RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNU1 (Homo sapiens)

Ensembl gene IDs: ENSG00000215262

Ensembl transcript IDs: ENST00000399881.8, ENST00000518904.1, ENST00000522372.5, ENST00000522417.1, ENST00000523973.5

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTATAACAAGCAGTGCTGAAGGGTATGGCACAAAACACAAGATCTaGAGGCAGCAGCTTGAACTCATTGGCTGGCCGGGTGATCACAAA +
Preference number: 1 (lower is better)
Translates to: FITSSAEGYGTKHKI*RQQLELIGWPGDHK
Trigger: TTTGTGATCACCCGGCCAGCCAATGAGTTCAAGCTGCTGCCTTCAGATCTTGTGTTTTGTGCCATACCCTTCAGCACTGCTTGTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR GCA 90 bp ACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTaGAGCTATCTGCCACACCATAGACTTTATCCTTATCTAAATGTT +
Preference number: 1 (lower is better)
Translates to: TEAPAYTGFFQTRAT*SYLPHHRLYPYLNV
Trigger: AACATTTAGATAAGGATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCGACGTGCAGCTATCTaGCACACCATAGACTTTATC +
Preference number: 2 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGRRAAI*HTIDFI
Trigger: GATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR-3UTR CCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACAATGGGCAGAAAAATaGCATGCTTCCATTCTTATT +
Preference number: 2 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEQWAEK*HASILI
Trigger: AATAAGAATGGAAGCATGCCATTTTTCTGCCCATTG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
3UTR-3UTR GCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGTCTACTCTGATTCCATaGTATTTGCTTAGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: CSKLASQEMICKQQVKSTSTLIP*YLLRKR
Trigger: TCTTTTCCTAAGCAAATAGCATGGAATCAGAGTAGA...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR-3UTR CCA 90 bp TTCATTCCTTTTATAACAAGCAGTGCTGAAGGGTATGGCACAAAACACAAGATCCAATGGGCAGAAAAATaGCATGCTTCCATTCTTATT +
Preference number: 2 (lower is better)
Translates to: FIPFITSSAEGYGTKHKIQWAEK*HASILI
Trigger: AATAAGAATGGAAGCATGCCATTTTTCTGCCCATTG...GATCTTGTGTTTTGTGCCATACCCTTCAGCACTGCTTGTTATAAAAGGAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR CAA 90 bp CTGAATCAATGGTGGGAGGACAATTTGTGTCTGAATGTGTCTCTGTaGTCTGTGATGCTTTATTTACAATTTCATATGACTTTTGCAATG +
Preference number: 2 (lower is better)
Translates to: LNQWWEDNLCLNVSL*SVMLYLQFHMTFAM
Trigger: CATTGCAAAAGTCATATGAAATTGTAAATAAAGCATCACAGACAACAGAGACACATTCAGACACAAATTGTCCTCCCACCATTGATTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR-3UTR GCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCAGAAAAATGGCATaGTTCCATTCTTATTTTCTT +
Preference number: 2 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCGRKMA*FHSYFL
Trigger: AAGAAAATAAGAATGGAAGCATGCCATTTTTCTGCC...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
3UTR TCA 72 bp AGCAGTGCTGAAGGGTATGGCACAAAACACAAGATCTaGAGGCAGCAGCTTGAACTCATTGGCTGGCCGGGT +
Preference number: 3 (lower is better)
Translates to: SSAEGYGTKHKI*RQQLELIGWPG
Trigger: ACCCGGCCAGCCAATGAGTTCAAGCTGCTGCCTTCAGATCTTGTGTTTTGTGCCATACCCTTCAGCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR GCA 72 bp CCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTaGAGCTATCTGCCACACCATAGACTTTATCCTTAT +
Preference number: 3 (lower is better)
Translates to: PAYTGFFQTRAT*SYLPHHRLYPY
Trigger: ATAAGGATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGGTGATCACAAACCTTTaGTTTTCTGGGTTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: CSKLASQEMICKQQVKSTVITNL*FSGLSS
Trigger: GGAGCTCAACCCAGAAAACAAAAGGTTTGTGATCAC...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR TCA 72 bp AATAAAGGTTGGTGGGATGGTAAAGATGTCTACGATTaGATTCATCTCCAGCCAGAACTTGATCTTGTCATC +
Preference number: 3 (lower is better)
Translates to: NKGWWDGKDVYD*IHLQPELDLVI
Trigger: GATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTTTACCATCCCACCAACCTTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR TCA 90 bp AGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTAAGCCCCATCGGGGCTaGGTGGGCATCTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: RSPSLHRFLPDKSDVQLSKPHRG*VGISKY
Trigger: GTATTTGGAGATGCCCACTCAGCCCCGATGGGGCTT...AGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp GCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCATCCAAATCCAACGGTTaGCGTTGTTGCCATGACCAG +
Preference number: 4 (lower is better)
Translates to: APAYTGFFQTRATCSYLPSKSNG*RCCHDQ
Trigger: CTGGTCATGGCAACAACGTCAACCGTTGGATTTGGA...TGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp CCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACAATCAGGCATGCCTCTaGAGATTCCACCGCAACTCG +
Preference number: 4 (lower is better)
Translates to: PAYTGFFQTRATCSYLPHNQACL*RFHRNS
Trigger: CGAGTTGCGGTGGAATCTGCAGAGGCATGCCTGATT...GTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp CAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCGGCTATAATCAGGCATaGCTCTGCAGATTCCACCGC +
Preference number: 4 (lower is better)
Translates to: QLTPVSSRQERRAAICHTGYNQA*LCRFHR
Trigger: GCGGTGGAATCTGCAGAGGCATGCCTGATTATAGCC...GGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp TCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGGCACTGTGATGTGCTaGCGGCTTCTGCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SCKDRSPSLHRFLPDKSDGTVMC*RLLLLQ
Trigger: CTGCAAAAGCAGAAGCCGGCAGCACATCACAGTGCC...GTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp AGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTCTACCAAAGTCTGGTTaGTTGATGGCTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RSPSLHRFLPDKSDVQLSLPKSG*LMAGVG
Trigger: CCCCACCCCAGCCATCAAGCAACCAGACTTTGGTAG...AGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp GCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCATGGAGGCTTCTTACATaGCTCCTAGCGATGGTACCT +
Preference number: 4 (lower is better)
Translates to: APAYTGFFQTRATCSYLPWRLLT*LLAMVP
Trigger: AGGTACCATCGCTAGGAGCCATGTAAGAAGCCTCCA...TGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp GTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCTCTCCAGCCAGAACTTaGTCTTGTCATCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VRTEAPAYTGFFQTRATCSPART*SCHQLP
Trigger: TGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGA...GCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp CGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGCCTGGTGGTGAAGTTTaGTATGCTCGAAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RVRTEAPAYTGFFQTRATPGGEV*YARSAC
Trigger: GCAAGCACTTCGAGCATATCAAACTTCACCACCAGG...CGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp AGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCGCTATCAACAGGAGGTaGATCTTCAGAAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SPSLHRFLPDKSDVQLSAAINRR*IFRKQS
Trigger: GCTCTGCTTTCTGAAGATGCACCTCCTGTTGATAGC...GGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp CCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACGAGGAGGAGTCAATTTaGAAGGATCCGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PAYTGFFQTRATCSYLPHEEESI*KDPMVR
Trigger: CCTCACCATCGGATCCTTGCAAATTGACTCCTCCTC...GTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp TCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACCAGACAAGAGCGACGTaGAGCTATCTGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: SCKDRSPSLHRFLPDKSDQTRAT*SYLPHH
Trigger: ATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTG...GTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518904.1
ENST00000522372.5
CDS-3UTR CCA 90 bp AGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTCCCATCGGGGCTGAGTaGGCATCTCCAAATACACAT +
Preference number: 4 (lower is better)
Translates to: RSPSLHRFLPDKSDVQLSPIGAE*ASPNTH
Trigger: ATGTGTATTTGGAGATGCCCACTCAGCCCCGATGGG...AGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACGAATTTTCCACCAGGTaGATGAATCCCGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TPVSSRQERRAAICHTIDEFSTR*MNPAAV
Trigger: CACAGCTGCGGGATTCATTCACCTGGTGGAAAATTC...GTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp CCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACGTTGGTTTGCACCAGTaGAACATCCCACTGCTATCA +
Preference number: 4 (lower is better)
Translates to: PAYTGFFQTRATCSYLPHVGLHQ*NIPLLS
Trigger: TGATAGCAGTGGGATGTTTCACTGGTGCAAACCAAC...GTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp AGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTACAGTGTGGCCTTCATaGACCACTAAGCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: RSPSLHRFLPDKSDVQLSTVWPS*TTKQWA
Trigger: TGCCCATTGCTTAGTGGTTCATGAAGGCCACACTGT...AGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp CCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCCAGAGCTTCTTCCTTaGAACTGGGATCCCTTTATG +
Preference number: 4 (lower is better)
Translates to: PAYTGFFQTRATCSYLPHPELLP*NWDPFM
Trigger: CATAAAGGGATCCCAGTTTCAAGGAAGAAGCTCTGG...GTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp TACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTGGCGGAGAATCCTaGCCTGATATACGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: YTGFFQTRATCSYLPHHRLGGES*PDIREE
Trigger: CTCCTCTCGTATATCAGGGCAGGATTCTCCGCCAAG...TCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp CGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGCCTTCCTGGTATAGTTaGTGGCTCTCAAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: RVRTEAPAYTGFFQTRATPSWYS*WLSRAL
Trigger: TAATGCCCTTGAGAGCCAGCAACTATACCAGGAAGG...CGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGAGCATTGCTCTATGTTaGCCGCATGGAGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FRVRTEAPAYTGFFQTRASIALC*PHGGLQ
Trigger: CTGGAGACCTCCATGCGGCCAACATAGAGCAATGCT...CGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp GCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACAAAGGTCTGGGCTaGAAGCAACATTTCTATATG +
Preference number: 4 (lower is better)
Translates to: APAYTGFFQTRATCSYLPHKGLG*KQHFYM
Trigger: CATATAGAAATGTTGCTTTCAGCCCAGACCTTTGTG...TGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp CAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCGTGAATTTCTACCTTTaGGCCAGGGATCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: QLTPVSSRQERRAAICHTVNFYL*ARDHQN
Trigger: ATTCTGGTGATCCCTGGCTCAAAGGTAGAAATTCAC...GGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATAGTGTTGATCTCTCCTaGCTTGTCGCGGAGGAAATT +
Preference number: 4 (lower is better)
Translates to: TEAPAYTGFFQTRATCSYSVDLS*LVAEEI
Trigger: AATTTCCTCCGCGACAAGTCAGGAGAGATCAACACT...ATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACCATTGGCTGGCCGGGTaGTCACAAACCTTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: TPVSSRQERRAAICHTIDHWLAG*SQTFCF
Trigger: AAAACAAAAGGTTTGTGATCACCCGGCCAGCCAATG...GTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp ACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCGACGTGCAGCTATCTaGCACACCATAGACTTTATC +
Preference number: 4 (lower is better)
Translates to: TEAPAYTGFFQTRATCSYRRAAI*HTIDFI
Trigger: GATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCG...ATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518904.1
ENST00000522372.5
CDS-3UTR CCA 90 bp ACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTGCAGATTTGTTTCTTaGAGGGACCCTTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TPVSSRQERRAAICHTIDCRFVS*RDPSSP
Trigger: TGGACTGGAAGGGTCCCTCCAAGAAACAAATCTGCA...GTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp CCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACAAACAATTTCAGTGTTaGTCTCTCCTGACTTGTCGC +
Preference number: 4 (lower is better)
Translates to: PAYTGFFQTRATCSYLPHKQFQC*SLLTCR
Trigger: GCGACAAGTCAGGAGAGATCAACACTGAAATTGTTT...GTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACAAAACAAGGCTCTTCTaGCGTCCTTTGGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TPVSSRQERRAAICHTIDKTRLF*RPLEFQ
Trigger: CTGAAACTCCAAAGGACGTCAGAAGAGCCTTGTTTT...GTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTTACCGATGGCACTGTaGTGTGCTGCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGLPMAL*CAAGFC
Trigger: GCAGAAGCCGGCAGCACATCACAGTGCCATCGGTAA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp ACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCAAGTTAAGAGCACGTaGAGAATATGGGCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: TEAPAYTGFFQTRATCSYQVKST*RIWAGL
Trigger: TAGACCTGCCCATATTCTTCACGTGCTCTTAACTTG...ATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp AAATGGTTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGGATCACCAACACTTaGCCCACAAAGGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KWFRVRTEAPAYTGFFQTRITNT*PTKVWA
Trigger: AGCCCAGACCTTTGTGGGGCAAGTGTTGGTGATCCT...TGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp GCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCAGATCTTGTCATCAGCTaGCATAAACCTCAATCCAAA +
