RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNV1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164794

Ensembl transcript IDs: ENST00000297404.1, ENST00000524391.6

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACATGTTCTCACTTATAAGTGGGAGCTAAATGATGAGAGCACATaGACACATAGAGGGAAACAACACACATTGGGGCCTATCAGAGGG +
Preference number: 1 (lower is better)
Translates to: PHVLTYKWELNDEST*THRGKQHTLGPIRG
Trigger: CCCTCTGATAGGCCCCAATGTGTGTTGTTTCCCTCTATGTGTTCATGTGCTCTCATCATTTAGCTCCCACTTATAAGTGAGAACATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR TCA 90 bp TCTAACTTCTACTTTCCCTTCAGATTGTGGAAGGGATTTATACTATaGCTAGTGGCCCTGTGCCACAATCTAGCACCCATGTATGTGTGT +
Preference number: 1 (lower is better)
Translates to: SNFYFPFRLWKGFIL*LVALCHNLAPMYVC
Trigger: ACACACATACATGGGTGCTAGATTGTGGCACAGGGCCACTAGTCATAGTATAAATCCCTTCCACAATCTGAAGGGAAAGTAGAAGTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR TCA 90 bp AATGTATGTATACACCATGAAGTACTATCCAGCCATATGAAAGAATaGGATCATGTCATTTGCAGGGACATGGATGGAGCTGGAGGCTAT +
Preference number: 1 (lower is better)
Translates to: NVCIHHEVLSSHMKE*DHVICRDMDGAGGY
Trigger: ATAGCCTCCAGCTCCATCCATGTCCCTGCAAATGACATGATCTCATTCTTTCATATGGCTGGATAGTACTTCATGGTGTATACATACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR TCA 90 bp ATAAAGAAAATGTATGTATACACCATGAAGTACTATCCAGCCATATaGAAGAATGAGATCATGTCATTTGCAGGGACATGGATGGAGCTG +
Preference number: 1 (lower is better)
Translates to: IKKMYVYTMKYYPAI*KNEIMSFAGTWMEL
Trigger: CAGCTCCATCCATGTCCCTGCAAATGACATGATCTCATTCTTTCATATGGCTGGATAGTACTTCATGGTGTATACATACATTTTCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR GCA 90 bp AATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGTACTaGAATCTAAGCAGTTTTGGGATTCCCACCTCTTATAGTAATAAT +
Preference number: 1 (lower is better)
Translates to: NEDVQLLKSLCRLMY*NLSSFGIPTSYSNN
Trigger: ATTATTACTATAAGAGGTGGGAATCCCAAAACTGCTTAGATTGCAGTACATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR-3UTR TCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATCGCAGGAGAATGGTGTaGACCCAAGAGGTGGAGCTT +
Preference number: 2 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDRRRMV*TQEVEL
Trigger: AAGCTCCACCTCTTGGGTTCACACCATTCTCCTGCG...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR-3UTR CCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATGTTGACGCAGGAGAATaGTGTGAACCCAAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDVDAGE*CEPKRW
Trigger: CCACCTCTTGGGTTCACACCATTCTCCTGCGTCAAC...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR-3UTR CCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATTCATTTGCAGGGACATaGATGGAGCTGGAGGCTATT +
Preference number: 2 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDSFAGT*MELEAI
Trigger: AATAGCCTCCAGCTCCATCCATGTCCCTGCAAATGA...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR-3UTR CCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATATGCTGGCGAAGTTATaGAGCAATTGGAACGCATAT +
Preference number: 2 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDMLAKL*SNWNAY
Trigger: ATATGCGTTCCAATTGCTCCATAACTTCGCCAGCAT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR CAA 90 bp ACTACACTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTaGTGTAGACTCATGTACTGCAATCTAAGCAGTTTTGGGATTCCC +
Preference number: 2 (lower is better)
Translates to: TTLSWENEDVQLLKS*CRLMYCNLSSFGIP
Trigger: GGGAATCCCAAAACTGCTTAGATTGCAGTACATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAGTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR-3UTR TCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCACTCAGTTGGGAGAATaGAGATGTGCAATTGTTGAA +
Preference number: 2 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSTQLGE*RCAIVE
Trigger: TTCAACAATTGCACATCTTCATTCTCCCAACTGAGT...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR-3UTR GCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCTCTTTCTCTGGGCTATaGAGTTTACCTTCCATTTTT +
Preference number: 2 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSSFSGL*SLPSIF
Trigger: AAAAATGGAAGGTAAACTGCATAGCCCAGAGAAAGA...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR-3UTR CCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCTCTGCCCATCAAATATaGGTTTTCTCTTGTAAAGCT +
Preference number: 2 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSSAHQI*VFSCKA
Trigger: AGCTTTACAAGAGAAAACCCATATTTGATGGGCAGA...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR-3UTR TCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGAATGCCTGCAAAGTTTaGACATTTGCTATTTACCCC +
Preference number: 2 (lower is better)
Translates to: HAYQKTGGSTCDISLILRNACKV*TFAIYP
Trigger: GGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATT...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR-3UTR TCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGAACATCTCACCCCCATaGAATGTTAATACCACAGAT +
Preference number: 2 (lower is better)
Translates to: HAYQKTGGSTCDISLILRNISPP*NVNTTD
Trigger: ATCTGTGGTATTAACATTTCATGGGGGTGAGATGTT...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR-3UTR CCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCGTTAATTGGCTATTTTaGACACTCAAATGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSVNWLF*TLKCVR
Trigger: TCTGACACATTTGAGTGTCCAAAATAGCCAATTAAC...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR-3UTR CCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGGTTAATTGGCTATTTTaGACACTCAAATGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLVNWLF*TLKCVR
Trigger: TCTGACACATTTGAGTGTCCAAAATAGCCAATTAAC...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR GCA 72 bp ACGCAGGAGAATGGTGTGAACCCAAGAGGTGGAGCTTaGAGTGAGCCGAGATCGCGCCACTGGCACTCCAGC +
Preference number: 3 (lower is better)
Translates to: TQENGVNPRGGA*SEPRSRHWHSS
Trigger: GCTGGAGTGCCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCACCTCTTGGGTTCACACCATTCTCCTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR TCA 72 bp TACTTTCCCTTCAGATTGTGGAAGGGATTTATACTATaGCTAGTGGCCCTGTGCCACAATCTAGCACCCATG +
Preference number: 3 (lower is better)
Translates to: YFPFRLWKGFIL*LVALCHNLAPM
Trigger: CATGGGTGCTAGATTGTGGCACAGGGCCACTAGTCATAGTATAAATCCCTTCCACAATCTGAAGGGAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR TCA 72 bp CTCACTTATAAGTGGGAGCTAAATGATGAGAGCACATaGACACATAGAGGGAAACAACACACATTGGGGCCT +
Preference number: 3 (lower is better)
Translates to: LTYKWELNDEST*THRGKQHTLGP
Trigger: AGGCCCCAATGTGTGTTGTTTCCCTCTATGTGTTCATGTGCTCTCATCATTTAGCTCCCACTTATAAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR TCA 72 bp TGGCGAAGTTATGGAGCAATTGGAACGCATATACACTaGTACTGGGAGTGTAAATTAGTTCAGCCATGTGAG +
Preference number: 3 (lower is better)
Translates to: WRSYGAIGTHIH*YWECKLVQPCE
Trigger: CTCACATGGCTGAACTAATTTACACTCCCAGTATCAGTGTATATGCGTTCCAATTGCTCCATAACTTCGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR TCA 72 bp ATACACCATGAAGTACTATCCAGCCATATGAAAGAATaGGATCATGTCATTTGCAGGGACATGGATGGAGCT +
Preference number: 3 (lower is better)
Translates to: IHHEVLSSHMKE*DHVICRDMDGA
Trigger: AGCTCCATCCATGTCCCTGCAAATGACATGATCTCATTCTTTCATATGGCTGGATAGTACTTCATGGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR-3UTR CAA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATGAAGATGTGCAATTGTaGAAGTCTTTGTGTAGACTC +
Preference number: 3 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDEDVQL*KSLCRL
Trigger: GAGTCTACACAAAGACTTCAACAATTGCACATCTTC...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR-3UTR CAA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGTTGGCCCAGTTGTATTaGGTTGTGTTAATTGGCTAT +
Preference number: 3 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMLAQLY*VVLIGY
Trigger: ATAGCCAATTAACACAACCAAATACAACTGGGCCAA...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR GCA 72 bp GTGCAATTGTTGAAGTCTTTGTGTAGACTCATGTACTaGAATCTAAGCAGTTTTGGGATTCCCACCTCTTAT +
Preference number: 3 (lower is better)
Translates to: VQLLKSLCRLMY*NLSSFGIPTSY
Trigger: ATAAGAGGTGGGAATCCCAAAACTGCTTAGATTGCAGTACATGAGTCTACACAAAGACTTCAACAATTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR TCA 72 bp ATGTATGTATACACCATGAAGTACTATCCAGCCATATaGAAGAATGAGATCATGTCATTTGCAGGGACATGG +
Preference number: 3 (lower is better)
Translates to: MYVYTMKYYPAI*KNEIMSFAGTW
Trigger: CCATGTCCCTGCAAATGACATGATCTCATTCTTTCATATGGCTGGATAGTACTTCATGGTGTATACATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR-3UTR CAA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTTGGCCCAGTTGTATTaGGTTGTGTTAATTGGCTAT +
