RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNQ5 (Homo sapiens)

Ensembl gene IDs: ENSG00000185760

Ensembl transcript IDs: ENST00000342056.6, ENST00000355194.8, ENST00000355635.7, ENST00000370392.5, ENST00000370398.6, ENST00000402622.6, ENST00000403813.6, ENST00000414165.6, ENST00000427928.1, ENST00000441538.1, ENST00000445310.2, ENST00000628967.2, ENST00000629977.2

Found 1376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGAGAGCCTGCCCAGTCACGGCAGGTGTCTGGCTTTAGGTCAGTaGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: GESLPSHGRCLALGQ*RGVCVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACACACCCCTCCACTGACCTAAAGCCAGACACCTGCCGTGACTGGGCAGGCTCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 90 bp GGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTaGGGTTTGACCCAGGACAGAGTATGTCCAAGAATCAGTGCTACC +
Preference number: 1 (lower is better)
Translates to: GLRRGPQYIQNSCCQ*GLTQDRVCPRISAT
Trigger: GGTAGCACTGATTCTTGGACATACTCTGTCCTGGGTCAAACCCCACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 90 bp CCCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTaGCTCCCTCCTCTTCCTCTGTTAATAATGGGAGAGAGCCTGCCC +
Preference number: 1 (lower is better)
Translates to: PRTEYVQESVLPESC*LPPLPLLIMGESLP
Trigger: GGGCAGGCTCTCTCCCATTATTAACAGAGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 90 bp TGCCCTTTACATAGGCAGTATTGGCAAGCCTGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATCACAATGGCTGTTCTACTGACCAGT +
Preference number: 1 (lower is better)
Translates to: CPLHRQYWQAWGWRH*RETSPITMAVLLTS
Trigger: ACTGGTCAGTAGAACAGCCATTGTGATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR TCA 90 bp GCGGAGAACTGGTTGACCTGGGGATGGAGGCTGGTTAAGGCCTGGTaGAGTTCAGAAGCAAAATACTGGCAGGGAATGAATAAGGAGTTA +
Preference number: 1 (lower is better)
Translates to: AENWLTWGWRLVKAW*SSEAKYWQGMNKEL
Trigger: TAACTCCTTATTCATTCCCTGCCAGTATTTTGCTTCTGAACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 90 bp TCTCACACTTGCCCTTTACATAGGCAGTATTGGCAAGCCTGGGGTTaGCGCCATTGCAGAGAAACCAGTCCAATCACAATGGCTGTTCTA +
Preference number: 1 (lower is better)
Translates to: SHTCPLHRQYWQAWG*RHCRETSPITMAVL
Trigger: TAGAACAGCCATTGTGATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAAAGGGCAAGTGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 90 bp ATAGCTTCTCACACTTGCCCTTTACATAGGCAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGAGAAACCAGTCCAATCACAATGGCT +
Preference number: 1 (lower is better)
Translates to: IASHTCPLHRQYWQA*GWRHCRETSPITMA
Trigger: AGCCATTGTGATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR TCA 90 bp TGGGGTTTGACCCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTaGAAGTTGCTGCCTCCCTCCTCTTCCTCTGTTAATAATGGGAGA +
Preference number: 1 (lower is better)
Translates to: WGLTQDRVCPRISAT*KLLPPSSSSVNNGR
Trigger: TCTCCCATTATTAACAGAGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGGGTCAAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR TCA 90 bp CTGAATCTTCAGTCGTCAGCAATGCTGGGTGAGCTGTACTGTGTTTaGGACTTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAA +
Preference number: 1 (lower is better)
Translates to: LNLQSSAMLGELYCV*DLTRPKEGSPIHSE
Trigger: TTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAAGTCTCAAACACAGTACAGCTCACCCAGCATTGCTGACGACTGAAGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 90 bp GAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAGGCAGTATTaGCAAGCCTGGGGTTGGCGCCATTGCAGAGAAACCAGTCCAATC +
Preference number: 1 (lower is better)
Translates to: EMRIASHTCPLHRQY*QAWGWRHCRETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 90 bp CCTTCTTCCTTTGAACATCCACTTGATAACCCTGCTCATTCTGCTTaGCTGCTGGAGAAGTACTTCTGGAGGCAGCATTTATGTCTGCCA +
Preference number: 1 (lower is better)
Translates to: PSSFEHPLDNPAHSA*LLEKYFWRQHLCLP
Trigger: TGGCAGACATAAATGCTGCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGGTTATCAAGTGGATGTTCAAAGGAAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR TCA 90 bp GAGTGTGTGAGAGAGGGAAAGAGCACCTTCATTGTTGACCAGAAATaGTCATCCTCCTTACTGTGTTTCAAGATATTCACAGAGCAAGCA +
Preference number: 1 (lower is better)
Translates to: ECVREGKSTFIVDQK*SSSLLCFKIFTEQA
Trigger: TGCTTGCTCTGTGAATATCTTGAAACACAGTAAGGAGGATGATCATTTCTGGTCAACAATGAAGGTGCTCTTTCCCTCTCTCACACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
3UTR TCA 90 bp CTGGTAGATGGAGTGTGTGAGAGAGGGAAAGAGCACCTTCATTGTTaGCCAGAAATGATCATCCTCCTTACTGTGTTTCAAGATATTCAC +
Preference number: 1 (lower is better)
Translates to: LVDGVCERGKEHLHC*PEMIILLTVFQDIH
Trigger: GTGAATATCTTGAAACACAGTAAGGAGGATGATCATTTCTGGTCAACAATGAAGGTGCTCTTTCCCTCTCTCACACACTCCATCTACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
3UTR TCA 90 bp AAGGGATATTTGCAATTAAGTATTAGCTTGATCAACCCTACATGTTaGAGAAGGCAGACACACTTGTACTCAGAAAGCATATGGCTACTC +
Preference number: 1 (lower is better)
Translates to: KGYLQLSISLINPTC*RRQTHLYSESIWLL
Trigger: GAGTAGCCATATGCTTTCTGAGTACAAGTGTGTCTGCCTTCTTCAACATGTAGGGTTGATCAAGCTAATACTTAATTGCAAATATCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 90 bp AAGAAGGCAGACACACTTGTACTCAGAAAGCATATGGCTACTCAGTaGTCAGCTAAATTGTGCTTCAAGACATCATTAAAATTGACCAAT +
Preference number: 1 (lower is better)
Translates to: KKADTLVLRKHMATQ*SAKLCFKTSLKLTN
Trigger: ATTGGTCAATTTTAATGATGTCTTGAAGCACAATTTAGCTGAGCACTGAGTAGCCATATGCTTTCTGAGTACAAGTGTGTCTGCCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR TCA 90 bp AATGGCTGTTCTACTGACCAGTATTTCATACGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATTCTGCCATCAGGCAATATGTTTTCA +
Preference number: 1 (lower is better)
Translates to: NGCSTDQYFIRLCRS*PLIKLILPSGNMFS
Trigger: TGAAAACATATTGCCTGATGGCAGAATCAACTTTATAAGTGGTCAACTTCTACACAAGCGTATGAAATACTGGTCAGTAGAACAGCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAAGCGGAGAACTGGTTaGCCTGGGGATGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVKRRTG*PGDGGW
Trigger: CCAGCCTCCATCCCCAGGTCAACCAGTTCTCCGCTT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCCTGTTGGGGAGGGCTaGGGAGGATTGGTGGAGTTC +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVPVGEG*GGLVEF
Trigger: GAACTCCACCAATCCTCCCCAGCCCTCCCCAACAGG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGCAGGGGAGAGTCAATaGTGGAGAAAGCCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLAGESQ*WRKPVG
Trigger: CCCAACAGGCTTTCTCCATCATTGACTCTCCCCTGC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCCTGGGGATGGAGGCTaGTTAAGGCCTGGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVPGDGG*LRPGEV
Trigger: AACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGGTAAAGCGGAGAACTaGTTGACCTGGGGATGGAGG +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVGKAEN*LTWGWR
Trigger: CCTCCATCCCCAGGTCAACCAGTTCTCCGCTTTACC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAGAATCAGTGCTACCTaGAAGTTGCTGCCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVRISAT*KLLPPS
Trigger: GGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATC +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLWGWRH*RETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACCTGTTGGGGAGGGCTaGGGAGGATTGGTGGAGTTC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESPVGEG*GGLVEF
Trigger: GAACTCCACCAATCCTCCCCAGCCCTCCCCAACAGG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGAGAACTGGTTGACCTaGGGATGGAGGCTGGTTAAG +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLENWLT*GWRLVK
Trigger: CTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGAGAACTGGTTGACCTaGGGATGGAGGCTGGTTAAG +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVENWLT*GWRLVK
Trigger: CTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTGGCAAGCCTGGGGTTaGCGCCATTGCAGAGAAACC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNWQAWG*RHCRET
Trigger: GGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCATTCTGCTTGGCTGCTaGAGAAGTACTTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLILLGC*RSTSGG
Trigger: GCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAAT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTGGCTGAAGTTCTGGTaGCCTAAGATAGCTAGATGG +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVWLKFW*PKIARW
Trigger: CCATCTAGCTATCTTAGGTCACCAGAACTTCAGCCA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGCAGGGGAGAGTCAATaGTGGAGAAAGCCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNAGESQ*WRKPVG
Trigger: CCCAACAGGCTTTCTCCATCATTGACTCTCCCCTGC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLILLG*WRSTSG
Trigger: TCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGTGTGTGTGTGTGTATaGAACATTCTTGCAAGGGGG +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVVCVCV*NILARG
Trigger: CCCCCTTGCAAGAATGTTGCATACACACACACACAC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACCTGGGGATGGAGGCTaGTTAAGGCCTGGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESPGDGG*LRPGEV
Trigger: AACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCCTGGGGATGGAGGCTaGTTAAGGCCTGGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNPGDGG*LRPGEV
Trigger: AACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGGTAAAGCGGAGAACTaGTTGACCTGGGGATGGAGG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESGKAEN*LTWGWR
Trigger: CCTCCATCCCCAGGTCAACCAGTTCTCCGCTTTACC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGTAAAGCGGAGAACTaGTTGACCTGGGGATGGAGG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGKAEN*LTWGWR
Trigger: CCTCCATCCCCAGGTCAACCAGTTCTCCGCTTTACC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVCHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCTGGTTAAGGCCTGGTaGAGTTCAGAAGCAAAATAC +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLVKAW*SSEAKY
Trigger: GTATTTTGCTTCTGAACTTCACCAGGCCTTAACCAG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGATGTCCAAGAATCAGTaGTACCTGAAAGTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVMSKNQ*YLKVAA
Trigger: GGCAGCAACTTTCAGGTAGCACTGATTCTTGGACAT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATTACATAGGCAGTATTaGCAAGCCTGGGGTTGGCGC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLHRQY*QAWGWR
Trigger: GCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTTACATAGGCAGTATTaGCAAGCCTGGGGTTGGCGC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNLHRQY*QAWGWR
Trigger: GCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTTGCCAACTTCCTGGTaGTGTTTCTGGGTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLPTSW*CFWVLF
Trigger: GAAAAGAACCCAGAAACACCACCAGGAAGTTGGCAA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGACTTTGCCAACTTCCTaGTGGTGTTTCTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVTLPTS*WCFWVL
Trigger: AAGAACCCAGAAACACCACCAGGAAGTTGGCAAAGT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCTGGAGAAGTACTTCTaGAGGCAGCATTTATGTCTG +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLEKYF*RQHLCL
Trigger: CAGACATAAATGCTGCCTCCAGAAGTACTTCTCCAG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGAGAACTGGTTGACCTaGGGATGGAGGCTGGTTAAG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNENWLT*GWRLVK
Trigger: CTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGAGAACTGGTTGACCTaGGGATGGAGGCTGGTTAAG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESENWLT*GWRLVK
Trigger: CTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGTCTTAGAATCCAAGTaGGATGCGAAGAGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLVLESK*DAKRKL
Trigger: AAGCTTCCTCTTCGCATCCCACTTGGATTCTAAGAC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTGCCTCACTGGCCCTaGATTTCATTATTTGCACAT +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLPHWP*ISLFAH
Trigger: ATGTGCAAATAATGAAATTCAGGGCCAGTGAGGCAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCAATGGCTGTTCTACTaGCCAGTATTTCATACGCTT +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLQWLFY*PVFHTL
Trigger: AAGCGTATGAAATACTGGTCAGTAGAACAGCCATTG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTTCTCTCCCTCTCATTaGCCTTTGAGGGGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNFSPSH*PLRGKS
Trigger: TGACTTCCCCCTCAAAGGGCAATGAGAGGGAGAGAA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCTGATTTGCAGACTCTaGCAGTACTATCTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLICRL*QYYLAS
Trigger: AGAAGCTAGATAGTACTGGCAGAGTCTGCAAATCAG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACATTCTGCTTGGCTGCTaGAGAAGTACTTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNILLGC*RSTSGG
Trigger: GCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAAT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATGGCTGAAGTTCTGGTaGCCTAAGATAGCTAGATGG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESWLKFW*PKIARW
Trigger: CCATCTAGCTATCTTAGGTCACCAGAACTTCAGCCA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNLILLG*WRSTSG
Trigger: TCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLILLG*WRSTSG
Trigger: TCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTGTATGCAACATTCTTaGAAGGGGGAATCACAACTT +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVCMQHS*KGESQL
Trigger: AAGTTGTGATTCCCCCTTGCAAGAATGTTGCATACA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCCTAAGATAGCTAGATaGGTTTCTAACAAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLPKIAR*VSNKQS
Trigger: TGACTGCTTGTTAGAAACCCATCTAGCTATCTTAGG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGCTGGGGAGGATTGGTaGAGTTCAGGGCCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGAGEDW*SSGPPS
Trigger: AGAAGGAGGCCCTGAACTCCACCAATCCTCCCCAGC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATT +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLRLCRS*PLIKLI
Trigger: AATCAACTTTATAAGTGGTCAACTTCTACACAAGCG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESCHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGCAGGGGAGAGTCAATaGTGGAGAAAGCCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGAGESQ*WRKPVG
Trigger: CCCAACAGGCTTTCTCCATCATTGACTCTCCCCTGC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACTGGTTAAGGCCTGGTaGAGTTCAGAAGCAAAATAC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLVKAW*SSEAKY
Trigger: GTATTTTGCTTCTGAACTTCACCAGGCCTTAACCAG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTAAGTGTTCTGATTTaGAGACTCTGCCAGTACTAT +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLSVLI*RLCQYY
Trigger: ATAGTACTGGCAGAGTCTGCAAATCAGAACACTTAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCACATTACTAAATGAGTaGGTTAATGTCGATGCACCT +
Preference number: 2 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLTLLNE*VNVDAP
Trigger: AGGTGCATCGACATTAACCCACTCATTTAGTAATGT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGACATTACTAAATGAGTaGGTTAATGTCGATGCACCT +
Preference number: 2 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVTLLNE*VNVDAP
Trigger: AGGTGCATCGACATTAACCCACTCATTTAGTAATGT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGA +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGQYWQA*GWRHCR
Trigger: TCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTCCTGGTGGTGTTTCTaGGTTCTTTTCAAGCCTTTC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSWWCF*VLFKPF
Trigger: GAAAGGCTTGAAAAGAACCCAGAAACACCACCAGGA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGTCTTAGAATCCAAGTaGGATGCGAAGAGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESVLESK*DAKRKL
Trigger: AAGCTTCCTCTTCGCATCCCACTTGGATTCTAAGAC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATTGCCTCACTGGCCCTaGATTTCATTATTTGCACAT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLPHWP*ISLFAH
Trigger: ATGTGCAAATAATGAAATTCAGGGCCAGTGAGGCAA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNNGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESNGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATC +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGWGWRH*RETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCTGATTTGCAGACTCTaGCAGTACTATCTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNLICRL*QYYLAS
Trigger: AGAAGCTAGATAGTACTGGCAGAGTCTGCAAATCAG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTGGCAAGCCTGGGGTTaGCGCCATTGCAGAGAAACC +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFWQAWG*RHCRET
Trigger: GGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGCTGGGGAGGATTGGTaGAGTTCAGGGCCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFAGEDW*SSGPPS
Trigger: AGAAGGAGGCCCTGAACTCCACCAATCCTCCCCAGC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATTCTCTCCCTCTCATTaGCCTTTGAGGGGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGFSPSH*PLRGKS
Trigger: TGACTTCCCCCTCAAAGGGCAATGAGAGGGAGAGAA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGA +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFQYWQA*GWRHCR
Trigger: TCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACCTGCTCATTCTGCTTaGCTGCTGGAGAAGTACTTC +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGPAHSA*LLEKYF
Trigger: GAAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTCAGAAGCAAAATACTaGCAGGGAATGAATAAGGAG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSEAKY*QGMNKE
Trigger: CTCCTTATTCATTCCCTGCCAGTATTTTGCTTCTGA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCCTGGGGATGGAGGCTaGTTAAGGCCTGGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFPGDGG*LRPGEV
Trigger: AACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCAATTCTGCTTTAGTTaGTACCTTATTAGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNQFCFS*YLISSC
Trigger: ACAGCTGCTAATAAGGTATCAACTAAAGCAGAATTG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTTGCCTCACTGGCCCTaGATTTCATTATTTGCACAT +
Preference number: 2 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLPHWP*ISLFAH
Trigger: ATGTGCAAATAATGAAATTCAGGGCCAGTGAGGCAA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 2 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATC +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFWGWRH*RETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACACAAGCAGTCAGCATTaGTTGCTTTCTGATAAATAC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCNILARGNHNTSSQH*LLSDKY
Trigger: GTATTTATCAGAAAGCAAGCAATGCTGACTGCTTGT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGAGAACTGGTTGACCTaGGGATGGAGGCTGGTTAAG +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFENWLT*GWRLVK
Trigger: CTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAATTCCTGCTGCCAGTaGGGTTTGACCCAGGACAGA +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFNSCCQ*GLTQDR
Trigger: TCTGTCCTGGGTCAAACCCCACTGGCAGCAGGAATT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGCHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACTGGTTAAGGCCTGGTaGAGTTCAGAAGCAAAATAC +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGLVKAW*SSEAKY
Trigger: GTATTTTGCTTCTGAACTTCACCAGGCCTTAACCAG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCATTCAGAATTCCTGCTaGCAGTGGGGTTTGACCCAG +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFIQNSC*QWGLTQ
Trigger: CTGGGTCAAACCCCACTGGCAGCAGGAATTCTGAAT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTTCAGTCGTCAGCAATaGTGGGTGAGCTGTACTGTG +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFFSRQQ*WVSCTV
Trigger: CACAGTACAGCTCACCCAGCATTGCTGACGACTGAA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATTGCCAACTTCCTGGTaGTGTTTCTGGGTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGLPTSW*CFWVLF
Trigger: GAAAAGAACCCAGAAACACCACCAGGAAGTTGGCAA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACTGGAGAAGTACTTCTaGAGGCAGCATTTATGTCTG +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGLEKYF*RQHLCL
Trigger: CAGACATAAATGCTGCCTCCAGAAGTACTTCTCCAG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCATTCTGCTTGGCTGCTaGAGAAGTACTTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFILLGC*RSTSGG
Trigger: GCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAAT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 2 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCAATTCTGCTTTAGTTaGTACCTTATTAGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHQFCFS*YLISSC
Trigger: ACAGCTGCTAATAAGGTATCAACTAAAGCAGAATTG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGNGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACTGATTTGCAGACTCTaGCAGTACTATCTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGLICRL*QYYLAS
Trigger: AGAAGCTAGATAGTACTGGCAGAGTCTGCAAATCAG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGGCAGCATTTATGTCTaGCAAGGAAACAACTTCCTT +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGGSIYV*QGNNFL
Trigger: AAGGAAGTTGTTTCCTTGGCAGACATAAATGCTGCC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLILLG*WRSTSG
Trigger: TCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTACATTCAGAATTCCTaGTGCCAGTGGGGTTTGACC +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFYIQNS*CQWGLT
Trigger: GGTCAAACCCCACTGGCAGCAGGAATTCTGAATGTA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFCHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 2 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKNGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCACTTTGCCAACTTCCTaGTGGTGTTTCTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFTLPTS*WCFWVL
Trigger: AAGAACCCAGAAACACCACCAGGAAGTTGGCAAAGT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTGGAGAAGTACTTCTaGAGGCAGCATTTATGTCTG +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLEKYF*RQHLCL
Trigger: CAGACATAAATGCTGCCTCCAGAAGTACTTCTCCAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGTCTTAGAATCCAAGTaGGATGCGAAGAGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFVLESK*DAKRKL
Trigger: AAGCTTCCTCTTCGCATCCCACTTGGATTCTAAGAC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGAATCACTGAATCAATaGGAGGTGAGAAAGGCACCT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFESLNQ*EVRKAP
Trigger: AGGTGCCTTTCTCACCTCCCATTGATTCAGTGATTC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATT +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGRLCRS*PLIKLI
Trigger: AATCAACTTTATAAGTGGTCAACTTCTACACAAGCG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCAATGGCTGTTCTACTaGCCAGTATTTCATACGCTT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFQWLFY*PVFHTL
Trigger: AAGCGTATGAAATACTGGTCAGTAGAACAGCCATTG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFNGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTGATTTGCAGACTCTaGCAGTACTATCTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLICRL*QYYLAS
Trigger: AGAAGCTAGATAGTACTGGCAGAGTCTGCAAATCAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATTAAGTGTTCTGATTTaGAGACTCTGCCAGTACTAT +
Preference number: 2 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGLSVLI*RLCQYY
Trigger: ATAGTACTGGCAGAGTCTGCAAATCAGAACACTTAA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 2 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
3UTR-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACAATTCTGCTTTAGTTaGTACCTTATTAGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKQFCFS*YLISSC