Preference number: 4 (lower is better)
Translates to: APAYTGFFQTRATCSYLPDLVIS*HKPQSK
Trigger: TTTGGATTGAGGTTTATGGCAGCTGATGACAAGATC...TGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp CAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATCCTCCCACTTCATTaGAGATCCAGAAATGAACGT +
Preference number: 4 (lower is better)
Translates to: QLTPVSSRQERRAAICHTILPLH*RSRNER
Trigger: ACGTTCATTTCTGGATCTGCAATGAAGTGGGAGGAT...GGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp CCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACGTCTCCAGAATAAAGTaGACATCCAGGCAGAATGTA +
Preference number: 4 (lower is better)
Translates to: PAYTGFFQTRATCSYLPHVSRIK*TSRQNV
Trigger: TACATTCTGCCTGGATGTGCACTTTATTCTGGAGAC...GTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp GTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTATCCAGACAAGAGCGACGTaGAGCTATCTGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: VSSRQERRAAICHTIDFIQTRAT*SYLPHH
Trigger: ATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTG...GATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518904.1
ENST00000522372.5
CDS-3UTR CCA 90 bp ACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATTCACGAAATTGTCCCTaGAAGTGGAGGCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: TEAPAYTGFFQTRATCSYSRNCP*KWRLLT
Trigger: TGTAAGAAGCCTCCACTTCCAGGGACAATTTCGTGA...ATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp ACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTGCCCCACAAAGGTCTaGGCTGAAAGCAACATTTCT +
Preference number: 4 (lower is better)
Translates to: TGFFQTRATCSYLPHHRLCPTKV*AESNIS
Trigger: AGAAATGTTGCTTTCAGCCCAGACCTTTGTGGGGCA...AAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp ACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATTCCTGGTATAGTTGCTaGCTCTCAAGGGCATTACAA +
Preference number: 4 (lower is better)
Translates to: TEAPAYTGFFQTRATCSYSWYSC*LSRALQ
Trigger: TTGTAATGCCCTTGAGAGCCAGCAACTATACCAGGA...ATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp GTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAAAGATGTCTACGATTaGATTCATCTCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: VRTEAPAYTGFFQTRATCKDVYD*IHLQPE
Trigger: TTCTGGCTGGAGATGAATTCAATCGTAGACATCTTT...GCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCCGGAGAATCCTGCCCTaGTATACGAGAGGAGATTCC +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVARRILP*YTRGDS
Trigger: GGAATCTCCTCTCGTATATCAGGGCAGGATTCTCCG...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp ACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTAAATGTTGTTCCAGCTaGGAACTTACTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TGFFQTRATCSYLPHHRLKCCSS*ELTPPV
Trigger: GACAGGAGGAGTAAGTTCTCAGCTGGAACAACATTT...AAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518904.1
ENST00000522372.5
CDS-3UTR GCA 90 bp TCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACCTTGGATCTCAGTTGTaGAGGACATTTTTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SCKDRSPSLHRFLPDKSDLGSQL*RTFLAS
Trigger: ACTTGCCAAAAATGTCCTGCACAACTGAGATCCAAG...GTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp GAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCTTCTTTCCTTTGAGTaGTTCATAGGAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: EAPAYTGFFQTRATCSYLLLSFE*FIGTGV
Trigger: TACACCAGTTCCTATGAAGCACTCAAAGGAAAGAAG...CAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAGGCACTGTGATGTGCTaGCGGCTTCTGCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEGTVMC*RLLLLQ
Trigger: CTGCAAAAGCAGAAGCCGGCAGCACATCACAGTGCC...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCGATGGCACTGTGATGTaGTGCCGGCTTCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVADGTVM*CRLLLL
Trigger: CAAAAGCAGAAGCCGGCAGCACATCACAGTGCCATC...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTCCGATGGTGAGGGTTaGCATGATGGCTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVASDGEG*HDGFCV
Trigger: GACACAGAAGCCATCATGGCAACCCTCACCATCGGA...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCCAGACAAGAGCGACGTaGAGCTATCTGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAQTRAT*SYLPHH
Trigger: ATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTG...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp GTTGGTGGGATGGTAAAGATGTCTACGATTGAATTCATCTCCAGCCAGAACTTGCAACAGGGCAACACTTaGCCCACAAAGGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGGMVKMSTIEFISSQNLQQGNT*PTKVWA
Trigger: AGCCCAGACCTTTGTGGGGCAAGTGTTGCCCTGTTG...CAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTTTACCATCCCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAGAAGGTACACAAGCCTaGCACCAAACAGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEEGTQA*HQTALG
Trigger: GCCCAAGGCTGTTTGGTGCCAGGCTTGTGTACCTTC...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp TACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGAACAAGACAGCACACATaGAGCATTGCTCTATGTTGG +
Preference number: 4 (lower is better)
Translates to: YTGFFQTRATCSYLPHHRTRQHT*SIALCW
Trigger: CCAACATAGAGCAATGCTCCATGTGTGCTGTCTTGT...TCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACAGCAACATTTCTATATaGTCACGAAATTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPVSSRQERRAAICHTIDSNISI*SRNCPW
Trigger: CCAGGGACAATTTCGTGATCATATAGAAATGTTGCT...GTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp GTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTATCTCACACTGTCCACAGTaGTGTTTCCACAGACCACAA +
Preference number: 4 (lower is better)
Translates to: VSSRQERRAAICHTIDFISHCPQ*CFHRPQ
Trigger: TTGTGGTCTGTGGAAACATCACTGTGGACAGTGTGA...GATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCATTCAGCAAAGCAGATaGTGTTGTCTCCGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAIQQSR*CCLRCP
Trigger: GGGACACCGGAGACAACATCATCTGCTTTGCTGAAT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp ACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTCCGAAACTTATACTTTaGCTTGCCAGTTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TGFFQTRATCSYLPHHRLPKLIL*LASSFQ
Trigger: CTGAAACGAACTGGCAAGTCAAAGTATAAGTTTCGG...AAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGAAGCCCCATCGGGGCTaGGTGGGCATCTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTKPHRG*VGISKY
Trigger: GTATTTGGAGATGCCCACTCAGCCCCGATGGGGCTT...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCAGGATCACCAACACTTaGCCCACAAAGGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGRITNT*PTKVWA
Trigger: AGCCCAGACCTTTGTGGGGCAAGTGTTGGTGATCCT...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCAATCAGGCATGCCTCTaGAGATTCCACCGCAACTCG +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGNQACL*RFHRNS
Trigger: CGAGTTGCGGTGGAATCTGCAGAGGCATGCCTGATT...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCGGCTATAATCAGGCATaGCTCTGCAGATTCCACCGC +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGGYNQA*LCRFHR
Trigger: GCGGTGGAATCTGCAGAGGCATGCCTGATTATAGCC...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTGTGCTGCCGGCTTCTaGTTTTGCAGCCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGCAAGF*FCSHSL
Trigger: CAAACTGTGGCTGCAAAAGCAGAAGCCGGCAGCACA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACTTGGCGGAGAATCCTaGCCTGATATACGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHELGGES*PDIREE
Trigger: CTCCTCTCGTATATCAGGGCAGGATTCTCCGCCAAG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCGCACACATGGAGCATTaGTCTATGTTGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGAHMEH*SMLAAW
Trigger: CCATGCGGCCAACATAGAGCAATGCTCCATGTGTGC...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp GTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTATCCGACGTGCAGCTATCTaGCACACCATAGACTTTATC +
Preference number: 4 (lower is better)
Translates to: VSSRQERRAAICHTIDFIRRAAI*HTIDFI
Trigger: GATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCG...GATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518904.1
ENST00000522372.5
CDS-3UTR CCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTGGAGGCTTCTTACATaGCTCCTAGCGATGGTACCT +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAWRLLT*LLAMVP
Trigger: AGGTACCATCGCTAGGAGCCATGTAAGAAGCCTCCA...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp ACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTCCAGCTGGGAATCTTTaGCAGATAAACCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: TGFFQTRATCSYLPHHRLPAGNL*QINLVM
Trigger: CATAACAAGGTTTATCTGCCAAAGATTCCCAGCTGG...AAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp AAATGGTTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAGGGACTTGTATTCGATaGCTATCAACAGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KWFRVRTEAPAYTGFFQTGTCIR*LSTGGA
Trigger: TGCACCTCCTGTTGATAGCCATCGAATACAAGTCCC...TGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACCCATCGGGGCTGAGTaGGCATCTCCAAATACACAT +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEPIGAE*ASPNTH
Trigger: ATGTGTATTTGGAGATGCCCACTCAGCCCCGATGGG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCAGCATTGCTCTATGTTaGCCGCATGGAGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGSIALC*PHGGLQ
Trigger: CTGGAGACCTCCATGCGGCCAACATAGAGCAATGCT...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGTTTCGTAGCTTAGTCTaGAACATGTTCGAGACATCA +
Preference number: 4 (lower is better)
Translates to: FRVRTEAPAYTGFFQTRAFRSLV*NMFETS
Trigger: TGATGTCTCGAACATGTTTCAGACTAAGCTACGAAA...CGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCAGAATTTGCAAGATTTaGGGGAGTTCTAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVARICKI*GSSSRR
Trigger: GCGCCTGCTAGAACTCCCTCAAATCTTGCAAATTCT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAGAATTTTCCACCAGGTaGATGAATCCCGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEEFSTR*MNPAAV
Trigger: CACAGCTGCGGGATTCATTCACCTGGTGGAAAATTC...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATCCAAATCCAACGGTTaGCGTTGTTGCCATGACCAG +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHESKSNG*RCCHDQ
Trigger: CTGGTCATGGCAACAACGTCAACCGTTGGATTTGGA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AAATGGTTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACATTGCAGATCCAGAAATaGACGTTGTGTAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: KWFRVRTEAPAYTGFFQTLQIQK*TLCRPS
Trigger: ACTTGGCCTACACAACGTTCATTTCTGGATCTGCAA...TGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp GCTCCTCTTCATCAATTATTCGGTATAAGCCAACACACAGGATTCCAAAAAGATTTACCGATGGCACTGTaGTGTGCTGCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: APLHQLFGISQHTGFQKDLPMAL*CAAGFC
Trigger: GCAGAAGCCGGCAGCACATCACAGTGCCATCGGTAA...ATCTTTTTGGAATCCTGTGTGTTGGCTTATACCGAATAATTGATGAAGAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCGAAGAGTCCTGGTGGTaGAGTTTGATATGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAEESWW*SLICSK
Trigger: CTTCGAGCATATCAAACTTCACCACCAGGACTCTTC...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp GGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTATTGTTCTACATCATGTTaGAGAGTCCTGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GFFQTRATCSYLPHHRLYCSTSC*RVLVVK
Trigger: CTTCACCACCAGGACTCTTCAACATGATGTAGAACA...ATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCGTTGGTTTGCACCAGTaGAACATCCCACTGCTATCA +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAVGLHQ*NIPLLS
Trigger: TGATAGCAGTGGGATGTTTCACTGGTGCAAACCAAC...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp GGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTATAAATGTTGTTCCAGCTaGGAACTTACTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GFFQTRATCSYLPHHRLYKCCSS*ELTPPV
Trigger: GACAGGAGGAGTAAGTTCTCAGCTGGAACAACATTT...ATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518904.1
ENST00000522372.5
CDS-3UTR TCA 90 bp AGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTTTTTGTTTTCTGGGTTaGGCTCCTCTTCATCAATTA +
Preference number: 4 (lower is better)
Translates to: RSPSLHRFLPDKSDVQLSFCFLG*APLHQL
Trigger: TAATTGATGAAGAGGAGCTCAACCCAGAAAACAAAA...AGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp GTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTATCACAAAACACAAGATCTaGAGGCAGCAGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: VSSRQERRAAICHTIDFITKHKI*RQQLEL
Trigger: GAGTTCAAGCTGCTGCCTTCAGATCTTGTGTTTTGT...GATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTATGCTCGAAGTGCTTaGAGATACCCTTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGYARSA*RYPWRR
Trigger: TCTCCGCCAAGGGTATCTGCAAGCACTTCGAGCATA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp CAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATCTCCAAATACACATaGTACAATATGGTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: QLTPVSSRQERRAAICHTISKYT*YNMVPK