Preference number: 3 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLLAQLY*VVLIGY
Trigger: ATAGCCAATTAACACAACCAAATACAACTGGGCCAA...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR-3UTR CAA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGGAAGATGTGCAATTGTaGAAGTCTTTGTGTAGACTC +
Preference number: 3 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLEDVQL*KSLCRL
Trigger: GAGTCTACACAAAGACTTCAACAATTGCACATCTTC...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR GCA 72 bp AGGCAAAGATTTCATGATGAAGACACAAAAGGTGGTTaGAACGAAAGCAAAAATTGGCAAATGGGATCTAAT +
Preference number: 3 (lower is better)
Translates to: RQRFHDEDTKGG*NESKNWQMGSN
Trigger: ATTAGATCCCATTTGCCAATTTTTGCTTTCGTTGCAACCACCTTTTGTGTCTTCATCATGAAATCTTTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATCCAGTCGCCGCGGCCTaGGGGCGCCACAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDPVAAA*GRHKVG
Trigger: CCCAACTTTGTGGCGCCCTCAGGCCGCGGCGACTGG...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATAAAGCTCCAGAGGGCTaGGCACGGCGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDKAPEG*ARRPGP
Trigger: GGGCCCTGGCCGCCGTGCCCAGCCCTCTGGAGCTTT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGCCAGTCGCCGCGGCCTaGGGGCGCCACAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRPVAAA*GRHKVG
Trigger: CCCAACTTTGTGGCGCCCTCAGGCCGCGGCGACTGG...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGCCGGCACATCTGGTCTaGGCACAACCGGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMPAHLV*AQPAPQ
Trigger: CTGCGGCGCCGGTTGTGCGCAGACCAGATGTGCCGG...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTCGCACAGCTGCTCCATaGCATGCAGGCGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVRTAAP*HAGGRC
Trigger: GCACCGGCCGCCTGCATGTCATGGAGCAGCTGTGCG...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCAGTCCCTGTGCACACTaGCGGTCGCCCTGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSSPCAH*RSPWPF
Trigger: GAAGGGCCAGGGCGACCGGCAGTGTGCACAGGGACT...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGCTAGGGAGCCGGGAGTaGGCGGAAGCAGCGCACAAG +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMLGSRE*AEAAHK
Trigger: CTTGTGCGCTGCTTCCGCGCACTCCCGGCTCCCTAG...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCCAGGACAGCGCCTGCTaGGAGAGCACGAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSQDSAC*ESTKRL
Trigger: CAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTG...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGTTGCCAAGGCGCGTGTaGGGGAAGCAGGACAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMLPRRV*GKQDSA
Trigger: GGCGCTGTCCTGCTTCCCGCACACGCGCCTTGGCAA...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGCCACCACGGCCAGCTTaGCAAGGCGCGTGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVPPRPA*QGACAG
Trigger: TCCCGCACACGCGCCTTGGCAAGCTGGCCGTGGTGG...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTCCACCACGGCCAGCTTaGCAAGGCGCGTGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVPPRPA*QGACAG
Trigger: TCCCGCACACGCGCCTTGGCAAGCTGGCCGTGGTGG...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTACACGCCGGAAGCTTTaGTCCCGCGAGGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVTRRKL*SREGGG
Trigger: GCCACCGCCCTCGCGGGACCAAAGCTTCCGGCGTGT...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCGCATGCGCAGAGCCCTaGGCAGCCTCAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSACAEP*AASTPG
Trigger: TCCAGGTGTTGAGGCTGCTCAGGGCTCTGCGCATGC...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGCTAGGGAGCCGGGAGTaGGCGGAAGCAGCGCACAAG +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVLGSRE*AEAAHK
Trigger: CTTGTGCGCTGCTTCCGCGCACTCCCGGCTCCCTAG...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGAAGCAGGACAGCGCCTaGTGCGAGAGCACGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMKQDSA*CESTKR
Trigger: CCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTGCTT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGTTGCCAAGGCGCGTGTaGGGGAAGCAGGACAGCGCC +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRLPRRV*GKQDSA
Trigger: GGCGCTGTCCTGCTTCCCGCACACGCGCCTTGGCAA...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTGGGGTTACCTCTCCTTaGCGCACCCTCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVGVTSP*RTLSTR
Trigger: GCGGGTGGAGAGGGTGCGCCAAGGAGAGGTAACCCC...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAAAGCTCCAGAGGGCTaGGCACGGCGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYKAPEG*ARRPGP
Trigger: GGGCCCTGGCCGCCGTGCCCAGCCCTCTGGAGCTTT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTAGCTCCCGGCACATCTaGTCTGCGCACAACCGGCGC +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVSSRHI*SAHNRR
Trigger: GCGCCGGTTGTGCGCAGACCAGATGTGCCGGGAGCT...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGTGGGGGAGGGTTCTCTaGGTGAGGGGGCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVWGRVL*VRGPHH
Trigger: ATGGTGCGGCCCCCTCACCCAGAGAACCCTCCCCCA...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATAAACTGTGTTCCAGCTaGGCTCTACCCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDKLCSS*ALPSAC
Trigger: GCAGGCGCTGGGTAGAGCTCAGCTGGAACACAGTTT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGCAGGACAGCGCCTGCTaGGAGAGCACGAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLQDSAC*ESTKRL
Trigger: CAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTG...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGAAGCAGGACAGCGCCTaGTGCGAGAGCACGAAGCGG +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRKQDSA*CESTKR
Trigger: CCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTGCTT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTGAGAGCGCGCACAGCTaGTCCATGACATGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVESAHS*SMTCRR
Trigger: CCGCCTGCATGTCATGGAGCAGCTGTGCGCGCTCTC...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGCACTGCCGGTCGCCCTaGCCCTTCCCAAACGTTGTC +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRHCRSP*PFPNVV
Trigger: GACAACGTTTGGGAAGGGCCAGGGCGACCGGCAGTG...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGCACTGCCGGTCGCCCTaGCCCTTCCCAAACGTTGTC +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVHCRSP*PFPNVV
Trigger: GACAACGTTTGGGAAGGGCCAGGGCGACCGGCAGTG...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGGGGGTTACCTCTCCTTaGCGCACCCTCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLGVTSP*RTLSTR
Trigger: GCGGGTGGAGAGGGTGCGCCAAGGAGAGGTAACCCC...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATAGGGCGCCACAAAGTTaGGGACACGCCGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDRAPQS*GHAGSF
Trigger: AAAGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGAGAGAGAGGATCAGGTaGGGTCCAAGCCCGACACAG +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMRERIR*GPSPTQ
Trigger: CTGTGTCGGGCTTGGACCTCACCTGATCCTCTCTCT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATAGCAGGAATCGATGCTaGGCTCATCGATGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDSRNRC*AHRCPS
Trigger: ACTGGGGCATCGATGAGCTCAGCATCGATTCCTGCT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGGCATGCGCAGAGCCCTaGGCAGCCTCAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: HAYQKTGGSTCDISLILRACAEP*AASTPG
Trigger: TCCAGGTGTTGAGGCTGCTCAGGGCTCTGCGCATGC...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGGTCTCCCTTAGGTTCTaGCCTCCTGCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLVSLRF*PPAAPG
Trigger: GCCGGGAGCTGCAGGAGGTCAGAACCTAAGGGAGAC...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAGTCCCTGTGCACACTaGCGGTCGCCCTGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYSPCAH*RSPWPF
Trigger: GAAGGGCCAGGGCGACCGGCAGTGTGCACAGGGACT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCAGTCCAGCAGCGCTCTaGCGCTGGAAGGCATCTCTA +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSSPAAL*RWKASL
Trigger: TAGAGATGCCTTCCAGCGGCAGAGCGCTGCTGGACT...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGCAGTACTGGATCTCCTaGAGGAAGGAGAGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMQYWIS*RKESAH
Trigger: GTGCGCGCTCTCCTTCCTGCAGGAGATCCAGTACTG...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGACGTTCTCCAGCTCCTaGGTGGTCTGGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMTFSSS*VVWLPL