Trigger: ACAGCTGCTAATAAGGTATCAACTAAAGCAGAATTG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
3UTR-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTGTAGGTTTTGTTTCTaGATCTTCAGTCGTCAGCAA +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFCRFCF*IFSRQQ
Trigger: TTGCTGACGACTGAAGATTCAGAAACAAAACCTACA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTGTATGCAACATTCTTaGAAGGGGGAATCACAACTT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFCMQHS*KGESQL
Trigger: AAGTTGTGATTCCCCCTTGCAAGAATGTTGCATACA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAACATTACTAAATGAGTaGGTTAATGTCGATGCACCT +
Preference number: 2 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKTLLNE*VNVDAP
Trigger: AGGTGCATCGACATTAACCCACTCATTTAGTAATGT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
3UTR-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 2 (lower is better)
Translates to: GWQIYLEISSHFYYSPILQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
3UTR-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCAATTCTGCTTTAGTTaGTACCTTATTAGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFQFCFS*YLISSC
Trigger: ACAGCTGCTAATAAGGTATCAACTAAAGCAGAATTG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATT +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFRLCRS*PLIKLI
Trigger: AATCAACTTTATAAGTGGTCAACTTCTACACAAGCG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCACAAGCAGTCAGCATTaGTTGCTTTCTGATAAATAC +
Preference number: 2 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFTSSQH*LLSDKY
Trigger: GTATTTATCAGAAAGCAAGCAATGCTGACTGCTTGT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAACATTACTAAATGAGTaGGTTAATGTCGATGCACCT +
Preference number: 2 (lower is better)
Translates to: KQPFLLFPNSALVDTLLATLLNE*VNVDAP
Trigger: AGGTGCATCGACATTAACCCACTCATTTAGTAATGT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
3UTR-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGACATTACTAAATGAGTaGGTTAATGTCGATGCACCT +
Preference number: 2 (lower is better)
Translates to: GWQIYLEISSHFYYSPILTLLNE*VNVDAP
Trigger: AGGTGCATCGACATTAACCCACTCATTTAGTAATGT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGAGGGCTGGGGAGGATaGGTGGAGTTCAGGGCCTCC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESEGWGG*VEFRAS
Trigger: GGAGGCCCTGAACTCCACCAATCCTCCCCAGCCCTC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGAGGGCTGGGGAGGATaGGTGGAGTTCAGGGCCTCC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCNILARGNHNEGWGG*VEFRAS
Trigger: GGAGGCCCTGAACTCCACCAATCCTCCCCAGCCCTC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCTGGGGTTGGCGCCATaGCAGAGAAACCAGTCCAAT +
Preference number: 3 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLGLAP*QRNQSN
Trigger: ATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR TCA 72 bp CAGTCGTCAGCAATGCTGGGTGAGCTGTACTGTGTTTaGGACTTAACGAGGCCTAAGGAGGGGTCCCCAATA +
Preference number: 3 (lower is better)
Translates to: QSSAMLGELYCV*DLTRPKEGSPI
Trigger: TATTGGGGACCCCTCCTTAGGCCTCGTTAAGTCTCAAACACAGTACAGCTCACCCAGCATTGCTGACGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 72 bp GGGTTTGACCCAGGACAGAGTATGTCCAAGAATCAGTaGTACCTGAAAGTTGCTGCCTCCCTCCTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: GFDPGQSMSKNQ*YLKVAASLLFL
Trigger: GAGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGGGTCAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 72 bp CACACTTGCCCTTTACATAGGCAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGAGAAACCAGTCCAATC +
Preference number: 3 (lower is better)
Translates to: HTCPLHRQYWQA*GWRHCRETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAAAGGGCAAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCCCTGCTCATTCTGCTaGGCTGCTGGAGAAGTACTT +
Preference number: 3 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLPCSFC*AAGEVL
Trigger: AAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 72 bp CATAGGCAGTATTGGCAAGCCTGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATCACAATGGCTGTTCTA +
Preference number: 3 (lower is better)
Translates to: HRQYWQAWGWRH*RETSPITMAVL
Trigger: TAGAACAGCCATTGTGATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTGCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 72 bp TGCCCTTTACATAGGCAGTATTGGCAAGCCTGGGGTTaGCGCCATTGCAGAGAAACCAGTCCAATCACAATG +
Preference number: 3 (lower is better)
Translates to: CPLHRQYWQAWG*RHCRETSPITM
Trigger: CATTGTGATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 72 bp ATAGCTTCTCACACTTGCCCTTTACATAGGCAGTATTaGCAAGCCTGGGGTTGGCGCCATTGCAGAGAAACC +
Preference number: 3 (lower is better)
Translates to: IASHTCPLHRQY*QAWGWRHCRET
Trigger: GGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 72 bp AAGGTTGAGAAGCACATTTTAGGTAAAGCGGAGAACTaGTTGACCTGGGGATGGAGGCTGGTTAAGGCCTGG +
Preference number: 3 (lower is better)
Translates to: KVEKHILGKAEN*LTWGWRLVKAW
Trigger: CCAGGCCTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTCCGCTTTACCTAAAATGTGCTTCTCAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 72 bp AGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTaGGGTTTGACCCAGGACAGAGTATGTCCAAGAATC +
Preference number: 3 (lower is better)
Translates to: RGPQYIQNSCCQ*GLTQDRVCPRI
Trigger: GATTCTTGGACATACTCTGTCCTGGGTCAAACCCCACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAAACAACTTCCTTTCTaGAGTCCTCCTGTGGCTAGG +
Preference number: 3 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLKQLPF*SPPVAR
Trigger: CCTAGCCACAGGAGGACTCAAGAAAGGAAGTTGTTT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGGCCTCCTTCTTCCTTaGAACATCCACTTGATAACC +
Preference number: 3 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVGLLLP*NIHLIT
Trigger: GGTTATCAAGTGGATGTTCAAAGGAAGAAGGAGGCC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGGCCTCCTTCTTCCTTaGAACATCCACTTGATAACC +
Preference number: 3 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLGLLLP*NIHLIT
Trigger: GGTTATCAAGTGGATGTTCAAAGGAAGAAGGAGGCC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTGAATGTCATTACGTaGGCTGAAGTTCTGGTGACC +
Preference number: 3 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLNVIT*AEVLVT
Trigger: GGTCACCAGAACTTCAGCCAACGTAATGACATTCAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 72 bp ATCCACTTGATAACCCTGCTCATTCTGCTTGGCTGCTaGAGAAGTACTTCTGGAGGCAGCATTTATGTCTGC +
Preference number: 3 (lower is better)
Translates to: IHLITLLILLGC*RSTSGGSIYVC
Trigger: GCAGACATAAATGCTGCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGGTTATCAAGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 72 bp CTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTaGTTGTCCCTGGGTCTTGGACCTTTGCTGGTCAGA +
Preference number: 3 (lower is better)
Translates to: LTVFQDIHRAST*LSLGLGPLLVR
Trigger: TCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
3UTR-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGAGGGCTGGGGAGGATaGGTGGAGTTCAGGGCCTCC +
Preference number: 3 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFEGWGG*VEFRAS
Trigger: GGAGGCCCTGAACTCCACCAATCCTCCCCAGCCCTC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGGCCTCCTTCTTCCTTaGAACATCCACTTGATAACC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESGLLLP*NIHLIT
Trigger: GGTTATCAAGTGGATGTTCAAAGGAAGAAGGAGGCC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 72 bp CTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTaGCCTTTACATAGGCAGTATTGGCAAGCCTGGGGT +
Preference number: 3 (lower is better)
Translates to: LYVSEMRIASHT*PLHRQYWQAWG
Trigger: ACCCCAGGCTTGCCAATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 72 bp AACATCCACTTGATAACCCTGCTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGAGGCAGCATTTATGTC +
Preference number: 3 (lower is better)
Translates to: NIHLITLLILLG*WRSTSGGSIYV
Trigger: GACATAAATGCTGCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGGTTATCAAGTGGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 72 bp GAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTaGCTCCCTCCTCTTCCTCTGTTAATAATGGGAGAG +
Preference number: 3 (lower is better)
Translates to: EYVQESVLPESC*LPPLPLLIMGE
Trigger: CTCTCCCATTATTAACAGAGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCTAAATGACCTAAACTaGACATATTCATACACCCCA +
Preference number: 3 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLNDLN*TYSYTP
Trigger: TGGGGTGTATGAATATGTCAAGTTTAGGTCATTTAG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAGCAGTCAGCATTGCTaGCTTTCTGATAAATACATT +
Preference number: 3 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVSSQHC*LSDKYI
Trigger: AATGTATTTATCAGAAAGCAAGCAATGCTGACTGCT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATTGAATGTCATTACGTaGGCTGAAGTTCTGGTGACC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLNVIT*AEVLVT
Trigger: GGTCACCAGAACTTCAGCCAACGTAATGACATTCAA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 72 bp ACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTaGTGCCTCCCTCCTCTTCCTCTGTTAATAATGGGA +
Preference number: 3 (lower is better)
Translates to: TEYVQESVLPES*CLPPLPLLIMG
Trigger: TCCCATTATTAACAGAGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 72 bp TTTGAACATCCACTTGATAACCCTGCTCATTCTGCTTaGCTGCTGGAGAAGTACTTCTGGAGGCAGCATTTA +
Preference number: 3 (lower is better)
Translates to: FEHPLDNPAHSA*LLEKYFWRQHL
Trigger: TAAATGCTGCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGGTTATCAAGTGGATGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACCCTGCTCATTCTGCTaGGCTGCTGGAGAAGTACTT +
Preference number: 3 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGPCSFC*AAGEVL
Trigger: AAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACTAAATGACCTAAACTaGACATATTCATACACCCCA +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLNDLN*TYSYTP
Trigger: TGGGGTGTATGAATATGTCAAGTTTAGGTCATTTAG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGGCCTCCTTCTTCCTTaGAACATCCACTTGATAACC +
Preference number: 3 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGGLLLP*NIHLIT
Trigger: GGTTATCAAGTGGATGTTCAAAGGAAGAAGGAGGCC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGAGAGCACCTTCATTGTaGACCAGAAATGATCATCCT +
Preference number: 3 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWRAPSL*TRNDHP
Trigger: AGGATGATCATTTCTGGTCAACAATGAAGGTGCTCT...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
3UTR-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCTAAATGACCTAAACTaGACATATTCATACACCCCA +
Preference number: 3 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLNDLN*TYSYTP
Trigger: TGGGGTGTATGAATATGTCAAGTTTAGGTCATTTAG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR TCA 72 bp AGAGAGGGAAAGAGCACCTTCATTGTTGACCAGAAATaGTCATCCTCCTTACTGTGTTTCAAGATATTCACA +
Preference number: 3 (lower is better)
Translates to: REGKSTFIVDQK*SSSLLCFKIFT
Trigger: TGTGAATATCTTGAAACACAGTAAGGAGGATGATCATTTCTGGTCAACAATGAAGGTGCTCTTTCCCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
3UTR-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTTGAATGTCATTACGTaGGCTGAAGTTCTGGTGACC +
Preference number: 3 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLNVIT*AEVLVT
Trigger: GGTCACCAGAACTTCAGCCAACGTAATGACATTCAA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGTGTATGCAACATTCTaGCAAGGGGGAATCACAACT +
Preference number: 3 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFVYATF*QGGITT
Trigger: AGTTGTGATTCCCCCTTGCAAGAATGTTGCATACAC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAGAAGGCAGACACACTaGTACTCAGAAAGCATATGG +
Preference number: 3 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFRRQTH*YSESIW
Trigger: CCATATGCTTTCTGAGTACAAGTGTGTCTGCCTTCT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGATCAACCCTACATGTaGAAGAAGGCAGACACACTT +
Preference number: 3 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFDQPYM*KKADTL
Trigger: AAGTGTGTCTGCCTTCTTCAACATGTAGGGTTGATC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR TCA 72 bp TCTACTGACCAGTATTTCATACGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATTCTGCCATCAGGCAAT +
Preference number: 3 (lower is better)
Translates to: STDQYFIRLCRS*PLIKLILPSGN
Trigger: ATTGCCTGATGGCAGAATCAACTTTATAAGTGGTCAACTTCTACACAAGCGTATGAAATACTGGTCAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR GCA 72 bp GACACACTTGTACTCAGAAAGCATATGGCTACTCAGTaGTCAGCTAAATTGTGCTTCAAGACATCATTAAAA +
Preference number: 3 (lower is better)
Translates to: DTLVLRKHMATQ*SAKLCFKTSLK
Trigger: TTTTAATGATGTCTTGAAGCACAATTTAGCTGAGCACTGAGTAGCCATATGCTTTCTGAGTACAAGTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR TCA 72 bp TTGCAATTAAGTATTAGCTTGATCAACCCTACATGTTaGAGAAGGCAGACACACTTGTACTCAGAAAGCATA +
Preference number: 3 (lower is better)
Translates to: LQLSISLINPTC*RRQTHLYSESI
Trigger: TATGCTTTCTGAGTACAAGTGTGTCTGCCTTCTTCAACATGTAGGGTTGATCAAGCTAATACTTAATTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR CCA 72 bp TCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTaGGTTAATGTCGATGCACCTTGGAATTTTAGCCAT +
Preference number: 3 (lower is better)
Translates to: SGFLTQGTLLNE*VNVDAPWNFSH
Trigger: ATGGCTAAAATTCCAAGGTGCATCGACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
3UTR-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACTAAATGACCTAAACTaGACATATTCATACACCCCA +
Preference number: 3 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKLNDLN*TYSYTP
Trigger: TGGGGTGTATGAATATGTCAAGTTTAGGTCATTTAG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
3UTR-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCAGTGCTCAGCTAAATaGTGCTTCAAGACATCATTA +
Preference number: 3 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFQCSAK*CFKTSL
Trigger: TAATGATGTCTTGAAGCACAATTTAGCTGAGCACTG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
3UTR-3UTR CAA 90 bp TTATCATTGGAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATGAAAGAGCACCTTCATaGTTGACCAGAAATGATCAT +
Preference number: 3 (lower is better)
Translates to: LSLEDFEITFNRNLSKEDERAPS*LTRNDH
Trigger: ATGATCATTTCTGGTCAACAATGAAGGTGCTCTTTC...ATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTCCAATGATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGCGTGGCCGCGCGGGTaGCCAGCAGTAGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVAWPRG*PAVAGR
Trigger: ACGGCCTGCTACTGCTGGGCACCCGCGCGGCCACGC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTCCGGGCCCCCTGCTTaGCCCGGCGGCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVSGPPA*PGGSPS
Trigger: TGAGGGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTCCGGGCCCCCTGCTTaGCCCGGCGGCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLSGPPA*PGGSPS
Trigger: TGAGGGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCTCATCCGGGCCCCCTaGTTGCCCCGGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLIRAP*LPRRLS
Trigger: GGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGATGAG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCTCATCCGGGCCCCCTaGTTGCCCCGGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLIRAP*LPRRLS
Trigger: GGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGATGAG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCCAGCCAGAGACCTCTaGGCCGGGGGCGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLPARDL*AGGGEA
Trigger: TGCTTCCCCGCCCCCGGCTCAGAGGTCTCTGGCTGG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCGTGGTGGCGGGGCATaGCATCACCACGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVRGGGA*HHHGHR
Trigger: GCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGCAGGCCGTCGCCCCTaGCGGCTGCCGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVAGRRP*RLPSSA
Trigger: TGCTGAACTCGGCAGCCGCCAGGGGCGACGGCCTGC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGCACCCGCCGGTACTTaGCGTTGCGCCGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVAPAGT*RCAGSS
Trigger: AGAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGACTGCCCTCGGCTGTaGTGTCGGTGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVDCPRL*CRCLGT
Trigger: GGTCCCCAAGCACCGACATCACAGCCGAGGGCAGTC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGACTGCCCTCGGCTGTaGTGTCGGTGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLDCPRL*CRCLGT
Trigger: GGTCCCCAAGCACCGACATCACAGCCGAGGGCAGTC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGCGTGGCCGCGCGGGTaGCCAGCAGTAGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNAWPRG*PAVAGR
Trigger: ACGGCCTGCTACTGCTGGGCACCCGCGCGGCCACGC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTCCGGGCCCCCTGCTTaGCCCGGCGGCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSGPPA*PGGSPS
Trigger: TGAGGGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTCCTCTCCTCCCGCGTaGTGGCGGGGCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLSSPPA*WRGMAS
Trigger: TGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACCAGCCAGAGACCTCTaGGCCGGGGGCGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESPARDL*AGGGEA
Trigger: TGCTTCCCCGCCCCCGGCTCAGAGGTCTCTGGCTGG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGCAGGCCGTCGCCCCTaGCGGCTGCCGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNAGRRP*RLPSSA
Trigger: TGCTGAACTCGGCAGCCGCCAGGGGCGACGGCCTGC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCAAAGGCAGCTTCCCTaGCAGGCTGCGGTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVQRQLP*QAAVRH
Trigger: ATGCCGCACCGCAGCCTGCCAGGGAAGCTGCCTTTG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGCACCCGCCGGTACTTaGCGTTGCGCCGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNAPAGT*RCAGSS
Trigger: AGAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTGGCTGAGAACTTTTaGGGCGCAGCGAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLAENF*GAARAG
Trigger: TCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTTGGCTGAGAACTTTTaGGGCGCAGCGAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLAENF*GAARAG
Trigger: TCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAGCCAAAGCGAGGGCTaGGGCAGAGCCTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLSQSEG*GRAFPK
Trigger: CTTCGGAAAGGCTCTGCCTCAGCCCTCGCTTTGGCT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCTCCCCTTCGGTCCATaGGCACCATGCGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLPFGP*APCGGS
Trigger: AGATCCTCCGCATGGTGCGCATGGACCGAAGGGGAG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCCTGTTGGGGAGGGCTaGGGAGGATTGGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLPVGEG*GGLVEF
Trigger: GAACTCCACCAATCCTCCCCAGCCCTCCCCAACAGG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGACTGCCCTCGGCTGTaGTGTCGGTGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNDCPRL*CRCLGT
Trigger: GGTCCCCAAGCACCGACATCACAGCCGAGGGCAGTC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGACTGCCCTCGGCTGTaGTGTCGGTGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESDCPRL*CRCLGT
Trigger: GGTCCCCAAGCACCGACATCACAGCCGAGGGCAGTC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGCTGCCAGTGGGGTTTaGCCCAGGACAGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLAASGV*PRTEYV
Trigger: GACATACTCTGTCCTGGGTCAAACCCCACTGGCAGC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGTAGGGCTGCAGGTGTaGAAGGCCTTCAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVVGLQV*KAFKCG
Trigger: GCCACACTTGAAGGCCTTGCACACCTGCAGCCCTAC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGTAGGGCTGCAGGTGTaGAAGGCCTTCAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLVGLQV*KAFKCG
Trigger: GCCACACTTGAAGGCCTTGCACACCTGCAGCCCTAC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCCTGGCAGGCTGCGGTaGGGCATCAAAAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVPGRLR*GIKSVC
Trigger: ACAGACACTTTTGATGCCGCACCGCAGCCTGCCAGG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCGTGGTGGCGGGGCATaGCATCACCACGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHRGGGA*HHHGHR
Trigger: GCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCGGCTCTTAATACTCTaGCCCCTGGGGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVRLLIL*PLGLAM
Trigger: CATGGCTAGCCCCAGGGGCCAGAGTATTAAGAGCCG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAGCTCTTCTGCACTTTaGTGGGACTGCCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVSSSAL*WDCPRL
Trigger: CAGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTGGCAAGCCTGGGGTTaGCGCCATTGCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLWQAWG*RHCRET
Trigger: GGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGCCAAACACACTGAATaGGGTTGGCAGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVAKHTE*GWQLGS
Trigger: GGAACCCAGCTGCCAACCTCATTCAGTGTGTTTGGC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGCCAAACACACTGAATaGGGTTGGCAGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLAKHTE*GWQLGS
Trigger: GGAACCCAGCTGCCAACCTCATTCAGTGTGTTTGGC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGTCGCCCCTGGCGGCTaGCGAGTTCAGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHVAPGG*RVQQHP
Trigger: AGGGTGCTGCTGAACTCGGCAGCCGCCAGGGGCGAC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGCGTGGCCGCGCGGGTaGCCAGCAGTAGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLAWPRG*PAVAGR
Trigger: ACGGCCTGCTACTGCTGGGCACCCGCGCGGCCACGC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGCGTGGCCGCGCGGGTaGCCAGCAGTAGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGAWPRG*PAVAGR
Trigger: ACGGCCTGCTACTGCTGGGCACCCGCGCGGCCACGC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATCCGGGCCCCCTGCTTaGCCCGGCGGCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSGPPA*PGGSPS
Trigger: TGAGGGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCGTGGTGGCGGGGCATaGCATCACCACGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSRGGGA*HHHGHR
Trigger: GCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTGTGATGTCGGTGCTTaGGGACCTCCTGTCACCTAC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLCDVGA*GPPVTY
Trigger: GTAGGTGACAGGAGGTCCCCAAGCACCGACATCACA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCAGATGCTTGATGGCTaGGAGAGGAGGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVQMLDG*ERRWDL
Trigger: CAGATCCCACCTCCTCTCCCAGCCATCAAGCATCTG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVQYWQA*GWRHCR
Trigger: TCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCCTGGGGATGGAGGCTaGTTAAGGCCTGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLPGDGG*LRPGEV
Trigger: AACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTTGCTGGTTGTCCCTGGGTCTTaGACCTTTGCTGGTCAGACG +
Preference number: 4 (lower is better)
Translates to: QDIHRASTWLSLGLGPLLVVPGS*TFAGQT
Trigger: CGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAAC...CAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTTTGGGGCGTCACTTTaGGAGGGTTTCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVFGASL*EGFSCS
Trigger: GGAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGCACCCGCCGGTACTTaGCGTTGCGCCGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSAPAGT*RCAGSS
Trigger: AGAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCCTCCTGTCACCTACTaGGGCTTGTCGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVPPVTY*GLSALN