Trigger: TTTCGGAACCATATTGTAGCATGTGTATTTGGAGAT...GGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp CCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTCCAAAGGCACACATGGAGCATTaGTCTATGTTGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: PTHRIPKRSNEPQNSCPKAHMEH*SMLAAW
Trigger: CCATGCGGCCAACATAGAGCAATGCTCCATGTGTGC...CTTTGGACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACTCATCAGAGAGACGTTaGGTCAGAATTTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SCKDRSPSLHRFLPDKSDSSERR*VRILFF
Trigger: GAAAAACAAAATTCTGACCCAACGTCTCTCTGATGA...GTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCATTCTCTTTACCGATaGCACTGTGATGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGHSLYR*HCDVLP
Trigger: CGGCAGCACATCACAGTGCCATCGGTAAAGAGAATG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACCTTCAGCTCCTTCCTaGTATAGTTGCTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEPSAPS*YSCWLS
Trigger: TGAGAGCCAGCAACTATACCAGGAAGGAGCTGAAGG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp CTGATTCCATGCTATTTGCTTAGGAAAAGAGAGGGAGTTAGTTCTCGGCTGGTACCTTCAGCTCCTTCCTaGTATAGTTGCTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LIPCYLLRKREGVSSRLVPSAPS*YSCWLS
Trigger: TGAGAGCCAGCAACTATACCAGGAAGGAGCTGAAGG...TACCAGCCGAGAACTAACTCCCTCTCTTTTCCTAAGCAAATAGCATGGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCGTGTCTACCAAAGTCTaGTTGCTTGATGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGVSTKV*LLDGWG
Trigger: ACCCCAGCCATCAAGCAACCAGACTTTGGTAGACAC...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCAATTGTAGAAGGCCGTaGCCAGCAGAGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVANCRRP*PAENPR
Trigger: TCTTGGATTCTCTGCTGGCCACGGCCTTCTACAATT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399881.8
CDS-3UTR CCA 90 bp TACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGAAAACCTTTTGTTTTCTaGGTTGAGCTCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: YTGFFQTRATCSYLPHHRKPFVF*VELLFI
Trigger: GATGAAGAGGAGCTCAACCCAGAAAACAAAAGGTTT...TCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTGAACTCATTGGCTaGCCGGGTGATCACAAACCT +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGLELIG*PGDHKP
Trigger: AGGTTTGTGATCACCCGGCCAGCCAATGAGTTCAAG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCCTAGCGATGGTACCTaGTGTGAACAGTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGPSDGT*CEQFQD
Trigger: ATCTTGGAACTGTTCACATCAGGTACCATCGCTAGG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp GGGATGGTAAAGATGTCTACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGTCTCCAGCCAGAACTTaGTCTTGTCATCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GMVKMSTIEFISSQNLILSPART*SCHQLP
Trigger: TGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGA...CAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTTTACCATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTCACACTGTCCACAGTaGTGTTTCCACAGACCACAA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGSHCPQ*CFHRPQ
Trigger: TTGTGGTCTGTGGAAACATCACTGTGGACAGTGTGA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCAGTGTTGATCTCTCCTaGCTTGTCGCGGAGGAAATT +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGSVDLS*LVAEEI
Trigger: AATTTCCTCCGCGACAAGTCAGGAGAGATCAACACT...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp GGTGAATACAATGTCTCAGTAACTGAATCAATGGTGGGAGGACAATTTGTGTCTCGGAGAATCCTGCCCTaGTATACGAGAGGAGATTCC +
Preference number: 4 (lower is better)
Translates to: GEYNVSVTESMVGGQFVSRRILP*YTRGDS
Trigger: GGAATCTCCTCTCGTATATCAGGGCAGGATTCTCCG...AGACACAAATTGTCCTCCCACCATTGATTCAGTTACTGAGACATTGTATTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAAGTCCAGAGACCCAATaGACACTATGTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHESPETQ*TLCPSA
Trigger: AGCTGAAGGACATAGTGTTCATTGGGTCTCTGGACT...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACATTGGCTGGCCGGGTaGTCACAAACCTTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEHWLAG*SQTFCF
Trigger: AAAACAAAAGGTTTGTGATCACCCGGCCAGCCAATG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAGCTATCAACAGGAGGTaGATCTTCAGAAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEAINRR*IFRKQS
Trigger: GCTCTGCTTTCTGAAGATGCACCTCCTGTTGATAGC...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGTGTGCTGCCGGCTTCTaGTTTTGCAGCCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTCAAGF*FCSHSL
Trigger: CAAACTGTGGCTGCAAAAGCAGAAGCCGGCAGCACA...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp AAGTTAAGAGCACGTGAAGAATATGGGCAGGTCTATAGTGGCTCTGAATATGCATATGCTCGAAGTGCTTaGAGATACCCTTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: KLRAREEYGQVYSGSEYAYARSA*RYPWRR
Trigger: TCTCCGCCAAGGGTATCTGCAAGCACTTCGAGCATA...TGCATATTCAGAGCCACTATAGACCTGCCCATATTCTTCACGTGCTCTTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTCTACCAAAGTCTGGTTaGTTGATGGCTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCLPKSG*LMAGVG
Trigger: CCCCACCCCAGCCATCAAGCAACCAGACTTTGGTAG...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp GAGCCACAGAACAGTTGTCCAAAGGTGTTTCTTGGATTAACGTCTGATAAAATGTCCGATGGTGAGGGTTaGCATGATGGCTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: EPQNSCPKVFLGLTSDKMSDGEG*HDGFCV
Trigger: GACACAGAAGCCATCATGGCAACCCTCACCATCGGA...CATTTTATCAGACGTTAATCCAAGAAACACCTTTGGACAACTGTTCTGTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTCACGAAATTGTCCCTaGAAGTGGAGGCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVASRNCP*KWRLLT
Trigger: TGTAAGAAGCCTCCACTTCCAGGGACAATTTCGTGA...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTGCCCCACAAAGGTCTaGGCTGAAAGCAACATTTCT +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGCPTKV*AESNIS
Trigger: AGAAATGTTGCTTTCAGCCCAGACCTTTGTGGGGCA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTGTCCCAGTTCCAGCTaGGAATCTTTGGCAGATAAA +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVACPSSS*ESLADK
Trigger: TTTATCTGCCAAAGATTCCCAGCTGGAACTGGGACA...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCGGGACTTGTATTCGATaGCTATCAACAGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGGTCIR*LSTGGA
Trigger: TGCACCTCCTGTTGATAGCCATCGAATACAAGTCCC...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCACAAGACAGCACACATaGAGCATTGCTCTATGTTGG +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVATRQHT*SIALCW
Trigger: CCAACATAGAGCAATGCTCCATGTGTGCTGTCTTGT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATGCAGATTTGTTTCTTaGAGGGACCCTTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHECRFVS*RDPSSP
Trigger: TGGACTGGAAGGGTCCCTCCAAGAAACAAATCTGCA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp ACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACCCTAGCGATGGTACCTaGTGTGAACAGTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: TIEFISSQNLILSSAAINPSDGT*CEQFQD
Trigger: ATCTTGGAACTGTTCACATCAGGTACCATCGCTAGG...GTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGTCTCCAGCCAGAACTTaGTCTTGTCATCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTSPART*SCHQLP
Trigger: TGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGA...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTGAGTTACTGGTCTTaGTGGCTCGTAGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGLSYWS*WLVEFA
Trigger: TGCAAATTCTACGAGCCATCAAGACCAGTAACTCAG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAGTGAATTTCTACCTTTaGGCCAGGGATCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEVNFYL*ARDHQN
Trigger: ATTCTGGTGATCCCTGGCTCAAAGGTAGAAATTCAC...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGATTCAGCAAAGCAGATaGTGTTGTCTCCGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTIQQSR*CCLRCP
Trigger: GGGACACCGGAGACAACATCATCTGCTTTGCTGAAT...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCAAAACAAGGCTCTTCTaGCGTCCTTTGGAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGKTRLF*RPLEFQ
Trigger: CTGAAACTCCAAAGGACGTCAGAAGAGCCTTGTTTT...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TTGAACTCATTGGCTGGCCGGGTGATCACAAACCTTTTGTTTTCTGGGTTGAGCATCATCATGACAGACTaGACAGTAAAACAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LNSLAGRVITNLLFSGLSIIMTD*TVKQGS
Trigger: AGAGCCTTGTTTTACTGTTCAGTCTGTCATGATGAT...GCTCAACCCAGAAAACAAAAGGTTTGTGATCACCCGGCCAGCCAATGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGCCTGGTGGTGAAGTTTaGTATGCTCGAAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTPGGEV*YARSAC
Trigger: GCAAGCACTTCGAGCATATCAAACTTCACCACCAGG...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AAGTTAAGAGCACGTGAAGAATATGGGCAGGTCTATAGTGGCTCTGAATATGCAGAAGAGTCCTGGTGGTaGAGTTTGATATGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: KLRAREEYGQVYSGSEYAEESWW*SLICSK
Trigger: CTTCGAGCATATCAAACTTCACCACCAGGACTCTTC...TGCATATTCAGAGCCACTATAGACCTGCCCATATTCTTCACGTGCTCTTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATGTTCTACATCATGTTaGAGAGTCCTGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHECSTSC*RVLVVK
Trigger: CTTCACCACCAGGACTCTTCAACATGATGTAGAACA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAAAATGTTGTTCCAGCTaGGAACTTACTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEKCCSS*ELTPPV
Trigger: GACAGGAGGAGTAAGTTCTCAGCTGGAACAACATTT...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACAATGTCTCAGTAACTaGATCAATGGTGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEQCLSN*INGGRT
Trigger: TGTCCTCCCACCATTGATTCAGTTACTGAGACATTG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCAAGTTAAGAGCACGTaGAGAATATGGGCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGQVKST*RIWAGL
Trigger: TAGACCTGCCCATATTCTTCACGTGCTCTTAACTTG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGACAGTGTGGCCTTCATaGACCACTAAGCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTTVWPS*TTKQWA
Trigger: TGCCCATTGCTTAGTGGTTCATGAAGGCCACACTGT...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCAGAGAGAATGAATGCTaGTTGGATCTCAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVARENEC*LDLSCA
Trigger: TGCACAACTGAGATCCAAGCAGCATTCATTCTCTCT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACCTTGTTATGGGATTaGAGTATCTGTATGATGATT +
Preference number: 4 (lower is better)
Translates to: FRVRTEAPAYTGFFQTRATLLWD*SICMMI
Trigger: AATCATCATACAGATACTGCAATCCCATAACAAGGT...CGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGATGGCACTGTGATGTaGTGCCGGCTTCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCDGTVM*CRLLLL
Trigger: CAAAAGCAGAAGCCGGCAGCACATCACAGTGCCATC...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp CCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTCCAAAGCCAAAGAGGTTGGTTTaGACCAGTGAAACATCCCAC +
Preference number: 4 (lower is better)
Translates to: PTHRIPKRSNEPQNSCPKPKRLV*TSETSH
Trigger: GTGGGATGTTTCACTGGTGCAAACCAACCTCTTTGG...CTTTGGACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACCTCAATCCAAGAATGAATGCTGCTTaGATCTCAGTTGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FISSQNLILSSAAINLNPRMNAA*ISVVQD
Trigger: GTCCTGCACAACTGAGATCCAAGCAGCATTCATTCT...TGGATTGAGGTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CCA 90 bp ACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACTGCCCCACAAAGGTCTaGGCTGAAAGCAACATTTCT +
Preference number: 4 (lower is better)
Translates to: TIEFISSQNLILSSAAINCPTKV*AESNIS
Trigger: AGAAATGTTGCTTTCAGCCCAGACCTTTGTGGGGCA...GTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CCA 90 bp ACGTGCAGCTATCTGCCACACCATAGACTTTATCCTTATCTAAATGTTGTTCCACTTGAACTCATTGGCTaGCCGGGTGATCACAAACCT +
Preference number: 4 (lower is better)
Translates to: TCSYLPHHRLYPYLNVVPLELIG*PGDHKP
Trigger: AGGTTTGTGATCACCCGGCCAGCCAATGAGTTCAAG...TGGAACAACATTTAGATAAGGATAAAGTCTATGGTGTGGCAGATAGCTGCACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp GGTGAATACAATGTCTCAGTAACTGAATCAATGGTGGGAGGACAATTTGTGTCTCCTAGCGATGGTACCTaGTGTGAACAGTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GEYNVSVTESMVGGQFVSPSDGT*CEQFQD
Trigger: ATCTTGGAACTGTTCACATCAGGTACCATCGCTAGG...AGACACAAATTGTCCTCCCACCATTGATTCAGTTACTGAGACATTGTATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACACAAAGGTCTGGGCTaGAAGCAACATTTCTATATG +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEHKGLG*KQHFYM
Trigger: CATATAGAAATGTTGCTTTCAGCCCAGACCTTTGTG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACCTCAATCCACACAAAGGTCTGGGCTaGAAGCAACATTTCTATATG +
Preference number: 4 (lower is better)
Translates to: FISSQNLILSSAAINLNPHKGLG*KQHFYM
Trigger: CATATAGAAATGTTGCTTTCAGCCCAGACCTTTGTG...TGGATTGAGGTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTTTGGAAAACTTCACTaGGTTACTGGTCTTGATGGC +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGFGKLH*VTGLDG