Trigger: AAGTGGGAGCCAGACCACGCAGGAGCTGGAGAACGT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGGGGCCTATCAGAGGGTaGTGGGTAGGAGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVGPIRG*WVGGGR
Trigger: TCTCCCTCCTCCTACCCAGCACCCTCTGATAGGCCC...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTGCAGCGCTCTGCCGCTaGAAGGCATCTCTAACCCAG +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVAALCR*KASLTQ
Trigger: CTGGGTTAGAGATGCCTTCCAGCGGCAGAGCGCTGC...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGGCAGCGCTCTGCCGCTaGAAGGCATCTCTAACCCAG +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRAALCR*KASLTQ
Trigger: CTGGGTTAGAGATGCCTTCCAGCGGCAGAGCGCTGC...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCCGTTGTCCACGGGGTTaGCATCGTCGCAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSRCPRG*HRRKAP
Trigger: TGGAGCTTTGCGACGATGCCAACCCCGTGGACAACG...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGTCTCCAGCTCCTGCGTaGTCTGGCTCCCACTTAGGC +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVSPAPA*SGSHLG
Trigger: GCCTAAGTGGGAGCCAGACCACGCAGGAGCTGGAGA...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCAGCAGCCTCAACACCTaGACAATGCGCCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSSSLNT*TMRPTF
Trigger: GAACGTGGGGCGCATTGTCCAGGTGTTGAGGCTGCT...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGTCGCTACTTGGTGGGTaGAGGGGTTGGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVSLLGG*RGWGRE
Trigger: CTCCCTTCCCCAACCCCTCCACCCACCAAGTAGCGA...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGACTGGCACTCCAGCCTaGGCGACAGACGGACACTCC +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLTGTPA*ATDGHS
Trigger: GGAGTGTCCGTCTGTCGCCCAGGCTGGAGTGCCAGT...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGAGAGAGAGGATCAGGTaGGGTCCAAGCCCGACACAG +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRRERIR*GPSPTQ
Trigger: CTGTGTCGGGCTTGGACCTCACCTGATCCTCTCTCT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGAGCAGGAATCGATGCTaGGCTCATCGATGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMSRNRC*AHRCPS
Trigger: ACTGGGGCATCGATGAGCTCAGCATCGATTCCTGCT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCTACACGTGAGGTCTaGCTCGACCGGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLSTREV*LDRSRR
Trigger: CCTCCTGGACCGGTCGAGTCAGACCTCACGTGTAGA...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGCTCTTAGTCTACACGTaGGGTCTGACTCGACCGGTC +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMLLVYT*GLTRPV
Trigger: GACCGGTCGAGTCAGACCTCACGTGTAGACTAAGAG...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGCATGCAGGCGGCCGGTaGGGTAGTAGTGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: HAYQKTGGSTCDISLILRHAGGR*GSSAGH
Trigger: ATGTCCTGCACTACTACCGCACCGGCCGCCTGCATG...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATGAGAGCGCGCACAGCTaGTCCATGACATGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYESAHS*SMTCRR
Trigger: CCGCCTGCATGTCATGGAGCAGCTGTGCGCGCTCTC...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGACGTTCTCCAGCTCCTaGGTGGTCTGGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVTFSSS*VVWLPL
Trigger: AAGTGGGAGCCAGACCACGCAGGAGCTGGAGAACGT...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGAGGGCGCCACAAAGTTaGGGACACGCCGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRRAPQS*GHAGSF
Trigger: AAAGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGTCTCCAGCTCCTGCGTaGTCTGGCTCCCACTTAGGC +
Preference number: 4 (lower is better)
Translates to: HAYQKTGGSTCDISLILRSPAPA*SGSHLG
Trigger: GCCTAAGTGGGAGCCAGACCACGCAGGAGCTGGAGA...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCCTTCGTAACACTGGGTaGTTGTCATCCCAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSLRNTG*LSSQGS
Trigger: GCTCCCTTGGGATGACAATCACCCAGTGTTACGAAG...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGCGCAGGAGAATGGTGTaGACCCAAGAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRRRRMV*TQEVEL
Trigger: AAGCTCCACCTCTTGGGTTCACACCATTCTCCTGCG...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATCATGCAGGCGGCCGGTaGGGTAGTAGTGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYHAGGR*GSSAGH
Trigger: ATGTCCTGCACTACTACCGCACCGGCCGCCTGCATG...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGAGGATTTCCAGCAGCTaGAGGTCCAGCCAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMRISSS*RSSQLN
Trigger: GTTAAGCTGGCTGGACCTGCAGCTGCTGGAAATCCT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTTCCCAACTTCGCAATTaGGATTCCCAGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVSQLRN*DSQPRR
Trigger: CCTCCTGGGCTGGGAATCGCAATTGCGAAGTTGGGA...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGCGTTGTCCACGGGGTTaGCATCGTCGCAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLRCPRG*HRRKAP
Trigger: TGGAGCTTTGCGACGATGCCAACCCCGTGGACAACG...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTGCTTCTGGCGAACAGTaGGACAAGGTCCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVASGEQ*DKVLGR
Trigger: TCTCCCAAGGACCTTGTCCCACTGTTCGCCAGAAGC...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGGCTTCTGGCGAACAGTaGGACAAGGTCCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVASGEQ*DKVLGR
Trigger: TCTCCCAAGGACCTTGTCCCACTGTTCGCCAGAAGC...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATAGATACGGGCAGCTGTaGAAGATCCAGGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDRYGQL*KIQVSP
Trigger: TGGAGAAACCTGGATCTTCCACAGCTGCCCGTATCT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCGCCTGTGGTGGTGTCTaGTCTAATGTCCCCATATCC +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSACGGV*SNVPIS
Trigger: GGATATGGGGACATTAGACCAGACACCACCACAGGC...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAGCAAGCAAGGGGGATaGCGAGACTCACTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYSKQGG*RDSLLP
Trigger: GGGCAGGAGTGAGTCTCGCCATCCCCCTTGCTTGCT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTCTTCGTAACACTGGGTaGTTGTCATCCCAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVLRNTG*LSSQGS
Trigger: GCTCCCTTGGGATGACAATCACCCAGTGTTACGAAG...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCCACAAGGGACACTTGTaGAGGTTGTGTCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSHKGHL*RLCQEC
Trigger: GCATTCCTGACACAACCTTCACAAGTGTCCCTTGTG...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTGTCGCAGCATCTCCATaGTACTCCGGGCATAGACAT +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVVAASP*YSGHRH
Trigger: ATGTCTATGCCCGGAGTATCATGGAGATGCTGCGAC...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGACATATCGGAACGCCTaGGAGCTGCGGTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLTYRNA*ELRSKK
Trigger: CTTCTTCGACCGCAGCTCGCAGGCGTTCCGATATGT...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATCAGTACTGGATCTCCTaGAGGAAGGAGAGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYQYWIS*RKESAH
Trigger: GTGCGCGCTCTCCTTCCTGCAGGAGATCCAGTACTG...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGAGGATTTCCAGCAGCTaGAGGTCCAGCCAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVRISSS*RSSQLN
Trigger: GTTAAGCTGGCTGGACCTGCAGCTGCTGGAAATCCT...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGATCCTGTGGAATGTCTaGCCAGCTTTAGCATGCGCA +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMILWNV*PALACA
Trigger: TGCGCATGCTAAAGCTGGGCAGACATTCCACAGGAT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCATCCTGTGGAATGTCTaGCCAGCTTTAGCATGCGCA +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSILWNV*PALACA
Trigger: TGCGCATGCTAAAGCTGGGCAGACATTCCACAGGAT...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATGGCGAGACTCACTCCTaGCCGCAGGAGACCAAAACA +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYGETHS*PQETKT
Trigger: TGTTTTGGTCTCCTGCGGGCAGGAGTGAGTCTCGCC...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAGCAGCCTCAACACCTaGACAATGCGCCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYSSLNT*TMRPTF
Trigger: GAACGTGGGGCGCATTGTCCAGGTGTTGAGGCTGCT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCGGGAGCGTAATCCTGTaGAATGTCTGCCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSGSVIL*NVCPAL
Trigger: TAAAGCTGGGCAGACATTCCACAGGATTACGCTCCC...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR CAA 72 bp ATGCAGAGCTTGTGTAGGAAGAATGAAATCTGCAATTaGACTTTTAGGAGTGTCGTTTTCCGGGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MQSLCRKNEICN*TFRSVVFRVRQ