Trigger: ATTAAGAGCCGACAAGCCTCAGTAGGTGACAGGAGG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp CAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTTGCTGCCTCCTGTCACCTACTaGGGCTTGTCGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: QDIHRASTWLSLGLGPLLPPVTY*GLSALN
Trigger: ATTAAGAGCCGACAAGCCTCAGTAGGTGACAGGAGG...CAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGACTGCCCTCGGCTGTaGTGTCGGTGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHDCPRL*CRCLGT
Trigger: GGTCCCCAAGCACCGACATCACAGCCGAGGGCAGTC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGGTGAGGTCTTCCACTaGTACATCACACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLGEVFH*YITLAS
Trigger: GGATGCCAGTGTGATGTATCAGTGGAAGACCTCACC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGGCACCTGTGTTGCTTaGCTGTGCATAGTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLGTCVA*LCIVGL
Trigger: TAGCCCTACTATGCACAGTCAAGCAACACAGGTGCC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTTGCTGGGTAGATGGAGTGTGTaGGAGAGGGAAAGAGCACCT +
Preference number: 4 (lower is better)
Translates to: QDIHRASTWLSLGLGPLLGRWSV*ERERAP
Trigger: AGGTGCTCTTTCCCTCTCTCACACACTCCATCTACC...CAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGCAGCGGCCTCATGTaGGCCGGCGGGTTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGSGLM*AGGFQG
Trigger: TCCTTGAAACCCGCCGGCGCACATGAGGCCGCTGCC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGCGTGGCCGCGCGGGTaGCCAGCAGTAGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVAWPRG*PAVAGR
Trigger: ACGGCCTGCTACTGCTGGGCACCCGCGCGGCCACGC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATCCGGGCCCCCTGCTTaGCCCGGCGGCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSGPPA*PGGSPS
Trigger: TGAGGGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCTCATCCGGGCCCCCTaGTTGCCCCGGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLIRAP*LPRRLS
Trigger: GGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGATGAG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCTCCCCTTCGGTCCATaGGCACCATGCGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNLPFGP*APCGGS
Trigger: AGATCCTCCGCATGGTGCGCATGGACCGAAGGGGAG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCCAGTAATTTCCAAGTaGCTCCCCTTCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVPVISK*LPFGPC
Trigger: GCATGGACCGAAGGGGAGGCACTTGGAAATTACTGG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGGCGTCAGAATGAACTaGAGGCCTCTCGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVGVRMN*RPLEML
Trigger: CAACATCTCGAGAGGCCTGCAGTTCATTCTGACGCC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGGCGTCAGAATGAACTaGAGGCCTCTCGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLGVRMN*RPLEML
Trigger: CAACATCTCGAGAGGCCTGCAGTTCATTCTGACGCC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAAATCCGGACCTGTTTaGGGCGTCACTTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVKSGPV*GVTLRG
Trigger: CCCTCTCAAAGTGACGCCCCAAACAGGTCCGGATTT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACGTGGTGGCGGGGCATaGCATCACCACGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGRGGGA*HHHGHR
Trigger: GCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTCCTCTCCTCCCGCGTaGTGGCGGGGCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHSSPPA*WRGMAS
Trigger: TGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGCAGGCCGTCGCCCCTaGCGGCTGCCGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLAGRRP*RLPSSA
Trigger: TGCTGAACTCGGCAGCCGCCAGGGGCGACGGCCTGC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTAGCTCTTCTGCACTTTaGTGGGACTGCCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: CFKIFTEQAPGCPWVLDLSSSAL*WDCPRL
Trigger: CAGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCT...AAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAATCTTGGCTGCCTCTaGAGCCACTTGACTCACTCC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVNLGCL*SHLTHS
Trigger: GGAGTGAGTCAAGTGGCTCCAGAGGCAGCCAAGATT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTACATAGGCAGTATTaGCAAGCCTGGGGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLHRQY*QAWGWR
Trigger: GCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCCTGTTGGGGAGGGCTaGGGAGGATTGGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNPVGEG*GGLVEF
Trigger: GAACTCCACCAATCCTCCCCAGCCCTCCCCAACAGG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCTGGCTTTAGGTCAGTaGAGGGGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLALGQ*RGVCVC
Trigger: ACACACACACACACCCCTCCACTGACCTAAAGCCAG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCCAGCCAGAGACCTCTaGGCCGGGGGCGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVPARDL*AGGGEA
Trigger: TGCTTCCCCGCCCCCGGCTCAGAGGTCTCTGGCTGG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACCAGCCAGAGACCTCTaGGCCGGGGGCGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKPARDL*AGGGEA
Trigger: TGCTTCCCCGCCCCCGGCTCAGAGGTCTCTGGCTGG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGGAAACGGAGACTTCTaGGTGCAGACGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLGNGDF*VQTWQK
Trigger: TTTTTGCCACGTCTGCACTCAGAAGTCTCCGTTTCC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGGACTGCCCTCGGCTGTaGTGTCGGTGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWDCPRL*CRCLGT
Trigger: GGTCCCCAAGCACCGACATCACAGCCGAGGGCAGTC...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGCTGAGCCATCGCTTTaGCTAATTGGCACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVAEPSL*LIGTCV
Trigger: AACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCAACAAGGCAGGTGGTaGCGTCAGAAATGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLQQGRW*RQKCFP
Trigger: AGGAAAGCATTTCTGACGTCACCACCTGCCTTGTTG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGCTGCCAGTGGGGTTTaGCCCAGGACAGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNAASGV*PRTEYV
Trigger: GACATACTCTGTCCTGGGTCAAACCCCACTGGCAGC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGGCAGCGGCCTCATGTaGGCCGGCGGGTTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSGSGLM*AGGFQG
Trigger: TCCTTGAAACCCGCCGGCGCACATGAGGCCGCTGCC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCGTGGCCGCGCGGGTaGCCAGCAGTAGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRAWPRG*PAVAGR
Trigger: ACGGCCTGCTACTGCTGGGCACCCGCGCGGCCACGC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGCGTGGCCGCGCGGGTaGCCAGCAGTAGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFAWPRG*PAVAGR
Trigger: ACGGCCTGCTACTGCTGGGCACCCGCGCGGCCACGC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCGTGGCCGCGCGGGTaGCCAGCAGTAGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILAWPRG*PAVAGR
Trigger: ACGGCCTGCTACTGCTGGGCACCCGCGCGGCCACGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCCGGGCCCCCTGCTTaGCCCGGCGGCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSGPPA*PGGSPS
Trigger: TGAGGGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCTCATCCGGGCCCCCTaGTTGCCCCGGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLIRAP*LPRRLS
Trigger: GGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGATGAG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTCATCCGGGCCCCCTaGTTGCCCCGGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLIRAP*LPRRLS
Trigger: GGAGAGCCGCCGGGGCAAGCAGGGGGCCCGGATGAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGGCTGCTGGCTTGGGTaGCGTATTTATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLGCWLG*RIYLVC
Trigger: GCAAACCAAATAAATACGGCACCCAAGCCAGCAGCC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGCACAGACAAAGATTTaGCCAAGTCCTTCGGCACCA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLAQTKI*PSPSAP
Trigger: TGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACCTGGCAGGCTGCGGTaGGGCATCAAAAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESPGRLR*GIKSVC
Trigger: ACAGACACTTTTGATGCCGCACCGCAGCCTGCCAGG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTCTCTCCCTCTCATTaGCCTTTGAGGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLFSPSH*PLRGKS
Trigger: TGACTTCCCCCTCAAAGGGCAATGAGAGGGAGAGAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACGTGGTGGCGGGGCATaGCATCACCACGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKRGGGA*HHHGHR
Trigger: GCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTCTCCTCCCGCGTGGTaGCGGGGCATGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSPPAW*RGMASP
Trigger: TGGTGATGCCATGCCCCGCCACCACGCGGGAGGAGA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGCAGGCCGTCGCCCCTaGCGGCTGCCGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKAGRRP*RLPSSA
Trigger: TGCTGAACTCGGCAGCCGCCAGGGGCGACGGCCTGC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCGGCTCTTAATACTCTaGCCCCTGGGGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNRLLIL*PLGLAM
Trigger: CATGGCTAGCCCCAGGGGCCAGAGTATTAAGAGCCG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp CCTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGTGATGTCGGTGCTTaGGGACCTCCTGTCACCTAC +
Preference number: 4 (lower is better)
Translates to: PYCVSRYSQSKHLVVPGSCDVGA*GPPVTY
Trigger: GTAGGTGACAGGAGGTCCCCAAGCACCGACATCACA...AGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAGCTCTTCTGCACTTTaGTGGGACTGCCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSSSAL*WDCPRL
Trigger: CAGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAGCTCTTCTGCACTTTaGTGGGACTGCCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESSSSAL*WDCPRL
Trigger: CAGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTGGGGCTGCTGGCTTaGGTGCCGTATTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLGLLA*VPYLFG
Trigger: ACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAGTTGTTGGGGCTGCTaGCTTGGGTGCCGTATTTAT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLSCWGC*LGCRIY
Trigger: ATAAATACGGCACCCAAGCCAGCAGCCCCAACAACT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATGGCAAGCCTGGGGTTaGCGCCATTGCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESWQAWG*RHCRET
Trigger: GGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCCTGCTCATTCTGCTTaGCTGCTGGAGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLPAHSA*LLEKYF
Trigger: GAAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCAGCCAGAGACCTCTaGGCCGGGGGCGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPARDL*AGGGEA
Trigger: TGCTTCCCCGCCCCCGGCTCAGAGGTCTCTGGCTGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACCAGCCAGAGACCTCTaGGCCGGGGGCGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAPARDL*AGGGEA
Trigger: TGCTTCCCCGCCCCCGGCTCAGAGGTCTCTGGCTGG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGCACCCGCCGGTACTTaGCGTTGCGCCGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKAPAGT*RCAGSS
Trigger: AGAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGATCAAGAGGCAACTTaGGGCCAATTTTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLDQEAT*GQFCVL
Trigger: GAGCACACAAAATTGGCCTCAAGTTGCCTCTTGATC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAGCCAAAGCGAGGGCTaGGGCAGAGCCTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHSQSEG*GRAFPK
Trigger: CTTCGGAAAGGCTCTGCCTCAGCCCTCGCTTTGGCT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGGCHC*AIALTN
Trigger: ATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESGGCHC*AIALTN
Trigger: ATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTGGCTGAAGTTCTGGTaGCCTAAGATAGCTAGATGG +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLWLKFW*PKIARW
Trigger: CCATCTAGCTATCTTAGGTCACCAGAACTTCAGCCA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGCAGGGGAGAGTCAATaGTGGAGAAAGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESAGESQ*WRKPVG
Trigger: CCCAACAGGCTTTCTCCATCATTGACTCTCCCCTGC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGAGCTGTACTGTGTTTaGGACTTAACGAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLELYCV*DLTRPK
Trigger: CTTAGGCCTCGTTAAGTCTCAAACACAGTACAGCTC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGATAGAGTGGGGGAGTaGGGGGCGCTCCGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILDRVGE*GALRGA
Trigger: CGCGCCTCGGAGCGCCCCGCACTCCCCCACTCTATC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000342056.6
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGTCGCCCCTGGCGGCTaGCGAGTTCAGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVVAPGG*RVQQHP
Trigger: AGGGTGCTGCTGAACTCGGCAGCCGCCAGGGGCGAC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCTCCCCTTCGGTCCATaGGCACCATGCGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLPFGP*APCGGS
Trigger: AGATCCTCCGCATGGTGCGCATGGACCGAAGGGGAG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGCAGCCACTGTTTTGTaGGGAACCCGAAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLAATVL*GTRKIF
Trigger: AAAGATCTTTCGGGTTCCGCACAAAACAGTGGCTGC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCTCCTGCCTTACAAATaGTCTGAGATGATCGTGACC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLLPYK*SEMIVT
Trigger: GGTCACGATCATCTCAGAGCATTTGTAAGGCAGGAG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTACATTCAGAATTCCTaGTGCCAGTGGGGTTTGACC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLYIQNS*CQWGLT
Trigger: GGTCAAACCCCACTGGCAGCAGGAATTCTGAATGTA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCGTGGTGGCGGGGCATaGCATCACCACGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRRGGGA*HHHGHR
Trigger: GCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCGTGGTGGCGGGGCATaGCATCACCACGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILRGGGA*HHHGHR
Trigger: GCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATCTCCTCCCGCGTGGTaGCGGGGCATGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSPPAW*RGMASP
Trigger: TGGTGATGCCATGCCCCGCCACCACGCGGGAGGAGA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTCTCCTCCCGCGTGGTaGCGGGGCATGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLSPPAW*RGMASP
Trigger: TGGTGATGCCATGCCCCGCCACCACGCGGGAGGAGA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATCCTCTCCTCCCGCGTaGTGGCGGGGCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSSPPA*WRGMAS
Trigger: TGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGCAGGCCGTCGCCCCTaGCGGCTGCCGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFAGRRP*RLPSSA
Trigger: TGCTGAACTCGGCAGCCGCCAGGGGCGACGGCCTGC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGCAGGCCGTCGCCCCTaGCGGCTGCCGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAAGRRP*RLPSSA
Trigger: TGCTGAACTCGGCAGCCGCCAGGGGCGACGGCCTGC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTGTGATGTCGGTGCTTaGGGACCTCCTGTCACCTAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNCDVGA*GPPVTY
Trigger: GTAGGTGACAGGAGGTCCCCAAGCACCGACATCACA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGTAGGCAGTCCAGCTTaGATTCTATGGACTGTACCT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLVGSPA*ILWTVP
Trigger: AGGTACAGTCCATAGAATCCAAGCTGGACTGCCTAC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGTTTGCAATGGTGTTaGTGGCTGCCACTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGLQWC*WLPLLS
Trigger: GCTCAGCAGTGGCAGCCACCAACACCATTGCAAACC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCAAAGGCAGCTTCCCTaGCAGGCTGCGGTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSQRQLP*QAAVRH
Trigger: ATGCCGCACCGCAGCCTGCCAGGGAAGCTGCCTTTG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNQYWQA*GWRHCR
Trigger: TCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCCTGTTGGGGAGGGCTaGGGAGGATTGGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHPVGEG*GGLVEF
Trigger: GAACTCCACCAATCCTCCCCAGCCCTCCCCAACAGG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAGTCGTCAGCAATGCTaGGTGAGCTGTACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLSRQQC*VSCTVF
Trigger: AAACACAGTACAGCTCACCCAGCATTGCTGACGACT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTCACAGAGCAAGCACCTaGTTGTCCCTGGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LTVFQDIHRASTWLSLGLHRAST*LSLGLG
Trigger: TCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTG...AAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCACCCGCCGGTACTTaGCGTTGCGCCGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRAPAGT*RCAGSS
Trigger: AGAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGCACCCGCCGGTACTTaGCGTTGCGCCGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFAPAGT*RCAGSS
Trigger: AGAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTTGGCTGAGAACTTTTaGGGCGCAGCGAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLAENF*GAARAG
Trigger: TCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGTTGGCTGAGAACTTTTaGGGCGCAGCGAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWLAENF*GAARAG
Trigger: TCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAA...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGTGAGGTCTTCCACTaGTACATCACACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGEVFH*YITLAS
Trigger: GGATGCCAGTGTGATGTATCAGTGGAAGACCTCACC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGGTGAGGTCTTCCACTaGTACATCACACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESGEVFH*YITLAS
Trigger: GGATGCCAGTGTGATGTATCAGTGGAAGACCTCACC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTCGGCTCTTCTTATCTaGTGTGATTTGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLSALLI*CDLPFS
Trigger: GGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACCTGTTTTTCAACCTTaGCCACCCGACCGAGCATAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESPVFQP*PPDRAY
Trigger: GTATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCCTGTTTTTCAACCTTaGCCACCCGACCGAGCATAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNPVFQP*PPDRAY
Trigger: GTATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGAGCCAAAGCGAGGGCTaGGGCAGAGCCTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSQSEG*GRAFPK
Trigger: CTTCGGAAAGGCTCTGCCTCAGCCCTCGCTTTGGCT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCATTTGGCGTCAGAATaGACTGCAGGCCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNHLASE*TAGLSR
Trigger: TCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAATG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLVLGEI*LCNLNI
Trigger: AATGTTCAGGTTGCACAGTCAAATCTCACCAAGGAC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGTTCCTCGGTCGACCTaGTCAGGTTTTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESVPRST*SGFAQT
Trigger: TGTCTGTGCAAAACCTGATCAGGTCGACCGAGGAAC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTATTTCAGTTTGACATaGGGCAAGCTGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLYFSLT*GKLRAS
Trigger: AGATGCCCTCAGCTTGCCTCATGTCAAACTGAAATA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTATTTCAGTTTGACATaGGGCAAGCTGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVYFSLT*GKLRAS
Trigger: AGATGCCCTCAGCTTGCCTCATGTCAAACTGAAATA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGAAGCGGAGAACTGGTTaGCCTGGGGATGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSKRRTG*PGDGGW
Trigger: CCAGCCTCCATCCCCAGGTCAACCAGTTCTCCGCTT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAGAATCAGTGCTACCTaGAAGTTGCTGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNRISAT*KLLPPS
Trigger: GGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGGCAGCGGCCTCATGTaGGCCGGCGGGTTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKGSGLM*AGGFQG
Trigger: TCCTTGAAACCCGCCGGCGCACATGAGGCCGCTGCC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGGCAGCGGCCTCATGTaGGCCGGCGGGTTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVGSGLM*AGGFQG
Trigger: TCCTTGAAACCCGCCGGCGCACATGAGGCCGCTGCC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGTCGCCCCTGGCGGCTaGCGAGTTCAGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFVAPGG*RVQQHP
Trigger: AGGGTGCTGCTGAACTCGGCAGCCGCCAGGGGCGAC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGTCGCCCCTGGCGGCTaGCGAGTTCAGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILVAPGG*RVQQHP
Trigger: AGGGTGCTGCTGAACTCGGCAGCCGCCAGGGGCGAC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACCAGTAATTTCCAAGTaGCTCCCCTTCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESPVISK*LPFGPC
Trigger: GCATGGACCGAAGGGGAGGCACTTGGAAATTACTGG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCATATACATCATCAGTaGCAAGGGCTGTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLHIHHQ*QGLCQH
Trigger: ATGCTGACACAGCCCTTGGCACTGATGATGTATATG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGCGTCAGAATGAACTaGAGGCCTCTCGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGVRMN*RPLEML
Trigger: CAACATCTCGAGAGGCCTGCAGTTCATTCTGACGCC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGACCTGATCAGGTTTTaGACAGACAAAGATTTGCCC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVDLIRF*TDKDLP
Trigger: GGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGACCTGATCAGGTTTTaGACAGACAAAGATTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLDLIRF*TDKDLP
Trigger: GGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCCTGGCAGGCTGCGGTaGGGCATCAAAAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHPGRLR*GIKSVC
Trigger: ACAGACACTTTTGATGCCGCACCGCAGCCTGCCAGG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGCTTCCCTGGCAGGCTaGGGTGCGGCATCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSASLAG*GAASKV
Trigger: CACTTTTGATGCCGCACCGCAGCCTGCCAGGGAAGC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESWGWRH*RETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNWGWRH*RETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGTGCTACCTGAAAGTTaGTGCCTCCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESVLPES*CLPPLP
Trigger: AGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCAC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCATGTCCAAGAATCAGTaGTACCTGAAAGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLMSKNQ*YLKVAA
Trigger: GGCAGCAACTTTCAGGTAGCACTGATTCTTGGACAT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAAATCCGGACCTGTTTaGGGCGTCACTTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESKSGPV*GVTLRG
Trigger: CCCTCTCAAAGTGACGCCCCAAACAGGTCCGGATTT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTCTCCTCCCGCGTGGTaGCGGGGCATGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVSPPAW*RGMASP
Trigger: TGGTGATGCCATGCCCCGCCACCACGCGGGAGGAGA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATCTCCTCCCGCGTGGTaGCGGGGCATGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSPPAW*RGMASP
Trigger: TGGTGATGCCATGCCCCGCCACCACGCGGGAGGAGA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATCCTCTCCTCCCGCGTaGTGGCGGGGCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSSPPA*WRGMAS
Trigger: TGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTCCTCTCCTCCCGCGTaGTGGCGGGGCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVSSPPA*WRGMAS
Trigger: TGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAATGACAGTTTTAAGTaGTGGGGTGAGGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLNDSFK*WGEVFH
