigger: TTCCCTGCAAGCTCCAGGTCACCGAGCGGGGGAGCT...TTCAATCAGCATATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR TCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGGACACTGCCGCCGGTaGCAGCGAAGGCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEGHCRR*QRRLGG
Trigger: GCCTCCCAGCCTTCGCTGTCACCGGCGGCAGTGTCC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAAGGCCACAGCCCCTCTaGGACCTGCCAGCTATTCCC +
Preference number: 4 (lower is better)
Translates to: STWRGSLQGRGPGSSVQARPQPL*DLPAIP
Trigger: GGGAATAGCTGGCAGGTCTCAGAGGGGCTGTGGCCT...TGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp ACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGAGCCCCTCAGGGCCCTaGAGATCGTCCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TQHGGGLCRAGAQAPVSRSPSGP*RSSWAK
Trigger: CTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCT...CCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp GGGGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGGTCTCCGAAGGCCATaGAGGAAGCGGGCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GAQAPVSRQGILSIALTRGLRRP*RKRAEA
Trigger: TGCCTCGGCCCGCTTCCTGCATGGCCTTCGGAGACC...CCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp AGGTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGCACTCTCGCAGGGGGTaGCACTGCTCCTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RCGDRVGRTHQTRSHAPGHSRRG*HCSWEF
Trigger: GAACTCCCAGGAGCAGTGGCACCCCCTGCGAGAGTG...CCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGTCAGGCTCCCAGCGTaGCCCCTCGGGCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLVRLPA*PLGPGT
Trigger: CGTGCCTGGCCCGAGGGGGCACGCTGGGAGCCTGAC...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCAGGGCCTCACGCAGTGGGCTGCCAGCTCCCCCAGGGGGATATGCTGATTGAATCTTGCCTGGGTGTCTaGAGGGCACTGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGPHAVGCQLPQGDMLIESCLGV*RALAGR
Trigger: CCTGCCCGCCAGTGCCCTGCAGACACCCAGGCAAGA...TTCAATCAGCATATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp AGGTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGAGGGAAGGGGCACAGTaGAGGGGCACATGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RCGDRVGRTHQTRSHAPGREGAQ*RGTCLG
Trigger: CCCAAGGCATGTGCCCCTGCACTGTGCCCCTTCCCT...CCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCCTCGCCAGGGACACCACTCACAGCTaGCTGCTGGTCCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: RSHAPGGSLPHTAWGLARDTTHS*LLVPQT
Trigger: AGTTTGAGGGACCAGCAGGCAGCTGTGAGTGGTGTC...CCTGGCGAGGCCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp GGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCAGCGATGCACTGGATGCGTaGACAGGTGACGACGCCCTC +
Preference number: 4 (lower is better)
Translates to: GDRVGRTHQTRSHAPGGSDALDA*TGDDAL
Trigger: GAGGGCGTCGTCACCTGTGCACGCATCCAGTGCATC...GCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp GCAGGGCCTCACGCAGTGGGCTGCCAGCTCCCCCAGGGGGATATGCTGATTGAAGGCACGGTAACCTGCTaGCCGGCACGGATCCACCTC +
Preference number: 4 (lower is better)
Translates to: AGPHAVGCQLPQGDMLIEGTVTC*PARIHL
Trigger: GAGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCC...TTCAATCAGCATATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp GGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCAGCAACCAGGGTGGGAACTaGTCGCCAAGGGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: GDRVGRTHQTRSHAPGGSNQGGN*SPRGDS
Trigger: GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT...GCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTGCGTCAGCGTGGTAGTAGGACCCGGAGCCGCTaGTGCTCACGGTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RCRPLWLAFDHALRQRGSRTRSR*CSRSRR
Trigger: CCGGCGGGACCGTGAGCAGCAGCGGCTCCGGGTCCT...ACTACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp CCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGGGGCAGGAGAGGGCCTaGCACTCCTCGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PGSSVQAGHSLHSPNQGGGQERA*HSSRWH
Trigger: GTGCCACCTCGAGGAGTGCCAGGCCCTCTCCTGCCC...CCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGCCACCTCACGGCCCTaGTGCACGCAGGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: GPGSSVQAGHSLHSPNQGATSRP*CTQDWV
Trigger: CACCCAGTCCTGCGTGCACCAGGGCCGTGAGGTGGC...ACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGGAGCAGCGCTGGCTCTaGCAACGCACGGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWEQRWL*QRTVPA
Trigger: GGCGGGCACCGTGCGTTGCCAGAGCCAGCGCTGCTC...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAGAGCAGCGCTGGCTCTaGCAACGCACGGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEEQRWL*QRTVPA
Trigger: GGCGGGCACCGTGCGTTGCCAGAGCCAGCGCTGCTC...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGACCATCCCACAGCACCTaGAGCCCGGGCTGGGCGTGC +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGPSHST*SPGWAC
Trigger: GCACGCCCAGCCCGGGCTCCAGGTGCTGTGGGATGG...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGGTGGTGCAGGCATCTaGGGAGAAGGTCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: SAPHTGHWPHAWHGNLLPGGAGI*GEGLPV
Trigger: AACGGGGAGACCTTCTCCCCAGATGCCTGCACCACC...GGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp GGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTCCCAGGCCTCAGCACTaGCTCTGGGCAGGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: GPGSSVQAGHSLHSPNQGPRPQH*LWAGAR
Trigger: CCTAGCCCCTGCCCAGAGCCAGTGCTGAGGCCTGGG...ACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CACTCCTGCCTGGCGACAGTGACTGGCGTAGGCTTCCAGGGCATCACAGAGGCACCCAGGCCTCAGCACTaGCTCTGGGCAGGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: HSCLATVTGVGFQGITEAPRPQH*LWAGAR
Trigger: CCTAGCCCCTGCCCAGAGCCAGTGCTGAGGCCTGGG...TGCCTCTGTGATGCCCTGGAAGCCTACGCCAGTCACTGTCGCCAGGCAGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGTCCACTCTGGGGCCTaGCACAGGTCGTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPVHSGA*HRSWEG
Trigger: GCCCTCCCACGACCTGTGCCAGGCCCCAGAGTGGAC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCAGCCTCCAGGATGCAGTCTaGGCACCTGGGGCAACACTG +
Preference number: 4 (lower is better)
Translates to: GDRVGRTHQTRSHAPGGSLQDAV*APGATL
Trigger: CAGTGTTGCCCCAGGTGCCCAGACTGCATCCTGGAG...GCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp TCAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGGAAGTCCGCTCCGCTaGGGTACTCTTTCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: SAPHTGHWPHAWHGNLLPGSPLR*GTLSRQ
Trigger: TTGGCGGGAAAGAGTACCCCAGCGGAGCGGACTTCC...GGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGAGAAGTACTCCTGGTaGCGGGCGTGGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEEKYSW*RAWAAP
Trigger: CGGCGCGGCCCACGCCCGCCACCAGGAGTACTTCTC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGGCAGCAGTGGGCGATaGGAAGCGCTCCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPGSSGR*EALPAG
Trigger: GCCAGCGGGGAGCGCTTCCCATCGCCCACTGCTGCC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGGCAGCAGTCGCCCCTaGCAGGGAAGGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPGSSRP*QGRGTV
Trigger: CACTGTGCCCCTTCCCTGCCAGGGGCGACTGCTGCC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGGAGAGCTGGGGGACATaGCTTCTTCTGGCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: QHPTPGIGLTPGTVTCCPESWGT*LLLAAH
Trigger: ATGCGCTGCCAGAAGAAGCCATGTCCCCCAGCTCTC...CGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGGCAGCCCACCAGGCTaGGACACTGCCGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGGSPPG*DTAAGD
Trigger: GTCACCGGCGGCAGTGTCCCAGCCTGGTGGGCTGCC...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCATGGCACTCCTCGAGGTaGCACTCCACATGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: LLVTQHGGGLCRAGAQAPWHSSR*HSTWPR
Trigger: TCGGGGCCATGTGGAGTGCCACCTCGAGGAGTGCCA...TGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCCCCCACACCGGGCATTaGCCTCACGCCTGGCACGGT +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPPHTGH*PHAWHG
Trigger: ACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGG...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACCAGGGCCTCACGCAGTaGGCTGCCAGCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDQGLTQ*AASSPR
Trigger: CCTGGGGGAGCTGGCAGCCCACTGCGTGAGGCCCTG...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAACCTGGGGCTCCCGGCTaGGGCTGGGCCGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQPGAPG*GWAEHQ
Trigger: TTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCAGG...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGCTCAGGGTGTCTCCTaGGGCTCCCGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEAQGVS*GSRLGL
Trigger: CAGCCCCAGCCGGGAGCCCCAGGAGACACCCTGAGC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCAGCCGGGCCGGCAGATaGGGCAGCACTCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARSRAGR*GSTPQV
Trigger: CACCTGGGGAGTGCTGCCCCATCTGCCGGCCCGGCT...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAAGCCGGGCCGGCAGATaGGGCAGCACTCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDESRAGR*GSTPQV
Trigger: CACCTGGGGAGTGCTGCCCCATCTGCCGGCCCGGCT...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCTGGGGGCTGCACAGTaGCCTCTCCGGGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: ALPAHRLWSLCFQGPAGVLGAAQ*PLREPP
Trigger: AGGTGGCTCCCGGAGAGGCCACTGTGCAGCCCCCAG...GACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGTGCCCATCCACCGTaGCTGCCCCGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGGAHPP*LPRPAA
Trigger: TGCTGCAGGACGGGGCAGTCACGGTGGATGGGCACC...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCGCCACACGAGAGCGGTaGGCAGCGCTGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARATRER*AALALA
Trigger: TGCCAGAGCCAGCGCTGCTCACCGCTCTCGTGTGGC...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCGCTTGGGGGCCACAGTaGGCGGCCCCATCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSAWGPQ*AAPSWQ
Trigger: CTGCCAGGATGGGGCCGCTCACTGTGGCCCCCAAGC...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGTGGCGGCACTGGATGTaGCCCTCCAGGCACCGGCAG +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGWRHWM*PSRHRQ
Trigger: CTGCCGGTGCCTGGAGGGTCACATCCAGTGCCGCCA...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGGCAGGGCACAGGGGGTaGCTGGGCACTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWAGHRG*LGTPAP
Trigger: AGGAGCAGGAGTGCCCAGTCACCCCCTGTGCCCTGC...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACGCAGGGCACAGGGGGTaGCTGGGCACTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDAGHRG*LGTPAP
Trigger: AGGAGCAGGAGTGCCCAGTCACCCCCTGTGCCCTGC...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGTGCCCAGAGGGGATaGGTGGGTGGCTGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPSAQRG*VGGCSP
Trigger: CGGGCTGCAGCCACCCACTCATCCCCTCTGGGCACT...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGTGACTGCCCCGTCCTaGAGCAGCCGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGVTAPS*SSRTAM
Trigger: CATGGCCGTGCGGCTGCTGCAGGACGGGGCAGTCAC...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GAGTTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCAAGGCCACCGGGTaGCCATCCACCGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: EFTAGDSTWRGSLQGRGPGKATG*PSTVTA
Trigger: GGCAGTCACGGTGGATGGGCACCCGGTGGCCTTGCC...TGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp GCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGAAAGCCCGGGCTGGGCGTaGAGGATCACAGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: AGKGEHYFAGTGSSAPGESPGWA*RITVCP
Trigger: AGGACACACTGTGATCCTGCACGCCCAGCCCGGGCT...TTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp CTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCACAGCACTGGCTCCATaGTTGCTGGGCCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LCFQGPAGVPRMAMGVAFTALAP*LLGLAP
Trigger: AGGGGCCAGGCCCAGCAAGCATGGAGCCAGTGCTGT...GAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp AGGGTGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGCAGGGTCCCCACCTGTaGTACCACCTGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: RVLGRASTTSQARDPQHQQGPHL*YHLADS
Trigger: GCTGTCAGCCAGGTGGTAGCACAGGTGGGGACCCTG...CTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGCCAGGGCCCCGAGGTaGAGGAGAAGGGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPARAPR*RRRDSA
Trigger: TGCGCTGTCCCTTCTCCTGCACCTCGGGGCCCTGGC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGTCAGGCTCCCAGCGTaGCCCCTCGGGCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPVRLPA*PLGPGT
Trigger: CGTGCCTGGCCCGAGGGGGCACGCTGGGAGCCTGAC...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGGCAGACGCAGGCTGTaGAGGCGTCAGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPGRRRL*RRQAPS
Trigger: GCTGGGAGCCTGACGCCTGCACAGCCTGCGTCTGCC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGCCACAGGCTCCCCGCTaGGGTGCTCCCGCCCGTTTA +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGPQAPR*GAPARL
Trigger: TAAACGGGCGGGAGCACCGCAGCGGGGAGCCTGTGG...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCAGGAGCAGCCCCTCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTGAAGCAGACAGGGCAGCACTaGCCAGGGATCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRSSPSGPCRSSWAKPLKQTGQH*PGILPG
Trigger: CCCAGGCAAGATCCCTGGGCAGTGCTGCCCTGTCTG...CTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCTGCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp TCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAGTGACTGGGCACTCCTaGTCCTCACAGGAGACCTCG +
Preference number: 4 (lower is better)
Translates to: STWRGSLQGRGPGSSVQAVTGHS*SSQETS
Trigger: CGAGGTCTCCTGTGAGGAGCAGGAGTGCCCAGTCAC...TGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp TTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTGGAAGGGGTGGGCACTaGAGCCGCACACAGCTGACC +
Preference number: 4 (lower is better)
Translates to: LLLVTQHGGGLCRAGAQAGRGGH*SRTQLT
Trigger: GGTCAGCTGTGTGCGGCTGCAGTGCCCACCCCTTCC...AGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGCCAGGCAGCCTCTaGAGCGAGGGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGEPGSL*SEGSSS
Trigger: GGAGCTGCTGCCCTCGCTGCAGAGGCTGCCTGGCTC...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACGAGCCAGGCAGCCTCTaGAGCGAGGGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDEPGSL*SEGSSS
Trigger: GGAGCTGCTGCCCTCGCTGCAGAGGCTGCCTGGCTC...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCGGCCCCGATGGCAGGTaGAGGCGATGCACGCATTGC +
Preference number: 4 (lower is better)
Translates to: FTAGDSTWRGSLQGRGPGGPDGR*RRCTHC
Trigger: GCAATGCGTGCATCGCCTGCACCTGCCATCGGGGCC...GCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCCCTGGCACGGTAACCTaGTGCCCGGCACGGATCCAC +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPPGTVT*CPARIH
Trigger: GTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGG...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAGGTAGGTGTCACTCCTaGCTGGCGACAGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: STWRGSLQGRGPGSSVQAGRCHS*LATVTG
Trigger: GCCAGTCACTGTCGCCAGGCAGGAGTGACACCTACC...TGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACCCTCACGCAGTGGGCTaGCAGCTCCCCCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDPHAVG*QLPQGD
Trigger: ATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGG...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCCTCACGCAGTGGGCTaGCAGCTCCCCCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARPHAVG*QLPQGD
Trigger: ATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGG...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGTGGGCCAGGTCCGGCTaGTCAGGGTCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GFGVCAFRDPQESLGWLWWARSG*SGSPPV
Trigger: CACAGGTGGGGACCCTGAGCAGCCGGACCTGGCCCA...CCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCTGCAGAGCCGTCACCTaGTGCGCCGCGCTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: ALPAHRLWSLCFQGPAGVCRAVT*CAALKP
Trigger: GGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCTGCA...GACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGTGCATTTGCTCCAGCTaGTCCCGCAGGGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GFGVCAFRDPQESLGWLWCICSS*SRRARR
Trigger: GCGGCGCGCCCTGCGGGAGCAGCTGGAGCAAATGCA...CCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCAGCACCGCCACCTCCTaGGTCCAGGCCACACCGCTC +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARSTATS*VQATPL
Trigger: GAGCGGTGTGGCCTGGACCCAGGAGGTGGCGGTGCT...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCCAGCAGCTGTCAGCCTaGGGCACCTTCGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPQQLSA*GTFAQP
Trigger: TGGCTGGGCGAAGGTGCCCCAGGCTGACAGCTGCTG...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGCCACCTCACGGCCCTaGTGCACGCAGGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGATSRP*CTQDWV
Trigger: CACCCAGTCCTGCGTGCACCAGGGCCGTGAGGTGGC...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGAGCAGCGCTGGCTCTaGCAACGCACGGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTEQRWL*QRTVPA
Trigger: GGCGGGCACCGTGCGTTGCCAGAGCCAGCGCTGCTC...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGCCATCCCACAGCACCTaGAGCCCGGGCTGGGCGTGC +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLPSHST*SPGWAC
Trigger: GCACGCCCAGCCCGGGCTCCAGGTGCTGTGGGATGG...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGATGGGAGGGGCCGGGCTaGGTATGGACACAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGWEGPG*VWTQAG
Trigger: GCCAGCCTGTGTCCATACCCAGCCCGGCCCCTCCCA...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGGCACAGGGGGTGACTaGGCACTCCTGCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: GAQAPVSRQGILSIALTRGTGGD*ALLLLT
Trigger: TGTGAGGAGCAGGAGTGCCCAGTCACCCCCTGTGCC...CCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGTCCACTCTGGGGCCTaGCACAGGTCGTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPVHSGA*HRSWEG
Trigger: GCCCTCCCACGACCTGTGCCAGGCCCCAGAGTGGAC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTTGGCCTGGTCCACTCTaGGGCCTGGCACAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: GPGSSVQAGHSLHSPNQGWPGPL*GLAQVV
Trigger: CACGACCTGTGCCAGGCCCCAGAGTGGACCAGGCCA...ACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCATGGCATCGGCACTCCTaGCAGGGGTCTCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPWHRHS*QGSRGW
Trigger: CCACCCCCGAGACCCCTGCCAGGAGTGCCGATGCCA...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCAGGAGCAGCCCCTCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTGAAGTGGGCATGGCCTTCCTaGCATCGGCACTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GRSSPSGPCRSSWAKPLKWAWPS*HRHSWQ
Trigger: CTGCCAGGAGTGCCGATGCCAGGAAGGCCATGCCCA...CTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCTGCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCGGCTGGCAGTGGGCATaGCCTTCCTGGCATCGGCAC +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPGWQWA*PSWHRH
Trigger: GTGCCGATGCCAGGAAGGCCATGCCCACTGCCAGCC...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAGGGCAGGGGCGAGGCTaGCAGTGGGCATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLGQGRG*QWAWPS
Trigger: GGAAGGCCATGCCCACTGCCAGCCTCGCCCCTGCCC...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGAGAAGTACTCCTGGTaGCGGGCGTGGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSEKYSW*RAWAAP
Trigger: CGGCGCGGCCCACGCCCGCCACCAGGAGTACTTCTC...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGGTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGCAAACTCCTTCCCCTaGTACAGGCAGCCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: RCGDRVGRTHQTRSHAPGANSFP*YRQPSQ
Trigger: CTGCGACGGCTGCCTGTACCAGGGGAAGGAGTTTGC...CCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCGGCAGCAGTGGGCGATaGGAAGCGCTCCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSGSSGR*EALPAG
Trigger: GCCAGCGGGGAGCGCTTCCCATCGCCCACTGCTGCC...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGGTGGCAGGCAGCAGTaGGCGATGGGAAGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPGGRQQ*AMGSAP
Trigger: GGGAGCGCTTCCCATCGCCCACTGCTGCCTGCCACC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCCTGATGAACCCTTATCAGGCACTGTCCTGGCTCAGGGTGTCTCCTGGGGCTGGTGGCAGGCAGCAGTaGGCGATGGGAAGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GLMNPYQALSWLRVSPGAGGRQQ*AMGSAP
Trigger: GGGAGCGCTTCCCATCGCCCACTGCTGCCTGCCACC...AGCCCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATAAGGGTTCATCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGTGGCAGGCAGCAGTaGGCGATGGGAAGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGGGRQQ*AMGSAP
Trigger: GGGAGCGCTTCCCATCGCCCACTGCTGCCTGCCACC...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGAGGGGATGAGTGGGTaGCTGCAGCCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GPGSSVQAGHSLHSPNQGEGMSG*LQPGGS
Trigger: TGAGCCTCCGGGCTGCAGCCACCCACTCATCCCCTC...ACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGGAGGGGATGAGTGGGTaGCTGCAGCCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: AALIKHEATLQGAAYHTQEGMSG*LQPGGS
Trigger: TGAGCCTCCGGGCTGCAGCCACCCACTCATCCCCTC...CTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACCCCAGAGGGGATGAGTaGGTGGCTGCAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDPRGDE*VAAARR
Trigger: CCTCCGGGCTGCAGCCACCCACTCATCCCCTCTGGG...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCCACAGGCACACAGGTCATACACACAGGCGGCAAAGAAGGGCTCCGGTGGCACCCCGCTCGGTGACCTaGAGCTTGCAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GHRHTGHTHRRQRRAPVAPRSVT*SLQGRG
Trigger: ACCCCTTCCCTGCAAGCTCCAGGTCACCGAGCGGGG...TGCCACCGGAGCCCTTCTTTGCCGCCTGTGTGTATGACCTGTGTGCCTGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGGGCCCTTGGCGGGGCTaGGCGCAAGAGCTGATGCAC +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWGPWRG*AQELMH
Trigger: GTGCATCAGCTCTTGCGCCCAGCCCCGCCAAGGGCC...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAGGGTCTGCCCCAGGCTaGAAGCTCTCCCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEGSAPG*KLSPGS
Trigger: CGAGCCTGGGGAGAGCTTCCAGCCTGGGGCAGACCC...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGGGTCTGCCCCAGGCTaGAAGCTCTCCCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEGSAPG*KLSPGS
Trigger: CGAGCCTGGGGAGAGCTTCCAGCCTGGGGCAGACCC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCCACAGGCACACAGGTCATACACACAGGCGGCAAAGAAGGGCTCCGGTGGCACTCCCAGGGGGAGTGTaGCGCTCTGAGAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GHRHTGHTHRRQRRAPVALPGGV*RSERGQ
Trigger: CTGTCCCCTCTCAGAGCGCCACACTCCCCCTGGGAG...TGCCACCGGAGCCCTTCTTTGCCGCCTGTGTGTATGACCTGTGTGCCTGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp TCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAGGTGGCACCACAGCATaGCAGCGACTGAATGGGGAG +
Preference number: 4 (lower is better)
Translates to: STWRGSLQGRGPGSSVQAGGTTA*QRLNGE
Trigger: CTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACC...TGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCAGGGCCTCACGCAGTaGGCTGCCAGCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETQGLTQ*AASSPR
Trigger: CCTGGGGGAGCTGGCAGCCCACTGCGTGAGGCCCTG...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACGGGGCAGGCCTCGGGTaGGATGCAGTGGGCCTCATG +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDGAGLG*DAVGLM
Trigger: CATGAGGCCCACTGCATCCCACCCGAGGCCTGCCCC...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTGAAGTTCCCACAGAGCCCAGCTCCCGGCTGGGGCTaGGCCGAGCACCAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SGPCRSSWAKPLKFPQSPAPGWG*AEHQVA
Trigger: AGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGC...TGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTGCTCCCGGCTGGGGCTaGGCCGAGCACCAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETAPGWG*AEHQVA
Trigger: AGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGC...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTGCTCAGGGTGTCTCCTaGGGCTCCCGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PVSRQGILSIALTRVGTAAQGVS*GSRLGL
Trigger: CAGCCCCAGCCGGGAGCCCCAGGAGACACCCTGAGC...AGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GCAGGGCCTCACGCAGTGGGCTGCCAGCTCCCCCAGGGGGATATGCTGATTGAAGCAGCACTCCCCAGGTaGGGTGCAGCTCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: AGPHAVGCQLPQGDMLIEAALPR*GAALQA
Trigger: TGCTTGGAGAGCTGCACCCCACCTGGGGAGTGCTGC...TTCAATCAGCATATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGGCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCACGCAGGACTGGGTaGGAGCCCGGCATACGGGGC +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSARRTG*EPGIRG