Trigger: CTGCCTGACCCGGAAAACGACACTCCTAAAAGTCAAATTGCAGATTTCATTCTTCCTACACAAGCTCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR CAA 72 bp ACTATCCAGCCATATGAAAGAATGAGATCATGTCATTaGCAGGGACATGGATGGAGCTGGAGGCTATTATCC +
Preference number: 4 (lower is better)
Translates to: TIQPYERMRSCH*QGHGWSWRLLS
Trigger: GGATAATAGCCTCCAGCTCCATCCATGTCCCTGCAAATGACATGATCTCATTCTTTCATATGGCTGGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTTCAGCTCTTTCCTTCTaGAGTATCTGTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVSALSF*SICPCS
Trigger: GCTGCAGGGACAGATACTTCAGAAGGAAAGAGCTGA...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGGTCGCAGCATCTCCATaGTACTCCGGGCATAGACAT +
Preference number: 4 (lower is better)
Translates to: HAYQKTGGSTCDISLILRVAASP*YSGHRH
Trigger: ATGTCTATGCCCGGAGTATCATGGAGATGCTGCGAC...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTGGTGTACAGATTGAATaGCTCGCTACTTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVGVQIE*LATWWV
Trigger: CACCCACCAAGTAGCGAGTCATTCAATCTGTACACC...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGAAGGGATTTATACTATaGCTAGTGGCCCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMKGFIL*LVALCH
Trigger: GTGGCACAGGGCCACTAGTCATAGTATAAATCCCTT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATACATATCGGAACGCCTaGGAGCTGCGGTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYTYRNA*ELRSKK
Trigger: CTTCTTCGACCGCAGCTCGCAGGCGTTCCGATATGT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATTACTTGCTCTTTCTCTaGCTTTCAGTCGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDYLLFL*LSVAAS
Trigger: AGATGCTGCGACTGAAAGGCAGAGAAAGAGCAAGTA...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGATATTCCAGAGCTTCTaGCGAACAGTGGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMIFQSF*RTVGQG
Trigger: ACCTTGTCCCACTGTTCGCCAGAAGCTCTGGAATAT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGAGATACGGGCAGCTGTaGAAGATCCAGGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRRYGQL*KIQVSP
Trigger: TGGAGAAACCTGGATCTTCCACAGCTGCCCGTATCT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGGGGAGCGTAATCCTGTaGAATGTCTGCCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRGSVIL*NVCPAL
Trigger: TAAAGCTGGGCAGACATTCCACAGGATTACGCTCCC...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCTCATTTGCAGGGACATaGATGGAGCTGGAGGCTATT +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSSFAGT*MELEAI
Trigger: AATAGCCTCCAGCTCCATCCATGTCCCTGCAAATGA...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCCCGATAATATACACATaGAGGCCACGATTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSPIIYT*RPRFCL
Trigger: CAGGCAAAATCGTGGCCTTCATGTGTATATTATCGG...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGGAAGAGGAGAGAAGATaGCTCTTAGCTGAACGCAAG +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYREEERR*LLAERK
Trigger: CTTGCGTTCAGCTAAGAGTCATCTTCTCTCCTCTTC...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCACGCTGTCTAACAGCTaGTTCCTTGAGTTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSTLSNS*FLEFQG
Trigger: ACCTTGAAACTCAAGGAAGCAGCTGTTAGACAGCGT...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTGCTGCTCCTAGTACTTaGTCTTTCTCTGCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVAAPST*SFSAFQ
Trigger: CTGAAAGGCAGAGAAAGAGCAAGTACTAGGAGCAGC...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGGCTGCTCCTAGTACTTaGTCTTTCTCTGCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRAAPST*SFSAFQ
Trigger: CTGAAAGGCAGAGAAAGAGCAAGTACTAGGAGCAGC...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGATATTCCAGAGCTTCTaGCGAACAGTGGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRIFQSF*RTVGQG
Trigger: ACCTTGTCCCACTGTTCGCCAGAAGCTCTGGAATAT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATTCAGCTCTTTCCTTCTaGAGTATCTGTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYSALSF*SICPCS
Trigger: GCTGCAGGGACAGATACTTCAGAAGGAAAGAGCTGA...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGTGTTCACTCTCATGTTaGCTTTCCTGGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRCSLSC*LSWSSV
Trigger: CACAGAAGACCAGGAAAGTCAACATGAGAGTGAACA...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATCACAAGGGACACTTGTaGAGGTTGTGTCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYHKGHL*RLCQEC
Trigger: GCATTCCTGACACAACCTTCACAAGTGTCCCTTGTG...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGAGGAGGTGTACAGATTaGATGACTCGCTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: HAYQKTGGSTCDISLILRRRCTD*MTRYLV
Trigger: CACCAAGTAGCGAGTCATTCAATCTGTACACCTCCT...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATAGCCATATGAAAGAATaGGATCATGTCATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDSHMKE*DHVICR
Trigger: CCTGCAAATGACATGATCTCATTCTTTCATATGGCT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGAGCCATGTGAGAGTGTaGCAATTCCTCAAAGACCTA +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVSHVRV*QFLKDL
Trigger: TAGGTCTTTGAGGAATTGCCACACTCTCACATGGCT...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGCCGATAATATACACATaGAGGCCACGATTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLPIIYT*RPRFCL
Trigger: CAGGCAAAATCGTGGCCTTCATGTGTATATTATCGG...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGAATGCCTGCAAAGTTTaGACATTTGCTATTTACCCC +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMNACKV*TFAIYP
Trigger: GGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGATTAGTTCAGCCATGTaGGAGTGTGGCAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLISSAM*ECGNSS
Trigger: TGAGGAATTGCCACACTCTCACATGGCTGAACTAAT...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCGTGTCAGGAATGCTTTaGTCAGCAAAGTATTCTACA +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSVSGML*SAKYST
Trigger: TGTAGAATACTTTGCTGAGCAAAGCATTCCTGACAC...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGACGCTGTCTAACAGCTaGTTCCTTGAGTTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: HAYQKTGGSTCDISLILRTLSNS*FLEFQG
Trigger: ACCTTGAAACTCAAGGAAGCAGCTGTTAGACAGCGT...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTACTTGCTCTTTCTCTaGCTTTCAGTCGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLYLLFL*LSVAAS
Trigger: AGATGCTGCGACTGAAAGGCAGAGAAAGAGCAAGTA...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCTGGAATAAACCTAAATaGCCATCAACTGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSWNKPK*PSTVDW
Trigger: CCAGTCTACAGTTGATGGGCATTTAGGTTTATTCCA...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATTCTGCCCATCAAATATaGGTTTTCTCTTGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDSAHQI*VFSCKA
Trigger: AGCTTTACAAGAGAAAACCCATATTTGATGGGCAGA...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATTGTTCACTCTCATGTTaGCTTTCCTGGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYCSLSC*LSWSSV
Trigger: CACAGAAGACCAGGAAAGTCAACATGAGAGTGAACA...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGAGATCAGTTCATTTGTaGCCAGTGGTTTACATGAAA +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMRSVHL*PVVYMK
Trigger: TTTCATGTAAACCACTGGTCACAAATGAACTGATCT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTACTCAGTTGGGAGAATaGAGATGTGCAATTGTTGAA +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVTQLGE*RCAIVE
Trigger: TTCAACAATTGCACATCTTCATTCTCCCAACTGAGT...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGACTCAGTTGGGAGAATaGAGATGTGCAATTGTTGAA +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRTQLGE*RCAIVE
Trigger: TTCAACAATTGCACATCTTCATTCTCCCAACTGAGT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATGGGTCCCTTCCAACTTaGGAATTTATATTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYGSLPT*EFIFLP
Trigger: AGGGAGGAATATAAATTCTCAAGTTGGAAGGGACCC...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGAACTCATGCCATCAGTaGAAATGTTTTCAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMNSCHQ*KCFQSL
Trigger: TAAGCTCTGAAAACATTTTCACTGATGGCATGAGTT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGAACCTATCAACAGAGTaGACAGACAACCTACAGATT +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRNLSTE*TDNLQI
Trigger: AATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGGACACAAAAGGTGGTTaGAACGAAAGCAAAAATTGG +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVDTKGG*NESKNW
Trigger: CCAATTTTTGCTTTCGTTGCAACCACCTTTTGTGTC...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGGTTCTCACTTATAAGTaGGAGCTAAATGATGAGAGC +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVVLTYK*ELNDES