Trigger: GTGGAAGACCTCACCCCACCACTTAAAACTGTCATT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATTGCAATGGTGTTGGTaGCTGCCACTGCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLQWCW*LPLLSH
Trigger: ATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTATTTGGTTTGCAATaGTGTTGGTGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLFGLQ*CWWLPL
Trigger: CAGTGGCAGCCACCAACACCATTGCAAACCAAATAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAGGGTGCAGAGTTTCTaGCCTGGGCAGATGCTTGAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESRVQSF*PGQMLD
Trigger: ATCAAGCATCTGCCCAGGCCAGAAACTCTGCACCCT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAGTCCTTCGGCACCATaGGACAGACAGACAACAGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSPSAP*DRQTTE
Trigger: CTCTGTTGTCTGTCTGTCCCATGGTGCCGAAGGACT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAATCTTGGCTGCCTCTaGAGCCACTTGACTCACTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESNLGCL*SHLTHS
Trigger: GGAGTGAGTCAAGTGGCTCCAGAGGCAGCCAAGATT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTGGATTCCCTCCATTTaGGGTAAAAATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVWIPSI*GKNLGC
Trigger: GCAGCCAAGATTTTTACCCCAAATGGAGGGAATCCA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACAAAGGCAGCTTCCCTaGCAGGCTGCGGTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGQRQLP*QAAVRH
Trigger: ATGCCGCACCGCAGCCTGCCAGGGAAGCTGCCTTTG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTCCTGGTGGTGTTTCTaGGTTCTTTTCAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVSWWCF*VLFKPF
Trigger: GAAAGGCTTGAAAAGAACCCAGAAACACCACCAGGA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTCCTGGTGGTGTTTCTaGGTTCTTTTCAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLSWWCF*VLFKPF
Trigger: GAAAGGCTTGAAAAGAACCCAGAAACACCACCAGGA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAATTCCTGCTGCCAGTaGGGTTTGACCCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESNSCCQ*GLTQDR
Trigger: TCTGTCCTGGGTCAAACCCCACTGGCAGCAGGAATT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGAAACGGAGACTTCTaGGTGCAGACGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGNGDF*VQTWQK
Trigger: TTTTTGCCACGTCTGCACTCAGAAGTCTCCGTTTCC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCTATGTACCAAGCTGTaGTTAATTCCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVLCTKL*LIPCCE
Trigger: CTCACAGCAAGGAATTAATCACAGCTTGGTACATAG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGACTGCCCTCGGCTGTaGTGTCGGTGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLADCPRL*CRCLGT
Trigger: GGTCCCCAAGCACCGACATCACAGCCGAGGGCAGTC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTGGCTGAGAACTTTTaGGGCGCAGCGAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLLAENF*GAARAG
Trigger: TCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACATCACTGGTTTTGGCTaGGAACTTTTGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNITGFG*ELLRRS
Trigger: GCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGAT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp CTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTATCACTGGTTTTGGCTaGGAACTTTTGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LTVFQDIHRASTWLSLGLITGFG*ELLRRS
Trigger: GCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGAT...AAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCACAACATGTCCAGATaGCCAGCAGAATATTGTTCA +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVHNMSR*PAEYCS
Trigger: TGAACAATATTCTGCTGGTCATCTGGACATGTTGTG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCCCGACCGAGCATACTaGGATCGTCTGTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHPDRAY*DRLWSH
Trigger: ATGAGACCACAGACGATCTCAGTATGCTCGGTCGGG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGCTGAGCCATCGCTTTaGCTAATTGGCACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNAEPSL*LIGTCV
Trigger: AACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGGCHC*AIALTN
Trigger: ATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAAGGCAGGTGGTaGCGTCAGAAATGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESQQGRW*RQKCFP
Trigger: AGGAAAGCATTTCTGACGTCACCACCTGCCTTGTTG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCAATGGCTGTTCTACTaGCCAGTATTTCATACGCTT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVQWLFY*PVFHTL
Trigger: AAGCGTATGAAATACTGGTCAGTAGAACAGCCATTG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTAAGCGGAGAACTGGTTaGCCTGGGGATGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLKRRTG*PGDGGW
Trigger: CCAGCCTCCATCCCCAGGTCAACCAGTTCTCCGCTT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGCTTTGCAAATGGCATaGGAATTGGTCAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLALQMA*ELVNLC
Trigger: GCACAAATTGACCAATTCTCATGCCATTTGCAAAGC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTATAAGCAGTGGTCTCTaGTTTGCTGGTAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: VFQDIHRASTWLSLGLGPISSGL*FAGRWS
Trigger: ACTCCATCTACCAGCAAATCAGAGACCACTGCTTAT...AGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGACGGAGACTTCTGAGTaGAGACGTGGCAAAAATATT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVTETSE*RRGKNI
Trigger: AATATTTTTGCCACGTCTGCACTCAGAAGTCTCCGT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCACGGAGACTTCTGAGTaGAGACGTGGCAAAAATATT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLTETSE*RRGKNI
Trigger: AATATTTTTGCCACGTCTGCACTCAGAAGTCTCCGT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAACCTGAGCCAAGAATaGCGGCAGGAAGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNNLSQE*RQEVQR
Trigger: TCTTTGCACTTCCTGCCGGCATTCTTGGCTCAGGTT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAACCTGAGCCAAGAATaGCGGCAGGAAGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESNLSQE*RQEVQR
Trigger: TCTTTGCACTTCCTGCCGGCATTCTTGGCTCAGGTT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAGATTTCTCATCAGCTaGGTAACTACGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVRFLIS*VTTPNT
Trigger: TGTGTTTGGCGTAGTTACGCAGCTGATGAGAAATCT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAGATTTCTCATCAGCTaGGTAACTACGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLRFLIS*VTTPNT
Trigger: TGTGTTTGGCGTAGTTACGCAGCTGATGAGAAATCT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTGTGGTCTCATGTTCTaGTGTTATTTTCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLCGLMF*CYFLSA
Trigger: AGCCGAGAGAAAATAACAGCAGAACATGAGACCACA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAACCCGAAAGATCTTTaGTATCCACAGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVNPKDL*YPQGFD
Trigger: ATCAAAGCCCTGTGGATAGCAAAGATCTTTCGGGTT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAACCCGAAAGATCTTTaGTATCCACAGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLNPKDL*YPQGFD
Trigger: ATCAAAGCCCTGTGGATAGCAAAGATCTTTCGGGTT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCGTATTTATTTGGTTTaGAATGGTGTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVRIYLV*NGVGGC
Trigger: GCAGCCACCAACACCATTGCAAACCAAATAAATACG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGCACAGACAAAGATTTaGCCAAGTCCTTCGGCACCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESAQTKI*PSPSAP
Trigger: TGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGCTTCCCTGGCAGGCTaGGGTGCGGCATCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGASLAG*GAASKV
Trigger: CACTTTTGATGCCGCACCGCAGCCTGCCAGGGAAGC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLNGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAATTCAGAATTCCTGCTaGCAGTGGGGTTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESIQNSC*QWGLTQ
Trigger: CTGGGTCAAACCCCACTGGCAGCAGGAATTCTGAAT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACATTCAGAATTCCTGCTaGCAGTGGGGTTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNIQNSC*QWGLTQ
Trigger: CTGGGTCAAACCCCACTGGCAGCAGGAATTCTGAAT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATTCAGTCGTCAGCAATaGTGGGTGAGCTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESFSRQQ*WVSCTV
Trigger: CACAGTACAGCTCACCCAGCATTGCTGACGACTGAA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCATATGGCTACTCAGTaGTCAGCTAAATTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVHMATQ*SAKLCF
Trigger: GAAGCACAATTTAGCTGAGCACTGAGTAGCCATATG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTCTCCTCCCGCGTGGTaGCGGGGCATGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILSPPAW*RGMASP
Trigger: TGGTGATGCCATGCCCCGCCACCACGCGGGAGGAGA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCCTCTCCTCCCGCGTaGTGGCGGGGCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSSPPA*WRGMAS
Trigger: TGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTCCTCTCCTCCCGCGTaGTGGCGGGGCATGGCATCA +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSSPPA*WRGMAS
Trigger: TGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGCTTCCAGGTTGCAATaGAAACAGATTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLASRLQ*KQISHQ
Trigger: CTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCAAGGCCTTCAAGTGTaGCTTCCAGGTTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNQGLQV*LPGCNG
Trigger: TCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGCGGCTCTTAATACTCTaGCCCCTGGGGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWRLLIL*PLGLAM
Trigger: CATGGCTAGCCCCAGGGGCCAGAGTATTAAGAGCCG...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCATCTATCACTGGTTTTaGCTGAGAACTTTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLIYHWF*LRTFEA
Trigger: CGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGAT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGTTTGCAATGGTGTTaGTGGCTGCCACTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGLQWC*WLPLLS
Trigger: GCTCAGCAGTGGCAGCCACCAACACCATTGCAAACC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGGTGCCGTATTTATTTaGTTTGCAATGGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLGAVFI*FAMVLV
Trigger: CACCAACACCATTGCAAACCAAATAAATACGGCACC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAGTTGTTGGGGCTGCTaGCTTGGGTGCCGTATTTAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSCWGC*LGCRIY
Trigger: ATAAATACGGCACCCAAGCCAGCAGCCCCAACAACT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCAGATGCTTGATGGCTaGGAGAGGAGGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHQMLDG*ERRWDL
Trigger: CAGATCCCACCTCCTCTCCCAGCCATCAAGCATCTG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCAAAGGCAGCTTCCCTaGCAGGCTGCGGTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVQRQLP*QAAVRH
Trigger: ATGCCGCACCGCAGCCTGCCAGGGAAGCTGCCTTTG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTGGCAAGCCTGGGGTTaGCGCCATTGCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSWQAWG*RHCRET
Trigger: GGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCCTGGGGATGGAGGCTaGTTAAGGCCTGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHPGDGG*LRPGEV
Trigger: AACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGTAAAGCGGAGAACTaGTTGACCTGGGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGKAEN*LTWGWR
Trigger: CCTCCATCCCCAGGTCAACCAGTTCTCCGCTTTACC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTGTCTTGGACCTTTGCTaGTCAGACGTCACAAATACA +
Preference number: 4 (lower is better)
Translates to: VFQDIHRASTWLSLGLGPVLDLC*SDVTNT
Trigger: TGTATTTGTGACGTCTGACCAGCAAAGGTCCAAGAC...AGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CCA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGGCACCTGGTTGTCCCTaGGTCTTGGACCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWAPGCP*VLDLCW
Trigger: CCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGC...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGATCAAGAGGCAACTTaGGGCCAATTTTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNDQEAT*GQFCVL
Trigger: GAGCACACAAAATTGGCCTCAAGTTGCCTCTTGATC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGCCAAACACACTGAATaGGGTTGGCAGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSAKHTE*GWQLGS
Trigger: GGAACCCAGCTGCCAACCTCATTCAGTGTGTTTGGC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGTGAGGTCTTCCACTaGTACATCACACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGEVFH*YITLAS
Trigger: GGATGCCAGTGTGATGTATCAGTGGAAGACCTCACC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCCCGACCGAGCATACTaGGATCGTCTGTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSPDRAY*DRLWSH
Trigger: ATGAGACCACAGACGATCTCAGTATGCTCGGTCGGG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCCTGTTTTTCAACCTTaGCCACCCGACCGAGCATAC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHPVFQP*PPDRAY
Trigger: GTATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAGCCAAAGCGAGGGCTaGGGCAGAGCCTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSQSEG*GRAFPK
Trigger: CTTCGGAAAGGCTCTGCCTCAGCCCTCGCTTTGGCT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAGCCAAAGCGAGGGCTaGGGCAGAGCCTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVSQSEG*GRAFPK
Trigger: CTTCGGAAAGGCTCTGCCTCAGCCCTCGCTTTGGCT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAGAAAGTCTGGGCACTaGACTCATTTGGCGTCAGAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESRKSGH*THLASE
Trigger: TTCTGACGCCAAATGAGTTCAGTGCCCAGACTTTCT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAGAAAGTCTGGGCACTaGACTCATTTGGCGTCAGAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNRKSGH*THLASE
Trigger: TTCTGACGCCAAATGAGTTCAGTGCCCAGACTTTCT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGCAGGGGAGAGTCAATaGTGGAGAAAGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSAGESQ*WRKPVG
Trigger: CCCAACAGGCTTTCTCCATCATTGACTCTCCCCTGC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAAGCGGAGAACTGGTTaGCCTGGGGATGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKKRRTG*PGDGGW
Trigger: CCAGCCTCCATCCCCAGGTCAACCAGTTCTCCGCTT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAGAATCAGTGCTACCTaGAAGTTGCTGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHRISAT*KLLPPS
Trigger: GGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGCTGCCAGTGGGGTTTaGCCCAGGACAGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGAASGV*PRTEYV
Trigger: GACATACTCTGTCCTGGGTCAAACCCCACTGGCAGC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGAGCTGTACTGTGTTTaGGACTTAACGAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNELYCV*DLTRPK
Trigger: CTTAGGCCTCGTTAAGTCTCAAACACAGTACAGCTC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCTCCCCTTCGGTCCATaGGCACCATGCGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLPFGP*APCGGS
Trigger: AGATCCTCCGCATGGTGCGCATGGACCGAAGGGGAG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGTAGGGCTGCAGGTGTaGAAGGCCTTCAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLVGLQV*KAFKCG
Trigger: GCCACACTTGAAGGCCTTGCACACCTGCAGCCCTAC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGTAGGGCTGCAGGTGTaGAAGGCCTTCAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGVGLQV*KAFKCG
Trigger: GCCACACTTGAAGGCCTTGCACACCTGCAGCCCTAC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGCAGCCACTGTTTTGTaGGGAACCCGAAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESAATVL*GTRKIF
Trigger: AAAGATCTTTCGGGTTCCGCACAAAACAGTGGCTGC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGTAAAAATCTTGGCTaGCTCTGGAGCCACTTGACT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGKNLG*LWSHLT
Trigger: AGTCAAGTGGCTCCAGAGGCAGCCAAGATTTTTACC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCCTGGCAGGCTGCGGTaGGGCATCAAAAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLPGRLR*GIKSVC
Trigger: ACAGACACTTTTGATGCCGCACCGCAGCCTGCCAGG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHWGWRH*RETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGATAGCTTCTCACACTTaGCCTTTACATAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVIASHT*PLHRQY
Trigger: ATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTAT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGTGTGTGTGTGTGTATaGAACATTCTTGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESVCVCV*NILARG
Trigger: CCCCCTTGCAAGAATGTTGCATACACACACACACAC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGTGCTACCTGAAAGTTaGTGCCTCCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHVLPES*CLPPLP
Trigger: AGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCAC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGAATTGGTCAATTTGTaGCTGATTTCCTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLELVNL*LISSSL
Trigger: TAGAGAGGAGGAAATCAGGCACAAATTGACCAATTC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGAATTGGTCAATTTGTaGCTGATTTCCTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVELVNL*LISSSL
Trigger: TAGAGAGGAGGAAATCAGGCACAAATTGACCAATTC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTTGGGTCTTGGACCTTTaGTGGTCAGACGTCACAAAT +
Preference number: 4 (lower is better)
Translates to: LTVFQDIHRASTWLSLGLWVLDL*WSDVTN
Trigger: ATTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCA...AAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCGGCTCTTAATACTCTaGCCCCTGGGGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLRLLIL*PLGLAM
Trigger: CATGGCTAGCCCCAGGGGCCAGAGTATTAAGAGCCG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAGCTCTTCTGCACTTTaGTGGGACTGCCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSSSAL*WDCPRL
Trigger: CAGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGTAGGCAGTCCAGCTTaGATTCTATGGACTGTACCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESVGSPA*ILWTVP
Trigger: AGGTACAGTCCATAGAATCCAAGCTGGACTGCCTAC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATCAAAAGGTGGGATCTaGAATGAAGCCAAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESSKGGI*NEAKAR
Trigger: CCTCGCTTTGGCTTCATTCCAGATCCCACCTTTTGA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTTGCAATGGTGTTGGTaGCTGCCACTGCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLQWCW*LPLLSH
Trigger: ATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGGTTTGCAATGGTGTTaGTGGCTGCCACTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSGLQWC*WLPLLS
Trigger: GCTCAGCAGTGGCAGCCACCAACACCATTGCAAACC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCAGATGCTTGATGGCTaGGAGAGGAGGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSQMLDG*ERRWDL
Trigger: CAGATCCCACCTCCTCTCCCAGCCATCAAGCATCTG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAGGGTGCAGAGTTTCTaGCCTGGGCAGATGCTTGAT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHRVQSF*PGQMLD
Trigger: ATCAAGCATCTGCCCAGGCCAGAAACTCTGCACCCT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACAAAGGCAGCTTCCCTaGCAGGCTGCGGTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAQRQLP*QAAVRH
Trigger: ATGCCGCACCGCAGCCTGCCAGGGAAGCTGCCTTTG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCAAAGGCAGCTTCCCTaGCAGGCTGCGGTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILQRQLP*QAAVRH
Trigger: ATGCCGCACCGCAGCCTGCCAGGGAAGCTGCCTTTG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCAAAGGCAGCTTCCCTaGCAGGCTGCGGTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRQRQLP*QAAVRH
Trigger: ATGCCGCACCGCAGCCTGCCAGGGAAGCTGCCTTTG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGCTGGGGAGGATTGGTaGAGTTCAGGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLAGEDW*SSGPPS
Trigger: AGAAGGAGGCCCTGAACTCCACCAATCCTCCCCAGC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACCTGTTGGGGAGGGCTaGGGAGGATTGGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKPVGEG*GGLVEF
Trigger: GAACTCCACCAATCCTCCCCAGCCCTCCCCAACAGG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCCTGGGGATGGAGGCTaGTTAAGGCCTGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSPGDGG*LRPGEV
Trigger: AACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAATTCCTGCTGCCAGTaGGGTTTGACCCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHNSCCQ*GLTQDR
Trigger: TCTGTCCTGGGTCAAACCCCACTGGCAGCAGGAATT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAGTCGTCAGCAATGCTaGGTGAGCTGTACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSRQQC*VSCTVF
Trigger: AAACACAGTACAGCTCACCCAGCATTGCTGACGACT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTTTGGGGCGTCACTTTaGGAGGGTTTCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSFGASL*EGFSCS
Trigger: GGAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAGAAACAACTGCTATTaGAGCGATAAGAACAATGGT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVRNNCY*SDKNNG
Trigger: ACCATTGTTCTTATCGCTTCAATAGCAGTTGTTTCT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGAAACGGAGACTTCTaGGTGCAGACGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGNGDF*VQTWQK
Trigger: TTTTTGCCACGTCTGCACTCAGAAGTCTCCGTTTCC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGCCAAACACACTGAATaGGGTTGGCAGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLAKHTE*GWQLGS
Trigger: GGAACCCAGCTGCCAACCTCATTCAGTGTGTTTGGC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCTGACTCTGCTTCCGTaGGGTGTACATTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLTLLP*GVHSEE
Trigger: CTCTTCAGAATGTACACCTCACGGAAGCAGAGTCAG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342056.6
ENST00000355635.7
ENST00000402622.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATTAAAACTTAGCTTCTaGCTCTGCTTCCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLKLSF*LCFREV
Trigger: CACCTCACGGAAGCAGAGTCAGAAGCTAAGTTTTAA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342056.6
ENST00000355635.7
ENST00000402622.6
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTTGGCTGAGAACTTTTaGGGCGCAGCGAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRLAENF*GAARAG
Trigger: TCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATATCACTGGTTTTGGCTaGGAACTTTTGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHITGFG*ELLRRS
Trigger: GCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGAT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVSSYLM*FALFQE
Trigger: TTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLSSYLM*FALFQE
Trigger: TTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTCGGCTCTTCTTATCTaGTGTGATTTGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSALLI*CDLPFS
Trigger: GGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACCCGACCGAGCATACTaGGATCGTCTGTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGPDRAY*DRLWSH
Trigger: ATGAGACCACAGACGATCTCAGTATGCTCGGTCGGG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGCCAAAGCGAGGGCTaGGGCAGAGCCTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLASQSEG*GRAFPK
Trigger: CTTCGGAAAGGCTCTGCCTCAGCCCTCGCTTTGGCT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAGCCAAAGCGAGGGCTaGGGCAGAGCCTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSQSEG*GRAFPK
Trigger: CTTCGGAAAGGCTCTGCCTCAGCCCTCGCTTTGGCT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCATTTGGCGTCAGAATaGACTGCAGGCCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSHLASE*TAGLSR