Trigger: GCCCCGTATGCCGGGCTCCCACCCAGTCCTGCGTGC...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGCACGCAGGACTGGGTaGGAGCCCGGCATACGGGGC +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQARRTG*EPGIRG
Trigger: GCCCCGTATGCCGGGCTCCCACCCAGTCCTGCGTGC...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCGCCACACGAGAGCGGTaGGCAGCGCTGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSATRER*AALALA
Trigger: TGCCAGAGCCAGCGCTGCTCACCGCTCTCGTGTGGC...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGCCACACGAGAGCGGTaGGCAGCGCTGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTATRER*AALALA
Trigger: TGCCAGAGCCAGCGCTGCTCACCGCTCTCGTGTGGC...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGGTTCCCAGCAAGGACTaGGGAATGGGCAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: VRGQGGPHSSNTKPRSRGVPSKD*GMGSCL
Trigger: CAGACAACTGCCCATTCCTCAGTCCTTGCTGGGAAC...CCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR TCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGGCAGGGCACAGGGGGTaGCTGGGCACTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALAGHRG*LGTPAP
Trigger: AGGAGCAGGAGTGCCCAGTCACCCCCTGTGCCCTGC...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAAGTGCCCAGAGGGGATaGGTGGGTGGCTGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQSAQRG*VGGCSP
Trigger: CGGGCTGCAGCCACCCACTCATCCCCTCTGGGCACT...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGAGCTCCCCCGCTCGGTaGCCTGGAGCTTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGSSPAR*PGACRE
Trigger: TTCCCTGCAAGCTCCAGGTCACCGAGCGGGGGAGCT...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGCTGGGCGCAAGAGCTaGTGCACTGGATGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: GPGSSVQAGHSLHSPNQGAGRKS*CTGCVH
Trigger: GTGCACGCATCCAGTGCATCAGCTCTTGCGCCCAGC...ACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGGGGAGTGTGGCGCTCTaGGAGGGGACAGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWGSVAL*EGTAEL
Trigger: GAGCTCAGCTGTCCCCTCTCAGAGCGCCACACTCCC...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGTGACTGCCCCGTCCTaGAGCAGCCGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLVTAPS*SSRTAM
Trigger: CATGGCCGTGCGGCTGCTGCAGGACGGGGCAGTCAC...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTCCCATCCACCGTGACTaGCCCGTCCTGCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTPIHRD*PVLQQP
Trigger: CGGCTGCTGCAGGACGGGGCAGTCACGGTGGATGGG...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCGGCAAGGCCACCGGGTaGCCATCCACCGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSGKATG*PSTVTA
Trigger: GGCAGTCACGGTGGATGGGCACCCGGTGGCCTTGCC...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCAGCCCGGGCTGGGCGTaGAGGATCACAGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPSPGWA*RITVCP
Trigger: AGGACACACTGTGATCCTGCACGCCCAGCCCGGGCT...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGAATACCCGCGGCCCTCTTaGACCTGCCAGCTATTCCCA +
Preference number: 4 (lower is better)
Translates to: AGKGEHYFAGTGSSAPGEYPRPS*TCQLFP
Trigger: TGGGAATAGCTGGCAGGTGCAAGAGGGCCGCGGGTA...TTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp AGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGAAGTCCCACAGGAGCTaGTCCTGGGCCCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RLWSLCFQGPAGVPRMAMKSHRS*SWARRL
Trigger: GAGCCGGCGGGCCCAGGAGCAGCTCCTGTGGGACTT...CATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACACCTCACGGCCCTGGTaGACGCAGGACTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDTSRPW*TQDWVG
Trigger: TCCCACCCAGTCCTGCGTGCACCAGGGCCGTGAGGT...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGACCTCACGGCCCTGGTaGACGCAGGACTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWTSRPW*TQDWVG
Trigger: TCCCACCCAGTCCTGCGTGCACCAGGGCCGTGAGGT...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGACCTCACGGCCCTGGTaGACGCAGGACTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRTSRPW*TQDWVG
Trigger: TCCCACCCAGTCCTGCGTGCACCAGGGCCGTGAGGT...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCAACTGCCCTGGAAGTaGAGCAGGCGGCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LLLVTQHGGGLCRAGAQAQLPWK*SRRPSK
Trigger: CTTCGACGGCCGCCTGCTGCACTTCCAGGGCAGTTG...AGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp CCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTGCCAGGGCCCCGAGGTaGAGGAGAAGGGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: PVSRQGILSIALTRVGTAARAPR*RRRDSA
Trigger: TGCGCTGTCCCTTCTCCTGCACCTCGGGGCCCTGGC...AGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGCCAGGGCCCCGAGGTaGAGGAGAAGGGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTARAPR*RRRDSA
Trigger: TGCGCTGTCCCTTCTCCTGCACCTCGGGGCCCTGGC...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGTGGGCAGTTGTCTGCTaGCCAGGGGGCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SVQAGHSLHSPNQGGNCSWAVVC*PGGSLG
Trigger: CCCCAGGGAGCCCCCTGGGCAGCAGACAACTGCCCA...CGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp GGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGCAATGGGGCAGGTGTaGTTGGGGGCCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GPGSSVQAGHSLHSPNQGAMGQV*LGATVS
Trigger: GCTCACTGTGGCCCCCAAGCACACCTGCCCCATTGC...ACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp CTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCATTTGGCTGCAGCCCCTaGAATGGGGCAGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LLVTQHGGGLCRAGAQAPFGCSP*NGAGVL
Trigger: AAGCACACCTGCCCCATTGCAGGGGCTGCAGCCAAA...TGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGACAGGTTGGGCAGCAGTaGCCAGGCCTCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGQVGQQ*PGLSTG
Trigger: GCCAGTGCTGAGGCCTGGGCACTGCTGCCCAACCTG...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGGCTCCCCGCTGCGGTaGTCCCGCCCGTTTAGGAAA +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPGSPLR*SRPFRK
Trigger: TTTCCTAAACGGGCGGGAGCACCGCAGCGGGGAGCC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAGGCTCCCCGCTGCGGTaGTCCCGCCCGTTTAGGAAA +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEGSPLR*SRPFRK
Trigger: TTTCCTAAACGGGCGGGAGCACCGCAGCGGGGAGCC...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCACAGGCTCCCCGCTaGGGTGCTCCCGCCCGTTTA +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETPQAPR*GAPARL
Trigger: TAAACGGGCGGGAGCACCGCAGCGGGGAGCCTGTGG...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCATCTTGCCTGGGTGTCTaGAGGGCACTGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPSCLGV*RALAGR
Trigger: CCTGCCCGCCAGTGCCCTGCAGACACCCAGGCAAGA...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCTCTTGCCTGGGTGTCTaGAGGGCACTGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARSCLGV*RALAGR
Trigger: CCTGCCCGCCAGTGCCCTGCAGACACCCAGGCAAGA...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCAGGAGCAGCCCCTCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTGAAGGTGACTGGGCACTCCTaGTCCTCACAGGAGACCTCG +
Preference number: 4 (lower is better)
Translates to: GRSSPSGPCRSSWAKPLKVTGHS*SSQETS
Trigger: CGAGGTCTCCTGTGAGGAGCAGGAGTGCCCAGTCAC...CTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCTGCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCCAAAGGCACAGCCGCTaGAGTCGTTCGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPQRHSR*SRSGSR
Trigger: CCTGCTGCCCGAACGACTGCAGCGGCTGTGCCTTTG...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGGCTCGCAGCTCACGCTaGCCTCCCAGCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AALIKHEATLQGAAYHTQARSSR*PPSKGR
Trigger: TCTGCCTTTGCTGGGAGGGCAGCGTGAGCTGCGAGC...CTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp TTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCCAGTGCAGGGGCACATaGCTTGGGCTCGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: FTAGDSTWRGSLQGRGPGQCRGT*LGLAAH
Trigger: GTGAGCTGCGAGCCCAAGGCATGTGCCCCTGCACTG...GCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp TCATCAAACACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGCAGTGCAGGGGCACATaGCTTGGGCTCGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SSNTKPRSRGQPTTHSVGQCRGT*LGLAAH
Trigger: GTGAGCTGCGAGCCCAAGGCATGTGCCCCTGCACTG...CCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGGTCGGGCAGCAGTaGCCAGAGGGGATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARQVGQQ*PEGMSG
Trigger: CCCACTCATCCCCTCTGGGCACTGCTGCCCGACCTG...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCATCAAACACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGGGGGCACCCATCTACTaGCTTCGGGGTGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSNTKPRSRGQPTTHSVGGAPIY*LRGALP
Trigger: GGGAAGAGCACCCCGAAGGCAGTAGATGGGTGCCCC...CCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGA
63% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGATCCACCTCTCGGCCTaGAGAACAGGGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWIHLSA*RTGPAR
Trigger: CCTGGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGAT...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAATCCACCTCTCGGCCTaGAGAACAGGGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPIHLSA*RTGPAR
Trigger: CCTGGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGAT...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGGGCACGGTAACCTGCTaGCCGGCACGGATCCACCTC +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWGTVTC*PARIHL
Trigger: GAGGTGGATCCGTGCCGGGCAGCAGGTTACCGTGCC...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCACGCAGTGGGCTaGCAGCTCCCCCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETPHAVG*QLPQGD
Trigger: ATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGG...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGATGCTCCACCAGGCCTaGAGGGCACTGGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQMLHQA*RALAAG
Trigger: CCCGGCTGCCAGTGCCCTGCAGGCCTGGTGGAGCAT...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAATGCTCCACCAGGCCTaGAGGGCACTGGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLMLHQA*RALAAG
Trigger: CCCGGCTGCCAGTGCCCTGCAGGCCTGGTGGAGCAT...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCATGCTCCACCAGGCCTaGAGGGCACTGGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSMLHQA*RALAAG
Trigger: CCCGGCTGCCAGTGCCCTGCAGGCCTGGTGGAGCAT...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCAGGCCTCGGGTGGGATaGAGTGGGCCTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPRPRVG*SGPHAP
Trigger: TGGAGCATGAGGCCCACTGCATCCCACCCGAGGCCT...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGGAGGGCCCCTGGCACTaGACGGCTCCTGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWEGPWH*TAPVRQ
Trigger: CTGTCTGACAGGAGCCGTGCAGTGCCAGGGGCCCTC...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCAGCACCGCCACCTCCTaGGTCCAGGCCACACCGCTC +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSSTATS*VQATPL
Trigger: GAGCGGTGTGGCCTGGACCCAGGAGGTGGCGGTGCT...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGACGCTCACCTCCACCTaGGACTGCCCATCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AALIKHEATLQGAAYHTQTLTST*DCPSHS
Trigger: GCTGTGGGATGGGCAGTCCCAGGTGGAGGTGAGCGT...CTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp AGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGTGGCTCCATGCTTGCTaGGCCTGGCCCCTCGGACCG +
Preference number: 4 (lower is better)
Translates to: RLWSLCFQGPAGVPRMAMWLHAC*AWPLGP
Trigger: CGGTCCGAGGGGCCAGGCCCAGCAAGCATGGAGCCA...CATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGACCTTCGCCCAGCCATaGGGGCAGGAGAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLTFAQP*GQERAW
Trigger: CCAGGCCCTCTCCTGCCCCCATGGCTGGGCGAAGGT...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAGCCACCTCACGGCCCTaGTGCACGCAGGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLATSRP*CTQDWV
Trigger: CACCCAGTCCTGCGTGCACCAGGGCCGTGAGGTGGC...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAACCCAGGCCTCAGCACTaGCTCTGGGCAGGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQPRPQH*LWAGAR
Trigger: CCTAGCCCCTGCCCAGAGCCAGTGCTGAGGCCTGGG...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGTGGGAGGGGCCGGGCTaGGTATGGACACAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQWEGPG*VWTQAG
Trigger: GCCAGCCTGTGTCCATACCCAGCCCGGCCCCTCCCA...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTCCCAGGGATCTTGCCTaGGTGTCTGCAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPPRDLA*VSAGHW
Trigger: CCAGTGCCCTGCAGACACCCAGGCAAGATCCCTGGG...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCAGGAGCAGCCCCTCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTGAAGCAGAGGCCCCGCTCTTaGAGTCTGAAGGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRSSPSGPCRSSWAKPLKQRPRS*SLKVSW
Trigger: CCAGGAGACCTTCAGACTCCAAGAGCGGGGCCTCTG...CTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCTGCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGGCACAGGGGGTGACTaGGCACTCCTGCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPGTGGD*ALLLLT
Trigger: TGTGAGGAGCAGGAGTGCCCAGTCACCCCCTGTGCC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGCCTGGCACAGGTCGTaGGAGGGCAGTCAACCAAGG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPAWHRS*EGSQPR
Trigger: CCTTGGTTGACTGCCCTCCCACGACCTGTGCCAGGC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCGCCTGGCACAGGTCGTaGGAGGGCAGTCAACCAAGG +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPAWHRS*EGSQPR
Trigger: CCTTGGTTGACTGCCCTCCCACGACCTGTGCCAGGC...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATGGCATCGGCACTCCTaGCAGGGGTCTCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLWHRHS*QGSRGW
Trigger: CCACCCCCGAGACCCCTGCCAGGAGTGCCGATGCCA...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTGGCATCGGCACTCCTaGCAGGGGTCTCGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALWHRHS*QGSRGW
Trigger: CCACCCCCGAGACCCCTGCCAGGAGTGCCGATGCCA...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGGGCGAGGCTGGCAGTaGGCATGGCCTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPGRGWQ*AWPSWH
Trigger: ATGCCAGGAAGGCCATGCCCACTGCCAGCCTCGCCC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGGGCGAGGCTGGCAGTaGGCATGGCCTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEGRGWQ*AWPSWH
Trigger: ATGCCAGGAAGGCCATGCCCACTGCCAGCCTCGCCC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAGGGCGAGGCTGGCAGTaGGCATGGCCTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEGRGWQ*AWPSWH
Trigger: ATGCCAGGAAGGCCATGCCCACTGCCAGCCTCGCCC...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCGGGCAGGGGCGAGGCTaGCAGTGGGCATGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVGQGRG*QWAWPS
Trigger: GGAAGGCCATGCCCACTGCCAGCCTCGCCCCTGCCC...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCGGGGAGAAGTACTCCTaGTGGCGGGCGTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVGEKYS*WRAWAA
Trigger: CGCGGCCCACGCCCGCCACCAGGAGTACTTCTCCCC...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCGGAAGCGCTCCCCGCTaGCAAACTCCTTCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPGSAPR*QTPSPG
Trigger: ACCAGGGGAAGGAGTTTGCCAGCGGGGAGCGCTTCC...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGGCAGCAGTCGCCCCTaGCAGGGAAGGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLGSSRP*QGRGTV
Trigger: CACTGTGCCCCTTCCCTGCCAGGGGCGACTGCTGCC...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGGGCAGCAGTCGCCCCTaGCAGGGAAGGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALGSSRP*QGRGTV
Trigger: CACTGTGCCCCTTCCCTGCCAGGGGCGACTGCTGCC...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGAGGGGATGAGTGGGTaGCTGCAGCCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPEGMSG*LQPGGS
Trigger: TGAGCCTCCGGGCTGCAGCCACCCACTCATCCCCTC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCCCCAGAGGGGATGAGTaGGTGGCTGCAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSPRGDE*VAAARR
Trigger: CCTCCGGGCTGCAGCCACCCACTCATCCCCTCTGGG...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCCGCTCGGTGACCTaGAGCTTGCAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEPRSVT*SLQGRG
Trigger: ACCCCTTCCCTGCAAGCTCCAGGTCACCGAGCGGGG...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCCCTTGGCGGGGCTaGGCGCAAGAGCTGATGCAC +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSGPWRG*AQELMH
Trigger: GTGCATCAGCTCTTGCGCCCAGCCCCGCCAAGGGCC...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCGGCCCTTGGCGGGGCTaGGCGCAAGAGCTGATGCAC +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSGPWRG*AQELMH
Trigger: GTGCATCAGCTCTTGCGCCCAGCCCCGCCAAGGGCC...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCCAGTCATGGGGCCCTTaGCGGGGCTGGGCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCQSWGP*RGWAQE
Trigger: CTCTTGCGCCCAGCCCCGCCAAGGGCCCCATGACTG...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCCAGTCATGGGGCCCTTaGCGGGGCTGGGCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSQSWGP*RGWAQE
Trigger: CTCTTGCGCCCAGCCCCGCCAAGGGCCCCATGACTG...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGTCTGCCCCAGGCTaGAAGCTCTCCCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQGSAPG*KLSPGS
Trigger: CGAGCCTGGGGAGAGCTTCCAGCCTGGGGCAGACCC...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACCTCCCAGGGGGAGTGTaGCGCTCTGAGAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDLPGGV*RSERGQ
Trigger: CTGTCCCCTCTCAGAGCGCCACACTCCCCCTGGGAG...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTCATTGGCCTCACGCCTaGCACGGTAACCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPHWPHA*HGNLLP
Trigger: GGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATG...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGCCCCACACCGGGCATTaGCCTCACGCCTGGCACGGT +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLPHTGH*PHAWHG
Trigger: ACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGG...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGGTGCGGGGACAGGGTaGGCCGCACTCATCAAACAC +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPGAGTG*AALIKH
Trigger: GTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCACC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGTCGGGTGGGATGCAGTaGGCCTCATGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PGSSVQAGHSLHSPNQGGSGGMQ*ASCSTR
Trigger: CCTGGTGGAGCATGAGGCCCACTGCATCCCACCCGA...CCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGGGGCAGGCCTCGGGTaGGATGCAGTGGGCCTCATG +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTGAGLG*DAVGLM
Trigger: CATGAGGCCCACTGCATCCCACCCGAGGCCTGCCCC...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTGAAGTTCCCACAGAGCCCAGGGGCAGGCCTCGGGTaGGATGCAGTGGGCCTCATG +
Preference number: 4 (lower is better)
Translates to: SGPCRSSWAKPLKFPQSPGAGLG*DAVGLM
Trigger: CATGAGGCCCACTGCATCCCACCCGAGGCCTGCCCC...TGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGAACACGAGGGCCCCTaGCACTGCACGGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEEHEGP*HCTAPV
Trigger: GACAGGAGCCGTGCAGTGCCAGGGGCCCTCGTGTTC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCGCAGCACTCCCCAGGTaGGGTGCAGCTCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPAALPR*GAALQA
Trigger: TGCTTGGAGAGCTGCACCCCACCTGGGGAGTGCTGC...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCCGGAGCCGCTGCGTGAGCTTTCTTTTCTaGGTCTCAGGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RQWRFLAMWRRSRTRSRCVSFLF*VSGSAS
Trigger: TGAGGCAGAGCCTGAGACCCAGAAAAGAAAGCTCAC...GCAGCGGCTCCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCTCCCTCGGATGGCTATaGGGGTCGCCTTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALPAHRLWSLCFQGPAGVSLGWL*GSPSSG
Trigger: CCCAGAGGAAGGCGACCCCCATAGCCATCCGAGGGA...GACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTGGTCACGTGCACACTaGAGTCCCCGCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPWSRAH*SPRCGS
Trigger: ACTGCCACAGCGGGGACTTCAGTGTGCACGTGACCA...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAATGGTGCTCCCGGCCCTaGGAGAGACAGCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEWCSRP*ERQLWQ
Trigger: TTGCCACAGCTGTCTCTCTCAGGGCCGGGAGCACCA...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCAGCTCCCCCGCTCGGTaGCCTGGAGCTTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSSSPAR*PGACRE
Trigger: TTCCCTGCAAGCTCCAGGTCACCGAGCGGGGGAGCT...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGTGACGACGCCCTCGTaGCACACACAGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEVTTPS*HTQEEQ
Trigger: CTGCTCCTCCTGTGTGTGTCACGAGGGCGTCGTCAC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACGGATGCGTGCACAGGTaGCGACGCCCTCGTGACACA +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDGCVHR*RRPRDT
Trigger: TGTGTCACGAGGGCGTCGTCACCTGTGCACGCATCC...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCGGATGCGTGCACAGGTaGCGACGCCCTCGTGACACA +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARGCVHR*RRPRDT
Trigger: TGTGTCACGAGGGCGTCGTCACCTGTGCACGCATCC...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGCCTGATGAACCCTTATCAGGCACTGTCCTGGCTCAGGGTGTCTCCTGGGGCTGCTGGGCGCAAGAGCTaGTGCACTGGATGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: GLMNPYQALSWLRVSPGAAGRKS*CTGCVH
Trigger: GTGCACGCATCCAGTGCATCAGCTCTTGCGCCCAGC...AGCCCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATAAGGGTTCATCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR TCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCGCTGGGCGCAAGAGCTaGTGCACTGGATGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARAGRKS*CTGCVH
Trigger: GTGCACGCATCCAGTGCATCAGCTCTTGCGCCCAGC...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCGGGAGTGTGGCGCTCTaGGAGGGGACAGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSGSVAL*EGTAEL
Trigger: GAGCTCAGCTGTCCCCTCTCAGAGCGCCACACTCCC...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGGGAGTGTGGCGCTCTaGGAGGGGACAGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQGSVAL*EGTAEL
Trigger: GAGCTCAGCTGTCCCCTCTCAGAGCGCCACACTCCC...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGTGGCTGGTCTCCAGTaGGCAGGACTTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLVAGLQ*AGLGGR
Trigger: CCTGCCCCCAAGTCCTGCTCACTGGAGACCAGCCAC...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAGTGGCTGGTCTCCAGTaGGCAGGACTTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLVAGLQ*AGLGGR
Trigger: CCTGCCCCCAAGTCCTGCTCACTGGAGACCAGCCAC...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCGTGGCTGGTCTCCAGTaGGCAGGACTTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSVAGLQ*AGLGGR
Trigger: CCTGCCCCCAAGTCCTGCTCACTGGAGACCAGCCAC...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGGGTGCCCATCCACCTaGAGTCCCCGCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTGCPST*SPRCGS
Trigger: ACTGCCACAGCGGGGACTTCAGGTGGATGGGCACCC...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCCCATCCACCGTGACTaGCCCGTCCTGCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPPIHRD*PVLQQP
Trigger: CGGCTGCTGCAGGACGGGGCAGTCACGGTGGATGGG...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGTACAGCAGCGGCTCCTaGAGGAAGGGCAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGYSSGS*RKGKAT
Trigger: GGTGGCCTTGCCCTTCCTGCAGGAGCCGCTGCTGTA...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGTGGCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATTGCCTTCCCAAGTACAGCAGCGGCTCCTaGAGGAAGGGCAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: QWPLREPPPRLVRYCLPKYSSGS*RKGKAT
Trigger: GGTGGCCTTGCCCTTCCTGCAGGAGCCGCTGCTGTA...CTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GAGTTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAAGCCCGGGCTGGGCGTaGAGGATCACAGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: EFTAGDSTWRGSLQGRGPSPGWA*RITVCP
Trigger: AGGACACACTGTGATCCTGCACGCCCAGCCCGGGCT...TGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp GGCCTAGAGTTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGTCTGGCAACGCACGGTaGCCGCCATGCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLEFTAGDSTWRGSLQGRSGNAR*PPCRSS