Trigger: GCTCTCATCATTTAGCTCCCACTTATAAGTGAGAAC...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGACAGTAGCAAAGACATaGAATAAACCTAAATGCCCA +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMTVAKT*NKPKCP
Trigger: TGGGCATTTAGGTTTATTCCATGTCTTTGCTACTGT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR CAA 72 bp AACAGAATATTAACTACAAGAAAACAGGACCTAGTCTaGTTTAAGAAAGACTCCCTAGTCCCCAGAACACCA +
Preference number: 4 (lower is better)
Translates to: NRILTTRKQDLV*FKKDSLVPRTP
Trigger: TGGTGTTCTGGGGACTAGGGAGTCTTTCTTAAACAAGACTAGGTCCTGTTTTCTTGTAGTTAATATTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGAACATCTCACCCCCATaGAATGTTAATACCACAGAT +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLNISPP*NVNTTD
Trigger: ATCTGTGGTATTAACATTTCATGGGGGTGAGATGTT...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGTTACTTAAGGCATATTaGACTTCTCCATGCACAAGA +
Preference number: 4 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRLLKAY*TSPCTR
Trigger: TCTTGTGCATGGAGAAGTTCAATATGCCTTAAGTAA...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGGTGTCAGGAATGCTTTaGTCAGCAAAGTATTCTACA +
Preference number: 4 (lower is better)
Translates to: HAYQKTGGSTCDISLILRVSGML*SAKYST
Trigger: TGTAGAATACTTTGCTGAGCAAAGCATTCCTGACAC...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGAGGTTGTGTCAGGAATaGTTTGCTCAGCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLRLCQE*FAQQSI
Trigger: AATACTTTGCTGAGCAAAGCATTCCTGACACAACCT...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGTCTTTCTCTGGGCTATaGAGTTTACCTTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVSFSGL*SLPSIF
Trigger: AAAAATGGAAGGTAAACTGCATAGCCCAGAGAAAGA...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTTCTTTCTCTGGGCTATaGAGTTTACCTTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVSFSGL*SLPSIF
Trigger: AAAAATGGAAGGTAAACTGCATAGCCCAGAGAAAGA...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTGTAGACTCATGTACTaGAATCTAAGCAGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLCRLMY*NLSSFG
Trigger: CCCAAAACTGCTTAGATTGCAGTACATGAGTCTACA...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGCACACGTATGTTCAATaGAGCATTATTCACAGTAGC +
Preference number: 4 (lower is better)
Translates to: HAYQKTGGSTCDISLILRHTYVQ*SIIHSS
Trigger: GCTACTGTGAATAATGCTGCATTGAACATACGTGTG...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGCATCTTACAATTGACTaGCATCTTTCTTTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMHLTID*HLSFLV
Trigger: TACCAAGAAAGAAAGATGCCAGTCAATTGTAAGATG...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATATGCTGGCGAAGTTATaGAGCAATTGGAACGCATAT +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYMLAKL*SNWNAY
Trigger: ATATGCGTTCCAATTGCTCCATAACTTCGCCAGCAT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
3UTR CAA 72 bp AGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTaGTGTAGACTCATGTACTGCAATCTAAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: SWENEDVQLLKS*CRLMYCNLSSF
Trigger: AAAACTGCTTAGATTGCAGTACATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGAAGATGTGCAATTGTTaGAGTCTTTGTGTAGACTCA +
Preference number: 4 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLKMCNC*SLCVDS
Trigger: TGAGTCTACACAAAGACTTCAACAATTGCACATCTT...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAATGCCTGCAAAGTTTaGACATTTGCTATTTACCCC +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYNACKV*TFAIYP
Trigger: GGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAATGATGAGAGCACATaGACACATAGAGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYNDEST*THRGKQ
Trigger: TTGTTTCCCTCTATGTGTTCATGTGCTCTCATCATT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR TCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAGTGGGCAAAGGATATaGACAGACACTTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYSGQRI*TDTFQK
Trigger: CTTTTGAAAAGTGTCTGTTCATATCCTTTGCCCACT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR GCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATTGTAGACTCATGTACTaGAATCTAAGCAGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYCRLMY*NLSSFG
Trigger: CCCAAAACTGCTTAGATTGCAGTACATGAGTCTACA...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGAAATATGCTGTTTTATaGTCCACATACTACACTCAG +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVKYAVL*STYYTQ
Trigger: CTGAGTGTAGTATGTGGAGCATAAAACAGCATATTT...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CCA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGGTTAATTGGCTATTTTaGACACTCAAATGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVVNWLF*TLKCVR
Trigger: TCTGACACATTTGAGTGTCCAAAATAGCCAATTAAC...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR TCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAAGATGTGCAATTGTTaGAGTCTTTGTGTAGACTCA +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYKMCNC*SLCVDS
Trigger: TGAGTCTACACAAAGACTTCAACAATTGCACATCTT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
3UTR CAA 72 bp ATGATGAATGTCAAAATGCCTGCAAAGTTTGAACATTaGCTATTTACCCCAACAATCAGAAAGCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: MMNVKMPAKFEH*LFTPTIRKLSI
Trigger: TATGGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTTGACATTCATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR GCA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAAATATGCTGTTTTATaGTCCACATACTACACTCAG +
Preference number: 4 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYKYAVL*STYYTQ
Trigger: CTGAGTGTAGTATGTGGAGCATAAAACAGCATATTT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 90 bp CCGCGGCCTGAGGGCGCCACAAAGTTGGGGACACGCCGGAAGCTTTaGTCCCGCGAGGGCGGTGGCACGGCCCCTGGTGGCGGCCGGGAT +
Preference number: 5 (lower is better)
Translates to: PRPEGATKLGTRRKL*SREGGGTAPGGGRD
Trigger: ATCCCGGCCGCCACCAGGGGCCGTGCCACCGCCCTCGCGGGACCAAAGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCTCAGGCCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 90 bp GGGAGGTCAGGGAGCCGCTGTCCAGCGGCGAGTCCAGCAGCGCTCTaGCGCTGGAAGGCATCTCTAACCCAGTCGCCGCGGCCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GRSGSRCPAASPAAL*RWKASLTQSPRPEG
Trigger: GCCCTCAGGCCGCGGCGACTGGGTTAGAGATGCCTTCCAGCGGCAGAGCGCTGCTGGACTCGCCGCTGGACAGCGGCTCCCTGACCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 90 bp TCAGGGAGCCGCTGTCCAGCGGCGAGTCCAGCAGCGCTCTGCCGCTaGAAGGCATCTCTAACCCAGTCGCCGCGGCCTGAGGGCGCCACA +
Preference number: 5 (lower is better)
Translates to: SGSRCPAASPAALCR*KASLTQSPRPEGAT
Trigger: TGTGGCGCCCTCAGGCCGCGGCGACTGGGTTAGAGATGCCTTCCAGCGGCAGAGCGCTGCTGGACTCGCCGCTGGACAGCGGCTCCCTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 90 bp GCCAGCTTGCCAAGGCGCGTGTGCGGGAAGCAGGACAGCGCCTGCTaGGAGAGCACGAAGCGGCTGCCGCCCACGTTGACCGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ASLPRRVCGKQDSAC*ESTKRLPPTLTVKQ
Trigger: CTGCTTCACGGTCAACGTGGGCGGCAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTGCTTCCCGCACACGCGCCTTGGCAAGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 90 bp ACGGCCAGCTTGCCAAGGCGCGTGTGCGGGAAGCAGGACAGCGCCTaGTGCGAGAGCACGAAGCGGCTGCCGCCCACGTTGACCGTGAAG +
Preference number: 5 (lower is better)
Translates to: TASLPRRVCGKQDSA*CESTKRLPPTLTVK
Trigger: CTTCACGGTCAACGTGGGCGGCAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTGCTTCCCGCACACGCGCCTTGGCAAGCTGGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 90 bp CACCCGCTGTGCGCCTTCCTCCTCCTGCCGCTAGGGAGCCGGGAGTaGGCGGAAGCAGCGCACAAGTGGCAGAAAGAGGAGACAGGGAGC +
Preference number: 5 (lower is better)
Translates to: HPLCAFLLLPLGSRE*AEAAHKWQKEETGS
Trigger: GCTCCCTGTCTCCTCTTTCTGCCACTTGTGCGCTGCTTCCGCGCACTCCCGGCTCCCTAGCGGCAGGAGGAGGAAGGCGCACAGCGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS TCA 90 bp AGCGCTCTGCCGCTGGAAGGCATCTCTAACCCAGTCGCCGCGGCCTaGGGGCGCCACAAAGTTGGGGACACGCCGGAAGCTTTGGTCCCG +
Preference number: 5 (lower is better)
Translates to: SALPLEGISNPVAAA*GRHKVGDTPEALVP
Trigger: CGGGACCAAAGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCTCAGGCCGCGGCGACTGGGTTAGAGATGCCTTCCAGCGGCAGAGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 90 bp CTGCCCAGCTTTAGCATGCGCAGAGCCCTGAGCAGCCTCAACACCTaGACAATGCGCCCCACGTTCTCCAGCTCCTGCGTGGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LPSFSMRRALSSLNT*TMRPTFSSSCVVWL
Trigger: GAGCCAGACCACGCAGGAGCTGGAGAACGTGGGGCGCATTGTCCAGGTGTTGAGGCTGCTCAGGGCTCTGCGCATGCTAAAGCTGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 90 bp GAGGTGTACAGATTGAATGACTCGCTACTTGGTGGGTGGAGGGGTTaGGGAAGGGAGGAAGGAGGGAGATGTGGGGCGGAGGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: EVYRLNDSLLGGWRG*GREEGGRCGAEEEE