Trigger: GCCATCAAGACCAGTAACTCAGTGAAGTTTTCCAAA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCATCATCATGACAGACTaGACAGTAAAACAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAIIMTD*TVKQGS
Trigger: AGAGCCTTGTTTTACTGTTCAGTCTGTCATGATGAT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCCGAAACTTATACTTTaGCTTGCCAGTTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGPKLIL*LASSFQ
Trigger: CTGAAACGAACTGGCAAGTCAAAGTATAAGTTTCGG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTATAACAAGCAGTGCTaGAGGGTATGGCACAAAACA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGYNKQC*RVWHKT
Trigger: TGTTTTGTGCCATACCCTTCAGCACTGCTTGTTATA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATATAACAAGCAGTGCTaGAGGGTATGGCACAAAACA +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEYNKQC*RVWHKT
Trigger: TGTTTTGTGCCATACCCTTCAGCACTGCTTGTTATA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp GTTGGTGGGATGGTAAAGATGTCTACGATTGAATTCATCTCCAGCCAGAACTTGGGAAGAGAGAATGAATaGTGCTTGGATCTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: VGGMVKMSTIEFISSQNLGRENE*CLDLSC
Trigger: ACAACTGAGATCCAAGCAGCATTCATTCTCTCTTCC...CAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTTTACCATCCCACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR GCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAATCCTCCCACTTCATTaGAGATCCAGAAATGAACGT +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEILPLH*RSRNER
Trigger: ACGTTCATTTCTGGATCTGCAATGAAGTGGGAGGAT...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCAGTGAAACATCCCACTaGTATCAAGCTGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGSETSH*YQAGQN
Trigger: ATTCTGACCAGCTTGATAGCAGTGGGATGTTTCACT...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGCCAAAGAGGTTGGTTTaGACCAGTGAAACATCCCAC +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTPKRLV*TSETSH
Trigger: GTGGGATGTTTCACTGGTGCAAACCAACCTCTTTGG...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TTGAACTCATTGGCTGGCCGGGTGATCACAAACCTTTTGTTTTCTGGGTTGAGCACTTATACTTTGACTTaGCAGTTCGTTTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LNSLAGRVITNLLFSGLSTYTLT*QFVSES
Trigger: TGACTCTGAAACGAACTGGCAAGTCAAAGTATAAGT...GCTCAACCCAGAAAACAAAAGGTTTGTGATCACCCGGCCAGCCAATGAGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGCCTTCCTGGTATAGTTaGTGGCTCTCAAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTPSWYS*WLSRAL
Trigger: TAATGCCCTTGAGAGCCAGCAACTATACCAGGAAGG...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAGTCTCCAGAATAAAGTaGACATCCAGGCAGAATGTA +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEVSRIK*TSRQNV
Trigger: TACATTCTGCCTGGATGTGCACTTTATTCTGGAGAC...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGAGGAGGAGTCAATTTaGAAGGATCCGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCEEESI*KDPMVR
Trigger: CCTCACCATCGGATCCTTGCAAATTGACTCCTCCTC...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TGGTTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGATCTACTCTGATTCCATaGTATTTGCTTAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: WFRVRTEAPAYTGFFQTRSTLIP*YLLRKR
Trigger: TCTTTTCCTAAGCAAATAGCATGGAATCAGAGTAGA...TCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp ACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACTCACGAAATTGTCCCTaGAAGTGGAGGCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: TIEFISSQNLILSSAAINSRNCP*KWRLLT
Trigger: TGTAAGAAGCCTCCACTTCCAGGGACAATTTCGTGA...GTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CCA 90 bp AAGTTAAGAGCACGTGAAGAATATGGGCAGGTCTATAGTGGCTCTGAATATGCAGTCCTAAGGATGTCTTaGCTACCACATCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: KLRAREEYGQVYSGSEYAVLRMS*LPHLQI
Trigger: GATTTGGAGATGTGGTAGCCAAGACATCCTTAGGAC...TGCATATTCAGAGCCACTATAGACCTGCCCATATTCTTCACGTGCTCTTAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCCAGCTGGGAATCTTTaGCAGATAAACCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGPAGNL*QINLVM
Trigger: CATAACAAGGTTTATCTGCCAAAGATTCCCAGCTGG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCCACTGCTATCAAGCTaGTCAGAATCTTGTTCTACA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGPLLSS*SESCST
Trigger: TGTAGAACAAGATTCTGACCAGCTTGATAGCAGTGG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACTTGTCCAAAGAGGTTaGTTTGCACCAGTGAAACAT +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHELVQRG*FAPVKH
Trigger: ATGTTTCACTGGTGCAAACCAACCTCTTTGGACAAG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTGTCCAAAGAGGTTaGTTTGCACCAGTGAAACAT +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGLVQRG*FAPVKH
Trigger: ATGTTTCACTGGTGCAAACCAACCTCTTTGGACAAG...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGTGTCTACCAAAGTCTaGTTGCTTGATGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCVSTKV*LLDGWG
Trigger: ACCCCAGCCATCAAGCAACCAGACTTTGGTAGACAC...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTTTCGTAGCTTAGTCTaGAACATGTTCGAGACATCA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGFRSLV*NMFETS
Trigger: TGATGTCTCGAACATGTTTCAGACTAAGCTACGAAA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTAGTCCAGAGACCCAATaGACACTATGTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCSPETQ*TLCPSA
Trigger: AGCTGAAGGACATAGTGTTCATTGGGTCTCTGGACT...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGACAAAACACAAGATCTaGAGGCAGCAGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTTKHKI*RQQLEL
Trigger: GAGTTCAAGCTGCTGCCTTCAGATCTTGTGTTTTGT...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp CTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACCTCAATCCAAAATACTTGGATCTCAGTTGTaGAGGACATTTTTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LQPELDLVISCHKPQSKILGSQL*RTFLAS
Trigger: ACTTGCCAAAAATGTCCTGCACAACTGAGATCCAAG...TATTTTGGATTGAGGTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR GCA 90 bp AAGTTAAGAGCACGTGAAGAATATGGGCAGGTCTATAGTGGCTCTGAATATGCAGGAAGAGAGAATGAATaGTGCTTGGATCTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KLRAREEYGQVYSGSEYAGRENE*CLDLSC
Trigger: ACAACTGAGATCCAAGCAGCATTCATTCTCTCTTCC...TGCATATTCAGAGCCACTATAGACCTGCCCATATTCTTCACGTGCTCTTAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCGATCTTGTCATCAGCTaGCATAAACCTCAATCCAAA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGDLVIS*HKPQSK
Trigger: TTTGGATTGAGGTTTATGGCAGCTGATGACAAGATC...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACCTCAATCCAGATCTTGTCATCAGCTaGCATAAACCTCAATCCAAA +
Preference number: 4 (lower is better)
Translates to: FISSQNLILSSAAINLNPDLVIS*HKPQSK
Trigger: TTTGGATTGAGGTTTATGGCAGCTGATGACAAGATC...TGGATTGAGGTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR GCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTTTGATATGCTCGAAGTaGTTGCAGATACCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCLICSK*LQIPLA
Trigger: CGCCAAGGGTATCTGCAAGCACTTCGAGCATATCAA...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TTGAACTCATTGGCTGGCCGGGTGATCACAAACCTTTTGTTTTCTGGGTTGAGCGGCAGAAAAATGGCATaGTTCCATTCTTATTTTCTT +
Preference number: 4 (lower is better)
Translates to: LNSLAGRVITNLLFSGLSGRKMA*FHSYFL
Trigger: AAGAAAATAAGAATGGAAGCATGCCATTTTTCTGCC...GCTCAACCCAGAAAACAAAAGGTTTGTGATCACCCGGCCAGCCAATGAGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGAGAATGAATGCTGCTTaGATCTCAGTTGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTRMNAA*ISVVQD
Trigger: GTCCTGCACAACTGAGATCCAAGCAGCATTCATTCT...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAAAACCTTTTGTTTTCTaGGTTGAGCTCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEKPFVF*VELLFI
Trigger: GATGAAGAGGAGCTCAACCCAGAAAACAAAAGGTTT...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCCAATGGGCAGAAAAATaGCATGCTTCCATTCTTATT +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAQWAEK*HASILI
Trigger: AATAAGAATGGAAGCATGCCATTTTTCTGCCCATTG...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
3UTR CAA 72 bp AAGATGTCTACGATTGAATTCATCTCCAGCCAGAACTaGATCTTGTCATCAGCTGCCATAAACCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: KMSTIEFISSQN*ILSSAAINLNP
Trigger: TGGATTGAGGTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR TCA 90 bp ACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACAGCAACATTTCTATATaGTCACGAAATTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TIEFISSQNLILSSAAINSNISI*SRNCPW
Trigger: CCAGGGACAATTTCGTGATCATATAGAAATGTTGCT...GTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR TCA 90 bp GCTCCTCTTCATCAATTATTCGGTATAAGCCAACACACAGGATTCCAAAAAGATCTGAGTTACTGGTCTTaGTGGCTCGTAGAATTTGCA +
Preference number: 4 (lower is better)
Translates to: APLHQLFGISQHTGFQKDLSYWS*WLVEFA
Trigger: TGCAAATTCTACGAGCCATCAAGACCAGTAACTCAG...ATCTTTTTGGAATCCTGTGTGTTGGCTTATACCGAATAATTGATGAAGAGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGAAACAATTTCAGTGTTaGTCTCTCCTGACTTGTCGC +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTKQFQC*SLLTCR
Trigger: GCGACAAGTCAGGAGAGATCAACACTGAAATTGTTT...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTTTGCAGATCCAGAAATaGACGTTGTGTAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCLQIQK*TLCRPS
Trigger: ACTTGGCCTACACAACGTTCATTTCTGGATCTGCAA...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGGGAAGAGAGAATGAATaGTGCTTGGATCTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTGRENE*CLDLSC
Trigger: ACAACTGAGATCCAAGCAGCATTCATTCTCTCTTCC...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGAGTGAAACATCCCACTaGTATCAAGCTGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTSETSH*YQAGQN
Trigger: ATTCTGACCAGCTTGATAGCAGTGGGATGTTTCACT...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCACTTATACTTTGACTTaGCAGTTCGTTTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGTYTLT*QFVSES
Trigger: TGACTCTGAAACGAACTGGCAAGTCAAAGTATAAGT...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCATCTCCAAATACACATaGTACAATATGGTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAISKYT*YNMVPK
Trigger: TTTCGGAACCATATTGTAGCATGTGTATTTGGAGAT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTAGAATGAATGCTGCTTaGATCTCAGTTGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCRMNAA*ISVVQD
Trigger: GTCCTGCACAACTGAGATCCAAGCAGCATTCATTCT...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAAGAAATAAAGGTTGGTaGGATGGTAAAGATGTCTAC +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHERNKGW*DGKDVY
Trigger: GTAGACATCTTTACCATCCCACCAACCTTTATTTCT...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp GTTGGTGGGATGGTAAAGATGTCTACGATTGAATTCATCTCCAGCCAGAACTTGAGAAATAAAGGTTGGTaGGATGGTAAAGATGTCTAC +
Preference number: 4 (lower is better)
Translates to: VGGMVKMSTIEFISSQNLRNKGW*DGKDVY
Trigger: GTAGACATCTTTACCATCCCACCAACCTTTATTTCT...CAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTTTACCATCCCACCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGTCCTAAGGATGTCTTaGCTACCACATCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCVLRMS*LPHLQI
Trigger: GATTTGGAGATGTGGTAGCCAAGACATCCTTAGGAC...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp CCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTCCAAAGGAAATATCTTCAGCATaGGAATCACTGCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: PTHRIPKRSNEPQNSCPKEISSA*ESLHKG
Trigger: TCCTTTGTGCAGTGATTCCCATGCTGAAGATATTTC...CTTTGGACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TATAAGCCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTTGTCCCAGTTCCAGCTaGGAATCTTTGGCAGATAAA +
Preference number: 4 (lower is better)
Translates to: YKPTHRIPKRSNEPQNSCCPSSS*ESLADK
Trigger: TTTATCTGCCAAAGATTCCCAGCTGGAACTGGGACA...ACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGGCTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCACCAAACAGCCTTaGGCGATAAATCCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCGTKQP*AINPSF
Trigger: AAAACTTGGATTTATCGCCCAAGGCTGTTTGGTGCC...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp TATAAGCCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTGGCACCAAACAGCCTTaGGCGATAAATCCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: YKPTHRIPKRSNEPQNSCGTKQP*AINPSF
Trigger: AAAACTTGGATTTATCGCCCAAGGCTGTTTGGTGCC...ACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGGCTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTCATCAGAGAGACGTTaGGTCAGAATTTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGSSERR*VRILFF
Trigger: GAAAAACAAAATTCTGACCCAACGTCTCTCTGATGA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTCTTCTGACGTCCTTTaGAGTTTCAGCAATAAAGAA +
Preference number: 4 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGSSDVL*SFSNKE