Trigger: GCTGCTCCTGCATGGCGGGCACCGTGCGTTGCCAGA...CCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTCTAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGTCTGGCAACGCACGGTaGCCGCCATGCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQSGNAR*PPCRSS
Trigger: GCTGCTCCTGCATGGCGGGCACCGTGCGTTGCCAGA...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTGGTCTCCGAAGGCCATaGAGGAAGCGGGCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETGLRRP*RKRAEA
Trigger: TGCCTCGGCCCGCTTCCTGCATGGCCTTCGGAGACC...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTTGGGCAGTTGTCTGCTaGCCAGGGGGCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPWAVVC*PGGSLG
Trigger: CCCCAGGGAGCCCCCTGGGCAGCAGACAACTGCCCA...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGAATGGGCAGTTGTCTaGTGCCCAGGGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGEWAVV*CPGGSL
Trigger: CAGGGAGCCCCCTGGGCAGCAGACAACTGCCCATTC...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGAATGGGCAGTTGTCTaGTGCCCAGGGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEEWAVV*CPGGSL
Trigger: CAGGGAGCCCCCTGGGCAGCAGACAACTGCCCATTC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAGAATGGGCAGTTGTCTaGTGCCCAGGGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEEWAVV*CPGGSL
Trigger: CAGGGAGCCCCCTGGGCAGCAGACAACTGCCCATTC...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCGCAGGGGGTGCCACTaGTCCTGGGAGTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETRRGCH*SWEFPA
Trigger: TGCTGGGAACTCCCAGGAGCAGTGGCACCCCCTGCG...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCGCAGGGGGTGCCACTaGTCCTGGGAGTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQRRGCH*SWEFPA
Trigger: TGCTGGGAACTCCCAGGAGCAGTGGCACCCCCTGCG...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTTCACAGGACTCCAGCTaGCTCACCCTCGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPSQDSS*LTLVCR
Trigger: CCTGCAGACGAGGGTGAGGCAGCTGGAGTCCTGTGA...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCAGACGCAGGCTGTaGAGGCGTCAGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPGRRRL*RRQAPS
Trigger: GCTGGGAGCCTGACGCCTGCACAGCCTGCGTCTGCC...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGCAATGGGGCAGGTGTaGTTGGGGGCCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPAMGQV*LGATVS
Trigger: GCTCACTGTGGCCCCCAAGCACACCTGCCCCATTGC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGCAATGGGGCAGGTGTaGTTGGGGGCCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGAMGQV*LGATVS
Trigger: GCTCACTGTGGCCCCCAAGCACACCTGCCCCATTGC...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGCAGACAGGGCAGCACTaGCCAGGGATCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWQTGQH*PGILPG
Trigger: CCCAGGCAAGATCCCTGGGCAGTGCTGCCCTGTCTG...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGCTCGCAGCTCACGCTaGCCTCCCAGCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPARSSR*PPSKGR
Trigger: TCTGCCTTTGCTGGGAGGGCAGCGTGAGCTGCGAGC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCAGTGCAGGGGCACATaGCTTGGGCTCGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWQCRGT*LGLAAH
Trigger: GTGAGCTGCGAGCCCAAGGCATGTGCCCCTGCACTG...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCCTAGAGTTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGCAGGTCGGGCAGCAGTaGCCAGAGGGGATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GLEFTAGDSTWRGSLQGRQVGQQ*PEGMSG
Trigger: CCCACTCATCCCCTCTGGGCACTGCTGCCCGACCTG...CCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTCTAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCCAGGTCGGGCAGCAGTaGCCAGAGGGGATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSQVGQQ*PEGMSG
Trigger: CCCACTCATCCCCTCTGGGCACTGCTGCCCGACCTG...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGACACCACTCACAGCTaGCTGCTGGTCCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LLVTQHGGGLCRAGAQAPDTTHS*LLVPQT
Trigger: AGTTTGAGGGACCAGCAGGCAGCTGTGAGTGGTGTC...TGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGAAGGGGTGGGCACTaGAGCCGCACACAGCTGACC +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSGRGGH*SRTQLT
Trigger: GGTCAGCTGTGTGCGGCTGCAGTGCCCACCCCTTCC...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCGAGCCAGGCAGCCTCTaGAGCGAGGGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVEPGSL*SEGSSS
Trigger: GGAGCTGCTGCCCTCGCTGCAGAGGCTGCCTGGCTC...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGGGCACCCATCTACTaGCTTCGGGGTGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRGAPIY*LRGALP
Trigger: GGGAAGAGCACCCCGAAGGCAGTAGATGGGTGCCCC...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAGGGGCACCCATCTACTaGCTTCGGGGTGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEGAPIY*LRGALP
Trigger: GGGAAGAGCACCCCGAAGGCAGTAGATGGGTGCCCC...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCCTAGAGTTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCAGGTGCAGGCGATaGACGCATTGCTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLEFTAGDSTWRGSLQGRGRCRR*THCWGP
Trigger: GGGACCCCAGCAATGCGTGCATCGCCTGCACCTGCC...CCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTCTAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAATCCACCTCTCGGCCTaGAGAACAGGGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLIHLSA*RTGPAR
Trigger: CCTGGCCGGCCCTGTTCTGCAGGCCGAGAGGTGGAT...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCCTGGCACGGTAACCTaGTGCCCGGCACGGATCCAC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQPGTVT*CPARIH
Trigger: GTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGG...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGCCTGGCACGGTAACCTaGTGCCCGGCACGGATCCAC +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLPGTVT*CPARIH
Trigger: GTGGATCCGTGCCGGGCAGCAGGTTACCGTGCCAGG...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGAGGCCTCGGGTGGGATaGAGTGGGCCTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGRPRVG*SGPHAP
Trigger: TGGAGCATGAGGCCCACTGCATCCCACCCGAGGCCT...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGACTGGGTCTCAGGCTCTaGCTCACTCCTCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: CWEGRALLRRHGILSTRGLGLRL*LTPLFP
Trigger: AGGGAAGAGAGGAGTGAGGCAGAGCCTGAGACCCAG...TCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp CTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGCCGAGGAGCCCCTGCTaGCCGGATACCTCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: LVRYCLPKTAASSSLDSGPRSPC*PDTSAR
Trigger: GCGCGCCGAGGTATCCGGGCAGCAGGGGCTCCTCGG...CCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCACCTGGAGCCCGGGCTaGGCGTGCAGGATCACAGTG +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSTWSPG*ACRITV
Trigger: CACTGTGATCCTGCACGCCCAGCCCGGGCTCCAGGT...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGACCTGGAGCCCGGGCTaGGCGTGCAGGATCACAGTG +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALTWSPG*ACRITV
Trigger: CACTGTGATCCTGCACGCCCAGCCCGGGCTCCAGGT...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGCACGCAGGACTGGGTaGGAGCTTGGCATCGCTCAC +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGARRTG*ELGIAH
Trigger: GTGAGCGATGCCAAGCTCCCACCCAGTCCTGCGTGC...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGTGGTGCACGCAGGACTaGGTGGGAGCTTGGCATCGC +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWWCTQD*VGAWHR
Trigger: GCGATGCCAAGCTCCCACCCAGTCCTGCGTGCACCA...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp AGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGAGCGGTGAGCAGCGCTaGCTCTGGCAACGCACGGTG +
Preference number: 4 (lower is better)
Translates to: SVQAGHSLHSPNQGGNCSSGEQR*LWQRTV
Trigger: CACCGTGCGTTGCCAGAGCCAGCGCTGCTCACCGCT...CGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGAGCGGTGAGCAGCGCTaGCTCTGGCAACGCACGGTG +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALSGEQR*LWQRTV
Trigger: CACCGTGCGTTGCCAGAGCCAGCGCTGCTCACCGCT...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGGGGTGCCACTGCTCCTaGGAGTTCCCAGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: PGSSVQAGHSLHSPNQGGGCHCS*EFPART
Trigger: AGTCCTTGCTGGGAACTCCCAGGAGCAGTGGCACCC...CCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGGGTGGTGCAGGCATCTaGGGAGAAGGTCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: PGSSVQAGHSLHSPNQGGGGAGI*GEGLPV
Trigger: AACGGGGAGACCTTCTCCCCAGATGCCTGCACCACC...CCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGGTGGTGCAGGCATCTaGGGAGAAGGTCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPGGAGI*GEGLPV
Trigger: AACGGGGAGACCTTCTCCCCAGATGCCTGCACCACC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAGGGCCGGGCTGGGTATaGACACAGGCTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: QAPVSRQGILSIALTRVGGPGWV*TQAGTF
Trigger: GAATGTGCCAGCCTGTGTCCATACCCAGCCCGGCCC...TCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGGGGCCGGGCTGGGTATaGACACAGGCTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWGPGWV*TQAGTF
Trigger: GAATGTGCCAGCCTGTGTCCATACCCAGCCCGGCCC...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGCCCAGGGATCTTGCCTaGGTGTCTGCAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRPRDLA*VSAGHW
Trigger: CCAGTGCCCTGCAGACACCCAGGCAAGATCCCTGGG...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCCAGAGGCCCCGCTCTTaGAGTCTGAAGGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FTAGDSTWRGSLQGRGPGQRPRS*SLKVSW
Trigger: CCAGGAGACCTTCAGACTCCAAGAGCGGGGCCTCTG...GCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTGGCCTGGTCCACTCTaGGGCCTGGCACAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALWPGPL*GLAQVV
Trigger: CACGACCTGTGCCAGGCCCCAGAGTGGACCAGGCCA...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCCACCTGGGGCAACACTaGCCTGGTCCACTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSHLGQH*PGPLWG
Trigger: GCCCCAGAGTGGACCAGGCCAGTGTTGCCCCAGGTG...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCGGCTGGCAGTGGGCATaGCCTTCCTGGCATCGGCAC +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSGWQWA*PSWHRH
Trigger: GTGCCGATGCCAGGAAGGCCATGCCCACTGCCAGCC...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCACAGCAGGACAGGCTCTaGACAGGGCAGCGGCACGCA +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSQQDRL*TGQRHA
Trigger: TGCGTGCCGCTGCCCTGTCCAGAGCCTGTCCTGCTG...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCCAGCAGGACAGGCTCTaGACAGGGCAGCGGCACGCA +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSQQDRL*TGQRHA
Trigger: TGCGTGCCGCTGCCCTGTCCAGAGCCTGTCCTGCTG...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGCAAACTCCTTCCCCTaGTACAGGCAGCCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPANSFP*YRQPSQ
Trigger: CTGCGACGGCTGCCTGTACCAGGGGAAGGAGTTTGC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGGAAGCGCTCCCCGCTaGCAAACTCCTTCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEGSAPR*QTPSPG
Trigger: ACCAGGGGAAGGAGTTTGCCAGCGGGGAGCGCTTCC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCAGGGGCACATGCCTTaGGCTCGCAGCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQQGHMP*ARSSRC
Trigger: GCAGCGTGAGCTGCGAGCCCAAGGCATGTGCCCCTG...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCTTGCAGGGAAGGGGTaGGCACTGCAGCCGCACACA +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARLAGKG*ALQPHT
Trigger: TGTGTGCGGCTGCAGTGCCCACCCCTTCCCTGCAAG...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGCTTGCAGGGAAGGGGTaGGCACTGCAGCCGCACACA +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWLAGKG*ALQPHT
Trigger: TGTGTGCGGCTGCAGTGCCCACCCCTTCCCTGCAAG...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCCCGCTCGGTGACCTaGAGCTTGCAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SVQAGHSLHSPNQGGNCSPRSVT*SLQGRG
Trigger: ACCCCTTCCCTGCAAGCTCCAGGTCACCGAGCGGGG...CGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGCGATGCACGCATTGCTaGGGTCCCGCCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWRCTHC*GPASSL
Trigger: GAGAGAGCTGGCGGGACCCCAGCAATGCGTGCATCG...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGAGGTGGCACTCCACATaGCCCCGATGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWRWHST*PRWQVQ
Trigger: CTGCACCTGCCATCGGGGCCATGTGGAGTGCCACCT...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GGGGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGATGGCAGCGACTGAATaGGGAGGACTTCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: GAQAPVSRQGILSIALTRMAATE*GGLQHP
Trigger: GGGGTGCTGAAGTCCTCCCCATTCAGTCGCTGCCAT...CCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CACTCCTGCCTGGCGACAGTGACTGGCGTAGGCTTCCAGGGCATCACAGAGGCAAAAGAAGGGCTCCGGTaGCACCACAGCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: HSCLATVTGVGFQGITEAKEGLR*HHSMAA
Trigger: CGCTGCCATGCTGTGGTGCCACCGGAGCCCTTCTTT...TGCCTCTGTGATGCCCTGGAAGCCTACGCCAGTCACTGTCGCCAGGCAGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp GGCCACAGGCACACAGGTCATACACACAGGCGGCAAAGAAGGGCTCCGGTGGCACCTGGCGACAGTGACTaGCGTAGGCTTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GHRHTGHTHRRQRRAPVAPGDSD*RRLPGH
Trigger: ATGCCCTGGAAGCCTACGCCAGTCACTGTCGCCAGG...TGCCACCGGAGCCCTTCTTTGCCGCCTGTGTGTATGACCTGTGTGCCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGTCGGGTGGGATGCAGTaGGCCTCATGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGSGGMQ*ASCSTR
Trigger: CCTGGTGGAGCATGAGGCCCACTGCATCCCACCCGA...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGGCCGAGCACCAAGTaGCTGGTCTCCAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRGPSTK*LVSSEQ
Trigger: CTGCTCACTGGAGACCAGCCACTTGGTGCTCGGCCC...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATGGTGCACGCAGGACTaGGTGGGAGCCCGGCATACG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLWCTQD*VGARHT
Trigger: CGTATGCCGGGCTCCCACCCAGTCCTGCGTGCACCA...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTTGGTGCACGCAGGACTaGGTGGGAGCCCGGCATACG +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTWCTQD*VGARHT
Trigger: CGTATGCCGGGCTCCCACCCAGTCCTGCGTGCACCA...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGGGTGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGAGTTCCAGGAAGTTCTaGGTGTTCCTGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RVLGRASTTSQARDPQHQSSRKF*VFLAPR
Trigger: CCTCGGGGCCAGGAACACCCAGAACTTCCTGGAACT...CTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CAA 72 bp TTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTaGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: FSGGLGSPCPQA*ESVLSGTRRSP
Trigger: GGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp CACTCCTGCCTGGCGACAGTGACTGGCGTAGGCTTCCAGGGCATCACAGAGGCACCTGGGCAAAGCCATTaGAGTTCCCACAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: HSCLATVTGVGFQGITEAPGQSH*SSHRAH
Trigger: GTGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGG...TGCCTCTGTGATGCCCTGGAAGCCTACGCCAGTCACTGTCGCCAGGCAGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR TCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCATGGTCACGTGCACACTaGAGTCCCCGCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPWSRAH*SPRCGS
Trigger: ACTGCCACAGCGGGGACTTCAGTGTGCACGTGACCA...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGGCCTTATTCTGTTCTCTaGGCTCCATCACTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VRGQGGPHSSNTKPRSRGPYSVL*APSLQP
Trigger: AGGCTGCAGTGATGGAGCTCAGAGAACAGAATAAGG...CCCCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR TCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTTGGCCATGTTCCCAGTaGGAGCCACCTTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPWPCSQ*EPPSVQ
Trigger: CTGCACAGAAGGTGGCTCTCACTGGGAACATGGCCA...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGCAGGAGCAGCCCCTCAGGGCCCTGCAGATCGTCCTGGGCAAAGCCATTGAAGAAGGTCTCCTGGCTCTaGTACTGGTGTCCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GRSSPSGPCRSSWAKPLKKVSWL*YWCPWY
Trigger: GTACCAGGGACACCAGTATCAGAGCCAGGAGACCTT...CTTCAATGGCTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCTGCTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR TCA 90 bp TTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCCCCGCTCTTGGAGTCTaGAGGTCTCCTGGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: FTAGDSTWRGSLQGRGPGPALGV*RSPGSD
Trigger: ATCAGAGCCAGGAGACCTTCAGACTCCAAGAGCGGG...GCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCTTGGGTACCCCATCTTaGCAGACGCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARLGTPS*QTQAVQ
Trigger: CTGCACCGCCTGCGTCTGTCAAGATGGGGTACCCAA...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTGACGACGCCCTCGTaGCACACACAGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTVTTPS*HTQEEQ
Trigger: CTGCTCCTCCTGTGTGTGTCACGAGGGCGTCGTCAC...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAGTGACGACGCCCTCGTaGCACACACAGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLVTTPS*HTQEEQ
Trigger: CTGCTCCTCCTGTGTGTGTCACGAGGGCGTCGTCAC...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAAGGCCACAGCCCCTCTaGGACCTGCCAGCTATTCCC +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSRPQPL*DLPAIP
Trigger: GGGAATAGCTGGCAGGTCTCAGAGGGGCTGTGGCCT...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTCAGCATGGCAGCGACTaGATGGGGAGGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GPGSSVQAGHSLHSPNQGQHGSD*MGRTSA
Trigger: TGCTGAAGTCCTCCCCATTCAGTCGCTGCCATGCTG...ACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGGGGATATGCTGATTaGAGCAGGTGCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGGGYAD*SRCGDR
Trigger: CCTGTCCCCGCACCTGCTTCAATCAGCATATCCCCC...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACGGGGGATATGCTGATTaGAGCAGGTGCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDGGYAD*SRCGDR
Trigger: CCTGTCCCCGCACCTGCTTCAATCAGCATATCCCCC...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGTTTGTGGCTCGCCTTTaGTCATGCTCTGCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: LRQRGSPSPEVWALPAHRFVARL*SCSASA
Trigger: CGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAA...CCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTTACAGCAGCGGCTCCTaGAGGAAGGGCAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETYSSGS*RKGKAT
Trigger: GGTGGCCTTGCCCTTCCTGCAGGAGCCGCTGCTGTA...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTCAACTGCCCTGGAAGTaGAGCAGGCGGCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTQLPWK*SRRPSK
Trigger: CTTCGACGGCCGCCTGCTGCACTTCCAGGGCAGTTG...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCACTCTCGCAGGGGGTaGCACTGCTCCTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQHSRRG*HCSWEF
Trigger: GAACTCCCAGGAGCAGTGGCACCCCCTGCGAGAGTG...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTACACTCTCGCAGGGGGTaGCACTGCTCCTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLHSRRG*HCSWEF
Trigger: GAACTCCCAGGAGCAGTGGCACCCCCTGCGAGAGTG...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGTCACAGGACTCCAGCTaGCTCACCCTCGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGESQDSS*LTLVCR
Trigger: CCTGCAGACGAGGGTGAGGCAGCTGGAGTCCTGTGA...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTTTTGGCTGCAGCCCCTaGAATGGGGCAGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPFGCSP*NGAGVL
Trigger: AAGCACACCTGCCCCATTGCAGGGGCTGCAGCCAAA...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGGGCACTTCAGGGCCATaGAGCGAACTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWGTSGP*SELGSS
Trigger: TGAGGAGCCGAGTTCGCTGCATGGCCCTGAAGTGCC...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCAGGTTGGGCAGCAGTaGCCAGGCCTCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVQVGQQ*PGLSTG
Trigger: GCCAGTGCTGAGGCCTGGGCACTGCTGCCCAACCTG...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAACAGACAGGGCAGCACTaGCCAGGGATCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQQTGQH*PGILPG
Trigger: CCCAGGCAAGATCCCTGGGCAGTGCTGCCCTGTCTG...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCAGGGCCTCACGCAGTGGGCTGCCAGCTCCCCCAGGGGGATATGCTGATTGAAATGGCAAGGGCTGTCTaGATCCGTGAAGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGPHAVGCQLPQGDMLIEMARAV*IREVLP
Trigger: GGGCAGAACTTCACGGATGCAGACAGCCCTTGCCAT...TTCAATCAGCATATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCCAAAGGCACAGCCGCTaGAGTCGTTCGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSQRHSR*SRSGSR
Trigger: CCTGCTGCCCGAACGACTGCAGCGGCTGTGCCTTTG...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCGCTCGCAGCTCACGCTaGCCTCCCAGCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSARSSR*PPSKGR
Trigger: TCTGCCTTTGCTGGGAGGGCAGCGTGAGCTGCGAGC...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCAGGGAAGGGGCACAGTaGAGGGGCACATGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSREGAQ*RGTCLG
Trigger: CCCAAGGCATGTGCCCCTGCACTGTGCCCCTTCCCT...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAAGGGAAGGGGCACAGTaGAGGGGCACATGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSREGAQ*RGTCLG
Trigger: CCCAAGGCATGTGCCCCTGCACTGTGCCCCTTCCCT...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCGATGCACTGGATGCGTaGACAGGTGACGACGCCCTC +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARDALDA*TGDDAL
Trigger: GAGGGCGTCGTCACCTGTGCACGCATCCAGTGCATC...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGCACTTCACAGGGGTCTaGCCCAGGCTGGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGHFTGV*PRLEAL
Trigger: GAGAGCTTCCAGCCTGGGGCAGACCCCTGTGAAGTG...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCCTAGAGTTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGAGGCGATGCACGCATTaGTGGGGTCCCGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLEFTAGDSTWRGSLQGRRRCTH*WGPASS
Trigger: AGAGCTGGCGGGACCCCAGCAATGCGTGCATCGCCT...CCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTCTAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp AGGGTGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGAGGCTTTGGAGTCTGTaGTTTCAGGGACCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RVLGRASTTSQARDPQHQRLWSL*FQGPAG
Trigger: TCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCT...CTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTACGCTCACCTCCACCTaGGACTGCCCATCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTTLTST*DCPSHS
Trigger: GCTGTGGGATGGGCAGTCCCAGGTGGAGGTGAGCGT...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCACGCTCACCTCCACCTaGGACTGCCCATCCCACAGC +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSTLTST*DCPSHS
Trigger: GCTGTGGGATGGGCAGTCCCAGGTGGAGGTGAGCGT...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCACCCTGCAGATCGTCCTaGGCAAAGCCATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LLVTQHGGGLCRAGAQAPPCRSS*AKPLKF
Trigger: GAACTTCAATGGCTTTGCCCAGGACGATCTGCAGGG...TGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTGCGTCAGCGTGGTAGTAAACTGGGCCTGGGGTaGCCAGAAGAGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RCRPLWLAFDHALRQRGSKLGLG*PEEAQL
Trigger: GAGCTGGGCCTCTTCTGGCCACCCCAGGCCCAGTTT...ACTACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGCTCGGACCGAAAAACTaGGCCTGGGGTGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GFGVCAFRDPQESLGWLWLGPKN*AWGGQK
Trigger: CTTCTGGCCACCCCAGGCCCAGTTTTTCGGTCCGAG...CCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCATGCAGGAGCAGCTaGTGCAGGTGTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEPCRSS*CRCPQS
Trigger: GGACTGTGGACACCTGCACCAGCTGCTCCTGCATGG...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGACCATGCAGGAGCAGCTaGTGCAGGTGTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGPCRSS*CRCPQS
Trigger: GGACTGTGGACACCTGCACCAGCTGCTCCTGCATGG...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTCGCTGTGGCAGTCCTTaGCCAGCACATAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GPGSSVQAGHSLHSPNQGRCGSP*PAHSCN
Trigger: GTTGCAGCTATGTGCTGGCCAAGGACTGCCACAGCG...ACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCTGGGGAGATGCAGGGTaGCACTCACAGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARWGDAG*HSQDSS
Trigger: GCTGGAGTCCTGTGAGTGCCACCCTGCATCTCCCCA...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCACTCATAATCACAGCCTaGCTTACAGTGCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: STWRGSLQGRGPGSSVQALIITA*LTVRAA
Trigger: TGCTGCCCGCACTGTAAGCCAGGCTGTGATTATGAG...TGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GAGTTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGTATGGACACAGGCTaGCACATTCTCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: EFTAGDSTWRGSLQGRGPGMDTG*HILAGG