Trigger: TTCCTCCTCCTCCGCCCCACATCTCCCTCCTTCCTCCCTTCCCCAACCCCTCCACCCACCAAGTAGCGAGTCATTCAATCTGTACACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS TCA 90 bp GTAATCCTGTGGAATGTCTGCCCAGCTTTAGCATGCGCAGAGCCCTaGGCAGCCTCAACACCTGGACAATGCGCCCCACGTTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: VILWNVCPALACAEP*AASTPGQCAPRSPA
Trigger: AGCTGGAGAACGTGGGGCGCATTGTCCAGGTGTTGAGGCTGCTCAGGGCTCTGCGCATGCTAAAGCTGGGCAGACATTCCACAGGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 90 bp TCTCCCTTAGGTTCTGACCTCCTGCAGCTCCCGGCACATCTGGTCTaGGCACAACCGGCGCCGCAGGTAACGTACTCTTCTTTTGATCCT +
Preference number: 5 (lower is better)
Translates to: SPLGSDLLQLPAHLV*AQPAPQVTYSSFDP
Trigger: AGGATCAAAAGAAGAGTACGTTACCTGCGGCGCCGGTTGTGCGCAGACCAGATGTGCCGGGAGCTGCAGGAGGTCAGAACCTAAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS GCA 90 bp CCGGTGAACCAGCTAATGCACACATACTCCAGGATTTCCAGCAGCTaGAGGTCCAGCCAGCTTAACTCAGCTGACATCAGGGCCATGTTA +
Preference number: 5 (lower is better)
Translates to: PVNQLMHTYSRISSS*RSSQLNSADIRAML
Trigger: TAACATGGCCCTGATGTCAGCTGAGTTAAGCTGGCTGGACCTGCAGCTGCTGGAAATCCTGGAGTATGTGTGCATTAGCTGGTTCACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 90 bp GCAGCTGTGGAAGATCCAGGTTTCTCCAGGATATTCCAGAGCTTCTaGCGAACAGTGGGACAAGGTCCTTGGGAGAAGTCCTGTTCACTC +
Preference number: 5 (lower is better)
Translates to: AAVEDPGFSRIFQSF*RTVGQGPWEKSCSL
Trigger: GAGTGAACAGGACTTCTCCCAAGGACCTTGTCCCACTGTTCGCCAGAAGCTCTGGAATATCCTGGAGAAACCTGGATCTTCCACAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGGACACGCCGGAAGCTTaGGTCCCGCGAGGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMDTPEA*VPRGRW
Trigger: CCACCGCCCTCGCGGGACCAAAGCTTCCGGCGTGTC...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTGACACGCCGGAAGCTTaGGTCCCGCGAGGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVDTPEA*VPRGRW
Trigger: CCACCGCCCTCGCGGGACCAAAGCTTCCGGCGTGTC...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGACCACCACGGCCAGCTaGCCAAGGCGCGTGTGCGGG +
Preference number: 5 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRTTTAS*PRRVCG
Trigger: CCCGCACACGCGCCTTGGCAAGCTGGCCGTGGTGGT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS TCA 90 bp CGGATAGAAATAGGAGCAGTAGGCCGACTTCTTCGTAACACTGGGTaGTTGTCATCCCAAGGGAGCGTAATCCTGTGGAATGTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: RIEIGAVGRLLRNTG*LSSQGSVILWNVCP
Trigger: TGGGCAGACATTCCACAGGATTACGCTCCCTTGGGATGACAATCACCCAGTGTTACGAAGAAGTCGGCCTACTGCTCCTATTTCTATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGCGGCTGCCGCCCACGTaGACCGTGAAGCAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: HAYQKTGGSTCDISLILRRLPPT*TVKQSP
Trigger: CGGGGACTGCTTCACGGTCAACGTGGGCGGCAGCCG...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGACCACCACGGCCAGCTaGCCAAGGCGCGTGTGCGGG +
Preference number: 5 (lower is better)
Translates to: HAYQKTGGSTCDISLILRTTTAS*PRRVCG
Trigger: CCCGCACACGCGCCTTGGCAAGCTGGCCGTGGTGGT...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATGGCCCTTCCCAAACGTaGTCACCCCGCCTCCCAACT +
Preference number: 5 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDGPSQT*SPRLPT
Trigger: AGTTGGGAGGCGGGGTGACAACGTTTGGGAAGGGCC...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS CCA 90 bp AAGATCCAGGTTTCTCCAGGATATTCCAGAGCTTCTGGCGAACAGTaGGACAAGGTCCTTGGGAGAAGTCCTGTTCACTCTCATGTTGAC +
Preference number: 5 (lower is better)
Translates to: KIQVSPGYSRASGEQ*DKVLGRSPVHSHVD
Trigger: GTCAACATGAGAGTGAACAGGACTTCTCCCAAGGACCTTGTCCCACTGTTCGCCAGAAGCTCTGGAATATCCTGGAGAAACCTGGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGAGGGGTTACCTCTCCTaGGCGCACCCTCTCCACCCG +
Preference number: 5 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRRGYLS*AHPLHP
Trigger: CGGGTGGAGAGGGTGCGCCAAGGAGAGGTAACCCCT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCGAGGGCGCCACAAAGTaGGGGACACGCCGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSEGATK*GTRRKL
Trigger: AAGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCTC...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATCGGCTGCCGCCCACGTaGACCGTGAAGCAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYRLPPT*TVKQSP
Trigger: CGGGGACTGCTTCACGGTCAACGTGGGCGGCAGCCG...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAGGGGTTACCTCTCCTaGGCGCACCCTCTCCACCCG +
Preference number: 5 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYRGYLS*AHPLHP
Trigger: CGGGTGGAGAGGGTGCGCCAAGGAGAGGTAACCCCT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGTCGTTGTCCACGGGGTaGGCATCGTCGCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRSLSTG*ASSQSS
Trigger: GGAGCTTTGCGACGATGCCAACCCCGTGGACAACGA...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGCTCCCAACTTCGCAATaGCGATTCCCAGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMLPTSQ*RFPAQE
Trigger: CTCCTGGGCTGGGAATCGCAATTGCGAAGTTGGGAG...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp AAAATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCGTTGTCCACGGGGTaGGCATCGTCGCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: KMPAKFEHLLFTPTIRKLSLSTG*ASSQSS
Trigger: GGAGCTTTGCGACGATGCCAACCCCGTGGACAACGA...CAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATAGTGGGACAAGGTCCTaGGGAGAAGTCCTGTTCACT +
Preference number: 5 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDSGTRS*GEVLFT
Trigger: AGTGAACAGGACTTCTCCCAAGGACCTTGTCCCACT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATATGAAGGCCACGATTTaGCCTGTGGTGGTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDMKATI*PVVVSG
Trigger: ACCAGACACCACCACAGGCAAAATCGTGGCCTTCAT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS TCA 90 bp ACAGTGGGACAAGGTCCTTGGGAGAAGTCCTGTTCACTCTCATGTTaGCTTTCCTGGTCTTCTGTGTCCTTCTTGAAGTCTAAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: TVGQGPWEKSCSLSC*LSWSSVSFLKSKVS
Trigger: TGAAACTTTAGACTTCAAGAAGGACACAGAAGACCAGGAAAGTCAACATGAGAGTGAACAGGACTTCTCCCAAGGACCTTGTCCCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGTCGAAGAAGTACTCGTaGTCCACGGGGTTGGCATCG +
Preference number: 5 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRSKKYS*STGLAS
Trigger: CGATGCCAACCCCGTGGACAACGAGTACTTCTTCGA...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp CATGCATACCAGAAAACAGGAGGTAGTACATGCGATATTTCATTGATTTTAAGGTCGAAGAAGTACTCGTaGTCCACGGGGTTGGCATCG +
Preference number: 5 (lower is better)
Translates to: HAYQKTGGSTCDISLILRSKKYS*STGLAS
Trigger: CGATGCCAACCCCGTGGACAACGAGTACTTCTTCGA...CCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGATGAAGGCCACGATTTaGCCTGTGGTGGTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVMKATI*PVVVSG
Trigger: ACCAGACACCACCACAGGCAAAATCGTGGCCTTCAT...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 90 bp CACCATGCACAAGGGACACTTGTGAAGGTTGTGTCAGGAATGCTTTaGTCAGCAAAGTATTCTACAGTTGAAAATATAGAGATTCCCACG +
Preference number: 5 (lower is better)
Translates to: HHAQGTLVKVVSGML*SAKYSTVENIEIPT
Trigger: CGTGGGAATCTCTATATTTTCAACTGTAGAATACTTTGCTGAGCAAAGCATTCCTGACACAACCTTCACAAGTGTCCCTTGTGCATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGATGAGATCATGTCATTaGCAGGGACATGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMMRSCH*QGHGWS
Trigger: GCTCCATCCATGTCCCTGCAAATGACATGATCTCAT...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATAGTGGGACAAGGTCCTaGGGAGAAGTCCTGTTCACT +
Preference number: 5 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYSGTRS*GEVLFT
Trigger: AGTGAACAGGACTTCTCCCAAGGACCTTGTCCCACT...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTCGGGTCCCTTCCAACTaGAGAATTTATATTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVRVPSN*RIYIPP
Trigger: GGGAGGAATATAAATTCTCAAGTTGGAAGGGACCCG...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGCAGGAGGTGTACAGATaGAATGACTCGCTACTTGGT +
Preference number: 5 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVQEVYR*NDSLLG
Trigger: ACCAAGTAGCGAGTCATTCAATCTGTACACCTCCTG...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTCTGTTCACTCTCATGTaGACTTTCCTGGTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVLFTLM*TFLVFC
Trigger: ACAGAAGACCAGGAAAGTCAACATGAGAGTGAACAG...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGTGTGTCAGGAATGCTTaGCTCAGCAAAGTATTCTAC +
Preference number: 5 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMCVRNA*LSKVFY