Trigger: TCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAATG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGCTGAGCCATCGCTTTaGCTAATTGGCACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHAEPSL*LIGTCV
Trigger: AACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLGGCHC*AIALTN
Trigger: ATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGGGCHC*AIALTN
Trigger: ATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNVLGEI*LCNLNI
Trigger: AATGTTCAGGTTGCACAGTCAAATCTCACCAAGGAC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGTTCCTCGGTCGACCTaGTCAGGTTTTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSVPRST*SGFAQT
Trigger: TGTCTGTGCAAAACCTGATCAGGTCGACCGAGGAAC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCAATTCTGCTTTAGTTaGTACCTTATTAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVQFCFS*YLISSC
Trigger: ACAGCTGCTAATAAGGTATCAACTAAAGCAGAATTG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNCHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCTGGTTAAGGCCTGGTaGAGTTCAGAAGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNLVKAW*SSEAKY
Trigger: GTATTTTGCTTCTGAACTTCACCAGGCCTTAACCAG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGAAGCGGAGAACTGGTTaGCCTGGGGATGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILKRRTG*PGDGGW
Trigger: CCAGCCTCCATCCCCAGGTCAACCAGTTCTCCGCTT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAAGCGGAGAACTGGTTaGCCTGGGGATGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFKRRTG*PGDGGW
Trigger: CCAGCCTCCATCCCCAGGTCAACCAGTTCTCCGCTT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGCTGCCAGTGGGGTTTaGCCCAGGACAGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVAASGV*PRTEYV
Trigger: GACATACTCTGTCCTGGGTCAAACCCCACTGGCAGC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGCTGCCAGTGGGGTTTaGCCCAGGACAGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKAASGV*PRTEYV
Trigger: GACATACTCTGTCCTGGGTCAAACCCCACTGGCAGC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGAGGCCAATTTTGTGTaGTCAGGGATGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNEANFV*SGMVEN
Trigger: GTTTTCTACCATCCCTGAGCACACAAAATTGGCCTC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCTCCCCTTCGGTCCATaGGCACCATGCGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRLPFGP*APCGGS
Trigger: AGATCCTCCGCATGGTGCGCATGGACCGAAGGGGAG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACTCCCCTTCGGTCCATaGGCACCATGCGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLALPFGP*APCGGS
Trigger: AGATCCTCCGCATGGTGCGCATGGACCGAAGGGGAG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCTCCCCTTCGGTCCATaGGCACCATGCGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLPFGP*APCGGS
Trigger: AGATCCTCCGCATGGTGCGCATGGACCGAAGGGGAG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGTAGGGCTGCAGGTGTaGAAGGCCTTCAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKVGLQV*KAFKCG
Trigger: GCCACACTTGAAGGCCTTGCACACCTGCAGCCCTAC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACATATACATCATCAGTaGCAAGGGCTGTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESHIHHQ*QGLCQH
Trigger: ATGCTGACACAGCCCTTGGCACTGATGATGTATATG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACCTGGCAGGCTGCGGTaGGGCATCAAAAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKPGRLR*GIKSVC
Trigger: ACAGACACTTTTGATGCCGCACCGCAGCCTGCCAGG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCTTCCCTGGCAGGCTaGGGTGCGGCATCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILASLAG*GAASKV
Trigger: CACTTTTGATGCCGCACCGCAGCCTGCCAGGGAAGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTCCCTGGCAGGCTaGGGTGCGGCATCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRASLAG*GAASKV
Trigger: CACTTTTGATGCCGCACCGCAGCCTGCCAGGGAAGC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGCTTCCCTGGCAGGCTaGGGTGCGGCATCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAASLAG*GAASKV
Trigger: CACTTTTGATGCCGCACCGCAGCCTGCCAGGGAAGC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCACAAGCAGTCAGCATTaGTTGCTTTCTGATAAATAC +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLTSSQH*LLSDKY
Trigger: GTATTTATCAGAAAGCAAGCAATGCTGACTGCTTGT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATATTCAGAATTCCTGCTaGCAGTGGGGTTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHIQNSC*QWGLTQ
Trigger: CTGGGTCAAACCCCACTGGCAGCAGGAATTCTGAAT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTCATCCTTACAGTTTTaGTTTGCAAATGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVSSLQF*FANGMR
Trigger: TCTCATGCCATTTGCAAAGCAAAACTGTAAGGATGA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTCATCCTTACAGTTTTaGTTTGCAAATGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLSSLQF*FANGMR
Trigger: TCTCATGCCATTTGCAAAGCAAAACTGTAAGGATGA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATGTGATGTCGGTGCTTaGGGACCTCCTGTCACCTAC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGCDVGA*GPPVTY
Trigger: GTAGGTGACAGGAGGTCCCCAAGCACCGACATCACA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAATGACAGTTTTAAGTaGTGGGGTGAGGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESNDSFK*WGEVFH
Trigger: GTGGAAGACCTCACCCCACCACTTAAAACTGTCATT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAATGACAGTTTTAAGTaGTGGGGTGAGGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNNDSFK*WGEVFH
Trigger: GTGGAAGACCTCACCCCACCACTTAAAACTGTCATT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGGTTTGCAATGGTGTTaGTGGCTGCCACTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGGLQWC*WLPLLS
Trigger: GCTCAGCAGTGGCAGCCACCAACACCATTGCAAACC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGGTTTGCAATGGTGTTaGTGGCTGCCACTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLGLQWC*WLPLLS
Trigger: GCTCAGCAGTGGCAGCCACCAACACCATTGCAAACC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTTGGGGCTGCTGGCTTaGGTGCCGTATTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLGLLA*VPYLFG
Trigger: ACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCAGATGCTTGATGGCTaGGAGAGGAGGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLQMLDG*ERRWDL
Trigger: CAGATCCCACCTCCTCTCCCAGCCATCAAGCATCTG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCCTGAACATTTTCCTTaGAGGCAACAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHPEHFP*RQQGRW
Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAATGTTCAGG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGAGTCCTTCGGCACCATaGGACAGACAGACAACAGAG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSPSAP*DRQTTE
Trigger: CTCTGTTGTCTGTCTGTCCCATGGTGCCGAAGGACT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTGGATTCCCTCCATTTaGGGTAAAAATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNWIPSI*GKNLGC
Trigger: GCAGCCAAGATTTTTACCCCAAATGGAGGGAATCCA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATGGCAAGCCTGGGGTTaGCGCCATTGCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKWQAWG*RHCRET
Trigger: GGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLQYWQA*GWRHCR
Trigger: TCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTTACATAGGCAGTATTaGCAAGCCTGGGGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLHRQY*QAWGWR
Trigger: GCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATCCTGGTGGTGTTTCTaGGTTCTTTTCAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESSWWCF*VLFKPF
Trigger: GAAAGGCTTGAAAAGAACCCAGAAACACCACCAGGA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACACTTTGCCAACTTCCTaGTGGTGTTTCTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNTLPTS*WCFWVL
Trigger: AAGAACCCAGAAACACCACCAGGAAGTTGGCAAAGT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCTGGAGAAGTACTTCTaGAGGCAGCATTTATGTCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNLEKYF*RQHLCL
Trigger: CAGACATAAATGCTGCCTCCAGAAGTACTTCTCCAG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATATTCTGCTTGGCTGCTaGAGAAGTACTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHILLGC*RSTSGG
Trigger: GCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAAT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGCTGGGGAGGATTGGTaGAGTTCAGGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKAGEDW*SSGPPS
Trigger: AGAAGGAGGCCCTGAACTCCACCAATCCTCCCCAGC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACCTGTTGGGGAGGGCTaGGGAGGATTGGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAPVGEG*GGLVEF
Trigger: GAACTCCACCAATCCTCCCCAGCCCTCCCCAACAGG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCTGTTGGGGAGGGCTaGGGAGGATTGGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPVGEG*GGLVEF
Trigger: GAACTCCACCAATCCTCCCCAGCCCTCCCCAACAGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGAGAACTGGTTGACCTaGGGATGGAGGCTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSENWLT*GWRLVK
Trigger: CTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGGTAAAGCGGAGAACTaGTTGACCTGGGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLGKAEN*LTWGWR
Trigger: CCTCCATCCCCAGGTCAACCAGTTCTCCGCTTTACC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATTTGGGGCGTCACTTTaGGAGGGTTTCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGFGASL*EGFSCS
Trigger: GGAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGGAAACGGAGACTTCTaGGTGCAGACGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSGNGDF*VQTWQK
Trigger: TTTTTGCCACGTCTGCACTCAGAAGTCTCCGTTTCC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACTATGTACCAAGCTGTaGTTAATTCCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLCTKL*LIPCCE
Trigger: CTCACAGCAAGGAATTAATCACAGCTTGGTACATAG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACCTCCTGTCACCTACTaGGGCTTGTCGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGPPVTY*GLSALN
Trigger: ATTAAGAGCCGACAAGCCTCAGTAGGTGACAGGAGG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGATCACTGGTTTTGGCTaGGAACTTTTGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSITGFG*ELLRRS
Trigger: GCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGAT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCACAACATGTCCAGATaGCCAGCAGAATATTGTTCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNHNMSR*PAEYCS
Trigger: TGAACAATATTCTGCTGGTCATCTGGACATGTTGTG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCCCGACCGAGCATACTaGGATCGTCTGTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVPDRAY*DRLWSH
Trigger: ATGAGACCACAGACGATCTCAGTATGCTCGGTCGGG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACCTGTTTTTCAACCTTaGCCACCCGACCGAGCATAC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGPVFQP*PPDRAY
Trigger: GTATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCATTTGGCGTCAGAATaGACTGCAGGCCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLHLASE*TAGLSR
Trigger: TCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAATG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGGCACCTGTGTTGCTTaGCTGTGCATAGTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGGTCVA*LCIVGL
Trigger: TAGCCCTACTATGCACAGTCAAGCAACACAGGTGCC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGCTGAGCCATCGCTTTaGCTAATTGGCACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSAEPSL*LIGTCV
Trigger: AACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVGGCHC*AIALTN
Trigger: ATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGTTCCTCGGTCGACCTaGTCAGGTTTTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLVPRST*SGFAQT
Trigger: TGTCTGTGCAAAACCTGATCAGGTCGACCGAGGAAC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGCCTTACAAATGCTCTaGGATGATCGTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHALQML*DDRDLP
Trigger: TGGAAGGTCACGATCATCTCAGAGCATTTGTAAGGC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCAATGGCTGTTCTACTaGCCAGTATTTCATACGCTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNQWLFY*PVFHTL
Trigger: AAGCGTATGAAATACTGGTCAGTAGAACAGCCATTG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTGGCTGAAGTTCTGGTaGCCTAAGATAGCTAGATGG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHWLKFW*PKIARW
Trigger: CCATCTAGCTATCTTAGGTCACCAGAACTTCAGCCA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGCAGGGGAGAGTCAATaGTGGAGAAAGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKAGESQ*WRKPVG
Trigger: CCCAACAGGCTTTCTCCATCATTGACTCTCCCCTGC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTGCCAGTGGGGTTTaGCCCAGGACAGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRAASGV*PRTEYV
Trigger: GACATACTCTGTCCTGGGTCAAACCCCACTGGCAGC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGCTTTGCAAATGGCATaGGAATTGGTCAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESALQMA*ELVNLC
Trigger: GCACAAATTGACCAATTCTCATGCCATTTGCAAAGC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGCTTTGCAAATGGCATaGGAATTGGTCAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNALQMA*ELVNLC
Trigger: GCACAAATTGACCAATTCTCATGCCATTTGCAAAGC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTTAAAACTTAGCTTCTaGCTGCTTGATGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNLKLSF*LLDASP
Trigger: AGGGGAAGCATCAAGCAGTCAGAAGCTAAGTTTTAA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355194.8
ENST00000370398.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCCAGTAATTTCCAAGTaGCTCCCCTTCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLPVISK*LPFGPC
Trigger: GCATGGACCGAAGGGGAGGCACTTGGAAATTACTGG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAGATTTCTCATCAGCTaGGTAACTACGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESRFLIS*VTTPNT
Trigger: TGTGTTTGGCGTAGTTACGCAGCTGATGAGAAATCT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGTAGGGCTGCAGGTGTaGAAGGCCTTCAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFVGLQV*KAFKCG
Trigger: GCCACACTTGAAGGCCTTGCACACCTGCAGCCCTAC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGTAGGGCTGCAGGTGTaGAAGGCCTTCAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRVGLQV*KAFKCG
Trigger: GCCACACTTGAAGGCCTTGCACACCTGCAGCCCTAC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACGTATTTATTTGGTTTaGAATGGTGTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESRIYLV*NGVGGC
Trigger: GCAGCCACCAACACCATTGCAAACCAAATAAATACG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGGCTGCTGGCTTGGGTaGCGTATTTATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSGCWLG*RIYLVC
Trigger: GCAAACCAAATAAATACGGCACCCAAGCCAGCAGCC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGTAAAAATCTTGGCTaGCTCTGGAGCCACTTGACT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGKNLG*LWSHLT
Trigger: AGTCAAGTGGCTCCAGAGGCAGCCAAGATTTTTACC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCTGGCAGGCTGCGGTaGGGCATCAAAAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPGRLR*GIKSVC
Trigger: ACAGACACTTTTGATGCCGCACCGCAGCCTGCCAGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCCTGGCAGGCTGCGGTaGGGCATCAAAAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRPGRLR*GIKSVC
Trigger: ACAGACACTTTTGATGCCGCACCGCAGCCTGCCAGG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCTCCTGCCTTACAAATaGTCTGAGATGATCGTGACC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLLPYK*SEMIVT
Trigger: GGTCACGATCATCTCAGAGCATTTGTAAGGCAGGAG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLWGWRH*RETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACTGATTTGCAGACTCTaGCAGTACTATCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESLICRL*QYYLAS
Trigger: AGAAGCTAGATAGTACTGGCAGAGTCTGCAAATCAG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGGCAGCATTTATGTCTaGCAAGGAAACAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESGSIYV*QGNNFL
Trigger: AAGGAAGTTGTTTCCTTGGCAGACATAAATGCTGCC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGTGTGTGTGTGTGTATaGAACATTCTTGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHVCVCV*NILARG
Trigger: CCCCCTTGCAAGAATGTTGCATACACACACACACAC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGTGCTACCTGAAAGTTaGTGCCTCCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGVLPES*CLPPLP
Trigger: AGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCAC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCATATGGCTACTCAGTaGTCAGCTAAATTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNHMATQ*SAKLCF
Trigger: GAAGCACAATTTAGCTGAGCACTGAGTAGCCATATG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTAAATCCGGACCTGTTTaGGGCGTCACTTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLKSGPV*GVTLRG
Trigger: CCCTCTCAAAGTGACGCCCCAAACAGGTCCGGATTT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGCTTCCAGGTTGCAATaGAAACAGATTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESASRLQ*KQISHQ
Trigger: CTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCAAGGCCTTCAAGTGTaGCTTCCAGGTTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSQGLQV*LPGCNG
Trigger: TCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCGGCTCTTAATACTCTaGCCCCTGGGGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFRLLIL*PLGLAM
Trigger: CATGGCTAGCCCCAGGGGCCAGAGTATTAAGAGCCG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCGGCTCTTAATACTCTaGCCCCTGGGGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRRLLIL*PLGLAM
Trigger: CATGGCTAGCCCCAGGGGCCAGAGTATTAAGAGCCG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACGGCTCTTAATACTCTaGCCCCTGGGGCTAGCCATG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARLLIL*PLGLAM
Trigger: CATGGCTAGCCCCAGGGGCCAGAGTATTAAGAGCCG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATGTGATGTCGGTGCTTaGGGACCTCCTGTCACCTAC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKCDVGA*GPPVTY
Trigger: GTAGGTGACAGGAGGTCCCCAAGCACCGACATCACA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGCTCTTCTGCACTTTaGTGGGACTGCCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLASSSAL*WDCPRL
Trigger: CAGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAGCTCTTCTGCACTTTaGTGGGACTGCCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSSSAL*WDCPRL
Trigger: CAGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAATCTATCACTGGTTTTaGCTGAGAACTTTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESIYHWF*LRTFEA
Trigger: CGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGAT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCACTGATACATCACACTaGCATCCTTTTTCATCATAT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLTDTSH*HPFSSY
Trigger: ATATGATGAAAAAGGATGCCAGTGTGATGTATCAGT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATTGCAATGGTGTTGGTaGCTGCCACTGCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGLQWCW*LPLLSH
Trigger: ATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTTGGGGCTGCTGGCTTaGGTGCCGTATTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLGLLA*VPYLFG
Trigger: ACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGAGTTGTTGGGGCTGCTaGCTTGGGTGCCGTATTTAT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSCWGC*LGCRIY
Trigger: ATAAATACGGCACCCAAGCCAGCAGCCCCAACAACT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCAGATGCTTGATGGCTaGGAGAGGAGGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVQMLDG*ERRWDL
Trigger: CAGATCCCACCTCCTCTCCCAGCCATCAAGCATCTG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAGGGTGCAGAGTTTCTaGCCTGGGCAGATGCTTGAT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGRVQSF*PGQMLD
Trigger: ATCAAGCATCTGCCCAGGCCAGAAACTCTGCACCCT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTAGGGTGCAGAGTTTCTaGCCTGGGCAGATGCTTGAT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLRVQSF*PGQMLD
Trigger: ATCAAGCATCTGCCCAGGCCAGAAACTCTGCACCCT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCCTGAACATTTTCCTTaGAGGCAACAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSPEHFP*RQQGRW
Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAATGTTCAGG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAGTCCTTCGGCACCATaGGACAGACAGACAACAGAG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSPSAP*DRQTTE
Trigger: CTCTGTTGTCTGTCTGTCCCATGGTGCCGAAGGACT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTGGCAAGCCTGGGGTTaGCGCCATTGCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILWQAWG*RHCRET
Trigger: GGTTTCTCTGCAATGGCGCCAACCCCAGGCTTGCCA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKQYWQA*GWRHCR
Trigger: TCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGATTCTGCTTGGCTGCTaGAGAAGTACTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSILLGC*RSTSGG
Trigger: GCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAAT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCCTGCTCATTCTGCTTaGCTGCTGGAGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSPAHSA*LLEKYF
Trigger: GAAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCTGGGGAGGATTGGTaGAGTTCAGGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILAGEDW*SSGPPS
Trigger: AGAAGGAGGCCCTGAACTCCACCAATCCTCCCCAGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGAGAACTGGTTGACCTaGGGATGGAGGCTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGENWLT*GWRLVK
Trigger: CTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGGTAAAGCGGAGAACTaGTTGACCTGGGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKGKAEN*LTWGWR
Trigger: CCTCCATCCCCAGGTCAACCAGTTCTCCGCTTTACC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAGCTTGAAATGGATATaGTGTTCCCGATTTATTTGT +
Preference number: 4 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVSLKWI*CSRFIC
Trigger: ACAAATAAATCGGGAACACCATATCCATTTCAAGCT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAATGATAGCTTGAAATaGATATGGTGTTCCCGATTT +
Preference number: 4 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLNDSLK*IWCSRF
Trigger: AAATCGGGAACACCATATCCATTTCAAGCTATCATT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGGAAACGGAGACTTCTaGGTGCAGACGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLGNGDF*VQTWQK
Trigger: TTTTTGCCACGTCTGCACTCAGAAGTCTCCGTTTCC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGGAAACGGAGACTTCTaGGTGCAGACGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGGNGDF*VQTWQK
Trigger: TTTTTGCCACGTCTGCACTCAGAAGTCTCCGTTTCC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCCAAACACACTGAATaGGGTTGGCAGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILAKHTE*GWQLGS
Trigger: GGAACCCAGCTGCCAACCTCATTCAGTGTGTTTGGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGCCAAACACACTGAATaGGGTTGGCAGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFAKHTE*GWQLGS
Trigger: GGAACCCAGCTGCCAACCTCATTCAGTGTGTTTGGC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGCCAAACACACTGAATaGGGTTGGCAGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAAKHTE*GWQLGS
Trigger: GGAACCCAGCTGCCAACCTCATTCAGTGTGTTTGGC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCCTCCTGTCACCTACTaGGGCTTGTCGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVPPVTY*GLSALN
Trigger: ATTAAGAGCCGACAAGCCTCAGTAGGTGACAGGAGG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTATCACTGGTTTTGGCTaGGAACTTTTGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLITGFG*ELLRRS