Trigger: GCCGCCAGCGAGAATGTGCCAGCCTGTGTCCATACC...TGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGCAGAGGCCCCGCTCTTaGAGTCTGAAGGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWQRPRS*SLKVSW
Trigger: CCAGGAGACCTTCAGACTCCAAGAGCGGGGCCTCTG...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCGGCACAGGGGGTGACTaGGCACTCCTGCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSGTGGD*ALLLLT
Trigger: TGTGAGGAGCAGGAGTGCCCAGTCACCCCCTGTGCC...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCACCTGGGGCAACACTaGCCTGGTCCACTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPHLGQH*PGPLWG
Trigger: GCCCCAGAGTGGACCAGGCCAGTGTTGCCCCAGGTG...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATGGGCATGGCCTTCCTaGCATCGGCACTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLWAWPS*HRHSWQ
Trigger: CTGCCAGGAGTGCCGATGCCAGGAAGGCCATGCCCA...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGGCATGGCCTTCCTaGCATCGGCACTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSWAWPS*HRHSWQ
Trigger: CTGCCAGGAGTGCCGATGCCAGGAAGGCCATGCCCA...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTGGAAGCGCTCCCCGCTaGCAAACTCCTTCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETGSAPR*QTPSPG
Trigger: ACCAGGGGAAGGAGTTTGCCAGCGGGGAGCGCTTCC...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCAGGGGCACATGCCTTaGGCTCGCAGCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPQGHMP*ARSSRC
Trigger: GCAGCGTGAGCTGCGAGCCCAAGGCATGTGCCCCTG...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCATCAAACACGAAGCCACGCTCCAGGGGGCAGCCTACCACACACAGCGTGGGGGGGTTCTCGGGGGTCTaGGAACTCCTGGTTACTCAG +
Preference number: 4 (lower is better)
Translates to: SSNTKPRSRGQPTTHSVGGFSGV*ELLVTQ
Trigger: CTGAGTAACCAGGAGTTCCCAGACCCCCGAGAACCC...CCCCACGCTGTGTGTGGTAGGCTGCCCCCTGGAGCGTGGCTTCGTGTTTGATGA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CCTCACGCAGTGGGCTGCCAGCTCCCCCAGGGGGATATGCTGATTGAAGCAGGTGCAGGTAGGGTCAAGTaGGTCAGGAAGGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PHAVGCQLPQGDMLIEAGAGRVK*VRKGLS
Trigger: GGAGAGACCCTTCCTGACCCACTTGACCCTACCTGC...ACCTGCTTCAATCAGCATATCCCCCTGGGGGAGCTGGCAGCCCACTGCGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCGCAGGTAGGGTCAAGTaGGTCAGGAAGGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPAGRVK*VRKGLS
Trigger: GGAGAGACCCTTCCTGACCCACTTGACCCTACCTGC...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCTCACAGCTGCCTGCTaGTCCCTCAAACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWLTAAC*SLKLLP
Trigger: GGGGAGGAGTTTGAGGGACCAGCAGGCAGCTGTGAG...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGACTCACAGCTGCCTGCTaGTCCCTCAAACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGLTAAC*SLKLLP
Trigger: GGGGAGGAGTTTGAGGGACCAGCAGGCAGCTGTGAG...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGCTCACAGCTGCCTGCTaGTCCCTCAAACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGLTAAC*SLKLLP
Trigger: GGGGAGGAGTTTGAGGGACCAGCAGGCAGCTGTGAG...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAACTTGCAGGGAAGGGGTaGGCACTGCAGCCGCACACA +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQLAGKG*ALQPHT
Trigger: TGTGTGCGGCTGCAGTGCCCACCCCTTCCCTGCAAG...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTCCCAGGGGGAGTGTaGCGCTCTGAGAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVLPGGV*RSERGQ
Trigger: CTGTCCCCTCTCAGAGCGCCACACTCCCCCTGGGAG...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTCATTGGCCTCACGCCTaGCACGGTAACCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTHWPHA*HGNLLP
Trigger: GGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATG...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGTGGCACCACAGCATaGCAGCGACTGAATGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGGGTTA*QRLNGE
Trigger: CTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACC...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCAAAGAAGGGCTCCGGTaGCACCACAGCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARKEGLR*HHSMAA
Trigger: CGCTGCCATGCTGTGGTGCCACCGGAGCCCTTCTTT...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACCCTGGCGACAGTGACTaGCGTAGGCTTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDPGDSD*RRLPGH
Trigger: ATGCCCTGGAAGCCTACGCCAGTCACTGTCGCCAGG...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGGTGCGGGGACAGGGTaGGCCGCACTCATCAAACAC +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTGAGTG*AALIKH
Trigger: GTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCACC...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAGGTGCGGGGACAGGGTaGGCCGCACTCATCAAACAC +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLGAGTG*AALIKH
Trigger: GTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCACC...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGCTGGTGACTCAACATaGCGGGGGTCTTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGAGDST*RGSLQG
Trigger: GCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGC...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGAACGGTGCCGACCTTTGTaGCTCGCCTTTGATCATGCT +
Preference number: 4 (lower is better)
Translates to: AGKGEHYFAGTGSSAPGERCRPL*LAFDHA
Trigger: AGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCG...TTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCATGGCCATGTTCCCAGTaGGAGCCACCTTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPWPCSQ*EPPSVQ
Trigger: CTGCACAGAAGGTGGCTCTCACTGGGAACATGGCCA...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGTTGGGTACCCCATCTTaGCAGACGCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLLGTPS*QTQAVQ
Trigger: CTGCACCGCCTGCGTCTGTCAAGATGGGGTACCCAA...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGCTGTCTGCATCCGTaGAGTTCTGCCCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: GPGSSVQAGHSLHSPNQGGCLHP*SSAHWH
Trigger: ATGCCAATGGGCAGAACTTCACGGATGCAGACAGCC...ACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCGGCTGTCTGCATCCGTaGAGTTCTGCCCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPGCLHP*SSAHWH
Trigger: ATGCCAATGGGCAGAACTTCACGGATGCAGACAGCC...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGCAGCATGGCAGCGACTaGATGGGGAGGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWQHGSD*MGRTSA
Trigger: TGCTGAAGTCCTCCCCATTCAGTCGCTGCCATGCTG...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGGGGGGATATGCTGATTaGAGCAGGTGCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SVQAGHSLHSPNQGGNCSGGYAD*SRCGDR
Trigger: CCTGTCCCCGCACCTGCTTCAATCAGCATATCCCCC...CGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTACAAGCAGTTGAGCTCTaGACACGAGGGCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLQAVEL*TRGPLA
Trigger: TGCCAGGGGCCCTCGTGTTCAGAGCTCAACTGCTTG...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CACTTAGGACTAAATTCTCTTCGACTCCTCCCTCTGACCCTGAGGAGCCCTTGGGTGACTGCCCCGTCCTaGAGCAGCCGCACGGCCATG +
Preference number: 4 (lower is better)
Translates to: HLGLNSLRLLPLTLRSPWVTAPS*SSRTAM
Trigger: CATGGCCGTGCGGCTGCTGCAGGACGGGGCAGTCAC...CCAAGGGCTCCTCAGGGTCAGAGGGAGGAGTCGAAGAGAATTTAGTCCTAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTAGCCCCTCAGGGCCCTaGAGATCGTCCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPSPSGP*RSSWAK
Trigger: CTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCT...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCGCCTTTGATCATGCTCTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTGGGAGCCCCTCAGGGCCCTaGAGATCGTCCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SPLIMLCVSVVVLLRRFGSPSGP*RSSWAK
Trigger: CTTTGCCCAGGACGATCTGCAGGGCCCTGAGGGGCT...CCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAGAGCATGATCAAAGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCGCACATAGCTGCAACTaGCCTGGAAGTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARAHSCN*PGSAAG
Trigger: GCCTGCTGCACTTCCAGGGCAGTTGCAGCTATGTGC...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCCTGATGAACCCTTATCAGGCACTGTCCTGGCTCAGGGTGTCTCCTGGGGCTGCACATAGCTGCAACTaGCCTGGAAGTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLMNPYQALSWLRVSPGAAHSCN*PGSAAG
Trigger: GCCTGCTGCACTTCCAGGGCAGTTGCAGCTATGTGC...AGCCCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATAAGGGTTCATCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR GCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCACAGGACTCCAGCTaGCTCACCCTCGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSSQDSS*LTLVCR
Trigger: CCTGCAGACGAGGGTGAGGCAGCTGGAGTCCTGTGA...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGTTTGGCTGCAGCCCCTaGAATGGGGCAGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRFGCSP*NGAGVL
Trigger: AAGCACACCTGCCCCATTGCAGGGGCTGCAGCCAAA...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCGGCACTTCAGGGCCATaGAGCGAACTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCGTSGP*SELGSS
Trigger: TGAGGAGCCGAGTTCGCTGCATGGCCCTGAAGTGCC...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGGTGACTGGGCACTCCTaGTCCTCACAGGAGACCTCG +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALVTGHS*SSQETS
Trigger: CGAGGTCTCCTGTGAGGAGCAGGAGTGCCCAGTCAC...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAGACAGGTACACAGGTTaGAGGGTTCTCGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPDRYTG*RVLGGL
Trigger: CAGACCCCCGAGAACCCTGCAACCTGTGTACCTGTC...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGGACAGGTACACAGGTTaGAGGGTTCTCGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWDRYTG*RVLGGL
Trigger: CAGACCCCCGAGAACCCTGCAACCTGTGTACCTGTC...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCGATGCACTGGATGCGTaGACAGGTGACGACGCCCTC +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSDALDA*TGDDAL
Trigger: GAGGGCGTCGTCACCTGTGCACGCATCCAGTGCATC...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCACTTCACAGGGGTCTaGCCCAGGCTGGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQHFTGV*PRLEAL
Trigger: GAGAGCTTCCAGCCTGGGGCAGACCCCTGTGAAGTG...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGCTGTGGCTCGCAGATaGACACTTCACAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRAVARR*TLHRGL
Trigger: CAGACCCCTGTGAAGTGTGCATCTGCGAGCCACAGC...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCGCTGTGGCTCGCAGATaGACACTTCACAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARAVARR*TLHRGL
Trigger: CAGACCCCTGTGAAGTGTGCATCTGCGAGCCACAGC...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGCTGTGGCTCGCAGATaGACACTTCACAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEAVARR*TLHRGL
Trigger: CAGACCCCTGTGAAGTGTGCATCTGCGAGCCACAGC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGTAGGTGTCACTCCTaGCTGGCGACAGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQGRCHS*LATVTG
Trigger: GCCAGTCACTGTCGCCAGGCAGGAGTGACACCTACC...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGAACCAGGGTGGGAACTaGTCGCCAAGGGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: SVQAGHSLHSPNQGGNCSNQGGN*SPRGDS
Trigger: GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT...CGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAAACCAGGGTGGGAACTaGTCGCCAAGGGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQNQGGN*SPRGDS
Trigger: GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGGACTGGGTGGGAGCTTaGCATCGCTCACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SVQAGHSLHSPNQGGNCSDWVGA*HRSQQL
Trigger: CAGCTGCTGTGAGCGATGCCAAGCTCCCACCCAGTC...CGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCACGCTGTGGCAGTCCTTaGCCAGCACATAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPRCGSP*PAHSCN
Trigger: GTTGCAGCTATGTGCTGGCCAAGGACTGCCACAGCG...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGCGCTGTGGCAGTCCTTaGCCAGCACATAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRRCGSP*PAHSCN
Trigger: GTTGCAGCTATGTGCTGGCCAAGGACTGCCACAGCG...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCTGAAGTCCCCGCTGTaGCAGTCCTTGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SVQAGHSLHSPNQGGNCSLKSPL*QSLAST
Trigger: TGTGCTGGCCAAGGACTGCCACAGCGGGGACTTCAG...CGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGCTGAAGTCCCCGCTGTaGCAGTCCTTGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALLKSPL*QSLAST
Trigger: TGTGCTGGCCAAGGACTGCCACAGCGGGGACTTCAG...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAGGGTGCCACTGCTCCTaGGAGTTCCCAGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLGCHCS*EFPART
Trigger: AGTCCTTGCTGGGAACTCCCAGGAGCAGTGGCACCC...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGGGAGATGCAGGGTaGCACTCACAGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSWGDAG*HSQDSS
Trigger: GCTGGAGTCCTGTGAGTGCCACCCTGCATCTCCCCA...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGCCTTCTGTGCAGCCTTaGCAGGTTGGGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALPSVQP*QVGQQC
Trigger: GCACTGCTGCCCAACCTGCCAAGGCTGCACAGAAGG...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCCCTTCTGTGCAGCCTTaGCAGGTTGGGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSPSVQP*QVGQQC
Trigger: GCACTGCTGCCCAACCTGCCAAGGCTGCACAGAAGG...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCGGTATGGACACAGGCTaGCACATTCTCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSGMDTG*HILAGG
Trigger: GCCGCCAGCGAGAATGTGCCAGCCTGTGTCCATACC...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGGTATGGACACAGGCTaGCACATTCTCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTGMDTG*HILAGG
Trigger: GCCGCCAGCGAGAATGTGCCAGCCTGTGTCCATACC...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCGGGCCGGGCTGGGTATaGACACAGGCTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVGPGWV*TQAGTF
Trigger: GAATGTGCCAGCCTGTGTCCATACCCAGCCCGGCCC...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGGCAGAGGCTCACACTaGACACTCCCATTAGCACAG +
Preference number: 4 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPGRGSH*TLPLAQ
Trigger: CTGTGCTAATGGGAGTGTCCAGTGTGAGCCTCTGCC...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACCCATCAGGCTCCCACTaGACTCCCTCAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDPSGSH*TPSANS
Trigger: GGAGTTTGCTGAGGGAGTCCAGTGGGAGCCTGATGG...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCTCCAGGATGCAGTCTaGGCACCTGGGGCAACACTG +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQLQDAV*APGATL
Trigger: CAGTGTTGCCCCAGGTGCCCAGACTGCATCCTGGAG...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCGGAAGTCCGCTCCGCTaGGGTACTCTTTCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSGSPLR*GTLSRQ
Trigger: TTGGCGGGAAAGAGTACCCCAGCGGAGCGGACTTCC...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTGCAAACTCCTTCCCCTaGTACAGGCAGCCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETANSFP*YRQPSQ
Trigger: CTGCGACGGCTGCCTGTACCAGGGGAAGGAGTTTGC...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCATGGAACCTTCCTaGCAGGTGCAGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PVSRQGILSIALTRVGTARMEPS*QVQREQ
Trigger: CTGCTCCCTCTGCACCTGCCAGGAAGGTTCCATGCG...AGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCCGCATGGAACCTTCCTaGCAGGTGCAGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSRMEPS*QVQREQ
Trigger: CTGCTCCCTCTGCACCTGCCAGGAAGGTTCCATGCG...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CACTCCTGCCTGGCGACAGTGACTGGCGTAGGCTTCCAGGGCATCACAGAGGCAGGACATGGCTTCTTCTaGCAGCGCATGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: HSCLATVTGVGFQGITEAGHGFF*QRMEPS
Trigger: GGAAGGTTCCATGCGCTGCCAGAAGAAGCCATGTCC...TGCCTCTGTGATGCCCTGGAAGCCTACGCCAGTCACTGTCGCCAGGCAGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTTCCACATGGCCCCGATaGCAGGTGCAGGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPSTWPR*QVQAMH
Trigger: GTGCATCGCCTGCACCTGCCATCGGGGCCATGTGGA...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCATTGGCCTCACGCCTaGCACGGTAACCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPHWPHA*HGNLLP
Trigger: GGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATG...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAATGGCAGCGACTGAATaGGGAGGACTTCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPMAATE*GGLQHP
Trigger: GGGGTGCTGAAGTCCTCCCCATTCAGTCGCTGCCAT...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGGTGGCACCACAGCATaGCAGCGACTGAATGGGGAG +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQGGTTA*QRLNGE
Trigger: CTCCCCATTCAGTCGCTGCCATGCTGTGGTGCCACC...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAAAAGAAGGGCTCCGGTaGCACCACAGCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLKEGLR*HHSMAA
Trigger: CGCTGCCATGCTGTGGTGCCACCGGAGCCCTTCTTT...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAACCTGGCGACAGTGACTaGCGTAGGCTTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQPGDSD*RRLPGH
Trigger: ATGCCCTGGAAGCCTACGCCAGTCACTGTCGCCAGG...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGCGAGCACCAAGTGGCTaGTCTCCAGTGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWRAPSG*SPVSRT
Trigger: AGTCCTGCTCACTGGAGACCAGCCACTTGGTGCTCG...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCGGGCCGAGCACCAAGTaGCTGGTCTCCAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVGPSTK*LVSSEQ
Trigger: CTGCTCACTGGAGACCAGCCACTTGGTGCTCGGCCC...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGTATCAGGCACTGTCCTaGCTCAGGGTGTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWYQALS*LRVSPG
Trigger: CCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATA...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGTATCAGGCACTGTCCTaGCTCAGGGTGTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWYQALS*LRVSPG
Trigger: CCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATA...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGGGGTCGCCTTCCCTTCAAGGGCATCTTaGGAAGGCAGGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LCFQGPAGVPRMAMGVAFPSRAS*EGRFWE
Trigger: CTCCCAAAACCTGCCTTCCCAAGATGCCCTTGAAGG...GAAGGCGACCCCCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp TCGCCTTTGATCATGCTCTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTGGGGGCAGTGGCGGTTCCTaGCGATGTGGAGGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: SPLIMLCVSVVVLLRRFGGSGGS*RCGGVP
Trigger: TGGAACGCCTCCACATCGCCAGGAACCGCCACTGCC...CCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAGAGCATGATCAAAGGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CAA 72 bp GCCTCTCCGGGAGCCACCTCCCAGGCTTGTGAGATATaGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ASPGATSQACEI*PSQDRSIFFPG
Trigger: TCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGAGGTGGCTCCCGGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
3UTR CAA 72 bp TTTGCCACCGCCGGTGCCGACCTTTGTGGCTCGCCTTaGATCATGCTCTGCGTCAGCGTGGTAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FATAGADLCGSP*IMLCVSVVVLL
Trigger: GAGAAGGACTACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCGGTGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCCTGGGCAAAGCCATTaGAGTTCCCACAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQPGQSH*SSHRAH
Trigger: GTGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGG...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAAGCTGGACAGGAAGGTaGCCCCCTCCTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDESWTGR*PPPHKA
Trigger: AGCTTTATGAGGAGGGGGTCACCTTCCTGTCCAGCT...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAATGGCCATGTTCCCAGTaGGAGCCACCTTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQWPCSQ*EPPSVQ
Trigger: CTGCACAGAAGGTGGCTCTCACTGGGAACATGGCCA...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGAAGGTCTCCTGGCTCTaGTACTGGTGTCCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGKVSWL*YWCPWY
Trigger: GTACCAGGGACACCAGTATCAGAGCCAGGAGACCTT...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTCCCGCTCTTGGAGTCTaGAGGTCTCCTGGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTPALGV*RSPGSD
Trigger: ATCAGAGCCAGGAGACCTTCAGACTCCAAGAGCGGG...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGCCCGCTCTTGGAGTCTaGAGGTCTCCTGGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALPALGV*RSPGSD
Trigger: ATCAGAGCCAGGAGACCTTCAGACTCCAAGAGCGGG...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCTTGGGTACCCCATCTTaGCAGACGCAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVLGTPS*QTQAVQ
Trigger: CTGCACCGCCTGCGTCTGTCAAGATGGGGTACCCAA...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GAGTTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCATCACAGTCAGAGCATTaGGGACAGCAGTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: EFTAGDSTWRGSLQGRGPSQSEH*GQQSWG
Trigger: GCCCCATGACTGCTGTCCTCAATGCTCTGACTGTGA...TGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp GGCCTGATGAACCCTTATCAGGCACTGTCCTGGCTCAGGGTGTCTCCTGGGGCTTCACAGTCAGAGCATTaGGGACAGCAGTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: GLMNPYQALSWLRVSPGASQSEH*GQQSWG
Trigger: GCCCCATGACTGCTGTCCTCAATGCTCTGACTGTGA...AGCCCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATAAGGGTTCATCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR TCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGTCACAGTCAGAGCATTaGGGACAGCAGTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWSQSEH*GQQSWG
Trigger: GCCCCATGACTGCTGTCCTCAATGCTCTGACTGTGA...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCCCAGCAGGCCCTCTaGACAGTTACTCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCSQQAL*TVTQGL
Trigger: GAGGCCTTGAGTAACTGTTCAGAGGGCCTGCTGGGA...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTCCCAGCAGGCCCTCTaGACAGTTACTCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TARQGETPGLMNPYQALSSQQAL*TVTQGL
Trigger: GAGGCCTTGAGTAACTGTTCAGAGGGCCTGCTGGGA...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCCCAGCAGGCCCTCTaGACAGTTACTCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSSQQAL*TVTQGL
Trigger: GAGGCCTTGAGTAACTGTTCAGAGGGCCTGCTGGGA...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAACAGCATGGCAGCGACTaGATGGGGAGGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQQHGSD*MGRTSA
Trigger: TGCTGAAGTCCTCCCCATTCAGTCGCTGCCATGCTG...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCAAGCAGTTGAGCTCTaGACACGAGGGCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPQAVEL*TRGPLA
Trigger: TGCCAGGGGCCCTCGTGTTCAGAGCTCAACTGCTTG...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACATAGCTGCAACTaGCCTGGAAGTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQAHSCN*PGSAAG
Trigger: GCCTGCTGCACTTCCAGGGCAGTTGCAGCTATGTGC...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGGGCCCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGTGCCTCACCCTCGTCTaGAGGTCCTTATTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GAQAPVSRQGILSIALTRCLTLV*RSLFCS
Trigger: AGAACAGAATAAGGACCTGCAGACGAGGGTGAGGCA...CCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp CCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAGAAGGTCTCCCCGTTaGCGTAGGTCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: PGSSVQAGHSLHSPNQGGRRSPR*RRSGHF
Trigger: AAAATGGCCAGACCTACGGCAACGGGGAGACCTTCT...CCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGGCTCCTCAGGCAGGTaGACTGTAGACAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQGSSGR*TVDKGW
Trigger: CCAACCCTTGTCTACAGTGCACCTGCCTGAGGAGCC...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCTCCTCAGGCAGGTaGACTGTAGACAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSGSSGR*TVDKGW
Trigger: CCAACCCTTGTCTACAGTGCACCTGCCTGAGGAGCC...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGACAGGTACACAGGTTaGAGGGTTCTCGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLDRYTG*RVLGGL
Trigger: CAGACCCCCGAGAACCCTGCAACCTGTGTACCTGTC...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGGACACCACTCACAGCTaGCTGCTGGTCCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWDTTHS*LLVPQT
Trigger: AGTTTGAGGGACCAGCAGGCAGCTGTGAGTGGTGTC...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGACAAGCCTGGTGGATaGAGAGCCATGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRDKPGG*RAMSGP