Trigger: TTCTTTATTGCTGAAACTCCAAAGGACGTCAGAAGA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTTCCTGGTATAGTTGCTaGCTCTCAAGGGCATTACAA +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCSWYSC*LSRALQ
Trigger: TTGTAATGCCCTTGAGAGCCAGCAACTATACCAGGA...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp AAGATGTCTACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTAAAGATGTCTACGATTaGATTCATCTCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: KMSTIEFISSQNLILSSAKDVYD*IHLQPE
Trigger: TTCTGGCTGGAGATGAATTCAATCGTAGACATCTTT...AGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR TCA 90 bp TTCATTCCTTTTATAACAAGCAGTGCTGAAGGGTATGGCACAAAACACAAGATCTTTGGAAAACTTCACTaGGTTACTGGTCTTGATGGC +
Preference number: 4 (lower is better)
Translates to: FIPFITSSAEGYGTKHKIFGKLH*VTGLDG
Trigger: GCCATCAAGACCAGTAACTCAGTGAAGTTTTCCAAA...GATCTTGTGTTTTGTGCCATACCCTTCAGCACTGCTTGTTATAAAAGGAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTCTTGGATCTCAGTTGTaGAGGACATTTTTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCLGSQL*RTFLAS
Trigger: ACTTGCCAAAAATGTCCTGCACAACTGAGATCCAAG...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTAGAGAGAATGAATGCTaGTTGGATCTCAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCRENEC*LDLSCA
Trigger: TGCACAACTGAGATCCAAGCAGCATTCATTCTCTCT...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAACCTTGTTATGGGATTaGAGTATCTGTATGATGATT +
Preference number: 4 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHETLLWD*SICMMI
Trigger: AATCATCATACAGATACTGCAATCCCATAACAAGGT...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGGAAATATCTTCAGCATaGGAATCACTGCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTEISSA*ESLHKG
Trigger: TCCTTTGTGCAGTGATTCCCATGCTGAAGATATTTC...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp AAGTTAAGAGCACGTGAAGAATATGGGCAGGTCTATAGTGGCTCTGAATATGCATCTTCTGACGTCCTTTaGAGTTTCAGCAATAAAGAA +
Preference number: 4 (lower is better)
Translates to: KLRAREEYGQVYSGSEYASSDVL*SFSNKE
Trigger: TTCTTTATTGCTGAAACTCCAAAGGACGTCAGAAGA...TGCATATTCAGAGCCACTATAGACCTGCCCATATTCTTCACGTGCTCTTAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTCCACTGCTATCAAGCTaGTCAGAATCTTGTTCTACA +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCPLLSS*SESCST
Trigger: TGTAGAACAAGATTCTGACCAGCTTGATAGCAGTGG...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTAGCAACATTTCTATATaGTCACGAAATTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCSNISI*SRNCPW
Trigger: CCAGGGACAATTTCGTGATCATATAGAAATGTTGCT...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTAAAGATGTCTACGATTaGATTCATCTCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCKDVYD*IHLQPE
Trigger: TTCTGGCTGGAGATGAATTCAATCGTAGACATCTTT...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGGACTTTTCGGCAGTTTaGTTTCTCATTATGTCCATT +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTDFSAV*FLIMSI
Trigger: AATGGACATAATGAGAAATCAAACTGCCGAAAAGTC...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp GAGCCACAGAACAGTTGTCCAAAGGTGTTTCTTGGATTAACGTCTGATAAAATGGACTTTTCGGCAGTTTaGTTTCTCATTATGTCCATT +
Preference number: 4 (lower is better)
Translates to: EPQNSCPKVFLGLTSDKMDFSAV*FLIMSI
Trigger: AATGGACATAATGAGAAATCAAACTGCCGAAAAGTC...CATTTTATCAGACGTTAATCCAAGAAACACCTTTGGACAACTGTTCTGTGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGTTTTGTTTTCTGGGTTaGGCTCCTCTTCATCAATTA +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTFCFLG*APLHQL
Trigger: TAATTGATGAAGAGGAGCTCAACCCAGAAAACAAAA...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR TCA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGCTGTTTGTTCTACTCTaGTTCCATGCTATTTGCTTA +
Preference number: 4 (lower is better)
Translates to: CSKLASQEMICKQQVKSTLFVLL*FHAICL
Trigger: TAAGCAAATAGCATGGAATCAGAGTAGAACAAACAG...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR GCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTCTTCTTTCCTTTGAGTaGTTCATAGGAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCLLSFE*FIGTGV
Trigger: TACACCAGTTCCTATGAAGCACTCAAAGGAAAGAAG...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CCA 90 bp GGTGAATACAATGTCTCAGTAACTGAATCAATGGTGGGAGGACAATTTGTGTCTAGAAATAAAGGTTGGTaGGATGGTAAAGATGTCTAC +
Preference number: 4 (lower is better)
Translates to: GEYNVSVTESMVGGQFVSRNKGW*DGKDVY
Trigger: GTAGACATCTTTACCATCCCACCAACCTTTATTTCT...AGACACAAATTGTCCTCCCACCATTGATTCAGTTACTGAGACATTGTATTCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
3UTR CAA 72 bp TATAATACTGTTTGTTCTACTCTGATTCCATGCTATTaGCTTAGGAAAAGAGAGGGAGTTAGTTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: YNTVCSTLIPCY*LRKREGVSSRL
Trigger: CAGCCGAGAACTAACTCCCTCTCTTTTCCTAAGCAAATAGCATGGAATCAGAGTAGAACAAACAGTATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CCA 90 bp GCTCCTCTTCATCAATTATTCGGTATAAGCCAACACACAGGATTCCAAAAAGATCAATGGGCAGAAAAATaGCATGCTTCCATTCTTATT +
Preference number: 4 (lower is better)
Translates to: APLHQLFGISQHTGFQKDQWAEK*HASILI
Trigger: AATAAGAATGGAAGCATGCCATTTTTCTGCCCATTG...ATCTTTTTGGAATCCTGTGTGTTGGCTTATACCGAATAATTGATGAAGAGGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR GCA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTTCTACTCTGATTCCATaGTATTTGCTTAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCSTLIP*YLLRKR
Trigger: TCTTTTCCTAAGCAAATAGCATGGAATCAGAGTAGA...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS GCA 90 bp GTCTCCTCTGACACTGAGGGTGACGGGTCAGAGGAGGAGTCAATTTaGAAGGATCCGATGGTGAGGGTTGCCATGATGGCTTCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: VSSDTEGDGSEEESI*KDPMVRVAMMASVS
Trigger: AGACACAGAAGCCATCATGGCAACCCTCACCATCGGATCCTTGCAAATTGACTCCTCCTCTGACCCGTCACCCTCAGTGTCAGAGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATAAGGATCACCAACACTaGCCCCACAAAGGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: TEAPAYTGFFQTRATCSYKDHQH*PHKGLG
Trigger: GCCCAGACCTTTGTGGGGCAAGTGTTGGTGATCCTT...ATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp CGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGGCAAAGCAGATGATGTaGTCTCCGGTGTCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RVRTEAPAYTGFFQTRATAKQMM*SPVSQF
Trigger: GAACTGGGACACCGGAGACAACATCATCTGCTTTGC...CGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp ACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATTCTACCAAAGTCTGGTaGCTTGATGGCTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TEAPAYTGFFQTRATCSYSTKVW*LDGWGG
Trigger: CCCACCCCAGCCATCAAGCAACCAGACTTTGGTAGA...ATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACAGAGGAGGAGTCAATTaGCAAGGATCCGATGGTGAG +
Preference number: 5 (lower is better)
Translates to: SCKDRSPSLHRFLPDKSDRGGVN*QGSDGE
Trigger: CTCACCATCGGATCCTTGCAAATTGACTCCTCCTCT...GTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp GGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTATTCTGAAGGCAGCAGCTaGAACTCATTGGCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: GFFQTRATCSYLPHHRLYSEGSS*NSLAGR
Trigger: CCGGCCAGCCAATGAGTTCAAGCTGCTGCCTTCAGA...ATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS TCA 90 bp GCTGGCTCTCAAGGGCATTACAAAGTTCCGAAGCCCCATCGGGGCTaGGTGGGCATCTCCAAATACACATGCTACAATATGGTTCCGAAA +
Preference number: 5 (lower is better)
Translates to: AGSQGHYKVPKPHRG*VGISKYTCYNMVPK
Trigger: TTTCGGAACCATATTGTAGCATGTGTATTTGGAGATGCCCACTCAGCCCCGATGGGGCTTCGGAACTTTGTAATGCCCTTGAGAGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp GAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGTCCGTAAAGAGGGACTaGTATTCGATGGCTATCAAC +
Preference number: 5 (lower is better)
Translates to: EAPAYTGFFQTRATCSYLSVKRD*YSMAIN
Trigger: GTTGATAGCCATCGAATACAAGTCCCTCTTTACGGA...CAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp AAATGGTTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGCAGCTTGAACTCATaGGCTGGCCGGGTGATCACA +
Preference number: 5 (lower is better)
Translates to: KWFRVRTEAPAYTGFFQTSSLNS*AGRVIT
Trigger: TGTGATCACCCGGCCAGCCAATGAGTTCAAGCTGCT...TGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp GCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACTGATTCCATGCTATTaGCTTAGGAAAAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: APAYTGFFQTRATCSYLPLIPCY*LRKREG
Trigger: TCCCTCTCTTTTCCTAAGCAAATAGCATGGAATCAG...TGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp CGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTTGTGCAGGACATTTTaGGCAAGTCTTCCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: RVRTEAPAYTGFFQTRATLCRTF*ASLPKF
Trigger: AAACTTGGGAAGACTTGCCAAAAATGTCCTGCACAA...CGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp ACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATTATATGATCACGAAATaGTCCCTGGAAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: TEAPAYTGFFQTRATCSYYMITK*SLEVEA
Trigger: AGCCTCCACTTCCAGGGACAATTTCGTGATCATATA...ATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCAAGGATCACCAACACTaGCCCCACAAAGGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAKDHQH*PHKGLG
Trigger: GCCCAGACCTTTGTGGGGCAAGTGTTGGTGATCCTT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACAGCCAGAACTTGATCTaGTCATCAGCTGCCATAAAC +
Preference number: 5 (lower is better)
Translates to: TPVSSRQERRAAICHTIDSQNLI*SSAAIN
Trigger: GTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCT...GTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp ACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTCACTGCACAAAGGATaGGCTATAATCAGGCATGCC +
Preference number: 5 (lower is better)
Translates to: TGFFQTRATCSYLPHHRLSLHKG*AIIRHA
Trigger: GGCATGCCTGATTATAGCCAATCCTTTGTGCAGTGA...AAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTGCTTGCAGATACCCTaGGCGGAGAATCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGCLQIP*AENPAL
Trigger: CAGGGCAGGATTCTCCGCCAAGGGTATCTGCAAGCA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGCGTTTCAGAGTCACCTaGTCCAAAGAGGTTGGTTTG +
Preference number: 5 (lower is better)
Translates to: FRVRTEAPAYTGFFQTRARFRVT*SKEVGL
Trigger: CAAACCAACCTCTTTGGACAAGGTGACTCTGAAACG...CGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp GCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCAGGACTTTTCGGCAGTTaGATTTCTCATTATGTCCAT +
Preference number: 5 (lower is better)
Translates to: APAYTGFFQTRATCSYLPGLFGS*ISHYVH
Trigger: ATGGACATAATGAGAAATCAAACTGCCGAAAAGTCC...TGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp GCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACTTTTGTTTTCTGGGTaGAGCTCCTCTTCATCAATT +
Preference number: 5 (lower is better)
Translates to: APAYTGFFQTRATCSYLPLLFSG*SSSSSI
Trigger: AATTGATGAAGAGGAGCTCAACCCAGAAAACAAAAG...TGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATCTGAAGGCAGCAGCTaGAACTCATTGGCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHESEGSS*NSLAGR
Trigger: CCGGCCAGCCAATGAGTTCAAGCTGCTGCCTTCAGA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACCCAACAGGGCAACACTaGCCCCACAAAGGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: TIEFISSQNLILSSAAINPTGQH*PHKGLG
Trigger: GCCCAGACCTTTGTGGGGCAAGTGTTGCCCTGTTGG...GTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS CCA 90 bp GCTCTCAAGGGCATTACAAAGTTCCGAAGCCCCATCGGGGCTGAGTaGGCATCTCCAAATACACATGCTACAATATGGTTCCGAAACTTA +
Preference number: 5 (lower is better)
Translates to: ALKGITKFRSPIGAE*ASPNTHATIWFRNL
Trigger: TAAGTTTCGGAACCATATTGTAGCATGTGTATTTGGAGATGCCCACTCAGCCCCGATGGGGCTTCGGAACTTTGTAATGCCCTTGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAGAGCATTGCTCTATGTaGGCCGCATGGAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEEHCSM*AAWRSP
Trigger: TGGAGACCTCCATGCGGCCAACATAGAGCAATGCTC...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp CTGATTCCATGCTATTTGCTTAGGAAAAGAGAGGGAGTTAGTTCTCGGCTGGTAGAGCATTGCTCTATGTaGGCCGCATGGAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LIPCYLLRKREGVSSRLVEHCSM*AAWRSP
Trigger: TGGAGACCTCCATGCGGCCAACATAGAGCAATGCTC...TACCAGCCGAGAACTAACTCCCTCTCTTTTCCTAAGCAAATAGCATGGAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCAGCACACATGGAGCATaGCTCTATGTTGGCCGCATG +
Preference number: 5 (lower is better)
Translates to: ITQDPVALDFCLTQNSVASTHGA*LYVGRM
Trigger: CATGCGGCCAACATAGAGCAATGCTCCATGTGTGCT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp GTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTATCATGCAGATTTGTTTCTaGGAGGGACCCTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: VSSRQERRAAICHTIDFIMQICF*EGPFQS
Trigger: GGACTGGAAGGGTCCCTCCAAGAAACAAATCTGCAT...GATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS TCA 90 bp TCCAGAGAAATCGCCATTCTCTCTGTAGATAGTCCAGAGACCCAATaGACACTATGTCCTTCAGCTCCTTCCTGGTATAGTTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SREIAILSVDSPETQ*TLCPSAPSWYSCWL