Trigger: GCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGAT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAATCACTGGTTTTGGCTaGGAACTTTTGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGITGFG*ELLRRS
Trigger: GCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGAT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGGTGAGGTCTTCCACTaGTACATCACACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVGEVFH*YITLAS
Trigger: GGATGCCAGTGTGATGTATCAGTGGAAGACCTCACC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTCGGCTCTTCTTATCTaGTGTGATTTGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHSALLI*CDLPFS
Trigger: GGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCCGACCGAGCATACTaGGATCGTCTGTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPDRAY*DRLWSH
Trigger: ATGAGACCACAGACGATCTCAGTATGCTCGGTCGGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACCTGTTTTTCAACCTTaGCCACCCGACCGAGCATAC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKPVFQP*PPDRAY
Trigger: GTATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCATTTGGCGTCAGAATaGACTGCAGGCCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVHLASE*TAGLSR
Trigger: TCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAATG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACATTTGGCGTCAGAATaGACTGCAGGCCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKHLASE*TAGLSR
Trigger: TCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAATG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFGGCHC*AIALTN
Trigger: ATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGGCHC*AIALTN
Trigger: ATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACAACAAGGCAGGTGGTaGCGTCAGAAATGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGQQGRW*RQKCFP
Trigger: AGGAAAGCATTTCTGACGTCACCACCTGCCTTGTTG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCAACAAGGCAGGTGGTaGCGTCAGAAATGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLQQGRW*RQKCFP
Trigger: AGGAAAGCATTTCTGACGTCACCACCTGCCTTGTTG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHVLGEI*LCNLNI
Trigger: AATGTTCAGGTTGCACAGTCAAATCTCACCAAGGAC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGCCTTACAAATGCTCTaGGATGATCGTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSALQML*DDRDLP
Trigger: TGGAAGGTCACGATCATCTCAGAGCATTTGTAAGGC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTATTTCAGTTTGACATaGGGCAAGCTGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHYFSLT*GKLRAS
Trigger: AGATGCCCTCAGCTTGCCTCATGTCAAACTGAAATA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTGGCTGAAGTTCTGGTaGCCTAAGATAGCTAGATGG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSWLKFW*PKIARW
Trigger: CCATCTAGCTATCTTAGGTCACCAGAACTTCAGCCA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCAGGGGAGAGTCAATaGTGGAGAAAGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILAGESQ*WRKPVG
Trigger: CCCAACAGGCTTTCTCCATCATTGACTCTCCCCTGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCTGGTTAAGGCCTGGTaGAGTTCAGAAGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLVKAW*SSEAKY
Trigger: GTATTTTGCTTCTGAACTTCACCAGGCCTTAACCAG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAGAATCAGTGCTACCTaGAAGTTGCTGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVRISAT*KLLPPS
Trigger: GGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAGAATCAGTGCTACCTaGAAGTTGCTGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKRISAT*KLLPPS
Trigger: GGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTGTAGGTTTTGTTTCTaGATCTTCAGTCGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNCRFCF*IFSRQQ
Trigger: TTGCTGACGACTGAAGATTCAGAAACAAAACCTACA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCCAGTAATTTCCAAGTaGCTCCCCTTCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVPVISK*LPFGPC
Trigger: GCATGGACCGAAGGGGAGGCACTTGGAAATTACTGG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGAAGGAGTGCAAAGCCTaGAGAAAGCAATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSKECKA*RKQSSQ
Trigger: CTGGGAAGATTGCTTTCTGCAGGCTTTGCACTCCTT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGCAGCCACTGTTTTGTaGGGAACCCGAAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSAATVL*GTRKIF
Trigger: AAAGATCTTTCGGGTTCCGCACAAAACAGTGGCTGC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGGCGTCAGAATGAACTaGAGGCCTCTCGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVGVRMN*RPLEML
Trigger: CAACATCTCGAGAGGCCTGCAGTTCATTCTGACGCC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGGCGTCAGAATGAACTaGAGGCCTCTCGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKGVRMN*RPLEML
Trigger: CAACATCTCGAGAGGCCTGCAGTTCATTCTGACGCC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGCACAGACAAAGATTTaGCCAAGTCCTTCGGCACCA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGAQTKI*PSPSAP
Trigger: TGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGCACAGACAAAGATTTaGCCAAGTCCTTCGGCACCA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLAQTKI*PSPSAP
Trigger: TGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGGTAAAAATCTTGGCTaGCTCTGGAGCCACTTGACT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSGKNLG*LWSHLT
Trigger: AGTCAAGTGGCTCCAGAGGCAGCCAAGATTTTTACC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCTCCTGCCTTACAAATaGTCTGAGATGATCGTGACC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLLPYK*SEMIVT
Trigger: GGTCACGATCATCTCAGAGCATTTGTAAGGCAGGAG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKWGWRH*RETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTGTATGCAACATTCTTaGAAGGGGGAATCACAACTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNCMQHS*KGESQL
Trigger: AAGTTGTGATTCCCCCTTGCAAGAATGTTGCATACA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGTGTGTGTGTGTGTATaGAACATTCTTGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSVCVCV*NILARG
Trigger: CCCCCTTGCAAGAATGTTGCATACACACACACACAC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATATGTCCAAGAATCAGTaGTACCTGAAAGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHMSKNQ*YLKVAA
Trigger: GGCAGCAACTTTCAGGTAGCACTGATTCTTGGACAT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTATTCAGAATTCCTGCTaGCAGTGGGGTTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLIQNSC*QWGLTQ
Trigger: CTGGGTCAAACCCCACTGGCAGCAGGAATTCTGAAT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTCAGTCGTCAGCAATaGTGGGTGAGCTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLFSRQQ*WVSCTV
Trigger: CACAGTACAGCTCACCCAGCATTGCTGACGACTGAA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAAATCCGGACCTGTTTaGGGCGTCACTTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVKSGPV*GVTLRG
Trigger: CCCTCTCAAAGTGACGCCCCAAACAGGTCCGGATTT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCAAGGCCTTCAAGTGTaGCTTCCAGGTTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLQGLQV*LPGCNG
Trigger: TCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTGTGATGTCGGTGCTTaGGGACCTCCTGTCACCTAC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRCDVGA*GPPVTY
Trigger: GTAGGTGACAGGAGGTCCCCAAGCACCGACATCACA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTGTGATGTCGGTGCTTaGGGACCTCCTGTCACCTAC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFCDVGA*GPPVTY
Trigger: GTAGGTGACAGGAGGTCCCCAAGCACCGACATCACA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTTGCAATGGTGTTGGTaGCTGCCACTGCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLQWCW*LPLLSH
Trigger: ATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGTTTGCAATGGTGTTaGTGGCTGCCACTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGLQWC*WLPLLS
Trigger: GCTCAGCAGTGGCAGCCACCAACACCATTGCAAACC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGGTTTGCAATGGTGTTaGTGGCTGCCACTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAGLQWC*WLPLLS
Trigger: GCTCAGCAGTGGCAGCCACCAACACCATTGCAAACC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCAGATGCTTGATGGCTaGGAGAGGAGGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILQMLDG*ERRWDL
Trigger: CAGATCCCACCTCCTCTCCCAGCCATCAAGCATCTG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCCTGAACATTTTCCTTaGAGGCAACAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLPEHFP*RQQGRW
Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAATGTTCAGG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAGTCCTTCGGCACCATaGGACAGACAGACAACAGAG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSPSAP*DRQTTE
Trigger: CTCTGTTGTCTGTCTGTCCCATGGTGCCGAAGGACT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAATCTTGGCTGCCTCTaGAGCCACTTGACTCACTCC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKNLGCL*SHLTHS
Trigger: GGAGTGAGTCAAGTGGCTCCAGAGGCAGCCAAGATT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTGGATTCCCTCCATTTaGGGTAAAAATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHWIPSI*GKNLGC
Trigger: GCAGCCAAGATTTTTACCCCAAATGGAGGGAATCCA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAQYWQA*GWRHCR
Trigger: TCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCAGTATTGGCAAGCCTaGGGTTGGCGCCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRQYWQA*GWRHCR
Trigger: TCTGCAATGGCGCCAACCCCAGGCTTGCCAATACTG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTTGCCAACTTCCTGGTaGTGTTTCTGGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLPTSW*CFWVLF
Trigger: GAAAAGAACCCAGAAACACCACCAGGAAGTTGGCAA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAATTCTGCTTGGCTGCTaGAGAAGTACTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGILLGC*RSTSGG
Trigger: GCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAAT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTATTCTGCTTGGCTGCTaGAGAAGTACTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLILLGC*RSTSGG
Trigger: GCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAAT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCCTGCTCATTCTGCTTaGCTGCTGGAGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLPAHSA*LLEKYF
Trigger: GAAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACCTGGGGATGGAGGCTaGTTAAGGCCTGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAPGDGG*LRPGEV
Trigger: AACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCCTGGGGATGGAGGCTaGTTAAGGCCTGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRPGDGG*LRPGEV
Trigger: AACTTCACCAGGCCTTAACCAGCCTCCATCCCCAGG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGAGAACTGGTTGACCTaGGGATGGAGGCTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVENWLT*GWRLVK
Trigger: CTTAACCAGCCTCCATCCCCAGGTCAACCAGTTCTC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGGTAAAGCGGAGAACTaGTTGACCTGGGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILGKAEN*LTWGWR
Trigger: CCTCCATCCCCAGGTCAACCAGTTCTCCGCTTTACC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGGTAAAGCGGAGAACTaGTTGACCTGGGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFGKAEN*LTWGWR
Trigger: CCTCCATCCCCAGGTCAACCAGTTCTCCGCTTTACC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGTCTTAGAATCCAAGTaGGATGCGAAGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHVLESK*DAKRKL
Trigger: AAGCTTCCTCTTCGCATCCCACTTGGATTCTAAGAC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACTGGCTTTAGGTCAGTaGAGGGGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKLALGQ*RGVCVC
Trigger: ACACACACACACACCCCTCCACTGACCTAAAGCCAG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAATTCCTGCTGCCAGTaGGGTTTGACCCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVNSCCQ*GLTQDR
Trigger: TCTGTCCTGGGTCAAACCCCACTGGCAGCAGGAATT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAATTCCTGCTGCCAGTaGGGTTTGACCCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKNSCCQ*GLTQDR
Trigger: TCTGTCCTGGGTCAAACCCCACTGGCAGCAGGAATT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTCTTGTCATCTATCACTaGTTTTGGCTGAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: CFKIFTEQAPGCPWVLDLLVIYH*FWLRTF
Trigger: AAAAGTTCTCAGCCAAAACCAGTGATAGATGACAAG...AAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CCA 90 bp CTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTCCATTGATCTTAATGTaGCCCTTGTCATCTATCACT +
Preference number: 4 (lower is better)
Translates to: LTVFQDIHRASTWLSLGLPLILM*PLSSIT
Trigger: AGTGATAGATGACAAGGGCCACATTAAGATCAATGG...AAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CCA 90 bp TGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTCTCAATAAAATGTGTTaGCAAGTGAATGTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: CFKIFTEQAPGCPWVLDLLNKMC*QVNVCY
Trigger: GTAGCAGACATTCACTTGCCAACACATTTTATTGAG...AAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTTTGGGGCGTCACTTTaGGAGGGTTTCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRFGASL*EGFSCS
Trigger: GGAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTTTGGGGCGTCACTTTaGGAGGGTTTCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFFGASL*EGFSCS
Trigger: GGAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGATCAAGAGGCAACTTaGGGCCAATTTTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGDQEAT*GQFCVL
Trigger: GAGCACACAAAATTGGCCTCAAGTTGCCTCTTGATC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGATCAAGAGGCAACTTaGGGCCAATTTTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLDQEAT*GQFCVL
Trigger: GAGCACACAAAATTGGCCTCAAGTTGCCTCTTGATC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAGAAACAACTGCTATTaGAGCGATAAGAACAATGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESRNNCY*SDKNNG
Trigger: ACCATTGTTCTTATCGCTTCAATAGCAGTTGTTTCT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAGAAACAACTGCTATTaGAGCGATAAGAACAATGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNRNNCY*SDKNNG
Trigger: ACCATTGTTCTTATCGCTTCAATAGCAGTTGTTTCT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCTATGTACCAAGCTGTaGTTAATTCCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLCTKL*LIPCCE
Trigger: CTCACAGCAAGGAATTAATCACAGCTTGGTACATAG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCTGACTCTGCTTCCGTaGGGTGTACATTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLTLLP*GVHSEE
Trigger: CTCTTCAGAATGTACACCTCACGGAAGCAGAGTCAG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342056.6
ENST00000355635.7
ENST00000402622.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTTAAAACTTAGCTTCTaGCTCTGCTTCCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLKLSF*LCFREV
Trigger: CACCTCACGGAAGCAGAGTCAGAAGCTAAGTTTTAA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342056.6
ENST00000355635.7
ENST00000402622.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCTCCTGTCACCTACTaGGGCTTGTCGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPPVTY*GLSALN
Trigger: ATTAAGAGCCGACAAGCCTCAGTAGGTGACAGGAGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCCTCCTGTCACCTACTaGGGCTTGTCGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFPPVTY*GLSALN
Trigger: ATTAAGAGCCGACAAGCCTCAGTAGGTGACAGGAGG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACCTCCTGTCACCTACTaGGGCTTGTCGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAPPVTY*GLSALN
Trigger: ATTAAGAGCCGACAAGCCTCAGTAGGTGACAGGAGG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAATCACTGGTTTTGGCTaGGAACTTTTGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKITGFG*ELLRRS
Trigger: GCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGAT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGGTGAGGTCTTCCACTaGTACATCACACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAGEVFH*YITLAS
Trigger: GGATGCCAGTGTGATGTATCAGTGGAAGACCTCACC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSSYLM*FALFQE
Trigger: TTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTCGGCTCTTCTTATCTaGTGTGATTTGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSALLI*CDLPFS
Trigger: GGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCCTGTTTTTCAACCTTaGCCACCCGACCGAGCATAC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFPVFQP*PPDRAY
Trigger: GTATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCTGTTTTTCAACCTTaGCCACCCGACCGAGCATAC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPVFQP*PPDRAY
Trigger: GTATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCCTGTTTTTCAACCTTaGCCACCCGACCGAGCATAC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRPVFQP*PPDRAY
Trigger: GTATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCATTTGGCGTCAGAATaGACTGCAGGCCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILHLASE*TAGLSR
Trigger: TCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAATG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAGAAAGTCTGGGCACTaGACTCATTTGGCGTCAGAA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGRKSGH*THLASE
Trigger: TTCTGACGCCAAATGAGTTCAGTGCCCAGACTTTCT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGCACCTGTGTTGCTTaGCTGTGCATAGTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGTCVA*LCIVGL
Trigger: TAGCCCTACTATGCACAGTCAAGCAACACAGGTGCC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGGCACCTGTGTTGCTTaGCTGTGCATAGTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILGTCVA*LCIVGL
Trigger: TAGCCCTACTATGCACAGTCAAGCAACACAGGTGCC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGCTGAGCCATCGCTTTaGCTAATTGGCACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVAEPSL*LIGTCV
Trigger: AACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACAACAAGGCAGGTGGTaGCGTCAGAAATGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKQQGRW*RQKCFP
Trigger: AGGAAAGCATTTCTGACGTCACCACCTGCCTTGTTG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCAACAAGGCAGGTGGTaGCGTCAGAAATGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVQQGRW*RQKCFP
Trigger: AGGAAAGCATTTCTGACGTCACCACCTGCCTTGTTG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSVLGEI*LCNLNI
Trigger: AATGTTCAGGTTGCACAGTCAAATCTCACCAAGGAC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGTTCCTCGGTCGACCTaGTCAGGTTTTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAVPRST*SGFAQT
Trigger: TGTCTGTGCAAAACCTGATCAGGTCGACCGAGGAAC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGCCTTACAAATGCTCTaGGATGATCGTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLALQML*DDRDLP
Trigger: TGGAAGGTCACGATCATCTCAGAGCATTTGTAAGGC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGCCTTACAAATGCTCTaGGATGATCGTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGALQML*DDRDLP
Trigger: TGGAAGGTCACGATCATCTCAGAGCATTTGTAAGGC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCAATGGCTGTTCTACTaGCCAGTATTTCATACGCTT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHQWLFY*PVFHTL
Trigger: AAGCGTATGAAATACTGGTCAGTAGAACAGCCATTG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATGGCTGAAGTTCTGGTaGCCTAAGATAGCTAGATGG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGWLKFW*PKIARW
Trigger: CCATCTAGCTATCTTAGGTCACCAGAACTTCAGCCA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSCHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCTGGTTAAGGCCTGGTaGAGTTCAGAAGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLVKAW*SSEAKY
Trigger: GTATTTTGCTTCTGAACTTCACCAGGCCTTAACCAG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGAGAATCAGTGCTACCTaGAAGTTGCTGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILRISAT*KLLPPS
Trigger: GGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAGAATCAGTGCTACCTaGAAGTTGCTGCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFRISAT*KLLPPS
Trigger: GGAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGAGCTGTACTGTGTTTaGGACTTAACGAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGELYCV*DLTRPK
Trigger: CTTAGGCCTCGTTAAGTCTCAAACACAGTACAGCTC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATATCACATTTTGCTATaGTTAAGACCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESYHILL*LRPQCC
Trigger: ACAGCACTGAGGTCTTAATCATAGCAAAATGTGATA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAACTTTAATGATAGCTTaGAATGGATATGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESTLMIA*NGYGVP
Trigger: GGGAACACCATATCCATTTCAAGCTATCATTAAAGT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACACTTTAATGATAGCTTaGAATGGATATGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNTLMIA*NGYGVP
Trigger: GGGAACACCATATCCATTTCAAGCTATCATTAAAGT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGTTAAAACTTAGCTTCTaGTTGGTAGGGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWLKLSF*LVGLQV
Trigger: CACCTGCAGCCCTACCAATCAGAAGCTAAGTTTTAA...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR TCA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGGAGCACCTTCATTGTTaGCCAGAAATGATCATCCTC +
Preference number: 4 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWEHLHC*PEMIIL
Trigger: GAGGATGATCATTTCTGGTCAACAATGAAGGTGCTC...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGAGGCCAATTTTGTGTaGTCAGGGATGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSEANFV*SGMVEN
Trigger: GTTTTCTACCATCCCTGAGCACACAAAATTGGCCTC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCAGTAATTTCCAAGTaGCTCCCCTTCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPVISK*LPFGPC
Trigger: GCATGGACCGAAGGGGAGGCACTTGGAAATTACTGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACCAGTAATTTCCAAGTaGCTCCCCTTCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAPVISK*LPFGPC
Trigger: GCATGGACCGAAGGGGAGGCACTTGGAAATTACTGG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCCAGTAATTTCCAAGTaGCTCCCCTTCGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRPVISK*LPFGPC
Trigger: GCATGGACCGAAGGGGAGGCACTTGGAAATTACTGG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTAAGGAGTGCAAAGCCTaGAGAAAGCAATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLKECKA*RKQSSQ
Trigger: CTGGGAAGATTGCTTTCTGCAGGCTTTGCACTCCTT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAACCTGAGCCAAGAATaGCGGCAGGAAGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKNLSQE*RQEVQR
Trigger: TCTTTGCACTTCCTGCCGGCATTCTTGGCTCAGGTT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGTGTGGCTTCCAGGTTaGAATGGAAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSVWLPG*NGNRFL
Trigger: GAGAAATCTGTTTCCATTGCAACCTGGAAGCCACAC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCATATACATCATCAGTaGCAAGGGCTGTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSHIHHQ*QGLCQH
Trigger: ATGCTGACACAGCCCTTGGCACTGATGATGTATATG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAACCCGAAAGATCTTTaGTATCCACAGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHNPKDL*YPQGFD
Trigger: ATCAAAGCCCTGTGGATAGCAAAGATCTTTCGGGTT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGCGTCAGAATGAACTaGAGGCCTCTCGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGVRMN*RPLEML
Trigger: CAACATCTCGAGAGGCCTGCAGTTCATTCTGACGCC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCGTATTTATTTGGTTTaGAATGGTGTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHRIYLV*NGVGGC