Trigger: AGGACCTGACATGGCTCTGCATCCACCAGGCTTGTC...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAGACAAGCCTGGTGGATaGAGAGCCATGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEDKPGG*RAMSGP
Trigger: AGGACCTGACATGGCTCTGCATCCACCAGGCTTGTC...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGCCCCTCTGAGACCTaGCAGCTATTCCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPSPSET*QLFPNA
Trigger: TGCGTTTGGGAATAGCTGGCAGGTCTCAGAGGGGCT...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGAGCCCCTCTGAGACCTaGCAGCTATTCCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: ARQGETPGLMNPYQALSWSPSET*QLFPNA
Trigger: TGCGTTTGGGAATAGCTGGCAGGTCTCAGAGGGGCT...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGAGAGCCGTCACCTGCTaGGCCGCGCTTAAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LVRYCLPKTAASSSLDSGRAVTC*AALKPA
Trigger: TGCGGGCTTAAGCGCGGCGCAGCAGGTGACGGCTCT...CCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp CTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGAGCTCCAGCAGCCGCTaGAGAGCCGTCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVRYCLPKTAASSSLDSGSSSSR*RAVTCC
Trigger: GCAGCAGGTGACGGCTCTGCAGCGGCTGCTGGAGCT...CCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCCATGCAGGAGCAGCTaGTGCAGGTGTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPPCRSS*CRCPQS
Trigger: GGACTGTGGACACCTGCACCAGCTGCTCCTGCATGG...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCTGGGGAGATGCAGGGTaGCACTCACAGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVWGDAG*HSQDSS
Trigger: GCTGGAGTCCTGTGAGTGCCACCCTGCATCTCCCCA...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGGGCAGAGGCTCACACTaGACACTCCCATTAGCACAG +
Preference number: 4 (lower is better)
Translates to: SLHSPNQGGNCSPRGDSWGRGSH*TLPLAQ
Trigger: CTGTGCTAATGGGAGTGTCCAGTGTGAGCCTCTGCC...CCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGCCATCAGGCTCCCACTaGACTCCCTCAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLPSGSH*TPSANS
Trigger: GGAGTTTGCTGAGGGAGTCCAGTGGGAGCCTGATGG...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCACCATCAGGCTCCCACTaGACTCCCTCAGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSPSGSH*TPSANS
Trigger: GGAGTTTGCTGAGGGAGTCCAGTGGGAGCCTGATGG...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTCCAGGATGCAGTCTaGGCACCTGGGGCAACACTG +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVLQDAV*APGATL
Trigger: CAGTGTTGCCCCAGGTGCCCAGACTGCATCCTGGAG...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGAAGTCCGCTCCGCTaGGGTACTCTTTCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPGSPLR*GTLSRQ
Trigger: TTGGCGGGAAAGAGTACCCCAGCGGAGCGGACTTCC...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAGGGTTCTCGGGGGTCTaGGAACTCCTGGTTACTCAG +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLGFSGV*ELLVTQ
Trigger: CTGAGTAACCAGGAGTTCCCAGACCCCCGAGAACCC...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCGCAGGTAGGGTCAAGTaGGTCAGGAAGGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCAGRVK*VRKGLS
Trigger: GGAGAGACCCTTCCTGACCCACTTGACCCTACCTGC...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGAGAGCTGGGGGACATaGCTTCTTCTGGCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSESWGT*LLLAAH
Trigger: ATGCGCTGCCAGAAGAAGCCATGTCCCCCAGCTCTC...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCGAGAGCTGGGGGACATaGCTTCTTCTGGCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSESWGT*LLLAAH
Trigger: ATGCGCTGCCAGAAGAAGCCATGTCCCCCAGCTCTC...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGAGCTGATGCACTaGATGCGTGCACAGGTGACG +
Preference number: 4 (lower is better)
Translates to: VSRQGILSIALTRVGTARQELMH*MRAQVT
Trigger: CGTCACCTGTGCACGCATCCAGTGCATCAGCTCTTG...GCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACAAGAGCTGATGCACTaGATGCGTGCACAGGTGACG +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEQELMH*MRAQVT
Trigger: CGTCACCTGTGCACGCATCCAGTGCATCAGCTCTTG...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAATGGCAGCGACTGAATaGGGAGGACTTCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSMAATE*GGLQHP
Trigger: GGGGTGCTGAAGTCCTCCCCATTCAGTCGCTGCCAT...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCCGAGCACCAAGTGGCTaGTCTCCAGTGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSRAPSG*SPVSRT
Trigger: AGTCCTGCTCACTGGAGACCAGCCACTTGGTGCTCG...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAATATCAGGCACTGTCCTaGCTCAGGGTGTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQYQALS*LRVSPG
Trigger: CCCAGGAGACACCCTGAGCCAGGACAGTGCCTGATA...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGGGAGCCCTTGGGCTCTaGCCCCCGTGTGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: LVRYCLPKTAASSSLDSGGALGL*PPCVFT
Trigger: GGTGAAGACACACGGGGGCCAGAGCCCAAGGGCTCC...CCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCGTTCCCAGCAAGGACTaGGGAATGGGCAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCVPSKD*GMGSCL
Trigger: CAGACAACTGCCCATTCCTCAGTCCTTGCTGGGAAC...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTTCCCAGCAAGGACTaGGGAATGGGCAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTVPSKD*GMGSCL
Trigger: CAGACAACTGCCCATTCCTCAGTCCTTGCTGGGAAC...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGAGCTGGACAGGAAGGTaGCCCCCTCCTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALSWTGR*PPPHKA
Trigger: AGCTTTATGAGGAGGGGGTCACCTTCCTGTCCAGCT...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAAAGGTCTCCTGGCTCTaGTACTGGTGTCCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLKVSWL*YWCPWY
Trigger: GTACCAGGGACACCAGTATCAGAGCCAGGAGACCTT...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCAGAGTTTACTGCTGGTaGCTCAACATGGCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSRVYCW*LNMAGV
Trigger: GACCCCCGCCATGTTGAGTCACCAGCAGTAAACTCT...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR TCA 90 bp TCGCCTTTGATCATGCTCTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTGGGCAGGGGTCCCGGGAGTaGGCTTTCTTTTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPLIMLCVSVVVLLRRFGQGSRE*AFFSGS
Trigger: AGACCCAGAAAAGAAAGCTCACTCCCGGGACCCCTG...CCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAGAGCATGATCAAAGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp TTCGCAGGCACGGGATCCTCAGCACCAGGGGAACACAGTAGTTCCAGGAAGTTCTCTGAGGAGCATCTTTaGTCTCGCCCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FAGTGSSAPGEHSSSRKFSEEHL*SRPRRP
Trigger: AGGCCTCCTGGGGCGAGATCAAAGATGCTCCTCAGA...GAACTTCCTGGAACTACTGTGTTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGTCATCATTGGTCACGTaGACACTGAAGTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRSSLVT*TLKSPL
Trigger: CAGCGGGGACTTCAGTGTGCACGTGACCAATGATGA...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGAAGGTCTCCCCGTTaGCGTAGGTCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPRRSPR*RRSGHF
Trigger: AAAATGGCCAGACCTACGGCAACGGGGAGACCTTCT...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGAGAAGGTCTCCCCGTTaGCGTAGGTCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: RQGILSIALTRVGTARQGRRSPR*RRSGHF
Trigger: AAAATGGCCAGACCTACGGCAACGGGGAGACCTTCT...CCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCGGCTCCTCAGGCAGGTaGACTGTAGACAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVGSSGR*TVDKGW
Trigger: CCAACCCTTGTCTACAGTGCACCTGCCTGAGGAGCC...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTATGGCAAGGGCTGTCTaGATCCGTGAAGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PVSRQGILSIALTRVGTAMARAV*IREVLP
Trigger: GGGCAGAACTTCACGGATGCAGACAGCCCTTGCCAT...AGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR GCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTATGGCAAGGGCTGTCTaGATCCGTGAAGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETMARAV*IREVLP
Trigger: GGGCAGAACTTCACGGATGCAGACAGCCCTTGCCAT...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGACAAGCCTGGTGGATaGAGAGCCATGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQDKPGG*RAMSGP
Trigger: AGGACCTGACATGGCTCTGCATCCACCAGGCTTGTC...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGAGCCCCTCTGAGACCTaGCAGCTATTCCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: GTARQGETPGLMNPYQALSPSET*QLFPNA
Trigger: TGCGTTTGGGAATAGCTGGCAGGTCTCAGAGGGGCT...CAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACCGAAAAACTGGGCCTaGGGTGGCCAGAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SQACEILPSQDRSIFFPGPKNWA*GGQKRP
Trigger: GGGCCTCTTCTGGCCACCCCAGGCCCAGTTTTTCGG...TCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp CCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTGCAAGGACTGAGGAATaGGCAGTTGTCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PVSRQGILSIALTRVGTAARTEE*AVVCCP
Trigger: TGGGCAGCAGACAACTGCCCATTCCTCAGTCCTTGC...AGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAGCAAGGACTGAGGAATaGGCAGTTGTCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLARTEE*AVVCCP
Trigger: TGGGCAGCAGACAACTGCCCATTCCTCAGTCCTTGC...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCAAGGACTGAGGAATaGGCAGTTGTCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSARTEE*AVVCCP
Trigger: TGGGCAGCAGACAACTGCCCATTCCTCAGTCCTTGC...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCGGGTTCTCGGGGGTCTaGGAACTCCTGGTTACTCAG +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVGFSGV*ELLVTQ
Trigger: CTGAGTAACCAGGAGTTCCCAGACCCCCGAGAACCC...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCGGACATGGCTTCTTCTaGCAGCGCATGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCGHGFF*QRMEPS
Trigger: GGAAGGTTCCATGCGCTGCCAGAAGAAGCCATGTCC...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGGACATGGCTTCTTCTaGCAGCGCATGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: RVGTARQGETPGLMNPYQGHGFF*QRMEPS
Trigger: GGAAGGTTCCATGCGCTGCCAGAAGAAGCCATGTCC...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCAAGAGCTGATGCACTaGATGCGTGCACAGGTGACG +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETQELMH*MRAQVT
Trigger: CGTCACCTGTGCACGCATCCAGTGCATCAGCTCTTG...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTCGAGCACCAAGTGGCTaGTCTCCAGTGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPRAPSG*SPVSRT
Trigger: AGTCCTGCTCACTGGAGACCAGCCACTTGGTGCTCG...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGAGGTGTCCATCCTTGGTaGTCTTTGAAGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CWEGRALLRRHGILSTRGGVHPW*SLKFCS
Trigger: AGAGCAGAACTTCAAAGACCACCAAGGATGGACACC...TCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp TTCGCAGGCACGGGATCCTCAGCACCAGGGGAACACAGTAGTTCCAGGAAGTTCTTCTTCCCTGGACTCTaGGGACTCGCCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FAGTGSSAPGEHSSSRKFFFPGL*GLAFPW
Trigger: CCAGGGAAAGGCGAGTCCCCAGAGTCCAGGGAAGAA...GAACTTCCTGGAACTACTGTGTTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp GCACTTAGGACTAAATTCTCTTCGACTCCTCCCTCTGACCCTGAGGAGCCCTTGCAGGAGTCCCTCGGATaGCTATGGGGGTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ALRTKFSSTPPSDPEEPLQESLG*LWGSPS
Trigger: GGAAGGCGACCCCCATAGCCATCCGAGGGACTCCTG...CAAGGGCTCCTCAGGGTCAGAGGGAGGAGTCGAAGAGAATTTAGTCCTAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR TCA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCTTATTCTGTTCTCTaGGCTCCATCACTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEPYSVL*APSLQP
Trigger: AGGCTGCAGTGATGGAGCTCAGAGAACAGAATAAGG...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGCCTTATTCTGTTCTCTaGGCTCCATCACTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QGILSIALTRVGTARQGEPYSVL*APSLQP
Trigger: AGGCTGCAGTGATGGAGCTCAGAGAACAGAATAAGG...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR TCA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCGGCTGTCTGCATCCGTaGAGTTCTGCCCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVGCLHP*SSAHWH
Trigger: ATGCCAATGGGCAGAACTTCACGGATGCAGACAGCC...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp CTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCTTTGGAGTCTGTGCTTTCAGGCCTTTGATCATGCTCTaGGTCAGCGTGGTAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LRRFGLSLPTGFGVCAFRPLIML*VSVVVL
Trigger: AAGGACTACCACGCTGACGCAGAGCATGATCAAAGG...CCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGGAGAGCCCAAACCTCCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAACCCTGCAGATCGTCCTaGGCAAAGCCATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQPCRSS*AKPLKF
Trigger: GAACTTCAATGGCTTTGCCCAGGACGATCTGCAGGG...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCACCCTGCAGATCGTCCTaGGCAAAGCCATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSPCRSS*AKPLKF
Trigger: GAACTTCAATGGCTTTGCCCAGGACGATCTGCAGGG...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp AGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGCCCTGCAGATCGTCCTaGGCAAAGCCATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RLWSLCFQGPAGVPRMAMPCRSS*AKPLKF
Trigger: GAACTTCAATGGCTTTGCCCAGGACGATCTGCAGGG...CATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCAGAGGCTCACACTaGACACTCCCATTAGCACAG +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPGRGSH*TLPLAQ
Trigger: CTGTGCTAATGGGAGTGTCCAGTGTGAGCCTCTGCC...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp GGCCTAGAGTTTACTGCTGGTGACTCAACATGGCGGGGGTCTTTGCAGGGCAGGCCAAGGGGAGACTCCTaGCCTGATGAACCCTTATCA +
Preference number: 4 (lower is better)
Translates to: GLEFTAGDSTWRGSLQGRPRGDS*PDEPLS
Trigger: TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGG...CCTGCCCTGCAAAGACCCCCGCCATGTTGAGTCACCAGCAGTAAACTCTAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CCA 90 bp CATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCCCAAGGGGAGACTCCTaGCCTGATGAACCCTTATCA +
Preference number: 4 (lower is better)
Translates to: HSLHSPNQGGNCSPRGDSPRGDS*PDEPLS
Trigger: TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGG...GGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp TTGTGGCTCGCCTTTGATCATGCTCTGCGTCAGCGTGGTAGTCCTTCTCCGGAGCAGCATCTTCTTCCCTaGACTCTGGGGACTCGCCTT +
Preference number: 4 (lower is better)
Translates to: LWLAFDHALRQRGSPSPEQHLLP*TLGTRL
Trigger: AAGGCGAGTCCCCAGAGTCCAGGGAAGAAGATGCTG...CTCCGGAGAAGGACTACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp ATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTTCATCATTGGTCACGTaGACACTGAAGTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ILSIALTRVGTARQGETPSSLVT*TLKSPL
Trigger: CAGCGGGGACTTCAGTGTGCACGTGACCAATGATGA...AGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTTGCCTCACCCTCGTCTaGAGGTCCTTATTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETCLTLV*RSLFCS
Trigger: AGAACAGAATAAGGACCTGCAGACGAGGGTGAGGCA...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATGCCTCACCCTCGTCTaGAGGTCCTTATTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLCLTLV*RSLFCS
Trigger: AGAACAGAATAAGGACCTGCAGACGAGGGTGAGGCA...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGCATCCGTGAAGTTCTaGCCATTGGCATACACTTGG +
Preference number: 4 (lower is better)
Translates to: SRQGILSIALTRVGTARQASVKF*PLAYTW
Trigger: CCAAGTGTATGCCAATGGGCAGAACTTCACGGATGC...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTGCATCCGTGAAGTTCTaGCCATTGGCATACACTTGG +
Preference number: 4 (lower is better)
Translates to: GILSIALTRVGTARQGETASVKF*PLAYTW
Trigger: CCAAGTGTATGCCAATGGGCAGAACTTCACGGATGC...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR GCA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGCATCCGTGAAGTTCTaGCCATTGGCATACACTTGG +
Preference number: 4 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLASVKF*PLAYTW
Trigger: CCAAGTGTATGCCAATGGGCAGAACTTCACGGATGC...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CCA 90 bp CGGTGCCGACCTTTGTGGCTCGCCTTTGATCATGCTCTGCGTCAGCGTGGTAGTAGGGGTGTCCATCCTTaGTGGTCTTTGAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RCRPLWLAFDHALRQRGSRGVHP*WSLKFC
Trigger: GCAGAACTTCAAAGACCACCAAGGATGGACACCCCT...ACTACCACGCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAGGTCGGCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp CACTTAGGACTAAATTCTCTTCGACTCCTCCCTCTGACCCTGAGGAGCCCTTGGTGGTCTTTGAAGTTCTaGTCTCTCCTGGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: HLGLNSLRLLPLTLRSPWWSLKF*SLLAQV
Trigger: CACCTGGGCCAGGAGAGAGCAGAACTTCAAAGACCA...CCAAGGGCTCCTCAGGGTCAGAGGGAGGAGTCGAAGAGAATTTAGTCCTAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR GCA 90 bp TCCCAGGCTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGAAGGCTTGTGAGATATTaGCTTCCCAAGACCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQACEILPSQDRSIFFPGRLVRY*LPKTAA
Trigger: TGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCT...TCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CAA 90 bp CTTCAAGGCCTTGGGACGCTCAGGGCCGCCCCACCCGACCCCGGAGGGCACCCGAAGCCCGCAGGCGCCTaGGCGGTGCTGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: LQGLGTLRAAPPDPGGHPKPAGA*AVLRGA
Trigger: GGCGCCCCTCAGCACCGCCAAGGCGCCTGCGGGCTT...CGGGTGCCCTCCGGGGTCGGGTGGGGCGGCCCTGAGCGTCCCAAGGCCTTGAAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CAA 90 bp ACTCCAGGGCCCTGCAGCCCGTGCGGATCGCGCTCCAGGCCTGGGGGCCCCGGACTCCTGTGGCGGGAGTaGAGCCGGACTGGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: TPGPCSPCGSRSRPGGPGLLWRE*SRTGRE
Trigger: CTCCCGCCCAGTCCGGCTCAACTCCCGCCACAGGAG...TCCGGGGCCCCCAGGCCTGGAGCGCGATCCGCACGGGCTGCAGGGCCCTGGAGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS CCA 90 bp GACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTaGCGATGTGGAGGCGTTCCAGGACCTCGGCGCGCAGGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: DWAGAPRGEPGSGGS*RCGGVPGPRRAGSL
Trigger: CAGCGACCCTGCGCGCCGAGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCCGCCCAGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 90 bp CTGGACAGGGCAGCGGCACGCAGCGGCGGGCCAGGCACTGCACGTTaGCGCTCAGACAGCGACACAGACGGCAGGGGTCAGAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LDRAAARSGGPGTAR*RSDSDTDGRGQRGG
Trigger: CCCACCCCTCTGACCCCTGCCGTCTGTGTCGCTGTCTGAGCGGCAACGTGCAGTGCCTGGCCCGCCGCTGCGTGCCGCTGCCCTGTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 90 bp AGCTCCCAGCAGGCAGCCCACCCAGACTCGCCCTGGAGCCGCACCTaGAGCCCGGGCTGGGCGTGCAGGATCACAGTGTGTCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: SSQQAAHPDSPWSRT*SPGWACRITVCPRS
Trigger: GCTGCGAGGACACACTGTGATCCTGCACGCCCAGCCCGGGCTCCAGGTGCGGCTCCAGGGCGAGTCTGGGTGGGCTGCCTGCTGGGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS CCA 90 bp GGGGCCTTGTCGGGGCCACACGAGAGCGGTGAGCAGCGCTGGCTCTaGCAACGCACGGTGCCCGCCATGCAGGAGCAGCTGGTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GALSGPHESGEQRWL*QRTVPAMQEQLVQV
Trigger: CACCTGCACCAGCTGCTCCTGCATGGCGGGCACCGTGCGTTGCCAGAGCCAGCGCTGCTCACCGCTCTCGTGTGGCCCCGACAAGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 90 bp AGGGCAGGGGCCTTGTCGGGGCCACACGAGAGCGGTGAGCAGCGCTaGCTCTGGCAACGCACGGTGCCCGCCATGCAGGAGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RAGALSGPHESGEQR*LWQRTVPAMQEQLV
Trigger: CACCAGCTGCTCCTGCATGGCGGGCACCGTGCGTTGCCAGAGCCAGCGCTGCTCACCGCTCTCGTGTGGCCCCGACAAGGCCCCTGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS-3UTR CAA 90 bp TGGGGCTCCCGGCTGGGGCTGGGCCGAGCACCAAGTGGCTGGTCTCCAGTGAGCGCAGGGGCACATGCCTaGGGCTCGCAGCTCACGCTG +
Preference number: 5 (lower is better)
Translates to: WGSRLGLGRAPSGWSPVSAGAHA*GSQLTL
Trigger: CAGCGTGAGCTGCGAGCCCAAGGCATGTGCCCCTGC...GCTCACTGGAGACCAGCCACTTGGTGCTCGGCCCAGCCCCAGCCGGGAGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS GCA 90 bp ACAGGCTCTGGACAGGGCAGCGGCACGCAGCGGCGGGCCAGGCACTaGACGTTGCCGCTCAGACAGCGACACAGACGGCAGGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: TGSGQGSGTQRRARH*TLPLRQRHRRQGSE
Trigger: CTCTGACCCCTGCCGTCTGTGTCGCTGTCTGAGCGGCAACGTGCAGTGCCTGGCCCGCCGCTGCGTGCCGCTGCCCTGTCCAGAGCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS GCA 90 bp GTGTCCACAGTCCAGCGCTCTCCAGAGGCCACCTCACGGCCCTGGTaGACGCAGGACTGGGTGGGAGCCCGGCATACGGGGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VSTVQRSPEATSRPW*TQDWVGARHTGQQL
Trigger: GAGCTGCTGCCCCGTATGCCGGGCTCCCACCCAGTCCTGCGTGCACCAGGGCCGTGAGGTGGCCTCTGGAGAGCGCTGGACTGTGGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 90 bp GCAGCAGCTCCCCCGCTCGGTGACCTGGAGCTTGCAGGGAAGGGGTaGGCACTGCAGCCGCACACAGCTGACCTGGCCAGCCTGACAGCG +
Preference number: 5 (lower is better)
Translates to: AAAPPLGDLELAGKG*ALQPHTADLASLTA
Trigger: CGCTGTCAGGCTGGCCAGGTCAGCTGTGTGCGGCTGCAGTGCCCACCCCTTCCCTGCAAGCTCCAGGTCACCGAGCGGGGGAGCTGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 90 bp AGGCAGCCTCTGCAGCGAGGGCAGCAGCTCCCCCGCTCGGTGACCTaGAGCTTGCAGGGAAGGGGTGGGCACTGCAGCCGCACACAGCTG +
Preference number: 5 (lower is better)
Translates to: RQPLQRGQQLPRSVT*SLQGRGGHCSRTQL
Trigger: CAGCTGTGTGCGGCTGCAGTGCCCACCCCTTCCCTGCAAGCTCCAGGTCACCGAGCGGGGGAGCTGCTGCCCTCGCTGCAGAGGCTGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 90 bp CAGGTGTCCACAGTCCAGCGCTCTCCAGAGGCCACCTCACGGCCCTaGTGCACGCAGGACTGGGTGGGAGCCCGGCATACGGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QVSTVQRSPEATSRP*CTQDWVGARHTGQQ
Trigger: CTGCTGCCCCGTATGCCGGGCTCCCACCCAGTCCTGCGTGCACCAGGGCCGTGAGGTGGCCTCTGGAGAGCGCTGGACTGTGGACACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS-3UTR CAA 90 bp GCAGGGCGCGCCGCCGCCCAGCCGCGTCCTCCTGTGGCGGGAGTTGAGCCGGACCTTTGTGGCTCGCCTTaGATCATGCTCTGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: AGRAAAQPRPPVAGVEPDLCGSP*IMLCVS
Trigger: GCTGACGCAGAGCATGATCAAAGGCGAGCCACAAAG...GTCCGGCTCAACTCCCGCCACAGGAGGACGCGGCTGGGCGGCGGCGCGCCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS GCA 90 bp GCTGGCTCTGGCAACGCACGGTGCCCGCCATGCAGGAGCAGCTGGTaGAGGTGTCCACAGTCCAGCGCTCTCCAGAGGCCACCTCACGGC +
Preference number: 5 (lower is better)
Translates to: AGSGNARCPPCRSSW*RCPQSSALQRPPHG
Trigger: GCCGTGAGGTGGCCTCTGGAGAGCGCTGGACTGTGGACACCTGCACCAGCTGCTCCTGCATGGCGGGCACCGTGCGTTGCCAGAGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS GCA 90 bp GGCCACACGAGAGCGGTGAGCAGCGCTGGCTCTGGCAACGCACGGTaGCCGCCATGCAGGAGCAGCTGGTGCAGGTGTCCACAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GHTRAVSSAGSGNAR*PPCRSSWCRCPQSS
Trigger: GCTGGACTGTGGACACCTGCACCAGCTGCTCCTGCATGGCGGGCACCGTGCGTTGCCAGAGCCAGCGCTGCTCACCGCTCTCGTGTGGCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 90 bp GGCAGCAGGTGCCTGGGAGGGGCCGGGCTGGGTATGGACACAGGCTaGCACATTCTCGCTGGCGGCACTGGATGTGACCCTCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: GSRCLGGAGLGMDTG*HILAGGTGCDPPGT
Trigger: GGTGCCTGGAGGGTCACATCCAGTGCCGCCAGCGAGAATGTGCCAGCCTGTGTCCATACCCAGCCCGGCCCCTCCCAGGCACCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 90 bp GGGCGAGGCTGGCAGTGGGCATGGCCTTCCTGGCATCGGCACTCCTaGCAGGGGTCTCGGGGGTGGGAGAAGCTCTCGCCGTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: GRGWQWAWPSWHRHS*QGSRGWEKLSPSTN
Trigger: GTTTGTGGACGGCGAGAGCTTCTCCCACCCCCGAGACCCCTGCCAGGAGTGCCGATGCCAGGAAGGCCATGCCCACTGCCAGCCTCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 90 bp GCCTTGGGCTCGCAGCTCACGCTGCCCTCCCAGCAAAGGCAGAGGTaGCAGGCAGCAGTGGGCGATGGGAAGCGCTCCCCGCTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: ALGSQLTLPSQQRQR*QAAVGDGKRSPLAN
Trigger: GTTTGCCAGCGGGGAGCGCTTCCCATCGCCCACTGCTGCCTGCCACCTCTGCCTTTGCTGGGAGGGCAGCGTGAGCTGCGAGCCCAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS-3UTR CAA 90 bp CTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGGCGGCCTTCAAGGCCTaGGGACGCTCAGGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LRQRGSPSPEVWALPAHRAAFKA*GRSGPP
Trigger: GGGCGGCCCTGAGCGTCCCAAGGCCTTGAAGGCCGC...CCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CAA 90 bp CGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCCGGAGCCGCTGCCCTCTCCCGATGCATTaGCTCCAGCTGCTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: RQWRFLAMWRRSRTRSRCPLPMH*LQLLPQ
Trigger: CTGCGGGAGCAGCTGGAGCAAATGCATCGGGAGAGG...GCAGCGGCTCCGGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS GCA 90 bp GGGCCCTTGGCGGGGCTGGGCGCAAGAGCTGATGCACTGGATGCGTaGACAGGTGACGACGCCCTCGTGACACACACAGGAGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GPLAGLGARADALDA*TGDDALVTHTGGAG