Trigger: GAGCCAGCAACTATACCAGGAAGGAGCTGAAGGACATAGTGTTCATTGGGTCTCTGGACTATCTACAGAGAGAATGGCGATTTCTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS TCA 90 bp GAACAGCTTCCAACAGGGCAACACTTGCCCCACAAAGGTCTGGGCTaGAAGCAACATTTCTATATGATCACGAAATTGTCCCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: EQLPTGQHLPHKGLG*KQHFYMITKLSLEV
Trigger: CACTTCCAGGGACAATTTCGTGATCATATAGAAATGTTGCTTTCAGCCCAGACCTTTGTGGGGCAAGTGTTGCCCTGTTGGAAGCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS GCA 90 bp CTCTGCAGATTCCACCGCAACTCGCCTCAGATCCTCCCACTTCATTaGAGATCCAGAAATGAACGTTGTGTAGGCCAAGTAGCATTTAAA +
Preference number: 5 (lower is better)
Translates to: LCRFHRNSPQILPLH*RSRNERCVGQVAFK
Trigger: TTTAAATGCTACTTGGCCTACACAACGTTCATTTCTGGATCTGCAATGAAGTGGGAGGATCTGAGGCGAGTTGCGGTGGAATCTGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TTTCGTGTAAGGACAGAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGTTGTTCTACATCATGTaGAAGAGTCCTGGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: FRVRTEAPAYTGFFQTRALFYIM*KSPGGE
Trigger: TTCACCACCAGGACTCTTCAACATGATGTAGAACAA...CGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTCTGTCCTTACACGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAAGCACACATGGAGCATaGCTCTATGTTGGCCGCATG +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHESTHGA*LYVGRM
Trigger: CATGCGGCCAACATAGAGCAATGCTCCATGTGTGCT...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp GAAGCCCCAGCTTACACCGGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCTGAATGTGTCTCTGTaGTCTGTGATGCTTTATTTA +
Preference number: 5 (lower is better)
Translates to: EAPAYTGFFQTRATCSYLLNVSL*SVMLYL
Trigger: TAAATAAAGCATCACAGACAACAGAGACACATTCAG...CAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACCGGTGTAAGCTGGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS TCA 90 bp AACACTTGCCCCACAAAGGTCTGGGCTGAAAGCAACATTTCTATATaGTCACGAAATTGTCCCTGGAAGTGGAGGCTTCTTACATGGCTC +
Preference number: 5 (lower is better)
Translates to: NTCPTKVWAESNISI*SRNCPWKWRLLTWL
Trigger: GAGCCATGTAAGAAGCCTCCACTTCCAGGGACAATTTCGTGATCATATAGAAATGTTGCTTTCAGCCCAGACCTTTGTGGGGCAAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000522417.1
ENST00000523973.5
CDS GCA 90 bp ACTTGCCAGTTCGTTTCAGAGTCACCTTGTCCAAAGAGGTTGGTTTaGACCAGTGAAACATCCCACTGCTATCAAGCTGGTCAGAATCTT +
Preference number: 5 (lower is better)
Translates to: TCQFVSESPCPKRLV*TSETSHCYQAGQNL
Trigger: AAGATTCTGACCAGCTTGATAGCAGTGGGATGTTTCACTGGTGCAAACCAACCTCTTTGGACAAGGTGACTCTGAAACGAACTGGCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 90 bp CCCATCGGGGCTGAGTGGGCATCTCCAAATACACATGCTACAATATaGTTCCGAAACTTATACTTTGACTTGCCAGTTCGTTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PIGAEWASPNTHATI*FRNLYFDLPVRFRV
Trigger: GACTCTGAAACGAACTGGCAAGTCAAAGTATAAGTTTCGGAACCATATTGTAGCATGTGTATTTGGAGATGCCCACTCAGCCCCGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATTGATCTCTCCTGACTaGTCGCGGAGGAAATTCCTC +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHELISPD*SRRKFL
Trigger: GAGGAATTTCCTCCGCGACAAGTCAGGAGAGATCAA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTCACTGCACAAAGGATaGGCTATAATCAGGCATGCC +
Preference number: 5 (lower is better)
Translates to: ITQDPVALDFCLTQNSVASLHKG*AIIRHA
Trigger: GGCATGCCTGATTATAGCCAATCCTTTGTGCAGTGA...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTGGCACCAAACAGCCTaGGGCGATAAATCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAWHQTA*GDKSKF
Trigger: AAACTTGGATTTATCGCCCAAGGCTGTTTGGTGCCA...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TATAAGCCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTTGCTTGCAGATACCCTaGGCGGAGAATCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: YKPTHRIPKRSNEPQNSCCLQIP*AENPAL
Trigger: CAGGGCAGGATTCTCCGCCAAGGGTATCTGCAAGCA...ACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGGCTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGTCTACCAAAGTCTGGTaGCTTGATGGCTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTSTKVW*LDGWGG
Trigger: CCCACCCCAGCCATCAAGCAACCAGACTTTGGTAGA...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS TCA 90 bp TTCACTGAGTTACTGGTCTTGATGGCTCGTAGAATTTGCAAGATTTaGGGGAGTTCTAGCAGGCGCAAGGCTCTTAGGAACCTTAAACCT +
Preference number: 5 (lower is better)
Translates to: FTELLVLMARRICKI*GSSSRRKALRNLKP
Trigger: AGGTTTAAGGTTCCTAAGAGCCTTGCGCCTGCTAGAACTCCCTCAAATCTTGCAAATTCTACGAGCCATCAAGACCAGTAACTCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS TCA 90 bp GTTCGTTTCAGAGTCACCTTGTCCAAAGAGGTTGGTTTGCACCAGTaGAACATCCCACTGCTATCAAGCTGGTCAGAATCTTGTTCTACA +
Preference number: 5 (lower is better)
Translates to: VRFRVTLSKEVGLHQ*NIPLLSSWSESCST
Trigger: TGTAGAACAAGATTCTGACCAGCTTGATAGCAGTGGGATGTTTCACTGGTGCAAACCAACCTCTTTGGACAAGGTGACTCTGAAACGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS GCA 90 bp GATGAGTCCACTGAAGAAGGTCACAAAGGAAGAGAGAATGAATGCTaGTTGGATCTCAGTTGTGCAGGACATTTTTGGCAAGTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: DESTEEGHKGRENEC*LDLSCAGHFWQVFP
Trigger: TGGGAAGACTTGCCAAAAATGTCCTGCACAACTGAGATCCAAGCAGCATTCATTCTCTCTTCCTTTGTGACCTTCTTCAGTGGACTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000522417.1
ENST00000523973.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAGAGAATGAATGCTGCTaGGATCTCAGTTGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHEENECC*DLSCAG
Trigger: TCCTGCACAACTGAGATCCAAGCAGCATTCATTCTC...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCAGCCAGAACTTGATCTaGTCATCAGCTGCCATAAAC +
Preference number: 5 (lower is better)
Translates to: ITQDPVALDFCLTQNSVASQNLI*SSAAIN
Trigger: GTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp GGGATGGTAAAGATGTCTACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGATCTCCAGCCAGAACTaGATCTTGTCATCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: GMVKMSTIEFISSQNLILISSQN*ILSSAA
Trigger: GGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGAT...CAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTTTACCATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CAA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCACTGAGTTACTGGTCTaGATGGCTCGTAGAATTTGC +
Preference number: 5 (lower is better)
Translates to: ITQDPVALDFCLTQNSVATELLV*MARRIC
Trigger: GCAAATTCTACGAGCCATCAAGACCAGTAACTCAGT...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACGTCCTAAGGATGTCTaGGCTACCACATCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHERPKDV*ATTSPN
Trigger: ATTTGGAGATGTGGTAGCCAAGACATCCTTAGGACG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCGTGATCACAAACCTTTaGTTTTCTGGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAVITNL*FSGLSS
Trigger: GGAGCTCAACCCAGAAAACAAAAGGTTTGTGATCAC...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTAGCAGCTTGAACTCATaGGCTGGCCGGGTGATCACA +
Preference number: 5 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCSSLNS*AGRVIT
Trigger: TGTGATCACCCGGCCAGCCAATGAGTTCAAGCTGCT...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTGGTGGGAGGACAATTaGTGTCTGAATGTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGWWEDN*CLNVSL
Trigger: CAGAGACACATTCAGACACAAATTGTCCTCCCACCA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp CTGATTCCATGCTATTTGCTTAGGAAAAGAGAGGGAGTTAGTTCTCGGCTGGTATGGTGGGAGGACAATTaGTGTCTGAATGTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LIPCYLLRKREGVSSRLVWWEDN*CLNVSL
Trigger: CAGAGACACATTCAGACACAAATTGTCCTCCCACCA...TACCAGCCGAGAACTAACTCCCTCTCTTTTCCTAAGCAAATAGCATGGAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS TCA 90 bp TACAAAGACAAGGATCACCAACACTTGCCCCACAAAGGTCTGGGCTaGAAGCAACATTTCTATATGATCACGAAATTGTCCCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: YKDKDHQHLPHKGLG*KQHFYMITKLSLEV
Trigger: CACTTCCAGGGACAATTTCGTGATCATATAGAAATGTTGCTTTCAGCCCAGACCTTTGTGGGGCAAGTGTTGGTGATCCTTGTCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS GCA 90 bp GATGATGAGTCCACTGAAGAAGGTCACAAAGGAAGAGAGAATGAATaGTGCTTGGATCTCAGTTGTGCAGGACATTTTTGGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: DDESTEEGHKGRENE*CLDLSCAGHFWQVF
Trigger: GAAGACTTGCCAAAAATGTCCTGCACAACTGAGATCCAAGCAGCATTCATTCTCTCTTCCTTTGTGACCTTCTTCAGTGGACTCATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000522417.1
ENST00000523973.5
CDS GCA 90 bp TCACCTTGTCCAAAGAGGTTGGTTTGCACCAGTGAAACATCCCACTaGTATCAAGCTGGTCAGAATCTTGTTCTACATCATGTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: SPCPKRLVCTSETSH*YQAGQNLVLHHVEE
Trigger: CTCTTCAACATGATGTAGAACAAGATTCTGACCAGCTTGATAGCAGTGGGATGTTTCACTGGTGCAAACCAACCTCTTTGGACAAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 90 bp AGTCCACTGAAGAAGGTCACAAAGGAAGAGAGAATGAATGCTGCTTaGATCTCAGTTGTGCAGGACATTTTTGGCAAGTCTTCCCAAGTT +
Preference number: 5 (lower is better)
Translates to: SPLKKVTKEERMNAA*ISVVQDIFGKSSQV
Trigger: AACTTGGGAAGACTTGCCAAAAATGTCCTGCACAACTGAGATCCAAGCAGCATTCATTCTCTCTTCCTTTGTGACCTTCTTCAGTGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000522417.1
ENST00000523973.5
CDS-3UTR CAA 90 bp AAGTTAAGAGCACGTGAAGAATATGGGCAGGTCTATAGTGGCTCTGAATATGCAGAGAATGAATGCTGCTaGGATCTCAGTTGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: KLRAREEYGQVYSGSEYAENECC*DLSCAG
Trigger: TCCTGCACAACTGAGATCCAAGCAGCATTCATTCTC...TGCATATTCAGAGCCACTATAGACCTGCCCATATTCTTCACGTGCTCTTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTATATGATCACGAAATaGTCCCTGGAAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGYMITK*SLEVEA
Trigger: AGCCTCCACTTCCAGGGACAATTTCGTGATCATATA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp CATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACCTCAATCCAAATATATGATCACGAAATaGTCCCTGGAAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: HLQPELDLVISCHKPQSKYMITK*SLEVEA
Trigger: AGCCTCCACTTCCAGGGACAATTTCGTGATCATATA...TTTGGATTGAGGTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGATCTCCAGCCAGAACTaGATCTTGTCATCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTISSQN*ILSSAA
Trigger: GGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGAT...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp GAGCCACAGAACAGTTGTCCAAAGGTGTTTCTTGGATTAACGTCTGATAAAATGATCTCCAGCCAGAACTaGATCTTGTCATCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: EPQNSCPKVFLGLTSDKMISSQN*ILSSAA
Trigger: GGCAGCTGATGACAAGATCAAGTTCTGGCTGGAGAT...CATTTTATCAGACGTTAATCCAAGAAACACCTTTGGACAACTGTTCTGTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAACTGAGTTACTGGTCTaGATGGCTCGTAGAATTTGC +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHETELLV*MARRIC
Trigger: GCAAATTCTACGAGCCATCAAGACCAGTAACTCAGT...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATGTGAATTTCTACCTTaGAGCCAGGGATCACCAGAA +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHECEFLP*SQGSPE
Trigger: TTCTGGTGATCCCTGGCTCAAAGGTAGAAATTCACA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp GAGCCACAGAACAGTTGTCCAAAGGTGTTTCTTGGATTAACGTCTGATAAAATGTTGATCTCTCCTGACTaGTCGCGGAGGAAATTCCTC +
Preference number: 5 (lower is better)
Translates to: EPQNSCPKVFLGLTSDKMLISPD*SRRKFL
Trigger: GAGGAATTTCCTCCGCGACAAGTCAGGAGAGATCAA...CATTTTATCAGACGTTAATCCAAGAAACACCTTTGGACAACTGTTCTGTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGCAAAGCAGATGATGTaGTCTCCGGTGTCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCAKQMM*SPVSQF
Trigger: GAACTGGGACACCGGAGACAACATCATCTGCTTTGC...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp CCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTCCAAAGTGGCACCAAACAGCCTaGGGCGATAAATCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: PTHRIPKRSNEPQNSCPKWHQTA*GDKSKF
Trigger: AAACTTGGATTTATCGCCCAAGGCTGTTTGGTGCCA...CTTTGGACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTATATGCTCGAAGTGCTaGCAGATACCCTTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCICSKC*QIPLAE
Trigger: CTCCGCCAAGGGTATCTGCAAGCACTTCGAGCATAT...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TATAAGCCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTATATGCTCGAAGTGCTaGCAGATACCCTTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: YKPTHRIPKRSNEPQNSCICSKC*QIPLAE
Trigger: CTCCGCCAAGGGTATCTGCAAGCACTTCGAGCATAT...ACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGGCTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp GGTTTCTTCCAGACAAGAGCGACGTGCAGCTATCTGCCACACCATAGACTTTATTCCGAAACTTATACTTaGACTTGCCAGTTCGTTTCA +
Preference number: 5 (lower is better)
Translates to: GFFQTRATCSYLPHHRLYSETYT*TCQFVS
Trigger: TGAAACGAACTGGCAAGTCAAAGTATAAGTTTCGGA...ATAAAGTCTATGGTGTGGCAGATAGCTGCACGTCGCTCTTGTCTGGAAGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGAGAGGAGGAGTCAATTaGCAAGGATCCGATGGTGAG +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTRGGVN*QGSDGE