Trigger: GCAGCCACCAACACCATTGCAAACCAAATAAATACG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGACCTGATCAGGTTTTaGACAGACAAAGATTTGCCC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSDLIRF*TDKDLP
Trigger: GGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTGGGGTTGGCGCCATTaGAGAGAAACCAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRWGWRH*RETSPI
Trigger: GATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTTCTCTCCCTCTCATTaGCCTTTGAGGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVFSPSH*PLRGKS
Trigger: TGACTTCCCCCTCAAAGGGCAATGAGAGGGAGAGAA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATTCTCTCCCTCTCATTaGCCTTTGAGGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKFSPSH*PLRGKS
Trigger: TGACTTCCCCCTCAAAGGGCAATGAGAGGGAGAGAA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAACAAGCAGTCAGCATTaGTTGCTTTCTGATAAATAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESTSSQH*LLSDKY
Trigger: GTATTTATCAGAAAGCAAGCAATGCTGACTGCTTGT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGCAGCATTTATGTCTaGCAAGGAAACAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGSIYV*QGNNFL
Trigger: AAGGAAGTTGTTTCCTTGGCAGACATAAATGCTGCC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLLILLG*WRSTSG
Trigger: TCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGTGTGTGTGTGTGTATaGAACATTCTTGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGVCVCV*NILARG
Trigger: CCCCCTTGCAAGAATGTTGCATACACACACACACAC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGTGTGTGTGTGTGTATaGAACATTCTTGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLVCVCV*NILARG
Trigger: CCCCCTTGCAAGAATGTTGCATACACACACACACAC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGTGCTACCTGAAAGTTaGTGCCTCCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILVLPES*CLPPLP
Trigger: AGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCAC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGTGCTACCTGAAAGTTaGTGCCTCCCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAVLPES*CLPPLP
Trigger: AGGAAGAGGAGGGAGGCAGCAACTTTCAGGTAGCAC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAATTCAGAATTCCTGCTaGCAGTGGGGTTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKIQNSC*QWGLTQ
Trigger: CTGGGTCAAACCCCACTGGCAGCAGGAATTCTGAAT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATACATTCAGAATTCCTaGTGCCAGTGGGGTTTGACC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGYIQNS*CQWGLT
Trigger: GGTCAAACCCCACTGGCAGCAGGAATTCTGAATGTA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTCATCCTTACAGTTTTaGTTTGCAAATGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSSLQF*FANGMR
Trigger: TCTCATGCCATTTGCAAAGCAAAACTGTAAGGATGA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAACTTAGCTTCTGACTaGTTGATGCTTCCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHNLASD*LMLPLV
Trigger: AACAAGGGGAAGCATCAAGCAGTCAGAAGCTAAGTT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355194.8
ENST00000370398.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAAATCCGGACCTGTTTaGGGCGTCACTTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRKSGPV*GVTLRG
Trigger: CCCTCTCAAAGTGACGCCCCAAACAGGTCCGGATTT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACAAGGCCTTCAAGTGTaGCTTCCAGGTTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKQGLQV*LPGCNG
Trigger: TCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGAATGACAGTTTTAAGTaGTGGGGTGAGGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSNDSFK*WGEVFH
Trigger: GTGGAAGACCTCACCCCACCACTTAAAACTGTCATT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTCAAAAGGTGGGATCTaGAATGAAGCCAAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLSKGGI*NEAKAR
Trigger: CCTCGCTTTGGCTTCATTCCAGATCCCACCTTTTGA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTTGCAATGGTGTTGGTaGCTGCCACTGCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLQWCW*LPLLSH
Trigger: ATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATTGGGGCTGCTGGCTTaGGTGCCGTATTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKLGLLA*VPYLFG
Trigger: ACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAGTTGTTGGGGCTGCTaGCTTGGGTGCCGTATTTAT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVSCWGC*LGCRIY
Trigger: ATAAATACGGCACCCAAGCCAGCAGCCCCAACAACT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGGGTGCAGAGTTTCTaGCCTGGGCAGATGCTTGAT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARVQSF*PGQMLD
Trigger: ATCAAGCATCTGCCCAGGCCAGAAACTCTGCACCCT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACCTGAACATTTTCCTTaGAGGCAACAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKPEHFP*RQQGRW
Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAATGTTCAGG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAGTCCTTCGGCACCATaGGACAGACAGACAACAGAG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSPSAP*DRQTTE
Trigger: CTCTGTTGTCTGTCTGTCCCATGGTGCCGAAGGACT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAATCTTGGCTGCCTCTaGAGCCACTTGACTCACTCC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLANLGCL*SHLTHS
Trigger: GGAGTGAGTCAAGTGGCTCCAGAGGCAGCCAAGATT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAATCTTGGCTGCCTCTaGAGCCACTTGACTCACTCC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFNLGCL*SHLTHS
Trigger: GGAGTGAGTCAAGTGGCTCCAGAGGCAGCCAAGATT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGAATCTTGGCTGCCTCTaGAGCCACTTGACTCACTCC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILNLGCL*SHLTHS
Trigger: GGAGTGAGTCAAGTGGCTCCAGAGGCAGCCAAGATT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTGGATTCCCTCCATTTaGGGTAAAAATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSWIPSI*GKNLGC
Trigger: GCAGCCAAGATTTTTACCCCAAATGGAGGGAATCCA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACACATTACTAAATGAGTaGGTTAATGTCGATGCACCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNTLLNE*VNVDAP
Trigger: AGGTGCATCGACATTAACCCACTCATTTAGTAATGT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATTACATAGGCAGTATTaGCAAGCCTGGGGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLALHRQY*QAWGWR
Trigger: GCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTTACATAGGCAGTATTaGCAAGCCTGGGGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLHRQY*QAWGWR
Trigger: GCGCCAACCCCAGGCTTGCCAATACTGCCTATGTAA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTTGCCAACTTCCTGGTaGTGTTTCTGGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLPTSW*CFWVLF
Trigger: GAAAAGAACCCAGAAACACCACCAGGAAGTTGGCAA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTGGCTTTAGGTCAGTaGAGGGGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLALGQ*RGVCVC
Trigger: ACACACACACACACCCCTCCACTGACCTAAAGCCAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCTGGCTTTAGGTCAGTaGAGGGGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLALGQ*RGVCVC
Trigger: ACACACACACACACCCCTCCACTGACCTAAAGCCAG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAATTCCTGCTGCCAGTaGGGTTTGACCCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLANSCCQ*GLTQDR
Trigger: TCTGTCCTGGGTCAAACCCCACTGGCAGCAGGAATT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTAGTCGTCAGCAATGCTaGGTGAGCTGTACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLSRQQC*VSCTVF
Trigger: AAACACAGTACAGCTCACCCAGCATTGCTGACGACT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGAATCACTGAATCAATaGGAGGTGAGAAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSESLNQ*EVRKAP
Trigger: AGGTGCCTTTCTCACCTCCCATTGATTCAGTGATTC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGATCAAGAGGCAACTTaGGGCCAATTTTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVDQEAT*GQFCVL
Trigger: GAGCACACAAAATTGGCCTCAAGTTGCCTCTTGATC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGAAACGGAGACTTCTaGGTGCAGACGTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGNGDF*VQTWQK
Trigger: TTTTTGCCACGTCTGCACTCAGAAGTCTCCGTTTCC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCTATGTACCAAGCTGTaGTTAATTCCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLCTKL*LIPCCE
Trigger: CTCACAGCAAGGAATTAATCACAGCTTGGTACATAG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTGACTCTGCTTCCGTaGGGTGTACATTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLTLLP*GVHSEE
Trigger: CTCTTCAGAATGTACACCTCACGGAAGCAGAGTCAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342056.6
ENST00000355635.7
ENST00000402622.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCACAACATGTCCAGATaGCCAGCAGAATATTGTTCA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSHNMSR*PAEYCS
Trigger: TGAACAATATTCTGCTGGTCATCTGGACATGTTGTG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAGAAAGTCTGGGCACTaGACTCATTTGGCGTCAGAA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKRKSGH*THLASE
Trigger: TTCTGACGCCAAATGAGTTCAGTGCCCAGACTTTCT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCTGAGCCATCGCTTTaGCTAATTGGCACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILAEPSL*LIGTCV
Trigger: AACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTGAGCCATCGCTTTaGCTAATTGGCACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRAEPSL*LIGTCV
Trigger: AACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGCTGAGCCATCGCTTTaGCTAATTGGCACCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAAEPSL*LIGTCV
Trigger: AACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCAACAAGGCAGGTGGTaGCGTCAGAAATGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILQQGRW*RQKCFP
Trigger: AGGAAAGCATTTCTGACGTCACCACCTGCCTTGTTG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGVLGEI*LCNLNI
Trigger: AATGTTCAGGTTGCACAGTCAAATCTCACCAAGGAC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLVLGEI*LCNLNI
Trigger: AATGTTCAGGTTGCACAGTCAAATCTCACCAAGGAC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGCCTTACAAATGCTCTaGGATGATCGTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVALQML*DDRDLP
Trigger: TGGAAGGTCACGATCATCTCAGAGCATTTGTAAGGC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTATTTCAGTTTGACATaGGGCAAGCTGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLYFSLT*GKLRAS
Trigger: AGATGCCCTCAGCTTGCCTCATGTCAAACTGAAATA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATATTTCAGTTTGACATaGGGCAAGCTGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGYFSLT*GKLRAS
Trigger: AGATGCCCTCAGCTTGCCTCATGTCAAACTGAAATA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTTGCCTCACTGGCCCTaGATTTCATTATTTGCACAT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLPHWP*ISLFAH
Trigger: ATGTGCAAATAATGAAATTCAGGGCCAGTGAGGCAA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGAGCTGTACTGTGTTTaGGACTTAACGAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKELYCV*DLTRPK
Trigger: CTTAGGCCTCGTTAAGTCTCAAACACAGTACAGCTC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGCTTTGCAAATGGCATaGGAATTGGTCAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSALQMA*ELVNLC
Trigger: GCACAAATTGACCAATTCTCATGCCATTTGCAAAGC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGAGGCCAATTTTGTGTaGTCAGGGATGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGEANFV*SGMVEN
Trigger: GTTTTCTACCATCCCTGAGCACACAAAATTGGCCTC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAAGGAGTGCAAAGCCTaGAGAAAGCAATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKKECKA*RKQSSQ
Trigger: CTGGGAAGATTGCTTTCTGCAGGCTTTGCACTCCTT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAACCTGAGCCAAGAATaGCGGCAGGAAGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFNLSQE*RQEVQR
Trigger: TCTTTGCACTTCCTGCCGGCATTCTTGGCTCAGGTT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAACCTGAGCCAAGAATaGCGGCAGGAAGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRNLSQE*RQEVQR
Trigger: TCTTTGCACTTCCTGCCGGCATTCTTGGCTCAGGTT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGAACCTGAGCCAAGAATaGCGGCAGGAAGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILNLSQE*RQEVQR
Trigger: TCTTTGCACTTCCTGCCGGCATTCTTGGCTCAGGTT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGTGTGGCTTCCAGGTTaGAATGGAAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGVWLPG*NGNRFL
Trigger: GAGAAATCTGTTTCCATTGCAACCTGGAAGCCACAC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGTGTGGCTTCCAGGTTaGAATGGAAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLVWLPG*NGNRFL
Trigger: GAGAAATCTGTTTCCATTGCAACCTGGAAGCCACAC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGCAGCCACTGTTTTGTaGGGAACCCGAAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKAATVL*GTRKIF
Trigger: AAAGATCTTTCGGGTTCCGCACAAAACAGTGGCTGC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGCTGCTGGCTTGGGTaGCGTATTTATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGCWLG*RIYLVC
Trigger: GCAAACCAAATAAATACGGCACCCAAGCCAGCAGCC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGGCTGCTGGCTTGGGTaGCGTATTTATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFGCWLG*RIYLVC
Trigger: GCAAACCAAATAAATACGGCACCCAAGCCAGCAGCC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGGCTGCTGGCTTGGGTaGCGTATTTATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAGCWLG*RIYLVC
Trigger: GCAAACCAAATAAATACGGCACCCAAGCCAGCAGCC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCACAGACAAAGATTTaGCCAAGTCCTTCGGCACCA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRAQTKI*PSPSAP
Trigger: TGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGACCTGATCAGGTTTTaGACAGACAAAGATTTGCCC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGDLIRF*TDKDLP
Trigger: GGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGGTAAAAATCTTGGCTaGCTCTGGAGCCACTTGACT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKGKNLG*LWSHLT
Trigger: AGTCAAGTGGCTCCAGAGGCAGCCAAGATTTTTACC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGGTAAAAATCTTGGCTaGCTCTGGAGCCACTTGACT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVGKNLG*LWSHLT
Trigger: AGTCAAGTGGCTCCAGAGGCAGCCAAGATTTTTACC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCTCCTGCCTTACAAATaGTCTGAGATGATCGTGACC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLLPYK*SEMIVT
Trigger: GGTCACGATCATCTCAGAGCATTTGTAAGGCAGGAG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATATAGCTTCTCACACTTaGCCTTTACATAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHIASHT*PLHRQY
Trigger: ATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTAT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATTCTCTCCCTCTCATTaGCCTTTGAGGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAFSPSH*PLRGKS
Trigger: TGACTTCCCCCTCAAAGGGCAATGAGAGGGAGAGAA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTTCTCTCCCTCTCATTaGCCTTTGAGGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILFSPSH*PLRGKS
Trigger: TGACTTCCCCCTCAAAGGGCAATGAGAGGGAGAGAA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCTGATTTGCAGACTCTaGCAGTACTATCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLICRL*QYYLAS
Trigger: AGAAGCTAGATAGTACTGGCAGAGTCTGCAAATCAG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGGCAGCATTTATGTCTaGCAAGGAAACAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSGSIYV*QGNNFL
Trigger: AAGGAAGTTGTTTCCTTGGCAGACATAAATGCTGCC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKLILLG*WRSTSG
Trigger: TCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLILLG*WRSTSG
Trigger: TCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTATGTCCAAGAATCAGTaGTACCTGAAAGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLMSKNQ*YLKVAA
Trigger: GGCAGCAACTTTCAGGTAGCACTGATTCTTGGACAT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAATGTCCAAGAATCAGTaGTACCTGAAAGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGMSKNQ*YLKVAA
Trigger: GGCAGCAACTTTCAGGTAGCACTGATTCTTGGACAT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAATTCAGAATTCCTGCTaGCAGTGGGGTTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAIQNSC*QWGLTQ
Trigger: CTGGGTCAAACCCCACTGGCAGCAGGAATTCTGAAT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATACATTCAGAATTCCTaGTGCCAGTGGGGTTTGACC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKYIQNS*CQWGLT
Trigger: GGTCAAACCCCACTGGCAGCAGGAATTCTGAATGTA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCATATGGCTACTCAGTaGTCAGCTAAATTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSHMATQ*SAKLCF
Trigger: GAAGCACAATTTAGCTGAGCACTGAGTAGCCATATG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGAATTGGTCAATTTGTaGCTGATTTCCTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHELVNL*LISSSL
Trigger: TAGAGAGGAGGAAATCAGGCACAAATTGACCAATTC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAGGAAACAGACAATTaGATTGTCATACATGACTTA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESQETDN*IVIHDL
Trigger: TAAGTCATGTATGACAATGCAATTGTCTGTTTCCTG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCAGGAAACAGACAATTaGATTGTCATACATGACTTA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNQETDN*IVIHDL
Trigger: TAAGTCATGTATGACAATGCAATTGTCTGTTTCCTG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCAAGGCCTTCAAGTGTaGCTTCCAGGTTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRQGLQV*LPGCNG
Trigger: TCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCAAGGCCTTCAAGTGTaGCTTCCAGGTTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILQGLQV*LPGCNG
Trigger: TCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACAAGGCCTTCAAGTGTaGCTTCCAGGTTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAQGLQV*LPGCNG
Trigger: TCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGATCTATCACTGGTTTTaGCTGAGAACTTTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSIYHWF*LRTFEA
Trigger: CGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGAT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGATCTATCACTGGTTTTaGCTGAGAACTTTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWIYHWF*LRTFEA
Trigger: CGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGAT...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACACTGATACATCACACTaGCATCCTTTTTCATCATAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNTDTSH*HPFSSY
Trigger: ATATGATGAAAAAGGATGCCAGTGTGATGTATCAGT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGTAGGCAGTCCAGCTTaGATTCTATGGACTGTACCT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKVGSPA*ILWTVP
Trigger: AGGTACAGTCCATAGAATCCAAGCTGGACTGCCTAC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATCAAAAGGTGGGATCTaGAATGAAGCCAAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSKGGI*NEAKAR
Trigger: CCTCGCTTTGGCTTCATTCCAGATCCCACCTTTTGA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTATTTGGTTTGCAATaGTGTTGGTGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLLFGLQ*CWWLPL
Trigger: CAGTGGCAGCCACCAACACCATTGCAAACCAAATAA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATTATTTGGTTTGCAATaGTGTTGGTGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGLFGLQ*CWWLPL
Trigger: CAGTGGCAGCCACCAACACCATTGCAAACCAAATAA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATTGGGGCTGCTGGCTTaGGTGCCGTATTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLALGLLA*VPYLFG
Trigger: ACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTTGGGGCTGCTGGCTTaGGTGCCGTATTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRLGLLA*VPYLFG
Trigger: ACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGTTGTTGGGGCTGCTaGCTTGGGTGCCGTATTTAT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLASCWGC*LGCRIY
Trigger: ATAAATACGGCACCCAAGCCAGCAGCCCCAACAACT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCCTGAACATTTTCCTTaGAGGCAACAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFPEHFP*RQQGRW
Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAATGTTCAGG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCTGAACATTTTCCTTaGAGGCAACAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPEHFP*RQQGRW
Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAATGTTCAGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCCTGAACATTTTCCTTaGAGGCAACAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRPEHFP*RQQGRW
Trigger: CCACCTGCCTTGTTGCCTCCAAGGAAAATGTTCAGG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATGGATTCCCTCCATTTaGGGTAAAAATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGWIPSI*GKNLGC
Trigger: GCAGCCAAGATTTTTACCCCAAATGGAGGGAATCCA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTACTTTGCCAACTTCCTaGTGGTGTTTCTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLTLPTS*WCFWVL
Trigger: AAGAACCCAGAAACACCACCAGGAAGTTGGCAAAGT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAACTTTGCCAACTTCCTaGTGGTGTTTCTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGTLPTS*WCFWVL
Trigger: AAGAACCCAGAAACACCACCAGGAAGTTGGCAAAGT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCCTAAGATAGCTAGATaGGTTTCTAACAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHPKIAR*VSNKQS
Trigger: TGACTGCTTGTTAGAAACCCATCTAGCTATCTTAGG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGATTCTGCTTGGCTGCTaGAGAAGTACTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRILLGC*RSTSGG
Trigger: GCCTCCAGAAGTACTTCTCCAGCAGCCAAGCAGAAT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCCTGCTCATTCTGCTTaGCTGCTGGAGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFPAHSA*LLEKYF
Trigger: GAAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTCAGAAGCAAAATACTaGCAGGGAATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHSEAKY*QGMNKE
Trigger: CTCCTTATTCATTCCCTGCCAGTATTTTGCTTCTGA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGTCTTAGAATCCAAGTaGGATGCGAAGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLVLESK*DAKRKL
Trigger: AAGCTTCCTCTTCGCATCCCACTTGGATTCTAAGAC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTACTCAGAAAGCATATaGCTACTCAGTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSYSESI*LLSAQL
Trigger: TAGCTGAGCACTGAGTAGCCATATGCTTTCTGAGTA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGAATCACTGAATCAATaGGAGGTGAGAAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLESLNQ*EVRKAP
Trigger: AGGTGCCTTTCTCACCTCCCATTGATTCAGTGATTC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGTTTTGCTTTGCAAATaGCATGAGAATTGGTCAATT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCNILARGNHNVLLCK*HENWSI
Trigger: AATTGACCAATTCTCATGCCATTTGCAAAGCAAAAC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAATGATAGCTTGAAATaGATATGGTGTTCCCGATTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESNDSLK*IWCSRF
Trigger: AAATCGGGAACACCATATCCATTTCAAGCTATCATT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGATCAAGAGGCAACTTaGGGCCAATTTTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILDQEAT*GQFCVL
Trigger: GAGCACACAAAATTGGCCTCAAGTTGCCTCTTGATC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTTAAAACTTAGCTTCTaGCTCTGCTTCCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLKLSF*LCFREV
Trigger: CACCTCACGGAAGCAGAGTCAGAAGCTAAGTTTTAA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342056.6