Trigger: GCCTGCTCCTCCTGTGTGTGTCACGAGGGCGTCGTCACCTGTGCACGCATCCAGTGCATCAGCTCTTGCGCCCAGCCCCGCCAAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS GCA 90 bp GGCACTCCACATGGCCCCGATGGCAGGTGCAGGCGATGCACGCATTaGTGGGGTCCCGCCAGCTCTCTCCATCTGCCACTCTCCGGCCCT +
Preference number: 5 (lower is better)
Translates to: GTPHGPDGRCRRCTH*WGPASSLHLPLSGP
Trigger: AGGGCCGGAGAGTGGCAGATGGAGAGAGCTGGCGGGACCCCAGCAATGCGTGCATCGCCTGCACCTGCCATCGGGGCCATGTGGAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CAA 90 bp GAGTTGAGCCGGACTGGGCGGGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCCTGCCCACAGGCTTaGGAGTCTGTGCTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: ELSRTGREPHGVNPAVAVPCPQA*ESVLSG
Trigger: CCCTGAAAGCACAGACTCCAAAGCCTGTGGGCAGGG...AACCGCCACTGCCGGGTTCACCCCGTGGGGCTCCCGCCCAGTCCGGCTCAACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS GCA 90 bp GTGTCCACAGTCCAGCGCTCTCCAGAGGCCACCTCACGGCCCTGGTaGACGCAGGACTGGGTGGGAGCTTGGCATCGCTCACAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VSTVQRSPEATSRPW*TQDWVGAWHRSQQL
Trigger: CAGCTGCTGTGAGCGATGCCAAGCTCCCACCCAGTCCTGCGTGCACCAGGGCCGTGAGGTGGCCTCTGGAGAGCGCTGGACTGTGGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492679.5
ENST00000610776.4
CDS CCA 90 bp CAGGTGTCCACAGTCCAGCGCTCTCCAGAGGCCACCTCACGGCCCTaGTGCACGCAGGACTGGGTGGGAGCTTGGCATCGCTCACAGCAG +
Preference number: 5 (lower is better)
Translates to: QVSTVQRSPEATSRP*CTQDWVGAWHRSQQ
Trigger: CTGCTGTGAGCGATGCCAAGCTCCCACCCAGTCCTGCGTGCACCAGGGCCGTGAGGTGGCCTCTGGAGAGCGCTGGACTGTGGACACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492679.5
ENST00000610776.4
CDS-3UTR CAA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCGCAGTCATGGGGCCCTaGGCGGGGCTGGGCGCAAGA +
Preference number: 5 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPAVMGP*AGLGAR
Trigger: TCTTGCGCCCAGCCCCGCCAAGGGCCCCATGACTGC...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTACCCCACACCGGGCATaGGCCTCACGCCTGGCACGG +
Preference number: 5 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPTPHRA*ASRLAR
Trigger: CCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGT...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS TCA 90 bp CGGCAGGGGTCCCCAGGTGTTGTCCACTCTTGGCCATGTTCCCAGTaGGAGCCACCTTCTGTGCAGCCCTCCGTGTCAGGGCCACGCCTG +
Preference number: 5 (lower is better)
Translates to: RQGSPGVVHSWPCSQ*EPPSVQPSVSGPRL
Trigger: CAGGCGTGGCCCTGACACGGAGGGCTGCACAGAAGGTGGCTCTCACTGGGAACATGGCCAAGAGTGGACAACACCTGGGGACCCCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616669.4
CDS GCA 90 bp GAGGATGCAGCCTGTGCTACCACCTGGCTGACAGCACTGGCTCCATaGTTGCTGGGCCTGGCCCCTCGGACCGAAAAACTGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: EDAACATTWLTALAP*LLGLAPRTEKLGLG
Trigger: CCCCAGGCCCAGTTTTTCGGTCCGAGGGGCCAGGCCCAGCAAGCATGGAGCCAGTGCTGTCAGCCAGGTGGTAGCACAGGCTGCATCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000676717.1
CDS CCA 90 bp CCGGCTCCACTCCATCTGCAGCAGTACAGGGGGCAGCTCCAGCCCTaGGGGATACCCGCGGCCCTCTTGCACCTGCCAGCTATTCCCAAA +
Preference number: 5 (lower is better)
Translates to: PAPLHLQQYRGQLQP*GIPAALLHLPAIPK
Trigger: TTTGGGAATAGCTGGCAGGTGCAAGAGGGCCGCGGGTATCCCCCAGGGCTGGAGCTGCCCCCTGTACTGCTGCAGATGGAGTGGAGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000460528.1
ENST00000492679.5
ENST00000676619.1
ENST00000678812.1
ENST00000678888.1
ENST00000679229.1
CDS CCA 90 bp GCCTCCAGTCGCCCCAGCCACTCTCGCAGGGGGTGCCACTGCTCCTaGGAGTTCCCAGCAAGGACTGAGGAATGGGCAGTTGTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ASSRPSHSRRGCHCS*EFPARTEEWAVVCC
Trigger: GCAGCAGACAACTGCCCATTCCTCAGTCCTTGCTGGGAACTCCCAGGAGCAGTGGCACCCCCTGCGAGAGTGGCTGGGGCGACTGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000620378.1
CDS CCA 90 bp GCTGACCTGGCCAGCCTGACAGCGACACCACTCACAGCTGCCTGCTaGTCCCTCAAACTCCTCCCCATCCTGGTGCTCCCGGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: ADLASLTATPLTAAC*SLKLLPILVLPALR
Trigger: TCTCAGGGCCGGGAGCACCAGGATGGGGAGGAGTTTGAGGGACCAGCAGGCAGCTGTGAGTGGTGTCGCTGTCAGGCTGGCCAGGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS-3UTR CAA 90 bp CCAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGATGGGGCAGGTGTGCTaGGGGGCCACAGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: PGSSVQAGHSLHSPNQGGMGQVC*GATVSG
Trigger: GCCGCTCACTGTGGCCCCCAAGCACACCTGCCCCAT...CCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CAA 90 bp CTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTATGGGGCAGGTGTGCTaGGGGGCCACAGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: LHSPNQGGNCSPRGDSWPMGQVC*GATVSG
Trigger: GCCGCTCACTGTGGCCCCCAAGCACACCTGCCCCAT...AGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CAACATGGCGGGGGTCTTTGCAGGGCAGGGGCCCAGGCTCCAGTGTCCAGGCAGACAGAGGCCCCGCTCTaGGAGTCTGAAGGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: QHGGGLCRAGAQAPVSRQTEAPL*ESEGLL
Trigger: CAGGAGACCTTCAGACTCCAAGAGCGGGGCCTCTGT...CTGCCTGGACACTGGAGCCTGGGCCCCTGCCCTGCAAAGACCCCCGCCATGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS GCA 90 bp AGGATCACAGTGTGTCCTCGCAGCTCCACATACAGCAGCGGCTCCTaGAGGAAGGGCAAGGCCACCGGGTGCCCATCCACCGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: RITVCPRSSTYSSGS*RKGKATGCPSTVTA
Trigger: GGCAGTCACGGTGGATGGGCACCCGGTGGCCTTGCCCTTCCTGCAGGAGCCGCTGCTGTATGTGGAGCTGCGAGGACACACTGTGATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460528.1
ENST00000492679.5
ENST00000610776.4
ENST00000613019.4
ENST00000620378.1
ENST00000676619.1
ENST00000678888.1
ENST00000679229.1
CDS GCA 90 bp AGCCCTGGGCAAAGACAGATGACAGGAGGAGCTGCCCACAGCTCCTaGATGAGGGCACCTTCTCCTGCTGCCATCCCTGCACTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SPGQRQMTGGAAHSS*MRAPSPAAIPALGP
Trigger: GGGGCCCAGTGCAGGGATGGCAGCAGGAGAAGGTGCCCTCATGCAGGAGCTGTGGGCAGCTCCTCCTGTCATCTGTCTTTGCCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS GCA 90 bp ACTGCAGCCTCCAGTCGCCCCAGCCACTCTCGCAGGGGGTGCCACTaGTCCTGGGAGTTCCCAGCAAGGACTGAGGAATGGGCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: TAASSRPSHSRRGCH*SWEFPARTEEWAVV
Trigger: GACAACTGCCCATTCCTCAGTCCTTGCTGGGAACTCCCAGGAGCAGTGGCACCCCCTGCGAGAGTGGCTGGGGCGACTGGAGGCTGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000620378.1
CDS GCA 90 bp TCCATCACTGCAGCCTCCAGTCGCCCCAGCCACTCTCGCAGGGGGTaGCACTGCTCCTGGGAGTTCCCAGCAAGGACTGAGGAATGGGCA +
Preference number: 5 (lower is better)
Translates to: SITAASSRPSHSRRG*HCSWEFPARTEEWA
Trigger: TGCCCATTCCTCAGTCCTTGCTGGGAACTCCCAGGAGCAGTGGCACCCCCTGCGAGAGTGGCTGGGGCGACTGGAGGCTGCAGTGATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000620378.1
CDS GCA 90 bp GCACAGCCCCGCACTTGGGTACCCCATCTTGACAGACGCAGGCGGTaGAGGGCCGACCATCAGGCTCCCACTGGACTCCCTCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: AQPRTWVPHLDRRRR*RADHQAPTGLPQQT
Trigger: AGTTTGCTGAGGGAGTCCAGTGGGAGCCTGATGGTCGGCCCTGCACCGCCTGCGTCTGTCAAGATGGGGTACCCAAGTGCGGGGCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS GCA 90 bp CCCAGGGGTCCCGGGAGTGAGCTTTCTTTTCTGGGTCTCAGGCTCTaGCTCACTCCTCTCTTCCCTCTGGGCCAGGTCCGGCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PRGPGSELSFLGLRL*LTPLFPLGQVRLLR
Trigger: CCTGAGCAGCCGGACCTGGCCCAGAGGGAAGAGAGGAGTGAGGCAGAGCCTGAGACCCAGAAAAGAAAGCTCACTCCCGGGACCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS GCA 90 bp CCCAGGGGTCCCGGGAGTGAGCTTTCTTTTCTGGGTCTCAGGCTCTaGCTCACTCCTCTCTTCCCTCTGGGCCAGGTCCGCGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: PRGPGSELSFLGLRL*LTPLFPLGQVRVWA
Trigger: AGCCCACACGCGGACCTGGCCCAGAGGGAAGAGAGGAGTGAGGCAGAGCCTGAGACCCAGAAAAGAAAGCTCACTCCCGGGACCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 90 bp AGTCTGGGCACCTGGGGCAACACTGGCCTGGTCCACTCTGGGGCCTaGCACAGGTCGTGGGAGGGCAGTCAACCAAGGAGCATGTCACAG +
Preference number: 5 (lower is better)
Translates to: SLGTWGNTGLVHSGA*HRSWEGSQPRSMSQ
Trigger: CTGTGACATGCTCCTTGGTTGACTGCCCTCCCACGACCTGTGCCAGGCCCCAGAGTGGACCAGGCCAGTGTTGCCCCAGGTGCCCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 90 bp AGGATGCAGTCTGGGCACCTGGGGCAACACTGGCCTGGTCCACTCTaGGGCCTGGCACAGGTCGTGGGAGGGCAGTCAACCAAGGAGCAT +
Preference number: 5 (lower is better)
Translates to: RMQSGHLGQHWPGPL*GLAQVVGGQSTKEH
Trigger: ATGCTCCTTGGTTGACTGCCCTCCCACGACCTGTGCCAGGCCCCAGAGTGGACCAGGCCAGTGTTGCCCCAGGTGCCCAGACTGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 90 bp GCATGGCCTTCCTGGCATCGGCACTCCTGGCAGGGGTCTCGGGGGTaGGAGAAGCTCTCGCCGTCCACAAACACCTCTTCCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: AWPSWHRHSWQGSRG*EKLSPSTNTSSSRM
Trigger: CATCCTGGAGGAAGAGGTGTTTGTGGACGGCGAGAGCTTCTCCCACCCCCGAGACCCCTGCCAGGAGTGCCGATGCCAGGAAGGCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS-3UTR CAA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCCACTGCCCAGGGATCTaGCCTGGGTGTCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPHCPGI*PGCLQG
Trigger: GCCCTGCAGACACCCAGGCAAGATCCCTGGGCAGTG...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGGCAGGGGCACATGCCTaGGGCTCGCAGCTCACGCTG +
Preference number: 5 (lower is better)
Translates to: ARQGETPGLMNPYQALSWAGAHA*GSQLTL
Trigger: CAGCGTGAGCTGCGAGCCCAAGGCATGTGCCCCTGC...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGGCAGGGGCACATGCCTaGGGCTCGCAGCTCACGCTG +
Preference number: 5 (lower is better)
Translates to: QGILSIALTRVGTARQGEAGAHA*GSQLTL
Trigger: CAGCGTGAGCTGCGAGCCCAAGGCATGTGCCCCTGC...CTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCGCAGTCATGGGGCCCTaGGCGGGGCTGGGCGCAAGA +
Preference number: 5 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCAVMGP*AGLGAR
Trigger: TCTTGCGCCCAGCCCCGCCAAGGGCCCCATGACTGC...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CAA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGCAGTCATGGGGCCCTaGGCGGGGCTGGGCGCAAGA +
Preference number: 5 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSAVMGP*AGLGAR
Trigger: TCTTGCGCCCAGCCCCGCCAAGGGCCCCATGACTGC...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGCTCACAGTCAGAGCATaGAGGACAGCAGTCATGGGG +
Preference number: 5 (lower is better)
Translates to: QHPTPGIGLTPGTVTCCPLTVRA*RTAVMG
Trigger: CCCCATGACTGCTGTCCTCAATGCTCTGACTGTGAG...CGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CAA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCACCCCACACCGGGCATaGGCCTCACGCCTGGCACGG +
Preference number: 5 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCTPHRA*ASRLAR
Trigger: CCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGT...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CAA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTACCCCACACCGGGCATaGGCCTCACGCCTGGCACGG +
Preference number: 5 (lower is better)
Translates to: GILSIALTRVGTARQGETTPHRA*ASRLAR
Trigger: CCGTGCCAGGCGTGAGGCCAATGCCCGGTGTGGGGT...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS TCA 90 bp CGGCAGGGGTCCCCAGGTGTTGTCCACTCTTGGCCATGTTCCCAGTaGGAGCCACCTTCTGTGCAGCCTTGGCAGGTTGGGCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: RQGSPGVVHSWPCSQ*EPPSVQPWQVGQQC
Trigger: GCACTGCTGCCCAACCTGCCAAGGCTGCACAGAAGGTGGCTCTCACTGGGAACATGGCCAAGAGTGGACAACACCTGGGGACCCCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
CDS CCA 90 bp GCACTGCACGGCTCCTGTCAGACAGCGGCAGGTGGTGCAGGCATCTaGGGAGAAGGTCTCCCCGTTGCCGTAGGTCTGGCCATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: ALHGSCQTAAGGAGI*GEGLPVAVGLAILA
Trigger: AGCCAAAATGGCCAGACCTACGGCAACGGGGAGACCTTCTCCCCAGATGCCTGCACCACCTGCCGCTGTCTGACAGGAGCCGTGCAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS-3UTR CAA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCATGGGGCAGGTGTGCTaGGGGGCCACAGTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: TARQGETPGLMNPYQALSMGQVC*GATVSG
Trigger: GCCGCTCACTGTGGCCCCCAAGCACACCTGCCCCAT...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CACACCGGGCATTGGCCTCACGCCTGGCACGGTAACCTGCTGCCCGGCACGGATCCCATTGGCATACACTaGGCTGTGGTAGGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: HTGHWPHAWHGNLLPGTDPIGIH*AVVGAA
Trigger: AGCTGCACCTACCACAGCCAAGTGTATGCCAATGGG...ATCCGTGCCGGGCAGCAGGTTACCGTGCCAGGCGTGAGGCCAATGCCCGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CAA 90 bp CACGGGGTGAACCCGGCAGTGGCGGTTCCTGGCGATGTGGAGGCGTTCCAGGACCAGGCTTGTGAGATATaGCCTTCCCAAGACCGCAGC +
Preference number: 5 (lower is better)
Translates to: HGVNPAVAVPGDVEAFQDQACEI*PSQDRS
Trigger: GCTGCGGTCTTGGGAAGGCAATATCTCACAAGCCTG...GTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CAA 90 bp CCACAGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTCCTTCTCCGGAGGTTaGGGCTCTCCCTGCCCACAG +
Preference number: 5 (lower is better)
Translates to: PQALESVLSGTRRSPSDGSFSGG*GSPCPQ
Trigger: CTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGA...GCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CAA 90 bp GCTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGCACCAGGGGAACGCCGGTGCCGACCTTaGTGGCTCGCCTTTGATCAT +
Preference number: 5 (lower is better)
Translates to: AGKGEHYFAGTGSSAPGERRCRP*WLAFDH
Trigger: ATGATCAAAGGCGAGCCACAAAGGTCGGCACCGGCG...TTCCCCTGGTGCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS TCA 90 bp AGGGTCCTCCTCTCAGACTCAGGGGTGTCCATCCTTGGTGGTCTTTaGAGTTCTGCTCTCTCCTGGCCCAGGTGCGGGTCCGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RVLLSDSGVSILGGL*SSALSWPRCGSEPS
Trigger: GCTGGGCTCGGACCCGCACCTGGGCCAGGAGAGAGCAGAACTTCAAAGACCACCAAGGATGGACACCCCTGAGTCTGAGAGGAGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000678888.1
CDS GCA 90 bp ATCCCAATTTCCTGTGCTACCACCTGGCTGACAGCACTGGCTCCATaGTTGCTGGGCCTGGCCCCTCGGACCGAAAAACTGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: IPISCATTWLTALAP*LLGLAPRTEKLGLG
Trigger: CCCCAGGCCCAGTTTTTCGGTCCGAGGGGCCAGGCCCAGCAAGCATGGAGCCAGTGCTGTCAGCCAGGTGGTAGCACAGGAAATTGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678812.1
CDS GCA 90 bp TGTGCCGCATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTaGTTGATCCCCGAGACCTGGCCCTCTGACCGTGGGCCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: CAALSHSSARTGPSH*LIPETWPSDRGPGV
Trigger: CACACCTGGCCCACGGTCAGAGGGCCAGGTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCTTGCGGAAGAATGACTCAATGCGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 90 bp TGGGGCAACACTGGCCTGGTCCACTCTGGGGCCTGGCACAGGTCGTaGGAGGGCAGTCAACCAAGGAGCATGTCACAGTTCCATCCTGAC +
Preference number: 5 (lower is better)
Translates to: WGNTGLVHSGAWHRS*EGSQPRSMSQFHPD
Trigger: GTCAGGATGGAACTGTGACATGCTCCTTGGTTGACTGCCCTCCCACGACCTGTGCCAGGCCCCAGAGTGGACCAGGCCAGTGTTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS-3UTR CAA 90 bp CAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAGGACTGGGTGGGAGCTaGGCATCGCTCACAGCAGCT +
Preference number: 5 (lower is better)
Translates to: QAPVSRQGILSIALTRVGGLGGS*ASLTAA
Trigger: AGCTGCTGTGAGCGATGCCAAGCTCCCACCCAGTCC...TCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CAA 90 bp GGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCACTGCCCAGGGATCTaGCCTGGGTGTCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GILSIALTRVGTARQGETHCPGI*PGCLQG
Trigger: GCCCTGCAGACACCCAGGCAAGATCCCTGGGCAGTG...AGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp ACTGAATGGGGAGGACTTCAGCACCCCACACCGGGCATTGGCCTCACGCCTGGCCAGCTCTCCAAGCAGTaGAGCTCTGAACACGAGGGC +
Preference number: 5 (lower is better)
Translates to: TEWGGLQHPTPGIGLTPGQLSKQ*SSEHEG
Trigger: GCCCTCGTGTTCAGAGCTCAACTGCTTGGAGAGCTG...GCCAGGCGTGAGGCCAATGCCCGGTGTGGGGTGCTGAAGTCCTCCCCATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS TCA 90 bp CGGACACAGAGGCCCCGCTCTTGGAGTCTGAAGGTCTCCTGGCTCTaGTACTGGTGTCCCTGGTACTCACAGCCATCGCAGACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RTQRPRSWSLKVSWL*YWCPWYSQPSQTGQ
Trigger: CTGCCCTGTCTGCGATGGCTGTGAGTACCAGGGACACCAGTATCAGAGCCAGGAGACCTTCAGACTCCAAGAGCGGGGCCTCTGTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS GCA 90 bp CTTAAGAAGCCCAGGGTCCATCATGGCCCCAGGCACTGTGTTCAGTaGGGCCAGTGCTGTAGGGGAGGAGAATGGACAGGTGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LKKPRVHHGPRHCVQ*GQCCRGGEWTGGGS
Trigger: GGAGCCTCCACCTGTCCATTCTCCTCCCCTACAGCACTGGCCGCACTGAACACAGTGCCTGGGGCCATGATGGACCCTGGGCTTCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS GCA 90 bp GGTGGTCAGTGTGGAGATTCAAACCCAGCCCTGTCTCTAAAACCCTaGCCCTTCCGCTTGCCCTCACCACAGCAGGGCCCCAGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: GGQCGDSNPALSLKP*PFRLPSPQQGPSVP
Trigger: GGGAACACTGGGGCCCTGCTGTGGTGAGGGCAAGCGGAAGGGGCAGGGTTTTAGAGACAGGGCTGGGTTTGAATCTCCACACTGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS GCA 90 bp CCTCTCAGACTCAGGGGTGTCCATCCTTGGTGGTCTTTGAAGTTCTaGTCTCTCCTGGCCCAGGTGCGGGTCCGAGCCCAGCCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: PLRLRGVHPWWSLKF*SLLAQVRVRAQPFK
Trigger: CTTGAAGGGCTGGGCTCGGACCCGCACCTGGGCCAGGAGAGAGCAGAACTTCAAAGACCACCAAGGATGGACACCCCTGAGTCTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000678888.1
CDS GCA 90 bp TCCACTGACGGATTCCTAGGGCTGTGCAGACAGACAGGGCTCCCATaGTCTGCGTGTCCCTCCCTCAGGAACCCATGCTTGGCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: STDGFLGLCRQTGLP*SACPSLRNPCLASD
Trigger: GTCAGAGGCCAAGCATGGGTTCCTGAGGGAGGGACACGCAGAGCATGGGAGCCCTGTCTGTCTGCACAGCCCTAGGAATCCGTCAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 90 bp CCCAGGCACTGTGTTCAGTGCGGCCAGTGCTGTAGGGGAGGAGAATaGACAGGTGGAGGCTCCCCTTGGAAGAAACACCACCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: PRHCVQCGQCCRGGE*TGGGSPWKKHHPGQ
Trigger: TTGGCCAGGGTGGTGTTTCTTCCAAGGGGAGCCTCCACCTGTCCATTCTCCTCCCCTACAGCACTGGCCGCACTGAACACAGTGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS-3UTR CAA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACCGGCCCCGGTCATCATaGGTCACGTGCACACTGAAG +
Preference number: 5 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDRPRSS*VTCTLK
Trigger: CTTCAGTGTGCACGTGACCAATGATGACCGGGGCCG...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCAGGGGTCCCCAGGTGTaGTCCACTCTTGGCCATGTT +
Preference number: 5 (lower is better)
Translates to: PNQGGNCSPRGDSWPDEPRGPQV*STLGHV
Trigger: AACATGGCCAAGAGTGGACAACACCTGGGGACCCCT...GGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCACTGCCCAGGGATCTaGCCTGGGTGTCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVHCPGI*PGCLQG
Trigger: GCCCTGCAGACACCCAGGCAAGATCCCTGGGCAGTG...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACACAGAGGCCCCGCTCTaGGAGTCTGAAGGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDTEAPL*ESEGLL
Trigger: CAGGAGACCTTCAGACTCCAAGAGCGGGGCCTCTGT...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp AGGTGCGGGGACAGGGTGGGCCGCACTCATCAAACACGAAGCCACGCTCCAGGGGTGAAGTTCTGCCCATaGGCATACACTTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RCGDRVGRTHQTRSHAPGVKFCP*AYTWLW
Trigger: CCACAGCCAAGTGTATGCCAATGGGCAGAACTTCAC...CCCTGGAGCGTGGCTTCGTGTTTGATGAGTGCGGCCCACCCTGTCCCCGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CAA 90 bp CTGCGTCAGCGTGGTAGTCCTTCTCCGGAGGTTTGGGCTCTCCCTGCCCACAGGCCCTTCAAGGGCATCTaGGGAAGGCAGGTTTTGGGA +
Preference number: 5 (lower is better)
Translates to: LRQRGSPSPEVWALPAHRPFKGI*GRQVLG
Trigger: TCCCAAAACCTGCCTTCCCAAGATGCCCTTGAAGGG...CCTGTGGGCAGGGAGAGCCCAAACCTCCGGAGAAGGACTACCACGCTGACGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS CCA 90 bp GATCCTGAGGGTCCTCCTCTCAGACTCAGGGGTGTCCATCCTTGGTaGTCTTTGAAGTTCTGCTCTCTCCTGGCCCAGGTGCGGGTCCGA +
Preference number: 5 (lower is better)
Translates to: DPEGPPLRLRGVHPW*SLKFCSLLAQVRVR
Trigger: TCGGACCCGCACCTGGGCCAGGAGAGAGCAGAACTTCAAAGACCACCAAGGATGGACACCCCTGAGTCTGAGAGGAGGACCCTCAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000678888.1
CDS-3UTR CAA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGCGGCCCCGGTCATCATaGGTCACGTGCACACTGAAG +
Preference number: 5 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLRPRSS*VTCTLK
Trigger: CTTCAGTGTGCACGTGACCAATGATGACCGGGGCCG...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610776.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CACTCCTGCCTGGCGACAGTGACTGGCGTAGGCTTCCAGGGCATCACAGAGGCACACTGTAGACAAGGGTaGGAGCTGGACAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: HSCLATVTGVGFQGITEAHCRQG*ELDRKV
Trigger: CACCTTCCTGTCCAGCTCCAACCCTTGTCTACAGTG...TGCCTCTGTGATGCCCTGGAAGCCTACGCCAGTCACTGTCGCCAGGCAGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611280.4
CDS-3UTR CAA 90 bp AACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTAACCTTCTGTGCAGCCTaGGCAGGTTGGGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: NQGGNCSPRGDSWPDEPLTFCAA*AGWAAV
Trigger: CACTGCTGCCCAACCTGCCAAGGCTGCACAGAAGGT...TAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGAGGGGTCCCCAGGTGTaGTCCACTCTTGGCCATGTT +
Preference number: 5 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRRGPQV*STLGHV
Trigger: AACATGGCCAAGAGTGGACAACACCTGGGGACCCCT...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp TCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAACAGAGGCCCCGCTCTaGGAGTCTGAAGGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: SRQGILSIALTRVGTARQTEAPL*ESEGLL
Trigger: CAGGAGACCTTCAGACTCCAAGAGCGGGGCCTCTGT...TTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGACAGCTCTCCAAGCAGTaGAGCTCTGAACACGAGGGC +
Preference number: 5 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGQLSKQ*SSEHEG
Trigger: GCCCTCGTGTTCAGAGCTCAACTGCTTGGAGAGCTG...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611280.4
ENST00000613019.4
CDS CCA 90 bp TCTGATCCTGAGGGTCCTCCTCTCAGACTCAGGGGTGTCCATCCTTaGTGGTCTTTGAAGTTCTGCTCTCTCCTGGCCCAGGTGCGGGTC +
Preference number: 5 (lower is better)
Translates to: SDPEGPPLRLRGVHP*WSLKFCSLLAQVRV
Trigger: GACCCGCACCTGGGCCAGGAGAGAGCAGAACTTCAAAGACCACCAAGGATGGACACCCCTGAGTCTGAGAGGAGGACCCTCAGGATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000678888.1
CDS-3UTR CAA 90 bp GTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCATCCTGGGCAAAGCCATaGAAGTTCCCACAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: VQAGHSLHSPNQGGNCSPSWAKP*KFPQSP
Trigger: TGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGGA...TGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCGTAGGTCTGGCCATTTaGGCTGCAGCCCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCVGLAI*AAAPAM
Trigger: CATTGCAGGGGCTGCAGCCAAAATGGCCAGACCTAC...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CAA 90 bp AGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGTAGGTCTGGCCATTTaGGCTGCAGCCCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: RVGTARQGETPGLMNPYQVGLAI*AAAPAM
Trigger: CATTGCAGGGGCTGCAGCCAAAATGGCCAGACCTAC...CTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp TGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGTAGGTCTGGCCATTTaGGCTGCAGCCCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: CSPRGDSWPDEPLSGTVLVGLAI*AAAPAM
Trigger: CATTGCAGGGGCTGCAGCCAAAATGGCCAGACCTAC...CAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CAGGCTCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGACACTGTAGACAAGGGTaGGAGCTGGACAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QAPVSRQGILSIALTRVGHCRQG*ELDRKV
Trigger: CACCTTCCTGTCCAGCTCCAACCCTTGTCTACAGTG...TCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CAA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCACCTTCTGTGCAGCCTaGGCAGGTTGGGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVTFCAA*AGWAAV
Trigger: CACTGCTGCCCAACCTGCCAAGGCTGCACAGAAGGT...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACCCCATTGGCATACACTaGGCTGTGGTAGGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDPIGIH*AVVGAA
Trigger: AGCTGCACCTACCACAGCCAAGTGTATGCCAATGGG...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp GCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTGGCCCATTGGCATACACTaGGCTGTGGTAGGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: ARQGETPGLMNPYQALSWPIGIH*AVVGAA
Trigger: AGCTGCACCTACCACAGCCAAGTGTATGCCAATGGG...CCAGGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp CAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGCTCACAGTCAGAGCATaGAGGACAGCAGTCATGGGG +
Preference number: 5 (lower is better)
Translates to: QAGHSLHSPNQGGNCSPRLTVRA*RTAVMG
Trigger: CCCCATGACTGCTGTCCTCAATGCTCTGACTGTGAG...CCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS GCA 90 bp GAGCCGAGATTAGAAATCGGGCTCAGAACTCAGAACTCCTCTGACTaGCTGGGGAGATCTCTGACCCTGATCCACCTCCCCTCACACCCC +