Trigger: CTCACCATCGGATCCTTGCAAATTGACTCCTCCTCT...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCTTGTGCAGGACATTTTaGGCAAGTCTTCCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGLCRTF*ASLPKF
Trigger: AAACTTGGGAAGACTTGCCAAAAATGTCCTGCACAA...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGCTGCTTGGATCTCAGTaGTGCAGGACATTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTLLGSQ*CRTFLA
Trigger: TGCCAAAAATGTCCTGCACAACTGAGATCCAAGCAG...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AAGATGTCTACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTGAGAATGAATGCTGCTaGGATCTCAGTTGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: KMSTIEFISSQNLILSSAENECC*DLSCAG
Trigger: TCCTGCACAACTGAGATCCAAGCAGCATTCATTCTC...AGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATCCAGCTGGGAATCTTaGGCAGATAAACCTTGTTAT +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHESSWES*ADKPCY
Trigger: ATAACAAGGTTTATCTGCCAAAGATTCCCAGCTGGA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATTGTTCTACATCATGTaGAAGAGTCCTGGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHELFYIM*KSPGGE
Trigger: TTCACCACCAGGACTCTTCAACATGATGTAGAACAA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGCGTTTCAGAGTCACCTaGTCCAAAGAGGTTGGTTTG +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTRFRVT*SKEVGL
Trigger: CAAACCAACCTCTTTGGACAAGGTGACTCTGAAACG...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATCTCATTATGTCCATTaGTGTAACCTGGAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHESHYVH*CNLESP
Trigger: AGGAGACTCCAGGTTACACAAATGGACATAATGAGA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCGGACTTTTCGGCAGTTaGATTTCTCATTATGTCCAT +
Preference number: 5 (lower is better)
Translates to: ITQDPVALDFCLTQNSVAGLFGS*ISHYVH
Trigger: ATGGACATAATGAGAAATCAAACTGCCGAAAAGTCC...GGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTATGCAGATTTGTTTCTaGGAGGGACCCTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCMQICF*EGPFQS
Trigger: GGACTGGAAGGGTCCCTCCAAGAAACAAATCTGCAT...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACTGATTCCATGCTATTaGCTTAGGAAAAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHELIPCY*LRKREG
Trigger: TCCCTCTCTTTTCCTAAGCAAATAGCATGGAATCAG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCAGTGGCATTAGACTTTaGTCTCACCCAAAACAGTGT +
Preference number: 5 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGSGIRL*SHPKQC
Trigger: ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACT...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 90 bp TTCTTGATAGAGAGCACCCTCATAATGTTGGAAATATCTTCAGCATaGGAATCACTGCACAAAGGATTGGCTATAATCAGGCATGCCTCT +
Preference number: 5 (lower is better)
Translates to: FLIESTLIMLEISSA*ESLHKGLAIIRHAS
Trigger: AGAGGCATGCCTGATTATAGCCAATCCTTTGTGCAGTGATTCCCATGCTGAAGATATTTCCAACATTATGAGGGTGCTCTCTATCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 90 bp AATAGAGATGTTAGGAAGGTACACAAGCCTGGCACCAAACAGCCTTaGGCGATAAATCCAAGTTTTAATTCAGCAAAGCAGATGATGTTG +
Preference number: 5 (lower is better)
Translates to: NRDVRKVHKPGTKQP*AINPSFNSAKQMML
Trigger: CAACATCATCTGCTTTGCTGAATTAAAACTTGGATTTATCGCCCAAGGCTGTTTGGTGCCAGGCTTGTGTACCTTCCTAACATCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp CTCCAGCCAGAACTTGATCTTGTCATCAGCTGCCATAAACCTCAATCCAAAATATTGTGCAGGACATTTTaGGCAAGTCTTCCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: LQPELDLVISCHKPQSKILCRTF*ASLPKF
Trigger: AAACTTGGGAAGACTTGCCAAAAATGTCCTGCACAA...TATTTTGGATTGAGGTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CAA 90 bp TTCATTCCTTTTATAACAAGCAGTGCTGAAGGGTATGGCACAAAACACAAGATCCTGCTTGGATCTCAGTaGTGCAGGACATTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: FIPFITSSAEGYGTKHKILLGSQ*CRTFLA
Trigger: TGCCAAAAATGTCCTGCACAACTGAGATCCAAGCAG...GATCTTGTGTTTTGTGCCATACCCTTCAGCACTGCTTGTTATAAAAGGAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp AAGATGTCTACGATTGAATTCATCTCCAGCCAGAACTTGATCTTGTCATCAGCTAGCCAGAACTTGATCTaGTCATCAGCTGCCATAAAC +
Preference number: 5 (lower is better)
Translates to: KMSTIEFISSQNLILSSASQNLI*SSAAIN
Trigger: GTTTATGGCAGCTGATGACAAGATCAAGTTCTGGCT...AGCTGATGACAAGATCAAGTTCTGGCTGGAGATGAATTCAATCGTAGACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS-3UTR CAA 90 bp TATAAGCCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTCGTCCTAAGGATGTCTaGGCTACCACATCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: YKPTHRIPKRSNEPQNSCRPKDV*ATTSPN
Trigger: ATTTGGAGATGTGGTAGCCAAGACATCCTTAGGACG...ACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGGCTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGCTGGTGTATTTCCTCTaGTTAGCAAACAGTTCCACC +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTLVYFL*LANSST
Trigger: GGTGGAACTGTTTGCTAACAAGAGGAAATACACCAG...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp CCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTCCAAAGTCCAGCTGGGAATCTTaGGCAGATAAACCTTGTTAT +
Preference number: 5 (lower is better)
Translates to: PTHRIPKRSNEPQNSCPKSSWES*ADKPCY
Trigger: ATAACAAGGTTTATCTGCCAAAGATTCCCAGCTGGA...CTTTGGACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGTCCGTAAAGAGGGACTaGTATTCGATGGCTATCAAC +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTSVKRD*YSMAIN
Trigger: GTTGATAGCCATCGAATACAAGTCCCTCTTTACGGA...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTCCTTGTCCAAAGAGGTaGGTTTGCACCAGTGAAACA +
Preference number: 5 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCPCPKR*VCTSET
Trigger: TGTTTCACTGGTGCAAACCAACCTCTTTGGACAAGG...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TTCATTCCTTTTATAACAAGCAGTGCTGAAGGGTATGGCACAAAACACAAGATCCCTTGTCCAAAGAGGTaGGTTTGCACCAGTGAAACA +
Preference number: 5 (lower is better)
Translates to: FIPFITSSAEGYGTKHKIPCPKR*VCTSET
Trigger: TGTTTCACTGGTGCAAACCAACCTCTTTGGACAAGG...GATCTTGTGTTTTGTGCCATACCCTTCAGCACTGCTTGTTATAAAAGGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCAACTTATACTTTGACTaGCCAGTTCGTTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: YHTRSSGIRLLSHPKQCGNLYFD*PVRFRV
Trigger: GACTCTGAAACGAACTGGCAAGTCAAAGTATAAGTT...GCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAAAACTTATACTTTGACTaGCCAGTTCGTTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHENLYFD*PVRFRV
Trigger: GACTCTGAAACGAACTGGCAAGTCAAAGTATAAGTT...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAATCCGAAACTTATACTTaGACTTGCCAGTTCGTTTCA +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHESETYT*TCQFVS
Trigger: TGAAACGAACTGGCAAGTCAAAGTATAAGTTTCGGA...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGCCAGAGCTTCTTCCTaGAAACTGGGATCCCTTTAT +
Preference number: 5 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCARASS*KLGSLY
Trigger: ATAAAGGGATCCCAGTTTCAAGGAAGAAGCTCTGGC...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS TCA 90 bp GACATTTTTGGCAAGTCTTCCCAAGTTTCATTTCGTAGCTTAGTCTaGAACATGTTCGAGACATCAGTAGACGGAATTGCCAGGTCATTT +
Preference number: 5 (lower is better)
Translates to: DIFGKSSQVSFRSLV*NMFETSVDGIARSF
Trigger: AAATGACCTGGCAATTCCGTCTACTGATGTCTCGAACATGTTTCAGACTAAGCTACGAAATGAAACTTGGGAAGACTTGCCAAAAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000523973.5
CDS-3UTR CAA 90 bp GCTCCTCTTCATCAATTATTCGGTATAAGCCAACACACAGGATTCCAAAAAGATTGTGAATTTCTACCTTaGAGCCAGGGATCACCAGAA +
Preference number: 5 (lower is better)
Translates to: APLHQLFGISQHTGFQKDCEFLP*SQGSPE
Trigger: TTCTGGTGATCCCTGGCTCAAAGGTAGAAATTCACA...ATCTTTTTGGAATCCTGTGTGTTGGCTTATACCGAATAATTGATGAAGAGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp GCTCCTCTTCATCAATTATTCGGTATAAGCCAACACACAGGATTCCAAAAAGATCTGGTGTATTTCCTCTaGTTAGCAAACAGTTCCACC +
Preference number: 5 (lower is better)
Translates to: APLHQLFGISQHTGFQKDLVYFL*LANSST
Trigger: GGTGGAACTGTTTGCTAACAAGAGGAAATACACCAG...ATCTTTTTGGAATCCTGTGTGTTGGCTTATACCGAATAATTGATGAAGAGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp AAGTTAAGAGCACGTGAAGAATATGGGCAGGTCTATAGTGGCTCTGAATATGCAAAAACAATTTCAGTGTaGATCTCTCCTGACTTGTCG +
Preference number: 5 (lower is better)
Translates to: KLRAREEYGQVYSGSEYAKTISV*ISPDLS
Trigger: CGACAAGTCAGGAGAGATCAACACTGAAATTGTTTT...TGCATATTCAGAGCCACTATAGACCTGCCCATATTCTTCACGTGCTCTTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGTCTCATTATGTCCATTaGTGTAACCTGGAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTSHYVH*CNLESP
Trigger: AGGAGACTCCAGGTTACACAAATGGACATAATGAGA...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGTGATCACAAACCTTTaGTTTTCTGGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCVITNL*FSGLSS
Trigger: GGAGCTCAACCCAGAAAACAAAAGGTTTGTGATCAC...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp AGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTGGCCTTCATGAACTGAATGTGTCTCTGTaGTCTGTGATGCTTTATTTA +
Preference number: 5 (lower is better)
Translates to: RSSGIRLLSHPKQCGLHELNVSL*SVMLYL
Trigger: TAAATAAAGCATCACAGACAACAGAGACACATTCAG...TTCATGAAGGCCACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGGTCATCAGAGAGACGTaGGGTCAGAATTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTVIRET*GQNFVF
Trigger: AAAAACAAAATTCTGACCCAACGTCTCTCTGATGAC...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp GGTGAATACAATGTCTCAGTAACTGAATCAATGGTGGGAGGACAATTTGTGTCTGTCATCAGAGAGACGTaGGGTCAGAATTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: GEYNVSVTESMVGGQFVSVIRET*GQNFVF
Trigger: AAAAACAAAATTCTGACCCAACGTCTCTCTGATGAC...AGACACAAATTGTCCTCCCACCATTGATTCAGTTACTGAGACATTGTATTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp TGTTCAAAGTTAGCATCTCAGGAGATGATTTGTAAGCAGCAAGTTAAGAGCACGCTTTTGTTTTCTGGGTaGAGCTCCTCTTCATCAATT +
Preference number: 5 (lower is better)
Translates to: CSKLASQEMICKQQVKSTLLFSG*SSSSSI
Trigger: AATTGATGAAGAGGAGCTCAACCCAGAAAACAAAAG...CGTGCTCTTAACTTGCTGCTTACAAATCATCTCCTGAGATGCTAACTTTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS-3UTR CAA 90 bp TATAAGCCAACACACAGGATTCCAAAAAGATCTAATGAGCCACAGAACAGTTGTAGTGGCATTAGACTTTaGTCTCACCCAAAACAGTGT +
Preference number: 5 (lower is better)
Translates to: YKPTHRIPKRSNEPQNSCSGIRL*SHPKQC
Trigger: ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACT...ACAACTGTTCTGTGGCTCATTAGATCTTTTTGGAATCCTGTGTGTTGGCTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522372.5
CDS-3UTR CAA 90 bp ATTTATCACACAAGATCCAGTGGCATTAGACTTTTGTCTCACCCAAAACAGTGTAAAACAATTTCAGTGTaGATCTCTCCTGACTTGTCG +
Preference number: 5 (lower is better)
Translates to: IYHTRSSGIRLLSHPKQCKTISV*ISPDLS
Trigger: CGACAAGTCAGGAGAGATCAACACTGAAATTGTTTT...ACACTGTTTTGGGTGAGACAAAAGTCTAATGCCACTGGATCTTGTGTGATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS TCA 90 bp AAATTCTGTTTTCTTTATCATTGCTTCTCATGTATCTGGATCATCTaGAGTGATATTAATGAGTGTAGATTTCTGGGATCCCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: KFCFLYHCFSCIWII*SDINECRFLGSQIS
Trigger: GGAGATCTGGGATCCCAGAAATCTACACTCATTAATATCACTTCAGATGATCCAGATACATGAGAAGCAATGATAAAGAAAACAGAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518904.1
CDS GCA 72 bp GACACTGAGGGTGACGGGTCAGAGGAGGAGTCAATTTaGAAGGATCCGATGGTGAGGGTTGCCATGATGGCT +
Preference number: 6 (lower is better)
Translates to: DTEGDGSEEESI*KDPMVRVAMMA
Trigger: AGCCATCATGGCAACCCTCACCATCGGATCCTTGCAAATTGACTCCTCCTCTGACCCGTCACCCTCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS GCA 72 bp GGAATCACTGCACAAAGGATTGGCTATAATCAGGCATaGCTCTGCAGATTCCACCGCAACTCGCCTCAGATC +
Preference number: 6 (lower is better)
Translates to: GITAQRIGYNQA*LCRFHRNSPQI
Trigger: GATCTGAGGCGAGTTGCGGTGGAATCTGCAGAGGCATGCCTGATTATAGCCAATCCTTTGTGCAGTGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS GCA 72 bp CTCGAAGTGCTTGCAGATACCCTTGGCGGAGAATCCTaGCCTGATATACGAGAGGAGATTCCCTTCAGACAT +
Preference number: 6 (lower is better)
Translates to: LEVLADTLGGES*PDIREEIPFRH
Trigger: ATGTCTGAAGGGAATCTCCTCTCGTATATCAGGGCAGGATTCTCCGCCAAGGGTATCTGCAAGCACTTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 72 bp GGGACAAGACAGCACACATGGAGCATTGCTCTATGTTaGCCGCATGGAGGTCTCCAGAATAAAGTGCACATC +
Preference number: 6 (lower is better)
Translates to: GTRQHTWSIALC*PHGGLQNKVHI
Trigger: GATGTGCACTTTATTCTGGAGACCTCCATGCGGCCAACATAGAGCAATGCTCCATGTGTGCTGTCTTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 90 bp CTCCCCAGTGTGAAGAACATGATGAAGGTCCGTCCTAAGGATGTCTaGGCTACCACATCTCCAAATCCAACGGTTGACGTTGTTGCCATG +
Preference number: 6 (lower is better)
Translates to: LPSVKNMMKVRPKDV*ATTSPNPTVDVVAM
Trigger: CATGGCAACAACGTCAACCGTTGGATTTGGAGATGTGGTAGCCAAGACATCCTTAGGACGGACCTTCATCATGTTCTTCACACTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS TCA 72 bp CAAGGGCATTACAAAGTTCCGAAGCCCCATCGGGGCTaGGTGGGCATCTCCAAATACACATGCTACAATATG +