Trigger: GTAGAATACTTTGCTGAGCAAAGCATTCCTGACACA...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCTGTGTCAGGAATGCTTaGCTCAGCAAAGTATTCTAC +
Preference number: 5 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSCVRNA*LSKVFY
Trigger: GTAGAATACTTTGCTGAGCAAAGCATTCCTGACACA...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATCAGACAACCTACAGATaGGGGGAAAATATTTGCAAA +
Preference number: 5 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDQTTYR*GENICK
Trigger: TTTGCAAATATTTTCCCCCAATCTGTAGGTTGTCTG...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATAGACACAAAAGGTGGTaGCAACGAAAGCAAAAATTG +
Preference number: 5 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDRHKRW*QRKQKL
Trigger: CAATTTTTGCTTTCGTTGCAACCACCTTTTGTGTCT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCTCTTCTGTGTCCTTCTaGAAGTCTAAAGTTTCACTC +
Preference number: 5 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSSSVSF*KSKVSL
Trigger: GAGTGAAACTTTAGACTTCAAGAAGGACACAGAAGA...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCTTGGCCCAGTTGTATTaGGTTGTGTTAATTGGCTAT +
Preference number: 5 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSLAQLY*VVLIGY
Trigger: ATAGCCAATTAACACAACCAAATACAACTGGGCCAA...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCCAATTGTTGAAGTCTTaGTGTAGACTCATGTACTGC +
Preference number: 5 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSQLLKS*CRLMYC
Trigger: GCAGTACATGAGTCTACACAAAGACTTCAACAATTG...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp CTCAGTTGGGAGAATGAAGATGTGCAATTGTTGAAGTCTTTGTGTAGACTCATGCAATTGTTGAAGTCTTaGTGTAGACTCATGTACTGC +
Preference number: 5 (lower is better)
Translates to: LSWENEDVQLLKSLCRLMQLLKS*CRLMYC
Trigger: GCAGTACATGAGTCTACACAAAGACTTCAACAATTG...CATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATAAATGCCTGCAAAGTTaGAACATTTGCTATTTACCC +
Preference number: 5 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDKCLQS*NICYLP
Trigger: GGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTT...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATTGGCATCTTTCTTTCTaGGTAGTGCATAGCATAATA +
Preference number: 5 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDWHLSF*VVHSII
Trigger: TATTATGCTATGCACTACCAAGAAAGAAAGATGCCA...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp AGCTTTGTCAGAGCAAAGGAACCTATCAACAGAGTGAACAGACAACCTACAGATTACTTTCCCTTCAGATaGTGGAAGGGATTTATACTA +
Preference number: 5 (lower is better)
Translates to: SFVRAKEPINRVNRQPTDYFPFR*WKGFIL
Trigger: TAGTATAAATCCCTTCCACAATCTGAAGGGAAAGTA...ATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp ATGCCTGCAAAGTTTGAACATTTGCTATTTACCCCAACAATCAGAAAGCTGTCCAAACAGGACCTAGTCTaGTTTAAGAAAGACTCCCTA +
Preference number: 5 (lower is better)
Translates to: MPAKFEHLLFTPTIRKLSKQDLV*FKKDSL
Trigger: TAGGGAGTCTTTCTTAAACAAGACTAGGTCCTGTTT...GGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp TTGGCCCAGTTGTATTTGGTTGTGTTAATTGGCTATTTTGGACACTCAAATGTGTTGGCCCAGTTGTATTaGGTTGTGTTAATTGGCTAT +
Preference number: 5 (lower is better)
Translates to: LAQLYLVVLIGYFGHSNVLAQLY*VVLIGY
Trigger: ATAGCCAATTAACACAACCAAATACAACTGGGCCAA...CACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAATACAACTGGGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGGAAGATGTGCAATTGTaGAAGTCTTTGTGTAGACTC +
Preference number: 5 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYREDVQL*KSLCRL
Trigger: GAGTCTACACAAAGACTTCAACAATTGCACATCTTC...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTGCAAAGTTTGAACATTaGCTATTTACCCCAACAATC +
Preference number: 5 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVAKFEH*LFTPTI
Trigger: GATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGC...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTAAATGCCTGCAAAGTTaGAACATTTGCTATTTACCC +
Preference number: 5 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVKCLQS*NICYLP
Trigger: GGGTAAATAGCAAATGTTCAAACTTTGCAGGCATTT...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp GTGTTAATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTAATGGCATCTTACAATaGACTGGCATCTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: VLIGYFGHSNVSEHCAVVNGILQ*TGIFLS
Trigger: AGAAAGAAAGATGCCAGTCAATTGTAAGATGCCATT...AACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp AATTGGCTATTTTGGACACTCAAATGTGTCAGAACACTGTGCAGTTGTTATAGGATTTCTATGCAGAGCTaGTGTAGGAAGAATGAAATC +
Preference number: 5 (lower is better)
Translates to: NWLFWTLKCVRTLCSCYRISMQS*CRKNEI
Trigger: GATTTCATTCTTCCTACACAAGCTCTGCATAGAAAT...CCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS-3UTR CAA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATTCTTCTGTGTCCTTCTaGAAGTCTAAAGTTTCACTC +
Preference number: 5 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYSSVSF*KSKVSL
Trigger: GAGTGAAACTTTAGACTTCAAGAAGGACACAGAAGA...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS-3UTR CAA 90 bp AGGGATATAATCTCTGCCCATCAAATATGGGTTTTCTCTTGTAAAGCTAAGTATGCAAAGTTTGAACATTaGCTATTTACCCCAACAATC +
Preference number: 5 (lower is better)
Translates to: RDIISAHQIWVFSCKAKYAKFEH*LFTPTI
Trigger: GATTGTTGGGGTAAATAGCAAATGTTCAAACTTTGC...ATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 72 bp GAGGGCGCCACAAAGTTGGGGACACGCCGGAAGCTTTaGTCCCGCGAGGGCGGTGGCACGGCCCCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: EGATKLGTRRKL*SREGGGTAPGG
Trigger: GCCACCAGGGGCCGTGCCACCGCCCTCGCGGGACCAAAGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 72 bp GGGAGCCGCTGTCCAGCGGCGAGTCCAGCAGCGCTCTaGCGCTGGAAGGCATCTCTAACCCAGTCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: GSRCPAASPAAL*RWKASLTQSPR
Trigger: CCGCGGCGACTGGGTTAGAGATGCCTTCCAGCGGCAGAGCGCTGCTGGACTCGCCGCTGGACAGCGGCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 72 bp CCAAGGCGCGTGTGCGGGAAGCAGGACAGCGCCTGCTaGGAGAGCACGAAGCGGCTGCCGCCCACGTTGACC +
Preference number: 6 (lower is better)
Translates to: PRRVCGKQDSAC*ESTKRLPPTLT
Trigger: GGTCAACGTGGGCGGCAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTGCTTCCCGCACACGCGCCTTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 72 bp GCCTGCTGCGAGAGCACGAAGCGGCTGCCGCCCACGTaGACCGTGAAGCAGTCCCCGAGCGCCAAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: ACCESTKRLPPT*TVKQSPSAKGS
Trigger: GGAGCCCTTGGCGCTCGGGGACTGCTTCACGGTCAACGTGGGCGGCAGCCGCTTCGTGCTCTCGCAGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 90 bp CAGGACAGCGCCTGCTGCGAGAGCACGAAGCGGCTGCCGCCCACGTaGACCGTGAAGCAGTCCCCGAGCGCCAAGGGCTCCCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: QDSACCESTKRLPPT*TVKQSPSAKGSPSP
Trigger: GGGTGAAGGGGAGCCCTTGGCGCTCGGGGACTGCTTCACGGTCAACGTGGGCGGCAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 72 bp TTGCCAAGGCGCGTGTGCGGGAAGCAGGACAGCGCCTaGTGCGAGAGCACGAAGCGGCTGCCGCCCACGTTG +
Preference number: 6 (lower is better)
Translates to: LPRRVCGKQDSA*CESTKRLPPTL
Trigger: CAACGTGGGCGGCAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTGCTTCCCGCACACGCGCCTTGGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 72 bp GGGATTCCCCGGGCTCCCGAAGGGGTTACCTCTCCTTaGCGCACCCTCTCCACCCGCTGTGCGCCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: GIPRAPEGVTSP*RTLSTRCAPSS
Trigger: GGAGGAAGGCGCACAGCGGGTGGAGAGGGTGCGCCAAGGAGAGGTAACCCCTTCGGGAGCCCGGGGAATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 72 bp CGCTGTCCAGCGGCGAGTCCAGCAGCGCTCTGCCGCTaGAAGGCATCTCTAACCCAGTCGCCGCGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: RCPAASPAALCR*KASLTQSPRPE
Trigger: CTCAGGCCGCGGCGACTGGGTTAGAGATGCCTTCCAGCGGCAGAGCGCTGCTGGACTCGCCGCTGGACAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 72 bp CGGGATTCCCCGGGCTCCCGAAGGGGTTACCTCTCCTaGGCGCACCCTCTCCACCCGCTGTGCGCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: RDSPGSRRGYLS*AHPLHPLCAFL
Trigger: GAGGAAGGCGCACAGCGGGTGGAGAGGGTGCGCCAAGGAGAGGTAACCCCTTCGGGAGCCCGGGGAATCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 72 bp CTAACCCAGTCGCCGCGGCCTGAGGGCGCCACAAAGTaGGGGACACGCCGGAAGCTTTGGTCCCGCGAGGGC +
Preference number: 6 (lower is better)
Translates to: LTQSPRPEGATK*GTRRKLWSREG
Trigger: GCCCTCGCGGGACCAAAGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCTCAGGCCGCGGCGACTGGGTTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 90 bp AAGGCATCTCTAACCCAGTCGCCGCGGCCTGAGGGCGCCACAAAGTaGGGGACACGCCGGAAGCTTTGGTCCCGCGAGGGCGGTGGCACG +