Preference number: 5 (lower is better)
Translates to: EPRLEIGLRTQNSSD*LGRSLTLIHLPSHP
Trigger: GGGGTGTGAGGGGAGGTGGATCAGGGTCAGAGATCTCCCCAGGCAGTCAGAGGAGTTCTGAGTTCTGAGCCCGATTTCTAATCTCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS CCA 90 bp AGGAGAATGGACAGGTGGAGGCTCCCCTTGGAAGAAACACCACCCTaGCCAAGGCCAAGTGGATACATTCTGTGCCAGCCCTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: RRMDRWRLPLEETPP*PRPSGYILCQPWAK
Trigger: CTTTGCCCAGGGCTGGCACAGAATGTATCCACTTGGCCTTGGCCAGGGTGGTGTTTCTTCCAAGGGGAGCCTCCACCTGTCCATTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS CCA 90 bp GGCCAGTGCTGTAGGGGAGGAGAATGGACAGGTGGAGGCTCCCCTTaGAAGAAACACCACCCTGGCCAAGGCCAAGTGGATACATTCTGT +
Preference number: 5 (lower is better)
Translates to: GQCCRGGEWTGGGSP*KKHHPGQGQVDTFC
Trigger: ACAGAATGTATCCACTTGGCCTTGGCCAGGGTGGTGTTTCTTCCAAGGGGAGCCTCCACCTGTCCATTCTCCTCCCCTACAGCACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS-3UTR CAA 90 bp ACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCCTCCTGGGCAAAGCCATaGAAGTTCCCACAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: TARQGETPGLMNPYQALSSWAKP*KFPQSP
Trigger: TGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGGA...GGACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp GGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTTCCTGGGCAAAGCCATaGAAGTTCCCACAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: GNCSPRGDSWPDEPLSGTSWAKP*KFPQSP
Trigger: TGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGGA...AGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp AGGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGTCCTGGGCAAAGCCATaGAAGTTCCCACAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: RLWSLCFQGPAGVPRMAMSWAKP*KFPQSP
Trigger: TGGGCTCTGTGGGAACTTCAATGGCTTTGCCCAGGA...CATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CAA 90 bp CTTGTGAGATATTGCCTTCCCAAGACCGCAGCATCTTCTTCCCTGGACTCTGGGATACCCGCGGCCCTCTaGCACCTGCCAGCTATTCCC +
Preference number: 5 (lower is better)
Translates to: LVRYCLPKTAASSSLDSGIPAAL*HLPAIP
Trigger: GGGAATAGCTGGCAGGTGCAAGAGGGCCGCGGGTAT...CCCAGAGTCCAGGGAAGAAGATGCTGCGGTCTTGGGAAGGCAATATCTCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS-3UTR CAA 90 bp CAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCACACTGTAGACAAGGGTaGGAGCTGGACAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QGGNCSPRGDSWPDEPLSHCRQG*ELDRKV
Trigger: CACCTTCCTGTCCAGCTCCAACCCTTGTCTACAGTG...TGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp GCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAAGGTGTTGTCCACTCTaGGCCATGTTCCCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: AGHSLHSPNQGGNCSPRGRCCPL*AMFPVR
Trigger: TCTCACTGGGAACATGGCCAAGAGTGGACAACACCT...TCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp GGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACAGGTGTTGTCCACTCTaGGCCATGTTCCCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: GHSLHSPNQGGNCSPRGDRCCPL*AMFPVR
Trigger: TCTCACTGGGAACATGGCCAAGAGTGGACAACACCT...GTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp AGCCCTAACCAGGGTGGGAACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAAGTGAAGTTCTGCCCATaGGCATACACTTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SPNQGGNCSPRGDSWPDEVKFCP*AYTWLW
Trigger: CCACAGCCAAGTGTATGCCAATGGGCAGAACTTCAC...TTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTTCCCACCCTGGTTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS-3UTR CAA 90 bp TCCAGTGTCCAGGCAGGGCATTCTCTCCATAGCCCTAACCAGGGTGGGAACTGCCTCACAGTCAGAGCATaGAGGACAGCAGTCATGGGG +
Preference number: 5 (lower is better)
Translates to: SSVQAGHSLHSPNQGGNCLTVRA*RTAVMG
Trigger: CCCCATGACTGCTGTCCTCAATGCTCTGACTGTGAG...GCAGTTCCCACCCTGGTTAGGGCTATGGAGAGAATGCCCTGCCTGGACACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS-3UTR CAA 90 bp GGCTTTGGAGTCTGTGCTTTCAGGGACCCGCAGGAGTCCCTCGGATGGCTATGGCAGGGGTGTCCATCCTaGGTGGTCTTTGAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: GFGVCAFRDPQESLGWLWQGCPS*VVFEVL
Trigger: CAGAACTTCAAAGACCACCAAGGATGGACACCCCTG...CCATAGCCATCCGAGGGACTCCTGCGGGTCCCTGAAAGCACAGACTCCAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678888.1
CDS TCA 90 bp TTCCATCCTGACAGTGGCAGGCATGGCAAGGGCTGTCTGCATCCGTaGAGTTCTGCCCATTGGCATACACTTGGCTGTGGTAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: FHPDSGRHGKGCLHP*SSAHWHTLGCGRCS
Trigger: GCTGCACCTACCACAGCCAAGTGTATGCCAATGGGCAGAACTTCACGGATGCAGACAGCCCTTGCCATGCCTGCCACTGTCAGGATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS TCA 90 bp GCTGCTGGGCGATGTTGCTGCACGTCCCATTGCTGTCTGTGCTCATaGATGTCAAGTGAGACTCCTCAGCCCTGTACCCTTCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: AAGRCCCTSHCCLCS*MSSETPQPCTLLQL
Trigger: CAGCTGGAGAAGGGTACAGGGCTGAGGAGTCTCACTTGACATTCATGAGCACAGACAGCAATGGGACGTGCAGCAACATCGCCCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 90 bp TTGGAAGAAACACCACCCTGGCCAAGGCCAAGTGGATACATTCTGTaGCAGCCCTGGGCAAAGACAGATGACAGGAGGAGCTGCCCACAG +
Preference number: 5 (lower is better)
Translates to: LEETPPWPRPSGYIL*QPWAKTDDRRSCPQ
Trigger: CTGTGGGCAGCTCCTCCTGTCATCTGTCTTTGCCCAGGGCTGGCACAGAATGTATCCACTTGGCCTTGGCCAGGGTGGTGTTTCTTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS GCA 90 bp CATCACTTTAATCATCCCTTTGAGGACTCAGCAATGACCAGAGGGTaGTGGGAAGGGCGAGCACTACTTCGCAGGCACGGGATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: HHFNHPFEDSAMTRG*WEGRALLRRHGILS
Trigger: GCTGAGGATCCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCACCCTCTGGTCATTGCTGAGTCCTCAAAGGGATGATTAAAGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 90 bp AGTGGAGTAACTAGAGATGAAGAGGAAAGGTGTGGAACAGGCATGTaGCAGGCAGGGCTGCTGGGCGATGTTGCTGCACGTCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: SGVTRDEEERCGTGM*QAGLLGDVAARPIA
Trigger: AGCAATGGGACGTGCAGCAACATCGCCCAGCAGCCCTGCCTGGCACATGCCTGTTCCACACCTTTCCTCTTCATCTCTAGTTACTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS-3UTR CAA 90 bp AACTGCTCGCCAAGGGGAGACTCCTGGCCTGATGAACCCTTATCAGGCACTGTCGTGAAGTTCTGCCCATaGGCATACACTTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: NCSPRGDSWPDEPLSGTVVKFCP*AYTWLW
Trigger: CCACAGCCAAGTGTATGCCAATGGGCAGAACTTCAC...GACAGTGCCTGATAAGGGTTCATCAGGCCAGGAGTCTCCCCTTGGCGAGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
CDS TCA 90 bp AGGTCCAAAGCGCTTGTTGAACGAATGAACCAAGGAACGAGTGAATaGACGAATGAATGCCCGCGAAGGACGTGGTGCCGCGCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RSKALVERMNQGTSE*TNECPRRTWCRAVF
Trigger: GAAGACCGCGCGGCACCACGTCCTTCGCGGGCATTCATTCGTTCATTCACTCGTTCCTTGGTTCATTCGTTCAACAAGCGCTTTGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS GCA 90 bp TGTCACAGTTCCATCCTGACAGTGGCAGGCATGGCAAGGGCTGTCTaGATCCGTGAAGTTCTGCCCATTGGCATACACTTGGCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: CHSSILTVAGMARAV*IREVLPIGIHLAVV
Trigger: TACCACAGCCAAGTGTATGCCAATGGGCAGAACTTCACGGATGCAGACAGCCCTTGCCATGCCTGCCACTGTCAGGATGGAACTGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS GCA 90 bp GCAACCCCCTTCCGGGGATTCACTTTCTCATGGGCATTCGGGCCTTaGAGAGGACAAAGCACAATTAGGGTCCGGATTAGAAGTGTACAC +
Preference number: 5 (lower is better)
Translates to: ATPFRGFTFSWAFGP*RGQSTIRVRIRSVH
Trigger: GTGTACACTTCTAATCCGGACCCTAATTGTGCTTTGTCCTCTGCAAGGCCCGAATGCCCATGAGAAAGTGAATCCCCGGAAGGGGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS GCA 90 bp TACATACACGATAAAGACCCAGACCCTGCCCTTGAGATGAGTAACTaGGTCTCTTCTCTGGGGTCTCGGCGTCTAACAGCGTCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: YIHDKDPDPALEMSN*VSSLGSRRLTASGP
Trigger: TGGACCTGACGCTGTTAGACGCCGAGACCCCAGAGAAGAGACGCAGTTACTCATCTCAAGGGCAGGGTCTGGGTCTTTATCGTGTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS TCA 90 bp TGCCCCTCTGCTCTCCCTGTCCCTGAGGTTGCATTCAGGCCTTTCTaGAACTATCAGACCTGCAAGTTGCCCTCTTGCTTTTTCCGTAAC +
Preference number: 5 (lower is better)
Translates to: CPSALPVPEVAFRPF*NYQTCKLPSCFFRN
Trigger: GTTACGGAAAAAGCAAGAGGGCAACTTGCAGGTCTGATAGTTTCAGAAAGGCCTGAATGCAACCTCAGGGACAGGGAGAGCAGAGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 90 bp TTAGCTAAAGCTGCAGTGACAGGGAAGACTGGGAGAGGTCAGGGCTaGAGCGTGCATGAACAGGTCCTATTTAGCCATGTGTGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LAKAAVTGKTGRGQG*SVHEQVLFSHVCLA
Trigger: AGCCAAACACACATGGCTAAATAGGACCTGTTCATGCACGCTCCAGCCCTGACCTCTCCCAGTCTTCCCTGTCACTGCAGCTTTAGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS TCA 90 bp TCTCGGCGTCTAACAGCGTCAGGTCCAAAGCGCTTGTTGAACGAATaGACCAAGGAACGAGTGAATGAACGAATGAATGCCCGCGAAGGA +
Preference number: 5 (lower is better)
Translates to: SRRLTASGPKRLLNE*TKERVNERMNAREG
Trigger: TCCTTCGCGGGCATTCATTCGTTCATTCACTCGTTCCTTGGTTCATTCGTTCAACAAGCGCTTTGGACCTGACGCTGTTAGACGCCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS TCA 90 bp ACAGGCATGAGCCACCGGCTGGCCTATAGGTGCTATTTAAATCCATaGGATCTCCTAGGGAGCTCAAGTTGCTGGAATCTGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: TGMSHRLAYRCYLNP*DLLGSSSCWNLMGV
Trigger: CACTCCCATCAGATTCCAGCAACTTGAGCTCCCTAGGAGATCTCATGGATTTAAATAGCACCTATAGGCCAGCCGGTGGCTCATGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 90 bp GACCTGTATGTAGGCAGTGGCTTTTTCAGGGGAAATGGTAGAATCTaGCACATGAGTTGGGCATCTGTTTGGTTATCCTGTGGTAGTGGC +
Preference number: 5 (lower is better)
Translates to: DLYVGSGFFRGNGRI*HMSWASVWLSCGSG
Trigger: GCCACTACCACAGGATAACCAAACAGATGCCCAACTCATGTGCCAGATTCTACCATTTCCCCTGAAAAAGCCACTGCCTACATACAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 90 bp CTGAGGTTGCATTCAGGCCTTTCTGAAACTATCAGACCTGCAAGTTaGCCTCTTGCTTTTTCCGTAACCCTCATCACTTTAATCATCCCT +
Preference number: 5 (lower is better)
Translates to: LRLHSGLSETIRPAS*PLAFSVTLITLIIP
Trigger: AGGGATGATTAAAGTGATGAGGGTTACGGAAAAAGCAAGAGGGCAACTTGCAGGTCTGATAGTTTCAGAAAGGCCTGAATGCAACCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS TCA 90 bp CACATTCTAACCATTAACACACAGCTTTGTAGTCGCCTGTTCCCTTaGCTTTCCACCTCACTAGGCAGTATCATCATTAACTTTTGCATT +
Preference number: 5 (lower is better)
Translates to: HILTINTQLCSRLFP*LSTSLGSIIINFCI
Trigger: AATGCAAAAGTTAATGATGATACTGCCTAGTGAGGTGGAAAGTCAAGGGAACAGGCGACTACAAAGCTGTGTGTTAATGGTTAGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678812.1
ENST00000679229.1
CDS CAA 72 bp CGGCTGGGAGGACTGCGCATGCTCGAAGGGTGGGGGTaGAGGCCGACGGGGCGCCGTACGGCGGAGGCGGGG +
Preference number: 6 (lower is better)
Translates to: RLGGLRMLEGWG*RPTGRRTAEAG
Trigger: CCCCGCCTCCGCCGTACGGCGCCCCGTCGGCCTCAACCCCCACCCTTCGAGCATGCGCAGTCCTCCCAGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS CCA 72 bp CTGCGGGCAGCACTCTCCCGGCAGCAGGACAGGCTCTaGACAGGGCAGCGGCACGCAGCGGCGGGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: LRAALSRQQDRL*TGQRHAAAGQA
Trigger: TGCCTGGCCCGCCGCTGCGTGCCGCTGCCCTGTCCAGAGCCTGTCCTGCTGCCGGGAGAGTGCTGCCCGCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp GTGGAGGCGTTCCAGGACCTCGGCGCGCAGGGTCGCTaGCATCTCGGCTCCGGCTCCGCGACCTGGGAGCCG +
Preference number: 6 (lower is better)
Translates to: VEAFQDLGAQGR*HLGSGSATWEP
Trigger: CGGCTCCCAGGTCGCGGAGCCGGAGCCGAGATGCCAGCGACCCTGCGCGCCGAGGTCCTGGAACGCCTCCAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS TCA 72 bp CAGGGCAGGGGCCTTGTCGGGGCCACACGAGAGCGGTaGGCAGCGCTGGCTCTGGCAACGCACGGTGCCCGC +
Preference number: 6 (lower is better)
Translates to: QGRGLVGATRER*AALALATHGAR
Trigger: GCGGGCACCGTGCGTTGCCAGAGCCAGCGCTGCTCACCGCTCTCGTGTGGCCCCGACAAGGCCCCTGCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS GCA 72 bp CACAGTGAGCGGCCCCATCCTGGCAGACGCAGGCTGTaGAGGCGTCAGGCTCCCAGCGTGCCCCCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: HSERPHPGRRRL*RRQAPSVPPRA
Trigger: GGCCCGAGGGGGCACGCTGGGAGCCTGACGCCTGCACAGCCTGCGTCTGCCAGGATGGGGCCGCTCACTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000620378.1
CDS GCA 72 bp GCCACCGGGTGCCCATCCACCGTGACTGCCCCGTCCTaGAGCAGCCGCACGGCCATGTCTCCCAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: ATGCPSTVTAPS*SSRTAMSPSST
Trigger: GGTGCTGCTGGGAGACATGGCCGTGCGGCTGCTGCAGGACGGGGCAGTCACGGTGGATGGGCACCCGGTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460528.1
ENST00000492679.5
ENST00000610776.4
ENST00000613019.4
ENST00000620378.1
ENST00000676619.1
ENST00000678888.1
ENST00000679229.1
CDS GCA 72 bp GCAGCGGCACGCAGCGGCGGGCCAGGCACTGCACGTTaGCGCTCAGACAGCGACACAGACGGCAGGGGTCAG +
Preference number: 6 (lower is better)
Translates to: AAARSGGPGTAR*RSDSDTDGRGQ
Trigger: CTGACCCCTGCCGTCTGTGTCGCTGTCTGAGCGGCAACGTGCAGTGCCTGGCCCGCCGCTGCGTGCCGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS GCA 72 bp GGACAGGGCAGCGGCACGCAGCGGCGGGCCAGGCACTaGACGTTGCCGCTCAGACAGCGACACAGACGGCAG +
Preference number: 6 (lower is better)
Translates to: GQGSGTQRRARH*TLPLRQRHRRQ
Trigger: CTGCCGTCTGTGTCGCTGTCTGAGCGGCAACGTGCAGTGCCTGGCCCGCCGCTGCGTGCCGCTGCCCTGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS GCA 72 bp ACTTCAAAGGGACCCGGGCGCGCTAAGCTCGGCCCCTaGCCCGCGCAGGCTCCTTGTGGCCCCACCGCCTTC +
Preference number: 6 (lower is better)
Translates to: TSKGPGRAKLGP*PAQAPCGPTAF
Trigger: GAAGGCGGTGGGGCCACAAGGAGCCTGCGCGGGGCAGGGGCCGAGCTTAGCGCGCCCGGGTCCCTTTGAAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 72 bp CTGCAGCGAGGGCAGCAGCTCCCCCGCTCGGTGACCTaGAGCTTGCAGGGAAGGGGTGGGCACTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: LQRGQQLPRSVT*SLQGRGGHCSR
Trigger: GCGGCTGCAGTGCCCACCCCTTCCCTGCAAGCTCCAGGTCACCGAGCGGGGGAGCTGCTGCCCTCGCTGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 72 bp GGAGCCCCACGGGGTGAACCCGGCAGTGGCGGTTCCTaGCGATGTGGAGGCGTTCCAGGACCTCGGCGCGCA +
Preference number: 6 (lower is better)
Translates to: GAPRGEPGSGGS*RCGGVPGPRRA
Trigger: TGCGCGCCGAGGTCCTGGAACGCCTCCACATCGCCAGGAACCGCCACTGCCGGGTTCACCCCGTGGGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CAA 72 bp GGCAGCGGCACGCAGCGGCGGGCCAGGCACTGCACGTaGCCGCTCAGACAGCGACACAGACGGCAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: GSGTQRRARHCT*PLRQRHRRQGS
Trigger: TGACCCCTGCCGTCTGTGTCGCTGTCTGAGCGGCAACGTGCAGTGCCTGGCCCGCCGCTGCGTGCCGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CAA 90 bp TCTGGACAGGGCAGCGGCACGCAGCGGCGGGCCAGGCACTGCACGTaGCCGCTCAGACAGCGACACAGACGGCAGGGGTCAGAGGGGTGG +
Preference number: 6 (lower is better)
Translates to: SGQGSGTQRRARHCT*PLRQRHRRQGSEGW
Trigger: CCACCCCTCTGACCCCTGCCGTCTGTGTCGCTGTCTGAGCGGCAACGTGCAGTGCCTGGCCCGCCGCTGCGTGCCGCTGCCCTGTCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp TCGGGGCCACACGAGAGCGGTGAGCAGCGCTGGCTCTaGCAACGCACGGTGCCCGCCATGCAGGAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: SGPHESGEQRWL*QRTVPAMQEQL
Trigger: CAGCTGCTCCTGCATGGCGGGCACCGTGCGTTGCCAGAGCCAGCGCTGCTCACCGCTCTCGTGTGGCCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 72 bp GCCTTGTCGGGGCCACACGAGAGCGGTGAGCAGCGCTaGCTCTGGCAACGCACGGTGCCCGCCATGCAGGAG +
Preference number: 6 (lower is better)
Translates to: ALSGPHESGEQR*LWQRTVPAMQE
Trigger: CTCCTGCATGGCGGGCACCGTGCGTTGCCAGAGCCAGCGCTGCTCACCGCTCTCGTGTGGCCCCGACAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 72 bp CCCCCGCTCGGTGACCTGGAGCTTGCAGGGAAGGGGTaGGCACTGCAGCCGCACACAGCTGACCTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PPLGDLELAGKG*ALQPHTADLAS
Trigger: GCTGGCCAGGTCAGCTGTGTGCGGCTGCAGTGCCCACCCCTTCCCTGCAAGCTCCAGGTCACCGAGCGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS GCA 72 bp CCTGGCACACCTGCCCCTCGCGCCCCGCCGAGTCACTaGCAGAGTGCAGTGCGCTCACTTCAAAGGGACCCG +
Preference number: 6 (lower is better)
Translates to: PGTPAPRAPPSH*QSAVRSLQRDP
Trigger: CGGGTCCCTTTGAAGTGAGCGCACTGCACTCTGGCAGTGACTCGGCGGGGCGCGAGGGGCAGGTGTGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 72 bp TGGCAGTGGGCATGGCCTTCCTGGCATCGGCACTCCTaGCAGGGGTCTCGGGGGTGGGAGAAGCTCTCGCCG +
Preference number: 6 (lower is better)
Translates to: WQWAWPSWHRHS*QGSRGWEKLSP
Trigger: CGGCGAGAGCTTCTCCCACCCCCGAGACCCCTGCCAGGAGTGCCGATGCCAGGAAGGCCATGCCCACTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp GGCAGGCAGCAGTGGGCGATGGGAAGCGCTCCCCGCTaGCAAACTCCTTCCCCTGGTACAGGCAGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: GRQQWAMGSAPR*QTPSPGTGSRR
Trigger: GCGACGGCTGCCTGTACCAGGGGAAGGAGTTTGCCAGCGGGGAGCGCTTCCCATCGCCCACTGCTGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp ACAGTCCAGCGCTCTCCAGAGGCCACCTCACGGCCCTaGTGCACGCAGGACTGGGTGGGAGCCCGGCATACG +
Preference number: 6 (lower is better)
Translates to: TVQRSPEATSRP*CTQDWVGARHT
Trigger: CGTATGCCGGGCTCCCACCCAGTCCTGCGTGCACCAGGGCCGTGAGGTGGCCTCTGGAGAGCGCTGGACTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CAA 72 bp CAGCCATCGCAGACAGGGCAGCACTGCCCAGGGATCTaGCCTGGGTGTCTGCAGGGCACTGGCGGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: QPSQTGQHCPGI*PGCLQGTGGQG
Trigger: GCCCTGCCCGCCAGTGCCCTGCAGACACCCAGGCAAGATCCCTGGGCAGTGCTGCCCTGTCTGCGATGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CAA 72 bp GCAGGCTCCTTGTGGCCCCACCGCCTTCTAGGGGTCTaGCCTGTGGCGGGAGTTGAGCCGGACTGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: AGSLWPHRLLGV*PVAGVEPDWAG
Trigger: TCCCGCCCAGTCCGGCTCAACTCCCGCCACAGGCAAGACCCCTAGAAGGCGGTGGGGCCACAAGGAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 72 bp GGCAACGCACGGTGCCCGCCATGCAGGAGCAGCTGGTaGAGGTGTCCACAGTCCAGCGCTCTCCAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: GNARCPPCRSSW*RCPQSSALQRP
Trigger: TGGCCTCTGGAGAGCGCTGGACTGTGGACACCTGCACCAGCTGCTCCTGCATGGCGGGCACCGTGCGTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS GCA 72 bp GCAGCCTCCAGTCGCCCCAGCCACTCTCGCAGGGGGTaGCACTGCTCCTGGGAGTTCCCAGCAAGGACTGAG +
Preference number: 6 (lower is better)
Translates to: AASSRPSHSRRG*HCSWEFPARTE
Trigger: CTCAGTCCTTGCTGGGAACTCCCAGGAGCAGTGGCACCCCCTGCGAGAGTGGCTGGGGCGACTGGAGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000620378.1
CDS GCA 72 bp AGCCATCGCAGACAGGGCAGCACTGCCCAGGGATCTTaGCTGGGTGTCTGCAGGGCACTGGCGGGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: SHRRQGSTAQGS*LGVCRALAGRA
Trigger: TGCCCTGCCCGCCAGTGCCCTGCAGACACCCAGGCAAGATCCCTGGGCAGTGCTGCCCTGTCTGCGATGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp ACAGTCCAGCGCTCTCCAGAGGCCACCTCACGGCCCTaGTGCACGCAGGACTGGGTGGGAGCTTGGCATCGC +
Preference number: 6 (lower is better)
Translates to: TVQRSPEATSRP*CTQDWVGAWHR
Trigger: GCGATGCCAAGCTCCCACCCAGTCCTGCGTGCACCAGGGCCGTGAGGTGGCCTCTGGAGAGCGCTGGACTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492679.5
ENST00000610776.4
CDS CCA 72 bp TGGCAGGGAAGGGGCACAGTGCAGGGGCACATGCCTTaGGCTCGCAGCTCACGCTGCCCTCCCAGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: WQGRGTVQGHMP*ARSSRCPPSKG
Trigger: GCCTTTGCTGGGAGGGCAGCGTGAGCTGCGAGCCCAAGGCATGTGCCCCTGCACTGTGCCCCTTCCCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp GGCCCCGATGGCAGGTGCAGGCGATGCACGCATTGCTaGGGTCCCGCCAGCTCTCTCCATCTGCCACTCTCC +
Preference number: 6 (lower is better)
Translates to: GPDGRCRRCTHC*GPASSLHLPLS
Trigger: GGAGAGTGGCAGATGGAGAGAGCTGGCGGGACCCCAGCAATGCGTGCATCGCCTGCACCTGCCATCGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS CCA 72 bp GCTCACACTGGACACTCCCATTCTGCCAACAGGGCCTaGTCAGCACGCCAGAGGCAGGCCCCGGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: AHTGHSHSANRA*SARQRQAPEPG
Trigger: GCCTGGCTCCGGGGCCTGCCTCTGGCGTGCTGACCAGGCCCTGTTGGCAGAATGGGAGTGTCCAGTGTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616669.4
CDS TCA 72 bp GTCTCCCGCATCCCACCCCGGCAGCTCCCTATCCCATaGCCCTCACCATCACAGTCAGGGCAGCAGTCGCCC +
Preference number: 6 (lower is better)
Translates to: VSRIPPRQLPIP*PSPSQSGQQSP
Trigger: GGGCGACTGCTGCCCTGACTGTGATGGTGAGGGTCATGGGATAGGGAGCTGCCGGGGTGGGATGCGGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612224.1
ENST00000616669.4
CDS GCA 72 bp GTGTGTCCTCGCAGCTCCACATACAGCAGCGGCTCCTaGAGGAAGGGCAAGGCCACCGGGTGCCCATCCACC +
Preference number: 6 (lower is better)
Translates to: VCPRSSTYSSGS*RKGKATGCPST
Trigger: GGTGGATGGGCACCCGGTGGCCTTGCCCTTCCTGCAGGAGCCGCTGCTGTATGTGGAGCTGCGAGGACACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460528.1
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
ENST00000676619.1
ENST00000678888.1
ENST00000679229.1
CDS GCA 72 bp CATGGCCCCGATGGCAGGTGCAGGCGATGCACGCATTaGTGGGGTCCCGCCAGCTCTCTCCATCTGCCACTC +
Preference number: 6 (lower is better)
Translates to: HGPDGRCRRCTH*WGPASSLHLPL
Trigger: GAGTGGCAGATGGAGAGAGCTGGCGGGACCCCAGCAATGCGTGCATCGCCTGCACCTGCCATCGGGGCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS GCA 72 bp GGCACTCCACATGGCCCCGATGGCAGGTGCAGGCGATaGACGCATTGCTGGGGTCCCGCCAGCTCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: GTPHGPDGRCRR*THCWGPASSLH
Trigger: ATGGAGAGAGCTGGCGGGACCCCAGCAATGCGTGCATCGCCTGCACCTGCCATCGGGGCCATGTGGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610776.4
CDS CCA 72 bp TGCCTGGGAGGGGCCGGGCTGGGTATGGACACAGGCTaGCACATTCTCGCTGGCGGCACTGGATGTGACCCT +
Preference number: 6 (lower is better)
Translates to: CLGGAGLGMDTG*HILAGGTGCDP
Trigger: AGGGTCACATCCAGTGCCGCCAGCGAGAATGTGCCAGCCTGTGTCCATACCCAGCCCGGCCCCTCCCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp TCCTCCAGGATGCAGTCTGGGCACCTGGGGCAACACTaGCCTGGTCCACTCTGGGGCCTGGCACAGGTCGTG +
Preference number: 6 (lower is better)
Translates to: SSRMQSGHLGQH*PGPLWGLAQVV
Trigger: CACGACCTGTGCCAGGCCCCAGAGTGGACCAGGCCAGTGTTGCCCCAGGTGCCCAGACTGCATCCTGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp GGCTCCTGTCAGACAGCGGCAGGTGGTGCAGGCATCTaGGGAGAAGGTCTCCCCGTTGCCGTAGGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: GSCQTAAGGAGI*GEGLPVAVGLA
Trigger: GGCCAGACCTACGGCAACGGGGAGACCTTCTCCCCAGATGCCTGCACCACCTGCCGCTGTCTGACAGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 72 bp AGAACGGGGCCTTCGCACTGCTTGATCCCCGAGACCTaGCCCTCTGACCGTGGGCCAGGTGTGGGCTTAGGG +
Preference number: 6 (lower is better)
Translates to: RTGPSHCLIPET*PSDRGPGVGLG
Trigger: CCCTAAGCCCACACCTGGCCCACGGTCAGAGGGCCAGGTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 72 bp CGCTGTGGCAGTCCTTGGCCAGCACATAGCTGCAACTaGCCTGGAAGTGCAGCAGGCGGCCGTCGAAGGTGC +
Preference number: 6 (lower is better)
Translates to: RCGSPWPAHSCN*PGSAAGGRRRC
Trigger: GCACCTTCGACGGCCGCCTGCTGCACTTCCAGGGCAGTTGCAGCTATGTGCTGGCCAAGGACTGCCACAGCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000492679.5
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
ENST00000676619.1
CDS GCA 72 bp TCCAGTCGCCCCAGCCACTCTCGCAGGGGGTGCCACTaGTCCTGGGAGTTCCCAGCAAGGACTGAGGAATGG +
Preference number: 6 (lower is better)
Translates to: SSRPSHSRRGCH*SWEFPARTEEW
Trigger: CCATTCCTCAGTCCTTGCTGGGAACTCCCAGGAGCAGTGGCACCCCCTGCGAGAGTGGCTGGGGCGACTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000620378.1
CDS GCA 72 bp GCGGGGCTGGGCGCAAGAGCTGATGCACTGGATGCGTaGACAGGTGACGACGCCCTCGTGACACACACAGGA +
Preference number: 6 (lower is better)
Translates to: AGLGARADALDA*TGDDALVTHTG
Trigger: TCCTGTGTGTGTCACGAGGGCGTCGTCACCTGTGCACGCATCCAGTGCATCAGCTCTTGCGCCCAGCCCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CCA 72 bp CACTGCTCCTGGGAGTTCCCAGCAAGGACTGAGGAATaGGCAGTTGTCTGCTGCCCAGGGGGCTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: HCSWEFPARTEE*AVVCCPGGSLG
Trigger: CCCCAGGGAGCCCCCTGGGCAGCAGACAACTGCCCATTCCTCAGTCCTTGCTGGGAACTCCCAGGAGCAGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000620378.1
CDS CCA 72 bp CGCCCCAGCCACTCTCGCAGGGGGTGCCACTGCTCCTaGGAGTTCCCAGCAAGGACTGAGGAATGGGCAGTT +
Preference number: 6 (lower is better)
Translates to: RPSHSRRGCHCS*EFPARTEEWAV
Trigger: AACTGCCCATTCCTCAGTCCTTGCTGGGAACTCCCAGGAGCAGTGGCACCCCCTGCGAGAGTGGCTGGGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000620378.1
CDS CCA 72 bp GGGTGGGGGCAGAGAGCTGGGGGACATGGCTTCTTCTaGCAGCGCATGGAACCTTCCTGGCAGGTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GWGQRAGGHGFF*QRMEPSWQVQR
Trigger: CCTCTGCACCTGCCAGGAAGGTTCCATGCGCTGCCAGAAGAAGCCATGTCCCCCAGCTCTCTGCCCCCACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CAA 90 bp GCCGCATTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTGCTaGATCCCCGAGACCTGGCCCTCTGACCGTGGGCCAGGTGTGGGC +
Preference number: 6 (lower is better)
Translates to: AALSHSSARTGPSHC*IPETWPSDRGPGVG
Trigger: GCCCACACCTGGCCCACGGTCAGAGGGCCAGGTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCTTGCGGAAGAATGACTCAATGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 72 bp CTCACCCACTCACCGGCTGCTCAGGGTCCCCACCTGTaGTACCACCTGGCTGACAGCACTGGCTCCATGCTT +
Preference number: 6 (lower is better)