Preference number: 6 (lower is better)
Translates to: QGHYKVPKPHRG*VGISKYTCYNM
Trigger: CATATTGTAGCATGTGTATTTGGAGATGCCCACTCAGCCCCGATGGGGCTTCGGAACTTTGTAATGCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS GCA 72 bp TTCCACCGCAACTCGCCTCAGATCCTCCCACTTCATTaGAGATCCAGAAATGAACGTTGTGTAGGCCAAGTA +
Preference number: 6 (lower is better)
Translates to: FHRNSPQILPLH*RSRNERCVGQV
Trigger: TACTTGGCCTACACAACGTTCATTTCTGGATCTGCAATGAAGTGGGAGGATCTGAGGCGAGTTGCGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS GCA 72 bp AAGAGGGACTTGTATTCGATGGCTATCAACAGGAGGTaGATCTTCAGAAAGCAGAGCCGGGCAACTTCAGGA +
Preference number: 6 (lower is better)
Translates to: KRDLYSMAINRR*IFRKQSRATSG
Trigger: TCCTGAAGTTGCCCGGCTCTGCTTTCTGAAGATGCACCTCCTGTTGATAGCCATCGAATACAAGTCCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS GCA 72 bp GGAGGAGTCAATTTGCAAGGATCCGATGGTGAGGGTTaGCATGATGGCTTCTGTGTCTACCAAAGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: GGVNLQGSDGEG*HDGFCVYQSLV
Trigger: AACCAGACTTTGGTAGACACAGAAGCCATCATGGCAACCCTCACCATCGGATCCTTGCAAATTGACTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 72 bp TCACGAAATTGTCCCTGGAAGTGGAGGCTTCTTACATaGCTCCTAGCGATGGTACCTGATGTGAACAGTTCC +
Preference number: 6 (lower is better)
Translates to: SRNCPWKWRLLT*LLAMVPDVNSS
Trigger: GGAACTGTTCACATCAGGTACCATCGCTAGGAGCCATGTAAGAAGCCTCCACTTCCAGGGACAATTTCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000522417.1
ENST00000523973.5
CDS CCA 72 bp GGCATTACAAAGTTCCGAAGCCCCATCGGGGCTGAGTaGGCATCTCCAAATACACATGCTACAATATGGTTC +
Preference number: 6 (lower is better)
Translates to: GITKFRSPIGAE*ASPNTHATIWF
Trigger: GAACCATATTGTAGCATGTGTATTTGGAGATGCCCACTCAGCCCCGATGGGGCTTCGGAACTTTGTAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 72 bp ACACTATGTCCTTCAGCTCCTTCCTGGTATAGTTGCTaGCTCTCAAGGGCATTACAAAGTTCCGAAGCCCCA +
Preference number: 6 (lower is better)
Translates to: TLCPSAPSWYSC*LSRALQSSEAP
Trigger: TGGGGCTTCGGAACTTTGTAATGCCCTTGAGAGCCAGCAACTATACCAGGAAGGAGCTGAAGGACATAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 72 bp GCCAGTTCGTTTCAGAGTCACCTTGTCCAAAGAGGTTaGTTTGCACCAGTGAAACATCCCACTGCTATCAAG +
Preference number: 6 (lower is better)
Translates to: ASSFQSHLVQRG*FAPVKHPTAIK
Trigger: CTTGATAGCAGTGGGATGTTTCACTGGTGCAAACCAACCTCTTTGGACAAGGTGACTCTGAAACGAACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 72 bp CCCAGGAAAACAATTTCAGTGTTGATCTCTCCTGACTaGTCGCGGAGGAAATTCCTCAGGAAAGCGGTCACA +
Preference number: 6 (lower is better)
Translates to: PRKTISVLISPD*SRRKFLRKAVT
Trigger: TGTGACCGCTTTCCTGAGGAATTTCCTCCGCGACAAGTCAGGAGAGATCAACACTGAAATTGTTTTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 72 bp CGTAGAAAAGGCAGTGCTGAGATGCAGATTTGTTTCTaGGAGGGACCCTTCCAGTCCACCAAGCTGTTCAAT +
Preference number: 6 (lower is better)
Translates to: RRKGSAEMQICF*EGPFQSTKLFN
Trigger: ATTGAACAGCTTGGTGGACTGGAAGGGTCCCTCCAAGAAACAAATCTGCATCTCAGCACTGCCTTTTCTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 90 bp AGTTCCAAAGAAGGAGGGGTTTCTCCCAGGAAAACAATTTCAGTGTaGATCTCTCCTGACTTGTCGCGGAGGAAATTCCTCAGGAAAGCG +
Preference number: 6 (lower is better)
Translates to: SSKEGGVSPRKTISV*ISPDLSRRKFLRKA
Trigger: CGCTTTCCTGAGGAATTTCCTCCGCGACAAGTCAGGAGAGATCAACACTGAAATTGTTTTCCTGGGAGAAACCCCTCCTTCTTTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 90 bp AACAGTGCCCGTAGAAAAGGCAGTGCTGAGATGCAGATTTGTTTCTaGGAGGGACCCTTCCAGTCCACCAAGCTGTTCAATAAAGTGAAT +
Preference number: 6 (lower is better)
Translates to: NSARRKGSAEMQICF*EGPFQSTKLFNKVN
Trigger: ATTCACTTTATTGAACAGCTTGGTGGACTGGAAGGGTCCCTCCAAGAAACAAATCTGCATCTCAGCACTGCCTTTTCTACGGGCACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS TCA 72 bp TTACTGGTCTTGATGGCTCGTAGAATTTGCAAGATTTaGGGGAGTTCTAGCAGGCGCAAGGCTCTTAGGAAC +
Preference number: 6 (lower is better)
Translates to: LLVLMARRICKI*GSSSRRKALRN
Trigger: GTTCCTAAGAGCCTTGCGCCTGCTAGAACTCCCTCAAATCTTGCAAATTCTACGAGCCATCAAGACCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS TCA 72 bp TTCTACATCATGTTGAAGAGTCCTGGTGGTGAAGTTTaGTATGCTCGAAGTGCTTGCAGATACCCTTGGCGG +
Preference number: 6 (lower is better)
Translates to: FYIMLKSPGGEV*YARSACRYPWR
Trigger: CCGCCAAGGGTATCTGCAAGCACTTCGAGCATATCAAACTTCACCACCAGGACTCTTCAACATGATGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS TCA 72 bp AGAGTCACCTTGTCCAAAGAGGTTGGTTTGCACCAGTaGAACATCCCACTGCTATCAAGCTGGTCAGAATCT +
Preference number: 6 (lower is better)
Translates to: RVTLSKEVGLHQ*NIPLLSSWSES
Trigger: AGATTCTGACCAGCTTGATAGCAGTGGGATGTTTCACTGGTGCAAACCAACCTCTTTGGACAAGGTGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS TCA 72 bp CCAACAGGGCAACACTTGCCCCACAAAGGTCTGGGCTaGAAGCAACATTTCTATATGATCACGAAATTGTCC +
Preference number: 6 (lower is better)
Translates to: PTGQHLPHKGLG*KQHFYMITKLS
Trigger: GGACAATTTCGTGATCATATAGAAATGTTGCTTTCAGCCCAGACCTTTGTGGGGCAAGTGTTGCCCTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS GCA 72 bp TTCGTTTCAGAGTCACCTTGTCCAAAGAGGTTGGTTTaGACCAGTGAAACATCCCACTGCTATCAAGCTGGT +
Preference number: 6 (lower is better)
Translates to: FVSESPCPKRLV*TSETSHCYQAG
Trigger: ACCAGCTTGATAGCAGTGGGATGTTTCACTGGTGCAAACCAACCTCTTTGGACAAGGTGACTCTGAAACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 72 bp GTGAAGAACATGATGAAGGTCCGTCCTAAGGATGTCTaGGCTACCACATCTCCAAATCCAACGGTTGACGTT +
Preference number: 6 (lower is better)
Translates to: VKNMMKVRPKDV*ATTSPNPTVDV
Trigger: AACGTCAACCGTTGGATTTGGAGATGTGGTAGCCAAGACATCCTTAGGACGGACCTTCATCATGTTCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS CAA 90 bp GAGTCCACTGAAGAAGGTCACAAAGGAAGAGAGAATGAATGCTGCTaGGATCTCAGTTGTGCAGGACATTTTTGGCAAGTCTTCCCAAGT +
Preference number: 6 (lower is better)
Translates to: ESTEEGHKGRENECC*DLSCAGHFWQVFPS
Trigger: ACTTGGGAAGACTTGCCAAAAATGTCCTGCACAACTGAGATCCAAGCAGCATTCATTCTCTCTTCCTTTGTGACCTTCTTCAGTGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000522417.1
ENST00000523973.5
CDS CAA 90 bp ATAATGTTGGAAATATCTTCAGCATGGGAATCACTGCACAAAGGATaGGCTATAATCAGGCATGCCTCTGCAGATTCCACCGCAACTCGC +
Preference number: 6 (lower is better)
Translates to: IMLEISSAWESLHKG*AIIRHASADSTATR
Trigger: GCGAGTTGCGGTGGAATCTGCAGAGGCATGCCTGATTATAGCCAATCCTTTGTGCAGTGATTCCCATGCTGAAGATATTTCCAACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 90 bp ATTCTCTTTACCGATGGCACTGTGATGTGCTGCCGGCTTCTGCTTTaGCAGCCACAGTTTGTAATTAGCTCAGGAATGAACACATCATCA +
Preference number: 6 (lower is better)
Translates to: ILFTDGTVMCCRLLL*QPQFVISSGMNTSS
Trigger: TGATGATGTGTTCATTCCTGAGCTAATTACAAACTGTGGCTGCAAAAGCAGAAGCCGGCAGCACATCACAGTGCCATCGGTAAAGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 72 bp GTTAGGAAGGTACACAAGCCTGGCACCAAACAGCCTTaGGCGATAAATCCAAGTTTTAATTCAGCAAAGCAG +
Preference number: 6 (lower is better)
Translates to: VRKVHKPGTKQP*AINPSFNSAKQ
Trigger: CTGCTTTGCTGAATTAAAACTTGGATTTATCGCCCAAGGCTGTTTGGTGCCAGGCTTGTGTACCTTCCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 72 bp GAAATATCTTCAGCATGGGAATCACTGCACAAAGGATaGGCTATAATCAGGCATGCCTCTGCAGATTCCACC +
Preference number: 6 (lower is better)
Translates to: EISSAWESLHKG*AIIRHASADST
Trigger: GGTGGAATCTGCAGAGGCATGCCTGATTATAGCCAATCCTTTGTGCAGTGATTCCCATGCTGAAGATATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 72 bp AGTATCAGACCACAGAAACCATCCGTAAAGAGGGACTaGTATTCGATGGCTATCAACAGGAGGTGCATCTTC +
Preference number: 6 (lower is better)
Translates to: SIRPQKPSVKRD*YSMAINRRCIF
Trigger: GAAGATGCACCTCCTGTTGATAGCCATCGAATACAAGTCCCTCTTTACGGATGGTTTCTGTGGTCTGATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS TCA 72 bp GGCAAGTCTTCCCAAGTTTCATTTCGTAGCTTAGTCTaGAACATGTTCGAGACATCAGTAGACGGAATTGCC +
Preference number: 6 (lower is better)
Translates to: GKSSQVSFRSLV*NMFETSVDGIA
Trigger: GGCAATTCCGTCTACTGATGTCTCGAACATGTTTCAGACTAAGCTACGAAATGAAACTTGGGAAGACTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS TCA 72 bp AAGGATCACCAACACTTGCCCCACAAAGGTCTGGGCTaGAAGCAACATTTCTATATGATCACGAAATTGTCC +
Preference number: 6 (lower is better)
Translates to: KDHQHLPHKGLG*KQHFYMITKLS
Trigger: GGACAATTTCGTGATCATATAGAAATGTTGCTTTCAGCCCAGACCTTTGTGGGGCAAGTGTTGGTGATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS GCA 72 bp CCAAAGAGGTTGGTTTGCACCAGTGAAACATCCCACTaGTATCAAGCTGGTCAGAATCTTGTTCTACATCAT +
Preference number: 6 (lower is better)
Translates to: PKRLVCTSETSH*YQAGQNLVLHH
Trigger: ATGATGTAGAACAAGATTCTGACCAGCTTGATAGCAGTGGGATGTTTCACTGGTGCAAACCAACCTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 90 bp AATCCCGCAGCTGTGAACCAGGTACTGAGAATTATTGACAGCAGTTaGGAAAACTTCACTGAGTTACTGGTCTTGATGGCTCGTAGAATT +
Preference number: 6 (lower is better)
Translates to: NPAAVNQVLRIIDSS*ENFTELLVLMARRI
Trigger: AATTCTACGAGCCATCAAGACCAGTAACTCAGTGAAGTTTTCCAAACTGCTGTCAATAATTCTCAGTACCTGGTTCACAGCTGCGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS GCA 72 bp ACTGAAGAAGGTCACAAAGGAAGAGAGAATGAATGCTaGTTGGATCTCAGTTGTGCAGGACATTTTTGGCAA +
Preference number: 6 (lower is better)
Translates to: TEEGHKGRENEC*LDLSCAGHFWQ
Trigger: TTGCCAAAAATGTCCTGCACAACTGAGATCCAAGCAGCATTCATTCTCTCTTCCTTTGTGACCTTCTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000522417.1
ENST00000523973.5
CDS CCA 72 bp AAGAAGGTCACAAAGGAAGAGAGAATGAATGCTGCTTaGATCTCAGTTGTGCAGGACATTTTTGGCAAGTCT +
Preference number: 6 (lower is better)
Translates to: KKVTKEERMNAA*ISVVQDIFGKS
Trigger: AGACTTGCCAAAAATGTCCTGCACAACTGAGATCCAAGCAGCATTCATTCTCTCTTCCTTTGTGACCTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000522417.1
ENST00000523973.5
CDS CCA 72 bp GAGAGCACCCTCATAATGTTGGAAATATCTTCAGCATaGGAATCACTGCACAAAGGATTGGCTATAATCAGG +
Preference number: 6 (lower is better)
Translates to: ESTLIMLEISSA*ESLHKGLAIIR
Trigger: CCTGATTATAGCCAATCCTTTGTGCAGTGATTCCCATGCTGAAGATATTTCCAACATTATGAGGGTGCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CCA 72 bp GCTGAGTGGGCATCTCCAAATACACATGCTACAATATaGTTCCGAAACTTATACTTTGACTTGCCAGTTCGT +
Preference number: 6 (lower is better)
Translates to: AEWASPNTHATI*FRNLYFDLPVR
Trigger: ACGAACTGGCAAGTCAAAGTATAAGTTTCGGAACCATATTGTAGCATGTGTATTTGGAGATGCCCACTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 72 bp GCTGTGAACCAGGTACTGAGAATTATTGACAGCAGTTaGGAAAACTTCACTGAGTTACTGGTCTTGATGGCT +
Preference number: 6 (lower is better)
Translates to: AVNQVLRIIDSS*ENFTELLVLMA
Trigger: AGCCATCAAGACCAGTAACTCAGTGAAGTTTTCCAAACTGCTGTCAATAATTCTCAGTACCTGGTTCACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS GCA 72 bp ATGCTACAATATGGTTCCGAAACTTATACTTTGACTTaGCAGTTCGTTTCAGAGTCACCTTGTCCAAAGAGG +
Preference number: 6 (lower is better)
Translates to: MLQYGSETYTLT*QFVSESPCPKR
Trigger: CCTCTTTGGACAAGGTGACTCTGAAACGAACTGGCAAGTCAAAGTATAAGTTTCGGAACCATATTGTAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 72 bp CATGCTACAATATGGTTCCGAAACTTATACTTTGACTaGCCAGTTCGTTTCAGAGTCACCTTGTCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: HATIWFRNLYFD*PVRFRVTLSKE
Trigger: CTCTTTGGACAAGGTGACTCTGAAACGAACTGGCAAGTCAAAGTATAAGTTTCGGAACCATATTGTAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS GCA 72 bp GTTTCCACAGACCACAATAAACTTCTTTCCTTTGAGTaGTTCATAGGAACTGGTGTATTTCCTCTTGTTAGC +
Preference number: 6 (lower is better)
Translates to: VSTDHNKLLSFE*FIGTGVFPLVS
Trigger: GCTAACAAGAGGAAATACACCAGTTCCTATGAAGCACTCAAAGGAAAGAAGTTTATTGTGGTCTGTGGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 72 bp AGGAAAGCTCATTCCAGCAAAGTCATCAGAGAGACGTaGGGTCAGAATTTTGTTTTTCATGCTATTCAAGAA +
Preference number: 6 (lower is better)
Translates to: RKAHSSKVIRET*GQNFVFHAIQE
Trigger: TTCTTGAATAGCATGAAAAACAAAATTCTGACCCAACGTCTCTCTGATGACTTTGCTGGAATGAGCTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399881.8
ENST00000522372.5
CDS CAA 72 bp AAGAAAGCATTGAAAACCAAATCAATAGGAATGGTTTaGTCTTCATATGATGAACAGCTTCCAACAGGGTCA +
Preference number: 6 (lower is better)
Translates to: KKALKTKSIGMV*SSYDEQLPTGS
Trigger: TGACCCTGTTGGAAGCTGTTCATCATATGAAGACAAAACCATTCCTATTGATTTGGTTTTCAATGCTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399881.8
ENST00000522372.5
ENST00000523973.5
CDS CAA 72 bp AAGAAAGCATTGAAAACCAAATCAATAGGAATGGTTTaGTCTTCATATGATGAACAGCTTCCAACAGGGCAA +
Preference number: 6 (lower is better)
Translates to: KKALKTKSIGMV*SSYDEQLPTGQ
Trigger: TTGCCCTGTTGGAAGCTGTTCATCATATGAAGACAAAACCATTCCTATTGATTTGGTTTTCAATGCTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522417.1
CDS TCA 72 bp TTTCTTTATCATTGCTTCTCATGTATCTGGATCATCTaGAGTGATATTAATGAGTGTAGATTTCTGGGATCC +
Preference number: 6 (lower is better)
Translates to: FLYHCFSCIWII*SDINECRFLGS
Trigger: GGATCCCAGAAATCTACACTCATTAATATCACTTCAGATGATCCAGATACATGAGAAGCAATGATAAAGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518904.1