Preference number: 6 (lower is better)
Translates to: KASLTQSPRPEGATK*GTRRKLWSREGGGT
Trigger: CGTGCCACCGCCCTCGCGGGACCAAAGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCTCAGGCCGCGGCGACTGGGTTAGAGATGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS TCA 72 bp CCGCTGGAAGGCATCTCTAACCCAGTCGCCGCGGCCTaGGGGCGCCACAAAGTTGGGGACACGCCGGAAGCT +
Preference number: 6 (lower is better)
Translates to: PLEGISNPVAAA*GRHKVGDTPEA
Trigger: AGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCTCAGGCCGCGGCGACTGGGTTAGAGATGCCTTCCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 72 bp TGCGCCTTCCTCCTCCTGCCGCTAGGGAGCCGGGAGTaGGCGGAAGCAGCGCACAAGTGGCAGAAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: CAFLLLPLGSRE*AEAAHKWQKEE
Trigger: CTCCTCTTTCTGCCACTTGTGCGCTGCTTCCGCGCACTCCCGGCTCCCTAGCGGCAGGAGGAGGAAGGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 72 bp GTGCACACTGCCGGTCGCCCTGGCCCTTCCCAAACGTaGTCACCCCGCCTCCCAACTTCGCAATTGCGATTC +
Preference number: 6 (lower is better)
Translates to: VHTAGRPGPSQT*SPRLPTSQLRF
Trigger: GAATCGCAATTGCGAAGTTGGGAGGCGGGGTGACAACGTTTGGGAAGGGCCAGGGCGACCGGCAGTGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS CCA 72 bp CCTGGACAATGCGCCCCACGTTCTCCAGCTCCTGCGTaGTCTGGCTCCCACTTAGGCTCTCTACCAGAAGAG +
Preference number: 6 (lower is better)
Translates to: PGQCAPRSPAPA*SGSHLGSLPEE
Trigger: CTCTTCTGGTAGAGAGCCTAAGTGGGAGCCAGACCACGCAGGAGCTGGAGAACGTGGGGCGCATTGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 72 bp TTTAGCATGCGCAGAGCCCTGAGCAGCCTCAACACCTaGACAATGCGCCCCACGTTCTCCAGCTCCTGCGTG +
Preference number: 6 (lower is better)
Translates to: FSMRRALSSLNT*TMRPTFSSSCV
Trigger: CACGCAGGAGCTGGAGAACGTGGGGCGCATTGTCCAGGTGTTGAGGCTGCTCAGGGCTCTGCGCATGCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS TCA 72 bp TGGAATGTCTGCCCAGCTTTAGCATGCGCAGAGCCCTaGGCAGCCTCAACACCTGGACAATGCGCCCCACGT +
Preference number: 6 (lower is better)
Translates to: WNVCPALACAEP*AASTPGQCAPR
Trigger: ACGTGGGGCGCATTGTCCAGGTGTTGAGGCTGCTCAGGGCTCTGCGCATGCTAAAGCTGGGCAGACATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 72 bp ACAATGCGCCCCACGTTCTCCAGCTCCTGCGTGGTCTaGCTCCCACTTAGGCTCTCTACCAGAAGAGTGATG +
Preference number: 6 (lower is better)
Translates to: TMRPTFSSSCVV*LPLRLSTRRVM
Trigger: CATCACTCTTCTGGTAGAGAGCCTAAGTGGGAGCCAGACCACGCAGGAGCTGGAGAACGTGGGGCGCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 90 bp CCTGGCCCTTCCCAAACGTTGTCACCCCGCCTCCCAACTTCGCAATaGCGATTCCCAGCCCAGGAGGTGTACAGATTGAATGACTCGCTA +
Preference number: 6 (lower is better)
Translates to: PGPSQTLSPRLPTSQ*RFPAQEVYRLNDSL
Trigger: TAGCGAGTCATTCAATCTGTACACCTCCTGGGCTGGGAATCGCAATTGCGAAGTTGGGAGGCGGGGTGACAACGTTTGGGAAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS TCA 72 bp CGCAATTGCGATTCCCAGCCCAGGAGGTGTACAGATTaGATGACTCGCTACTTGGTGGGTGGAGGGGTTGGG +
Preference number: 6 (lower is better)
Translates to: RNCDSQPRRCTD*MTRYLVGGGVG
Trigger: CCCAACCCCTCCACCCACCAAGTAGCGAGTCATTCAATCTGTACACCTCCTGGGCTGGGAATCGCAATTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS CCA 72 bp TTAGCTGAACGCAAGCAAGCAAGCAAGCAAGGGGGATaGCGAGACTCACTCCTGCCCGCAGGAGACCAAAAC +
Preference number: 6 (lower is better)
Translates to: LAERKQASKQGG*RDSLLPAGDQN
Trigger: GTTTTGGTCTCCTGCGGGCAGGAGTGAGTCTCGCCATCCCCCTTGCTTGCTTGCTTGCTTGCGTTCAGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS CAA 72 bp TCGCAATTGCGATTCCCAGCCCAGGAGGTGTACAGATaGAATGACTCGCTACTTGGTGGGTGGAGGGGTTGG +
Preference number: 6 (lower is better)
Translates to: SQLRFPAQEVYR*NDSLLGGWRGW
Trigger: CCAACCCCTCCACCCACCAAGTAGCGAGTCATTCAATCTGTACACCTCCTGGGCTGGGAATCGCAATTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS CAA 72 bp TCCCAAACGTTGTCACCCCGCCTCCCAACTTCGCAATaGCGATTCCCAGCCCAGGAGGTGTACAGATTGAAT +
Preference number: 6 (lower is better)
Translates to: SQTLSPRLPTSQ*RFPAQEVYRLN
Trigger: ATTCAATCTGTACACCTCCTGGGCTGGGAATCGCAATTGCGAAGTTGGGAGGCGGGGTGACAACGTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524391.6
CDS GCA 72 bp CAGCTAATGCACACATACTCCAGGATTTCCAGCAGCTaGAGGTCCAGCCAGCTTAACTCAGCTGACATCAGG +
Preference number: 6 (lower is better)
Translates to: QLMHTYSRISSS*RSSQLNSADIR
Trigger: CCTGATGTCAGCTGAGTTAAGCTGGCTGGACCTGCAGCTGCTGGAAATCCTGGAGTATGTGTGCATTAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 72 bp GAAGATCCAGGTTTCTCCAGGATATTCCAGAGCTTCTaGCGAACAGTGGGACAAGGTCCTTGGGAGAAGTCC +
Preference number: 6 (lower is better)
Translates to: EDPGFSRIFQSF*RTVGQGPWEKS
Trigger: GGACTTCTCCCAAGGACCTTGTCCCACTGTTCGCCAGAAGCTCTGGAATATCCTGGAGAAACCTGGATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 90 bp CTCCAGGATATTCCAGAGCTTCTGGCGAACAGTGGGACAAGGTCCTaGGGAGAAGTCCTGTTCACTCTCATGTTGACTTTCCTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: LQDIPELLANSGTRS*GEVLFTLMLTFLVF
Trigger: GAAGACCAGGAAAGTCAACATGAGAGTGAACAGGACTTCTCCCAAGGACCTTGTCCCACTGTTCGCCAGAAGCTCTGGAATATCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS TCA 72 bp ATAGGAGCAGTAGGCCGACTTCTTCGTAACACTGGGTaGTTGTCATCCCAAGGGAGCGTAATCCTGTGGAAT +
Preference number: 6 (lower is better)
Translates to: IGAVGRLLRNTG*LSSQGSVILWN
Trigger: ATTCCACAGGATTACGCTCCCTTGGGATGACAATCACCCAGTGTTACGAAGAAGTCGGCCTACTGCTCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 72 bp ATTCCAGAGCTTCTGGCGAACAGTGGGACAAGGTCCTaGGGAGAAGTCCTGTTCACTCTCATGTTGACTTTC +
Preference number: 6 (lower is better)
Translates to: IPELLANSGTRS*GEVLFTLMLTF
Trigger: GAAAGTCAACATGAGAGTGAACAGGACTTCTCCCAAGGACCTTGTCCCACTGTTCGCCAGAAGCTCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS TCA 72 bp GCAAGGCCAAGACAAGAATTCCCGATAATATACACATaGAGGCCACGATTTTGCCTGTGGTGGTGTCTGGTC +
Preference number: 6 (lower is better)
Translates to: ARPRQEFPIIYT*RPRFCLWWCLV
Trigger: GACCAGACACCACCACAGGCAAAATCGTGGCCTTCATGTGTATATTATCGGGAATTCTTGTCTTGGCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CCA 72 bp ACACATGAAGGCCACGATTTTGCCTGTGGTGGTGTCTaGTCTAATGTCCCCATATCCCACAGTAGTCATAGA +
Preference number: 6 (lower is better)
Translates to: THEGHDFACGGV*SNVPISHSSHR
Trigger: TCTATGACTACTGTGGGATATGGGGACATTAGACCAGACACCACCACAGGCAAAATCGTGGCCTTCATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 90 bp GCCAAGACAAGAATTCCCGATAATATACACATGAAGGCCACGATTTaGCCTGTGGTGGTGTCTGGTCTAATGTCCCCATATCCCACAGTA +
Preference number: 6 (lower is better)
Translates to: AKTRIPDNIHMKATI*PVVVSGLMSPYPTV
Trigger: TACTGTGGGATATGGGGACATTAGACCAGACACCACCACAGGCAAAATCGTGGCCTTCATGTGTATATTATCGGGAATTCTTGTCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS TCA 72 bp CAAGGTCCTTGGGAGAAGTCCTGTTCACTCTCATGTTaGCTTTCCTGGTCTTCTGTGTCCTTCTTGAAGTCT +
Preference number: 6 (lower is better)
Translates to: QGPWEKSCSLSC*LSWSSVSFLKS
Trigger: AGACTTCAAGAAGGACACAGAAGACCAGGAAAGTCAACATGAGAGTGAACAGGACTTCTCCCAAGGACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 72 bp ACAAGGTCCTTGGGAGAAGTCCTGTTCACTCTCATGTaGACTTTCCTGGTCTTCTGTGTCCTTCTTGAAGTC +
Preference number: 6 (lower is better)
Translates to: TRSLGEVLFTLM*TFLVFCVLLEV
Trigger: GACTTCAAGAAGGACACAGAAGACCAGGAAAGTCAACATGAGAGTGAACAGGACTTCTCCCAAGGACCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 72 bp AGAATTCCCGATAATATACACATGAAGGCCACGATTTaGCCTGTGGTGGTGTCTGGTCTAATGTCCCCATAT +
Preference number: 6 (lower is better)
Translates to: RIPDNIHMKATI*PVVVSGLMSPY
Trigger: ATATGGGGACATTAGACCAGACACCACCACAGGCAAAATCGTGGCCTTCATGTGTATATTATCGGGAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 90 bp ACATCTCTCAAGTTAACACTGATATATGAGTCAGTGGCTATATTCTaGGTAAGCTTCTTTAGGGCTTCACGCTGTCTAACAGCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: TSLKLTLIYESVAIF*VSFFRASRCLTAAS
Trigger: GGAAGCAGCTGTTAGACAGCGTGAAGCCCTAAAGAAGCTTACCAAGAATATAGCCACTGACTCATATATCAGTGTTAACTTGAGAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS GCA 72 bp CAAGGGACACTTGTGAAGGTTGTGTCAGGAATGCTTTaGTCAGCAAAGTATTCTACAGTTGAAAATATAGAG +
Preference number: 6 (lower is better)
Translates to: QGTLVKVVSGML*SAKYSTVENIE
Trigger: CTCTATATTTTCAACTGTAGAATACTTTGCTGAGCAAAGCATTCCTGACACAACCTTCACAAGTGTCCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6
CDS CAA 72 bp AAGTTAACACTGATATATGAGTCAGTGGCTATATTCTaGGTAAGCTTCTTTAGGGCTTCACGCTGTCTAACA +
Preference number: 6 (lower is better)
Translates to: KLTLIYESVAIF*VSFFRASRCLT
Trigger: TGTTAGACAGCGTGAAGCCCTAAAGAAGCTTACCAAGAATATAGCCACTGACTCATATATCAGTGTTAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297404.1
ENST00000524391.6