Translates to: LTHSPAAQGPHL*YHLADSTGSML
Trigger: AAGCATGGAGCCAGTGCTGTCAGCCAGGTGGTAGCACAGGTGGGGACCCTGAGCAGCCGGTGAGTGGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS GCA 72 bp GGAGGCCGTGTTGCTGTTAATGCGCATGTCCCGGAATaGGGCTGGGAGGACTGCGCATGCTCGAAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: GGRVAVNAHVPE*GWEDCACSKGG
Trigger: CCCACCCTTCGAGCATGCGCAGTCCTCCCAGCCGCATTCCGGGACATGCGCATTAACAGCAACACGGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS GCA 72 bp CCCTGGTACTCACAGCCATCGCAGACAGGGCAGCACTaGCCAGGGATCTTGCCTGGGTGTCTGCAGGGCACT +
Preference number: 6 (lower is better)
Translates to: PWYSQPSQTGQH*PGILPGCLQGT
Trigger: AGTGCCCTGCAGACACCCAGGCAAGATCCCTGGGCAGTGCTGCCCTGTCTGCGATGGCTGTGAGTACCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS GCA 72 bp GCCTGTGCTACCACCTGGCTGACAGCACTGGCTCCATaGTTGCTGGGCCTGGCCCCTCGGACCGAAAAACTG +
Preference number: 6 (lower is better)
Translates to: ACATTWLTALAP*LLGLAPRTEKL
Trigger: CAGTTTTTCGGTCCGAGGGGCCAGGCCCAGCAAGCATGGAGCCAGTGCTGTCAGCCAGGTGGTAGCACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000676717.1
CDS CCA 72 bp ACGCAGGCGGTGCAGGGCCGACCATCAGGCTCCCACTaGACTCCCTCAGCAAACTCCTCTCCATCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: TQAVQGRPSGSH*TPSANSSPSSS
Trigger: TGAGCTGGATGGAGAGGAGTTTGCTGAGGGAGTCCAGTGGGAGCCTGATGGTCGGCCCTGCACCGCCTGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp CTCTCCAAGCAGTTGAGCTCTGAACACGAGGGCCCCTaGCACTGCACGGCTCCTGTCAGACAGCGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: LSKQLSSEHEGP*HCTAPVRQRQV
Trigger: CACCTGCCGCTGTCTGACAGGAGCCGTGCAGTGCCAGGGGCCCTCGTGTTCAGAGCTCAACTGCTTGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CAA 72 bp CCAGGCACCGGCAGATTCGGCAGGGGTCCCCAGGTGTaGTCCACTCTTGGCCATGTTCCCAGTGAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: PGTGRFGRGPQV*STLGHVPSESH
Trigger: GTGGCTCTCACTGGGAACATGGCCAAGAGTGGACAACACCTGGGGACCCCTGCCGAATCTGCCGGTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CAA 90 bp CAGGCACCGGCAGATTCGGCAGGGGTCCCCAGGTGTTGTCCACTCTaGGCCATGTTCCCAGTGAGAGCCACCTTCTGTGCAGCCCTCCGT +
Preference number: 6 (lower is better)
Translates to: QAPADSAGVPRCCPL*AMFPVRATFCAALR
Trigger: ACGGAGGGCTGCACAGAAGGTGGCTCTCACTGGGAACATGGCCAAGAGTGGACAACACCTGGGGACCCCTGCCGAATCTGCCGGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616669.4
CDS CAA 90 bp CAGGCACCGGCAGATTCGGCAGGGGTCCCCAGGTGTTGTCCACTCTaGGCCATGTTCCCAGTGAGAGCCACCTTCTGTGCAGCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: QAPADSAGVPRCCPL*AMFPVRATFCAALA
Trigger: TGCCAAGGCTGCACAGAAGGTGGCTCTCACTGGGAACATGGCCAAGAGTGGACAACACCTGGGGACCCCTGCCGAATCTGCCGGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
CDS CAA 90 bp TGTGACCCTCCAGGCACCGGCAGATTCGGCAGGGGTCCCCAGGTGTaGTCCACTCTTGGCCATGTTCCCAGTGAGAGCCACCTTCTGTGC +
Preference number: 6 (lower is better)
Translates to: CDPPGTGRFGRGPQV*STLGHVPSESHLLC
Trigger: GCACAGAAGGTGGCTCTCACTGGGAACATGGCCAAGAGTGGACAACACCTGGGGACCCCTGCCGAATCTGCCGGTGCCTGGAGGGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CAA 90 bp CAGGCACCGGCAGATTCGGCAGGGGTCCCCAGGTGTTGTCCACTCTaGGCCATGTTCCCAGTGAGAGCCACCTTCTGTGCAGCGGCAGAT +
Preference number: 6 (lower is better)
Translates to: QAPADSAGVPRCCPL*AMFPVRATFCAAAD
Trigger: ATCTGCCGCTGCACAGAAGGTGGCTCTCACTGGGAACATGGCCAAGAGTGGACAACACCTGGGGACCCCTGCCGAATCTGCCGGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620378.1
CDS GCA 72 bp CCCAGGGTCCATCATGGCCCCAGGCACTGTGTTCAGTaGGGCCAGTGCTGTAGGGGAGGAGAATGGACAGGT +
Preference number: 6 (lower is better)
Translates to: PRVHHGPRHCVQ*GQCCRGGEWTG
Trigger: ACCTGTCCATTCTCCTCCCCTACAGCACTGGCCGCACTGAACACAGTGCCTGGGGCCATGATGGACCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS GCA 72 bp ACCTGTGCTACCACCTGGCTGACAGCACTGGCTCCATaGTTGCTGGGCCTGGCCCCTCGGACCGAAAAACTG +
Preference number: 6 (lower is better)
Translates to: TCATTWLTALAP*LLGLAPRTEKL
Trigger: CAGTTTTTCGGTCCGAGGGGCCAGGCCCAGCAAGCATGGAGCCAGTGCTGTCAGCCAGGTGGTAGCACAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460528.1
ENST00000492679.5
ENST00000678888.1
ENST00000679229.1
CDS GCA 72 bp AGGCTGTGGCTCGCAGATGCACACTTCACAGGGGTCTaGCCCAGGCTGGAAGCTCTCCCCAGGCTCGTACTT +
Preference number: 6 (lower is better)
Translates to: RLWLADAHFTGV*PRLEALPRLVL
Trigger: AAGTACGAGCCTGGGGAGAGCTTCCAGCCTGGGGCAGACCCCTGTGAAGTGTGCATCTGCGAGCCACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS GCA 72 bp TCCTGTGCTACCACCTGGCTGACAGCACTGGCTCCATaGTTGCTGGGCCTGGCCCCTCGGACCGAAAAACTG +
Preference number: 6 (lower is better)
Translates to: SCATTWLTALAP*LLGLAPRTEKL
Trigger: CAGTTTTTCGGTCCGAGGGGCCAGGCCCAGCAAGCATGGAGCCAGTGCTGTCAGCCAGGTGGTAGCACAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678812.1
CDS GCA 72 bp CTCAGGGGTGTCCATCCTTGGTGGTCTTTGAAGTTCTaGTCTCTCCTGGCCCAGGTGCGGGTCCGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: LRGVHPWWSLKF*SLLAQVRVRAQ
Trigger: CTGGGCTCGGACCCGCACCTGGGCCAGGAGAGAGCAGAACTTCAAAGACCACCAAGGATGGACACCCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000678888.1
CDS GCA 72 bp ACAAGAACCGCCATCCCAATTTCCGCGTGTGGGCTCTaGAGGTCCTCCAGGGCTCTCCCACCCTTGGTCTGC +
Preference number: 6 (lower is better)
Translates to: TRTAIPISACGL*RSSRALPPLVC
Trigger: GCAGACCAAGGGTGGGAGAGCCCTGGAGGACCTGCAGAGCCCACACGCGGAAATTGGGATGGCGGTTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676717.1
CDS CCA 72 bp ACTGGCCTGGTCCACTCTGGGGCCTGGCACAGGTCGTaGGAGGGCAGTCAACCAAGGAGCATGTCACAGTTC +
Preference number: 6 (lower is better)
Translates to: TGLVHSGAWHRS*EGSQPRSMSQF
Trigger: GAACTGTGACATGCTCCTTGGTTGACTGCCCTCCCACGACCTGTGCCAGGCCCCAGAGTGGACCAGGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CAA 72 bp AGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTGCTaGATCCCCGAGACCTGGCCCTCTGACCGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: SHSSARTGPSHC*IPETWPSDRGP
Trigger: TGGCCCACGGTCAGAGGGCCAGGTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCTTGCGGAAGAATGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CAA 90 bp TCGGGCCTGTCTTTACGGCGCAGGCGTATTCACATGGAGGCCGTGTaGCTGTTAATGCGCATGTCCCGGAATGCGGCTGGGAGGACTGCG +
Preference number: 6 (lower is better)
Translates to: SGLSLRRRRIHMEAV*LLMRMSRNAAGRTA
Trigger: CGCAGTCCTCCCAGCCGCATTCCGGGACATGCGCATTAACAGCAACACGGCCTCCATGTGAATACGCCTGCGCCGTAAAGACAGGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS CAA 90 bp CTCATGCTCACAGTCAGAGCATTGAGGACAGCAGTCATGGGGCCCTaGGCGGGGCTGGGCGCAAGAGCTGATGCACTGGATGCGTGCACA +
Preference number: 6 (lower is better)
Translates to: LMLTVRALRTAVMGP*AGLGARADALDACT
Trigger: TGTGCACGCATCCAGTGCATCAGCTCTTGCGCCCAGCCCCGCCAAGGGCCCCATGACTGCTGTCCTCAATGCTCTGACTGTGAGCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS TCA 72 bp GAGCCACCACGCCTGGCCTCGTGGGCATTTTCTAGCTaGGGAAAGGTAAACTCAGAGCCCACGGGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: EPPRLASWAFSS*GKVNSEPTGVV
Trigger: GACCACCCCCGTGGGCTCTGAGTTTACCTTTCCTCAGCTAGAAAATGCCCACGAGGCCAGGCGTGGTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS GCA 72 bp TGTGGAGATTCAAACCCAGCCCTGTCTCTAAAACCCTaGCCCTTCCGCTTGCCCTCACCACAGCAGGGCCCC +
Preference number: 6 (lower is better)
Translates to: CGDSNPALSLKP*PFRLPSPQQGP
Trigger: GGGGCCCTGCTGTGGTGAGGGCAAGCGGAAGGGGCAGGGTTTTAGAGACAGGGCTGGGTTTGAATCTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS GCA 72 bp TGGCCTTCAGTATCGGCTGCTCAGGGTCCCCACCTGTaGTACCACCTGGCTGACAGCACTGGCTCCATGCTT +
Preference number: 6 (lower is better)
Translates to: WPSVSAAQGPHL*YHLADSTGSML
Trigger: AAGCATGGAGCCAGTGCTGTCAGCCAGGTGGTAGCACAGGTGGGGACCCTGAGCAGCCGATACTGAAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492679.5
CDS GCA 72 bp TGGGGACCAGCTGCCTCCAGGACGCTTTCCCTCCTGTaGCCAGGCTGGATTCGGTCTCCTTCCTCTGAATTC +
Preference number: 6 (lower is better)
Translates to: WGPAASRTLSLL*PGWIRSPSSEF
Trigger: GAATTCAGAGGAAGGAGACCGAATCCAGCCTGGGCACAGGAGGGAAAGCGTCCTGGAGGCAGCTGGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616669.4
CDS GCA 72 bp TTGAGTCATTCTTCCGCAAGAACGGGGCCTTCGCACTaGTTGATCCCCGAGACCTGGCCCTCTGACCGTGGG +
Preference number: 6 (lower is better)
Translates to: LSHSSARTGPSH*LIPETWPSDRG
Trigger: CCCACGGTCAGAGGGCCAGGTCTCGGGGATCAAGCAGTGCGAAGGCCCCGTTCTTGCGGAAGAATGACTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 72 bp GGATTCCTAGGGCTGTGCAGACAGACAGGGCTCCCATaGTCTGCGTGTCCCTCCCTCAGGAACCCATGCTTG +
Preference number: 6 (lower is better)
Translates to: GFLGLCRQTGLP*SACPSLRNPCL
Trigger: CAAGCATGGGTTCCTGAGGGAGGGACACGCAGAGCATGGGAGCCCTGTCTGTCTGCACAGCCCTAGGAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 72 bp CCATCCCAATTTCCGGCTGCTCAGGGTCCCCACCTGTaGTACCACCTGGCTGACAGCACTGGCTCCATGCTT +
Preference number: 6 (lower is better)
Translates to: PSQFPAAQGPHL*YHLADSTGSML
Trigger: AAGCATGGAGCCAGTGCTGTCAGCCAGGTGGTAGCACAGGTGGGGACCCTGAGCAGCCGGAAATTGGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679229.1
CDS TCA 72 bp AGGCCCCGCTCTTGGAGTCTGAAGGTCTCCTGGCTCTaGTACTGGTGTCCCTGGTACTCACAGCCATCGCAG +
Preference number: 6 (lower is better)
Translates to: RPRSWSLKVSWL*YWCPWYSQPSQ
Trigger: CTGCGATGGCTGTGAGTACCAGGGACACCAGTATCAGAGCCAGGAGACCTTCAGACTCCAAGAGCGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS TCA 72 bp CTCTCAGACTCAGGGGTGTCCATCCTTGGTGGTCTTTaGAGTTCTGCTCTCTCCTGGCCCAGGTGCGGGTCC +
Preference number: 6 (lower is better)
Translates to: LSDSGVSILGGL*SSALSWPRCGS
Trigger: GGACCCGCACCTGGGCCAGGAGAGAGCAGAACTTCAAAGACCACCAAGGATGGACACCCCTGAGTCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000678888.1
CDS GCA 72 bp CAAAGACAGATGACAGGAGGAGCTGCCCACAGCTCCTaGATGAGGGCACCTTCTCCTGCTGCCATCCCTGCA +
Preference number: 6 (lower is better)
Translates to: QRQMTGGAAHSS*MRAPSPAAIPA
Trigger: TGCAGGGATGGCAGCAGGAGAAGGTGCCCTCATGCAGGAGCTGTGGGCAGCTCCTCCTGTCATCTGTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS GCA 72 bp CCTTCTGTGCAGCCCTCCGTGTCAGGGCCACGCCTGTaGTTGATTTCTCCCCTCTTCCTAGAAGGCTCACTG +
Preference number: 6 (lower is better)
Translates to: PSVQPSVSGPRL*LISPLFLEGSL
Trigger: CAGTGAGCCTTCTAGGAAGAGGGGAGAAATCAAGCACAGGCGTGGCCCTGACACGGAGGGCTGCACAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616669.4
CDS GCA 72 bp AGGAAAGGTGTGGAACAGGCATGTGCCAGGCAGGGCTaGTGGGCGATGTTGCTGCACGTCCCATTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: RKGVEQACARQG*WAMLLHVPLLS
Trigger: AGACAGCAATGGGACGTGCAGCAACATCGCCCAGCAGCCCTGCCTGGCACATGCCTGTTCCACACCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 72 bp GACAGGTGGAGGCTCCCCTTGGAAGAAACACCACCCTaGCCAAGGCCAAGTGGATACATTCTGTGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: DRWRLPLEETPP*PRPSGYILCQP
Trigger: GGGCTGGCACAGAATGTATCCACTTGGCCTTGGCCAGGGTGGTGTTTCTTCCAAGGGGAGCCTCCACCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS CAA 72 bp GCAGATTCGGCAGGGGTCCCCAGGTGTTGTCCACTCTaGGCCATGTTCCCAGTGAGAGCCACCTTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: ADSAGVPRCCPL*AMFPVRATFCA
Trigger: TGCACAGAAGGTGGCTCTCACTGGGAACATGGCCAAGAGTGGACAACACCTGGGGACCCCTGCCGAATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CAA 72 bp CCGCAGGTCACGAAGCCTCCAAGACAGGTACACAGGTaGCAGGGTTCTCGGGGGTCTGGGAACTCCTGGTTA +
Preference number: 6 (lower is better)
Translates to: PQVTKPPRQVHR*QGSRGSGNSWL
Trigger: TAACCAGGAGTTCCCAGACCCCCGAGAACCCTGCAACCTGTGTACCTGTCTTGGAGGCTTCGTGACCTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000613019.4
ENST00000620378.1
CDS CAA 72 bp TCTGTGCAGCCCTCCGTGTCAGGGCCACGCCTGTGCTaGATTTCTCCCCTCTTCCTAGAAGGCTCACTGCCT +
Preference number: 6 (lower is better)
Translates to: SVQPSVSGPRLC*ISPLFLEGSLP
Trigger: AGGCAGTGAGCCTTCTAGGAAGAGGGGAGAAATCAAGCACAGGCGTGGCCCTGACACGGAGGGCTGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616669.4
CDS GCA 72 bp ACACCACCCTGGCCAAGGCCAAGTGGATACATTCTGTaGCAGCCCTGGGCAAAGACAGATGACAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: TPPWPRPSGYIL*QPWAKTDDRRS
Trigger: GCTCCTCCTGTCATCTGTCTTTGCCCAGGGCTGGCACAGAATGTATCCACTTGGCCTTGGCCAGGGTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS GCA 72 bp AATCATCCCTTTGAGGACTCAGCAATGACCAGAGGGTaGTGGGAAGGGCGAGCACTACTTCGCAGGCACGGG +
Preference number: 6 (lower is better)
Translates to: NHPFEDSAMTRG*WEGRALLRRHG
Trigger: CCCGTGCCTGCGAAGTAGTGCTCGCCCTTCCCAGCACCCTCTGGTCATTGCTGAGTCCTCAAAGGGATGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 72 bp TGGCCAAGGCCAAGTGGATACATTCTGTGCCAGCCCTaGGCAAAGACAGATGACAGGAGGAGCTGCCCACAG +
Preference number: 6 (lower is better)
Translates to: WPRPSGYILCQP*AKTDDRRSCPQ
Trigger: CTGTGGGCAGCTCCTCCTGTCATCTGTCTTTGCCCAGGGCTGGCACAGAATGTATCCACTTGGCCTTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS CCA 72 bp TGTGTTCAGTGCGGCCAGTGCTGTAGGGGAGGAGAATaGACAGGTGGAGGCTCCCCTTGGAAGAAACACCAC +
Preference number: 6 (lower is better)
Translates to: CVQCGQCCRGGE*TGGGSPWKKHH
Trigger: GTGGTGTTTCTTCCAAGGGGAGCCTCCACCTGTCCATTCTCCTCCCCTACAGCACTGGCCGCACTGAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS CCA 72 bp GGTCCTCCTCTCAGACTCAGGGGTGTCCATCCTTGGTaGTCTTTGAAGTTCTGCTCTCTCCTGGCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: GPPLRLRGVHPW*SLKFCSLLAQV
Trigger: CACCTGGGCCAGGAGAGAGCAGAACTTCAAAGACCACCAAGGATGGACACCCCTGAGTCTGAGAGGAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000678888.1
CDS CCA 72 bp GAGGGTCCTCCTCTCAGACTCAGGGGTGTCCATCCTTaGTGGTCTTTGAAGTTCTGCTCTCTCCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: EGPPLRLRGVHP*WSLKFCSLLAQ
Trigger: CTGGGCCAGGAGAGAGCAGAACTTCAAAGACCACCAAGGATGGACACCCCTGAGTCTGAGAGGAGGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676619.1
ENST00000678888.1
CDS CAA 72 bp TCTTTACGGCGCAGGCGTATTCACATGGAGGCCGTGTaGCTGTTAATGCGCATGTCCCGGAATGCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SLRRRRIHMEAV*LLMRMSRNAAG
Trigger: CCCAGCCGCATTCCGGGACATGCGCATTAACAGCAACACGGCCTCCATGTGAATACGCCTGCGCCGTAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS CAA 72 bp GAACAGGCATGTGCCAGGCAGGGCTGCTGGGCGATGTaGCTGCACGTCCCATTGCTGTCTGTGCTCATGAAT +
Preference number: 6 (lower is better)
Translates to: EQACARQGCWAM*LHVPLLSVLMN
Trigger: ATTCATGAGCACAGACAGCAATGGGACGTGCAGCAACATCGCCCAGCAGCCCTGCCTGGCACATGCCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CAA 90 bp GGGATGCCCCTGACCCTTAAAGACCCCATATCTGCTGGTGGAGTGTaGGACACTCCTCCCTTTATCCATCTGCGAGATCCTCCACCCTCC +
Preference number: 6 (lower is better)
Translates to: GMPLTLKDPISAGGV*DTPPFIHLRDPPPS
Trigger: GGAGGGTGGAGGATCTCGCAGATGGATAAAGGGAGGAGTGTCCAACACTCCACCAGCAGATATGGGGTCTTTAAGGGTCAGGGGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679229.1
CDS GCA 72 bp CCCCCAGTGAAGCAAGAACTGGTCTCCTGCAAGATGTaGCGCATTGAGTCATTCTTCCGCAAGAACGGGGCC +
Preference number: 6 (lower is better)
Translates to: PPVKQELVSCKM*RIESFFRKNGA
Trigger: GGCCCCGTTCTTGCGGAAGAATGACTCAATGCGGCACATCTTGCAGGAGACCAGTTCTTGCTTCACTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 72 bp CCCTTCCCATTCCCCACTTTACAGACGAGAAATCTGTaGCCCAGAGGAGGCTGGTGGTGGCTTAAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PFPFPTLQTRNL*PRGGWWWLKRL
Trigger: CAGCCTCTTAAGCCACCACCAGCCTCCTCTGGGCCACAGATTTCTCGTCTGTAAAGTGGGGAATGGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS TCA 72 bp TGTGGCCCAGAGGAGGCTGGTGGTGGCTTAAGAGGCTaGGCCGAGATTAGAAATCGGGCTCAGAACTCAGAA +
Preference number: 6 (lower is better)
Translates to: CGPEEAGGGLRG*AEIRNRAQNSE
Trigger: TTCTGAGTTCTGAGCCCGATTTCTAATCTCGGCTCAGCCTCTTAAGCCACCACCAGCCTCCTCTGGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS GCA 72 bp GATAAAGACCCAGACCCTGCCCTTGAGATGAGTAACTaGGTCTCTTCTCTGGGGTCTCGGCGTCTAACAGCG +
Preference number: 6 (lower is better)
Translates to: DKDPDPALEMSN*VSSLGSRRLTA
Trigger: CGCTGTTAGACGCCGAGACCCCAGAGAAGAGACGCAGTTACTCATCTCAAGGGCAGGGTCTGGGTCTTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS GCA 72 bp TCCATCCTGACAGTGGCAGGCATGGCAAGGGCTGTCTaGATCCGTGAAGTTCTGCCCATTGGCATACACTTG +
Preference number: 6 (lower is better)
Translates to: SILTVAGMARAV*IREVLPIGIHL
Trigger: CAAGTGTATGCCAATGGGCAGAACTTCACGGATGCAGACAGCCCTTGCCATGCCTGCCACTGTCAGGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610776.4
ENST00000611280.4
ENST00000612224.1
ENST00000613019.4
ENST00000616669.4
ENST00000620378.1
CDS CCA 72 bp CACCAAGCTAACTTTTCTTTATCCTTAAGGGCCACCTaGGGACCAGCTGCCTCCAGGACGCTTTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: HQANFSLSLRAT*GPAASRTLSLL
Trigger: CAGGAGGGAAAGCGTCCTGGAGGCAGCTGGTCCCCAGGTGGCCCTTAAGGATAAAGAAAAGTTAGCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616669.4
CDS TCA 72 bp CTCCCACAATACATTCTTCACAGTTCAAGAGGGGAATaGAATCCAGCCTTCGGCTCCATGCCCCGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: LPQYILHSSRGE*NPAFGSMPRCR
Trigger: CCTGCACCGGGGCATGGAGCCGAAGGCTGGATTTCATTCCCCTCTTGAACTGTGAAGAATGTATTGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492679.5
ENST00000679229.1
CDS TCA 72 bp GCGCTTGTTGAACGAATGAACCAAGGAACGAGTGAATaGACGAATGAATGCCCGCGAAGGACGTGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: ALVERMNQGTSE*TNECPRRTWCR
Trigger: GCGGCACCACGTCCTTCGCGGGCATTCATTCGTTCATTCACTCGTTCCTTGGTTCATTCGTTCAACAAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS TCA 72 bp ACATACACGATAAAGACCCAGACCCTGCCCTTGAGATaGGTAACTGCGTCTCTTCTCTGGGGTCTCGGCGTC +
Preference number: 6 (lower is better)
Translates to: TYTIKTQTLPLR*VTASLLWGLGV
Trigger: GACGCCGAGACCCCAGAGAAGAGACGCAGTTACTCATCTCAAGGGCAGGGTCTGGGTCTTTATCGTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492679.5
ENST00000678812.1
ENST00000679229.1
CDS TCA 72 bp GAAGCAAGAACTGGTCTCCTGCAAGATGTGCCGCATTaGGTCATTCTTCCGCAAGAACGGGGCCTTCGCACT +
Preference number: 6 (lower is better)
Translates to: EARTGLLQDVPH*VILPQERGLRT
Trigger: AGTGCGAAGGCCCCGTTCTTGCGGAAGAATGACTCAATGCGGCACATCTTGCAGGAGACCAGTTCTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS TCA 72 bp CACGTCCCATTGCTGTCTGTGCTCATGAATGTCAAGTaGGACTCCTCAGCCCTGTACCCTTCTCCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: HVPLLSVLMNVK*DSSALYPSPAA
Trigger: AGCAGCTGGAGAAGGGTACAGGGCTGAGGAGTCTCACTTGACATTCATGAGCACAGACAGCAATGGGACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 72 bp CAAGTGAGACTCCTCAGCCCTGTACCCTTCTCCAGCTaGTTGAGTGTCTTGCAGAAAAGGTGGATGGTTGGG +
Preference number: 6 (lower is better)
Translates to: QVRLLSPVPFSS*LSVLQKRWMVG
Trigger: CCCAACCATCCACCTTTTCTGCAAGACACTCAAGCAGCTGGAGAAGGGTACAGGGCTGAGGAGTCTCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 72 bp CCTTCAGGTCTCAGCTTAGATCTGAAGCAAGCTTCTTaGGGAAGGGTTCTTTGGACGCCCCCTCTCTCCATG +
Preference number: 6 (lower is better)
Translates to: PSGLSLDLKQAS*GRVLWTPPLSM
Trigger: CATGGAGAGAGGGGGCGTCCAAAGAACCCTTCCCCAAGAAGCTTGCTTCAGATCTAAGCTGAGACCTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678812.1
ENST00000679229.1
CDS CAA 72 bp GTGAGACTCCTCAGCCCTGTACCCTTCTCCAGCTGCTaGAGTGTCTTGCAGAAAAGGTGGATGGTTGGGGAT +
Preference number: 6 (lower is better)
Translates to: VRLLSPVPFSSC*SVLQKRWMVGD
Trigger: ATCCCCAACCATCCACCTTTTCTGCAAGACACTCAAGCAGCTGGAGAAGGGTACAGGGCTGAGGAGTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS TCA 72 bp CGATGTTGCTGCACGTCCCATTGCTGTCTGTGCTCATaGATGTCAAGTGAGACTCCTCAGCCCTGTACCCTT +
Preference number: 6 (lower is better)
Translates to: RCCCTSHCCLCS*MSSETPQPCTL
Trigger: AAGGGTACAGGGCTGAGGAGTCTCACTTGACATTCATGAGCACAGACAGCAATGGGACGTGCAGCAACATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS TCA 72 bp GCTCTCCCTGTCCCTGAGGTTGCATTCAGGCCTTTCTaGAACTATCAGACCTGCAAGTTGCCCTCTTGCTTT +
Preference number: 6 (lower is better)
Translates to: ALPVPEVAFRPF*NYQTCKLPSCF
Trigger: AAAGCAAGAGGGCAACTTGCAGGTCTGATAGTTTCAGAAAGGCCTGAATGCAACCTCAGGGACAGGGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS TCA 72 bp CACTTTCTATTTCTTCCCACAAAGTGGCTACTCCACTaGCGGATTCCTAGGGCTGTGCAGACAGACAGGGCT +
Preference number: 6 (lower is better)
Translates to: HFLFLPTKWLLH*RIPRAVQTDRA
Trigger: AGCCCTGTCTGTCTGCACAGCCCTAGGAATCCGTCAGTGGAGTAGCCACTTTGTGGGAAGAAATAGAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS GCA 72 bp TTCCGGGGATTCACTTTCTCATGGGCATTCGGGCCTTaGAGAGGACAAAGCACAATTAGGGTCCGGATTAGA +
Preference number: 6 (lower is better)
Translates to: FRGFTFSWAFGP*RGQSTIRVRIR
Trigger: TCTAATCCGGACCCTAATTGTGCTTTGTCCTCTGCAAGGCCCGAATGCCCATGAGAAAGTGAATCCCCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460528.1
ENST00000678812.1
CDS CCA 72 bp CTTGGGGAAGGGTTCTTTGGACGCCCCCTCTCTCCATaGGTTAGTTACCATGGATGTGTGCTTCCATATACT +
Preference number: 6 (lower is better)
Translates to: LGEGFFGRPLSP*VSYHGCVLPYT
Trigger: AGTATATGGAAGCACACATCCATGGTAACTAACCCATGGAGAGAGGGGGCGTCCAAAGAACCCTTCCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678812.1
ENST00000679229.1
CDS CAA 72 bp CTTAGATCTGAAGCAAGCTTCTTGGGGAAGGGTTCTTaGGACGCCCCCTCTCTCCATGGGTTAGTTACCATG +
Preference number: 6 (lower is better)
Translates to: LRSEASFLGKGS*DAPSLHGLVTM
Trigger: CATGGTAACTAACCCATGGAGAGAGGGGGCGTCCAAAGAACCCTTCCCCAAGAAGCTTGCTTCAGATCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678812.1
ENST00000679229.1
CDS CAA 72 bp CTATTTAAATCCATGAGATCTCCTAGGGAGCTCAAGTaGCTGGAATCTGATGGGAGTGGGGGCAGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: LFKSMRSPRELK*LESDGSGGRRA
Trigger: AGCCCTCCTGCCCCCACTCCCATCAGATTCCAGCAACTTGAGCTCCCTAGGAGATCTCATGGATTTAAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CAA 72 bp CTGACCCTTAAAGACCCCATATCTGCTGGTGGAGTGTaGGACACTCCTCCCTTTATCCATCTGCGAGATCCT +
Preference number: 6 (lower is better)
Translates to: LTLKDPISAGGV*DTPPFIHLRDP
Trigger: AGGATCTCGCAGATGGATAAAGGGAGGAGTGTCCAACACTCCACCAGCAGATATGGGGTCTTTAAGGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679229.1
CDS GCA 72 bp AACACCGTCTTGTCCTCACTTCTATCCCCTTCATCCTaGAGGTCCTTCAGGTCTCAGCTTAGATCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: NTVLSSLLSPSS*RSFRSQLRSEA
Trigger: TGCTTCAGATCTAAGCTGAGACCTGAAGGACCTGCAGGATGAAGGGGATAGAAGTGAGGACAAGACGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678812.1
ENST00000679229.1
CDS CAA 90 bp GGGTCCGGATTAGAAGTGTACACCCTTATTCTACGAATTTACGAGTaGTGTTTCCTGCTGGGGGCAGGGGGCAAATTACTCTTCCACATG +
Preference number: 6 (lower is better)
Translates to: GSGLEVYTLILRIYE*CFLLGAGGKLLFHM
Trigger: CATGTGGAAGAGTAATTTGCCCCCTGCCCCCAGCAGGAAACACAACTCGTAAATTCGTAGAATAAGGGTGTACACTTCTAATCCGGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS CCA 72 bp AATGGTAGAATCTGGCACATGAGTTGGGCATCTGTTTaGTTATCCTGTGGTAGTGGCCTGAGGGATCAGCAA +
Preference number: 6 (lower is better)
Translates to: NGRIWHMSWASV*LSCGSGLRDQQ
Trigger: TTGCTGATCCCTCAGGCCACTACCACAGGATAACCAAACAGATGCCCAACTCATGTGCCAGATTCTACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS TCA 72 bp GTTGGGCATCTGTTTGGTTATCCTGTGGTAGTGGCCTaGGGGATCAGCAATAGAGCTGAAATCAATTCAGGA +
Preference number: 6 (lower is better)
Translates to: VGHLFGYPVVVA*GISNRAEINSG
Trigger: TCCTGAATTGATTTCAGCTCTATTGCTGATCCCTCAGGCCACTACCACAGGATAACCAAACAGATGCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS TCA 72 bp GTGGCTTTTTCAGGGGAAATGGTAGAATCTGGCACATaGGTTGGGCATCTGTTTGGTTATCCTGTGGTAGTG +
Preference number: 6 (lower is better)
Translates to: VAFSGEMVESGT*VGHLFGYPVVV
Trigger: CACTACCACAGGATAACCAAACAGATGCCCAACTCATGTGCCAGATTCTACCATTTCCCCTGAAAAAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CCA 72 bp GTAGGCAGTGGCTTTTTCAGGGGAAATGGTAGAATCTaGCACATGAGTTGGGCATCTGTTTGGTTATCCTGT +
Preference number: 6 (lower is better)
Translates to: VGSGFFRGNGRI*HMSWASVWLSC
Trigger: ACAGGATAACCAAACAGATGCCCAACTCATGTGCCAGATTCTACCATTTCCCCTGAAAAAGCCACTGCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676619.1
CDS CAA 72 bp TTAGAAGTGTACACCCTTATTCTACGAATTTACGAGTaGTGTTTCCTGCTGGGGGCAGGGGGCAAATTACTC +
Preference number: 6 (lower is better)
Translates to: LEVYTLILRIYE*CFLLGAGGKLL
Trigger: GAGTAATTTGCCCCCTGCCCCCAGCAGGAAACACAACTCGTAAATTCGTAGAATAAGGGTGTACACTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460528.1
CDS GCA 72 bp CTTTCCACCTCACTAGGCAGTATCATCATTAACTTTTaGATTCCTTTAACTGAACAAACGTGTGTTACTTGT +
Preference number: 6 (lower is better)
Translates to: LSTSLGSIIINF*IPLTEQTCVTC
Trigger: ACAAGTAACACACGTTTGTTCAGTTAAAGGAATGCAAAAGTTAATGATGATACTGCCTAGTGAGGTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678812.1
ENST00000679229.1