ENST00000355635.7
ENST00000402622.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGAGAAAGTCTGGGCACTaGACTCATTTGGCGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILRKSGH*THLASE
Trigger: TTCTGACGCCAAATGAGTTCAGTGCCCAGACTTTCT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKVLGEI*LCNLNI
Trigger: AATGTTCAGGTTGCACAGTCAAATCTCACCAAGGAC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVVLGEI*LCNLNI
Trigger: AATGTTCAGGTTGCACAGTCAAATCTCACCAAGGAC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGCCTTACAAATGCTCTaGGATGATCGTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFALQML*DDRDLP
Trigger: TGGAAGGTCACGATCATCTCAGAGCATTTGTAAGGC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCCTTACAAATGCTCTaGGATGATCGTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILALQML*DDRDLP
Trigger: TGGAAGGTCACGATCATCTCAGAGCATTTGTAAGGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATATTTCAGTTTGACATaGGGCAAGCTGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKYFSLT*GKLRAS
Trigger: AGATGCCCTCAGCTTGCCTCATGTCAAACTGAAATA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTGCCTCACTGGCCCTaGATTTCATTATTTGCACAT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLLPHWP*ISLFAH
Trigger: ATGTGCAAATAATGAAATTCAGGGCCAGTGAGGCAA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTGGCTGAAGTTCTGGTaGCCTAAGATAGCTAGATGG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILWLKFW*PKIARW
Trigger: CCATCTAGCTATCTTAGGTCACCAGAACTTCAGCCA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTGGCTGAAGTTCTGGTaGCCTAAGATAGCTAGATGG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFWLKFW*PKIARW
Trigger: CCATCTAGCTATCTTAGGTCACCAGAACTTCAGCCA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKCHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVCHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGAGCTGTACTGTGTTTaGGACTTAACGAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAELYCV*DLTRPK
Trigger: CTTAGGCCTCGTTAAGTCTCAAACACAGTACAGCTC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTGTAGGTTTTGTTTCTaGATCTTCAGTCGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSCRFCF*IFSRQQ
Trigger: TTGCTGACGACTGAAGATTCAGAAACAAAACCTACA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGCTTTGCAAATGGCATaGGAATTGGTCAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLALQMA*ELVNLC
Trigger: GCACAAATTGACCAATTCTCATGCCATTTGCAAAGC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGATTGTTGACCAGAAATaGTCATCCTCCTTACTGTGT +
Preference number: 4 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWIVDQK*SSSLLC
Trigger: ACACAGTAAGGAGGATGATCATTTCTGGTCAACAAT...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGAGGCCAATTTTGTGTaGTCAGGGATGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVEANFV*SGMVEN
Trigger: GTTTTCTACCATCCCTGAGCACACAAAATTGGCCTC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGAGGCCAATTTTGTGTaGTCAGGGATGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKEANFV*SGMVEN
Trigger: GTTTTCTACCATCCCTGAGCACACAAAATTGGCCTC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTACGGAGACTTCTGAGTaGAGACGTGGCAAAAATATT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLTETSE*RRGKNI
Trigger: AATATTTTTGCCACGTCTGCACTCAGAAGTCTCCGT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAAGGAGTGCAAAGCCTaGAGAAAGCAATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAKECKA*RKQSSQ
Trigger: CTGGGAAGATTGCTTTCTGCAGGCTTTGCACTCCTT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAAGGAGTGCAAAGCCTaGAGAAAGCAATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFKECKA*RKQSSQ
Trigger: CTGGGAAGATTGCTTTCTGCAGGCTTTGCACTCCTT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAAGGAGTGCAAAGCCTaGAGAAAGCAATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRKECKA*RKQSSQ
Trigger: CTGGGAAGATTGCTTTCTGCAGGCTTTGCACTCCTT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAGATTTCTCATCAGCTaGGTAACTACGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGRFLIS*VTTPNT
Trigger: TGTGTTTGGCGTAGTTACGCAGCTGATGAGAAATCT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGTGTGGCTTCCAGGTTaGAATGGAAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKVWLPG*NGNRFL
Trigger: GAGAAATCTGTTTCCATTGCAACCTGGAAGCCACAC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTGTGGTCTCATGTTCTaGTGTTATTTTCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLCGLMF*CYFLSA
Trigger: AGCCGAGAGAAAATAACAGCAGAACATGAGACCACA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGCAGCCACTGTTTTGTaGGGAACCCGAAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAAATVL*GTRKIF
Trigger: AAAGATCTTTCGGGTTCCGCACAAAACAGTGGCTGC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGCAGCCACTGTTTTGTaGGGAACCCGAAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFAATVL*GTRKIF
Trigger: AAAGATCTTTCGGGTTCCGCACAAAACAGTGGCTGC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCAGCCACTGTTTTGTaGGGAACCCGAAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILAATVL*GTRKIF
Trigger: AAAGATCTTTCGGGTTCCGCACAAAACAGTGGCTGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACGTATTTATTTGGTTTaGAATGGTGTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGRIYLV*NGVGGC
Trigger: GCAGCCACCAACACCATTGCAAACCAAATAAATACG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGACCTGATCAGGTTTTaGACAGACAAAGATTTGCCC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKDLIRF*TDKDLP
Trigger: GGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGGTAAAAATCTTGGCTaGCTCTGGAGCCACTTGACT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILGKNLG*LWSHLT
Trigger: AGTCAAGTGGCTCCAGAGGCAGCCAAGATTTTTACC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGTAAAAATCTTGGCTaGCTCTGGAGCCACTTGACT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGKNLG*LWSHLT
Trigger: AGTCAAGTGGCTCCAGAGGCAGCCAAGATTTTTACC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTCCTGCCTTACAAATaGTCTGAGATGATCGTGACC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLLPYK*SEMIVT
Trigger: GGTCACGATCATCTCAGAGCATTTGTAAGGCAGGAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACTCCTGCCTTACAAATaGTCTGAGATGATCGTGACC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLALLPYK*SEMIVT
Trigger: GGTCACGATCATCTCAGAGCATTTGTAAGGCAGGAG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLNGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGGCAGCATTTATGTCTaGCAAGGAAACAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLGSIYV*QGNNFL
Trigger: AAGGAAGTTGTTTCCTTGGCAGACATAAATGCTGCC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLILLG*WRSTSG
Trigger: TCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACTCATTCTGCTTGGCTaGTGGAGAAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLALILLG*WRSTSG
Trigger: TCCAGAAGTACTTCTCCAGCAGCCAAGCAGAATGAG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTGTATGCAACATTCTTaGAAGGGGGAATCACAACTT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSCMQHS*KGESQL
Trigger: AAGTTGTGATTCCCCCTTGCAAGAATGTTGCATACA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTACATTCAGAATTCCTaGTGCCAGTGGGGTTTGACC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRYIQNS*CQWGLT
Trigger: GGTCAAACCCCACTGGCAGCAGGAATTCTGAATGTA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTACATTCAGAATTCCTaGTGCCAGTGGGGTTTGACC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILYIQNS*CQWGLT
Trigger: GGTCAAACCCCACTGGCAGCAGGAATTCTGAATGTA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATACATTCAGAATTCCTaGTGCCAGTGGGGTTTGACC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAYIQNS*CQWGLT
Trigger: GGTCAAACCCCACTGGCAGCAGGAATTCTGAATGTA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCATATGGCTACTCAGTaGTCAGCTAAATTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLHMATQ*SAKLCF
Trigger: GAAGCACAATTTAGCTGAGCACTGAGTAGCCATATG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACATATGGCTACTCAGTaGTCAGCTAAATTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGHMATQ*SAKLCF
Trigger: GAAGCACAATTTAGCTGAGCACTGAGTAGCCATATG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGAATTGGTCAATTTGTaGCTGATTTCCTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSELVNL*LISSSL
Trigger: TAGAGAGGAGGAAATCAGGCACAAATTGACCAATTC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGCTTCCAGGTTGCAATaGAAACAGATTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGASRLQ*KQISHQ
Trigger: CTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAATCTATCACTGGTTTTaGCTGAGAACTTTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGIYHWF*LRTFEA
Trigger: CGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGAT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTATCTATCACTGGTTTTaGCTGAGAACTTTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLIYHWF*LRTFEA
Trigger: CGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGAT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAATGACAGTTTTAAGTaGTGGGGTGAGGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVNDSFK*WGEVFH
Trigger: GTGGAAGACCTCACCCCACCACTTAAAACTGTCATT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGTAGGCAGTCCAGCTTaGATTCTATGGACTGTACCT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILVGSPA*ILWTVP
Trigger: AGGTACAGTCCATAGAATCCAAGCTGGACTGCCTAC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGTAGGCAGTCCAGCTTaGATTCTATGGACTGTACCT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRVGSPA*ILWTVP
Trigger: AGGTACAGTCCATAGAATCCAAGCTGGACTGCCTAC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTCAAAAGGTGGGATCTaGAATGAAGCCAAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILSKGGI*NEAKAR
Trigger: CCTCGCTTTGGCTTCATTCCAGATCCCACCTTTTGA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCAAAAGGTGGGATCTaGAATGAAGCCAAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSKGGI*NEAKAR
Trigger: CCTCGCTTTGGCTTCATTCCAGATCCCACCTTTTGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATCAAAAGGTGGGATCTaGAATGAAGCCAAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLASKGGI*NEAKAR
Trigger: CCTCGCTTTGGCTTCATTCCAGATCCCACCTTTTGA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAATCGCTTTGACTAATTaGCACCTGTGTTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGIALTN*HLCCLT
Trigger: AGTCAAGCAACACAGGTGCCAATTAGTCAAAGCGAT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTATCGCTTTGACTAATTaGCACCTGTGTTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLIALTN*HLCCLT
Trigger: AGTCAAGCAACACAGGTGCCAATTAGTCAAAGCGAT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGGTGCCGTATTTATTTaGTTTGCAATGGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGGAVFI*FAMVLV
Trigger: CACCAACACCATTGCAAACCAAATAAATACGGCACC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATGGATTCCCTCCATTTaGGGTAAAAATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKWIPSI*GKNLGC
Trigger: GCAGCCAAGATTTTTACCCCAAATGGAGGGAATCCA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATTGCCAACTTCCTGGTaGTGTTTCTGGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKLPTSW*CFWVLF
Trigger: GAAAAGAACCCAGAAACACCACCAGGAAGTTGGCAA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAACTTTGCCAACTTCCTaGTGGTGTTTCTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKTLPTS*WCFWVL
Trigger: AAGAACCCAGAAACACCACCAGGAAGTTGGCAAAGT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCCTAAGATAGCTAGATaGGTTTCTAACAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSPKIAR*VSNKQS
Trigger: TGACTGCTTGTTAGAAACCCATCTAGCTATCTTAGG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACTGGAGAAGTACTTCTaGAGGCAGCATTTATGTCTG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKLEKYF*RQHLCL
Trigger: CAGACATAAATGCTGCCTCCAGAAGTACTTCTCCAG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCTGGAGAAGTACTTCTaGAGGCAGCATTTATGTCTG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLEKYF*RQHLCL
Trigger: CAGACATAAATGCTGCCTCCAGAAGTACTTCTCCAG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTCAGAAGCAAAATACTaGCAGGGAATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSEAKY*QGMNKE
Trigger: CTCCTTATTCATTCCCTGCCAGTATTTTGCTTCTGA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGTCTTAGAATCCAAGTaGGATGCGAAGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKVLESK*DAKRKL
Trigger: AAGCTTCCTCTTCGCATCCCACTTGGATTCTAAGAC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAGTCGTCAGCAATGCTaGGTGAGCTGTACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSRQQC*VSCTVF
Trigger: AAACACAGTACAGCTCACCCAGCATTGCTGACGACT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGTCGTCAGCAATGCTaGGTGAGCTGTACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLASRQQC*VSCTVF
Trigger: AAACACAGTACAGCTCACCCAGCATTGCTGACGACT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTACTCAGAAAGCATATaGCTACTCAGTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLYSESI*LLSAQL
Trigger: TAGCTGAGCACTGAGTAGCCATATGCTTTCTGAGTA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATACTCAGAAAGCATATaGCTACTCAGTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGYSESI*LLSAQL
Trigger: TAGCTGAGCACTGAGTAGCCATATGCTTTCTGAGTA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGAATCACTGAATCAATaGGAGGTGAGAAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVESLNQ*EVRKAP
Trigger: AGGTGCCTTTCTCACCTCCCATTGATTCAGTGATTC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGAATCACTGAATCAATaGGAGGTGAGAAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKESLNQ*EVRKAP
Trigger: AGGTGCCTTTCTCACCTCCCATTGATTCAGTGATTC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACTATGTACCAAGCTGTaGTTAATTCCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKLCTKL*LIPCCE
Trigger: CTCACAGCAAGGAATTAATCACAGCTTGGTACATAG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCTATGTACCAAGCTGTaGTTAATTCCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLCTKL*LIPCCE
Trigger: CTCACAGCAAGGAATTAATCACAGCTTGGTACATAG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAACAGAACTTACTGCTTaGTGCTTCCCCTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKTELTA*CFPLFF
Trigger: AAAGAACAAGGGGAAGCATCAAGCAGTAAGTTCTGT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342056.6
ENST00000355635.7
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSSYLM*FALFQE
Trigger: TTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCGGCTCTTCTTATCTaGTGTGATTTGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSALLI*CDLPFS
Trigger: GGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTCGGCTCTTCTTATCTaGTGTGATTTGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILSALLI*CDLPFS
Trigger: GGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATCGGCTCTTCTTATCTaGTGTGATTTGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLASALLI*CDLPFS
Trigger: GGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTATTTCAGTTTGACATaGGGCAAGCTGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRYFSLT*GKLRAS
Trigger: AGATGCCCTCAGCTTGCCTCATGTCAAACTGAAATA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILCHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATGTCATTACGTTGGCTaGAGTTCTGGTGACCTAAGA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLACHYVG*SSGDLR
Trigger: TCTTAGGTCACCAGAACTTCAGCCAACGTAATGACA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCTGGTTAAGGCCTGGTaGAGTTCAGAAGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLVKAW*SSEAKY
Trigger: GTATTTTGCTTCTGAACTTCACCAGGCCTTAACCAG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGACTTTAATGATAGCTTaGAATGGATATGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSTLMIA*NGYGVP
Trigger: GGGAACACCATATCCATTTCAAGCTATCATTAAAGT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTTAAAACTTAGCTTCTaGTTGGTAGGGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRLKLSF*LVGLQV
Trigger: CACCTGCAGCCCTACCAATCAGAAGCTAAGTTTTAA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403813.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGAGGCCAATTTTGTGTaGTCAGGGATGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILEANFV*SGMVEN
Trigger: GTTTTCTACCATCCCTGAGCACACAAAATTGGCCTC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGAGGCCAATTTTGTGTaGTCAGGGATGGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAEANFV*SGMVEN
Trigger: GTTTTCTACCATCCCTGAGCACACAAAATTGGCCTC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCACGGAGACTTCTGAGTaGAGACGTGGCAAAAATATT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVTETSE*RRGKNI
Trigger: AATATTTTTGCCACGTCTGCACTCAGAAGTCTCCGT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGTGTGGCTTCCAGGTTaGAATGGAAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRVWLPG*NGNRFL
Trigger: GAGAAATCTGTTTCCATTGCAACCTGGAAGCCACAC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGTGTGGCTTCCAGGTTaGAATGGAAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILVWLPG*NGNRFL
Trigger: GAGAAATCTGTTTCCATTGCAACCTGGAAGCCACAC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGTGTGGCTTCCAGGTTaGAATGGAAACAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFVWLPG*NGNRFL
Trigger: GAGAAATCTGTTTCCATTGCAACCTGGAAGCCACAC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTACTACAGAACTTACTaGTTGATGCTTCCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLYYRTY*LMLPLV
Trigger: AACAAGGGGAAGCATCAAGCAGTAAGTTCTGTAGTA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342056.6
ENST00000355635.7
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCATATACATCATCAGTaGCAAGGGCTGTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFHIHHQ*QGLCQH
Trigger: ATGCTGACACAGCCCTTGGCACTGATGATGTATATG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTGTGGTCTCATGTTCTaGTGTTATTTTCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVCGLMF*CYFLSA
Trigger: AGCCGAGAGAAAATAACAGCAGAACATGAGACCACA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAACCCGAAAGATCTTTaGTATCCACAGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKNPKDL*YPQGFD
Trigger: ATCAAAGCCCTGTGGATAGCAAAGATCTTTCGGGTT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCGTATTTATTTGGTTTaGAATGGTGTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVRIYLV*NGVGGC
Trigger: GCAGCCACCAACACCATTGCAAACCAAATAAATACG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGACCTGATCAGGTTTTaGACAGACAAAGATTTGCCC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLADLIRF*TDKDLP
Trigger: GGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVNGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAATAGCTTCTCACACTTaGCCTTTACATAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGIASHT*PLHRQY
Trigger: ATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTAT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGGCAGCATTTATGTCTaGCAAGGAAACAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKGSIYV*QGNNFL
Trigger: AAGGAAGTTGTTTCCTTGGCAGACATAAATGCTGCC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCATGTCCAAGAATCAGTaGTACCTGAAAGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFMSKNQ*YLKVAA
Trigger: GGCAGCAACTTTCAGGTAGCACTGATTCTTGGACAT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGCTTCCAGGTTGCAATaGAAACAGATTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKASRLQ*KQISHQ
Trigger: CTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCATCTATCACTGGTTTTaGCTGAGAACTTTTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVIYHWF*LRTFEA
Trigger: CGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGAT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAATGACAGTTTTAAGTaGTGGGGTGAGGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFNDSFK*WGEVFH
Trigger: GTGGAAGACCTCACCCCACCACTTAAAACTGTCATT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAATCGCTTTGACTAATTaGCACCTGTGTTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKIALTN*HLCCLT
Trigger: AGTCAAGCAACACAGGTGCCAATTAGTCAAAGCGAT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTTATTTGGTTTGCAATaGTGTTGGTGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRLFGLQ*CWWLPL
Trigger: CAGTGGCAGCCACCAACACCATTGCAAACCAAATAA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTTATTTGGTTTGCAATaGTGTTGGTGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLFGLQ*CWWLPL
Trigger: CAGTGGCAGCCACCAACACCATTGCAAACCAAATAA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATTATTTGGTTTGCAATaGTGTTGGTGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLALFGLQ*CWWLPL
Trigger: CAGTGGCAGCCACCAACACCATTGCAAACCAAATAA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGGTGCCGTATTTATTTaGTTTGCAATGGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVGAVFI*FAMVLV
Trigger: CACCAACACCATTGCAAACCAAATAAATACGGCACC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTGGATTCCCTCCATTTaGGGTAAAAATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILWIPSI*GKNLGC
Trigger: GCAGCCAAGATTTTTACCCCAAATGGAGGGAATCCA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCCTGGTGGTGTTTCTaGGTTCTTTTCAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSWWCF*VLFKPF
Trigger: GAAAGGCTTGAAAAGAACCCAGAAACACCACCAGGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTTGCCAACTTCCTGGTaGTGTTTCTGGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLPTSW*CFWVLF
Trigger: GAAAAGAACCCAGAAACACCACCAGGAAGTTGGCAA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGACTTTGCCAACTTCCTaGTGGTGTTTCTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRTLPTS*WCFWVL
Trigger: AAGAACCCAGAAACACCACCAGGAAGTTGGCAAAGT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGTCTTAGAATCCAAGTaGGATGCGAAGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRVLESK*DAKRKL
Trigger: AAGCTTCCTCTTCGCATCCCACTTGGATTCTAAGAC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGTCTTAGAATCCAAGTaGGATGCGAAGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAVLESK*DAKRKL
Trigger: AAGCTTCCTCTTCGCATCCCACTTGGATTCTAAGAC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGAATCACTGAATCAATaGGAGGTGAGAAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAESLNQ*EVRKAP
Trigger: AGGTGCCTTTCTCACCTCCCATTGATTCAGTGATTC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAGCTTGAAATGGATATaGTGTTCCCGATTTATTTGT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHSLKWI*CSRFIC
Trigger: ACAAATAAATCGGGAACACCATATCCATTTCAAGCT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAATGATAGCTTGAAATaGATATGGTGTTCCCGATTT +
Preference number: 4 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHNDSLK*IWCSRF
Trigger: AAATCGGGAACACCATATCCATTTCAAGCTATCATT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTAGAAACAACTGCTATTaGAGCGATAAGAACAATGGT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLRNNCY*SDKNNG
Trigger: ACCATTGTTCTTATCGCTTCAATAGCAGTTGTTTCT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAGAAACAACTGCTATTaGAGCGATAAGAACAATGGT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGRNNCY*SDKNNG
Trigger: ACCATTGTTCTTATCGCTTCAATAGCAGTTGTTTCT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTATGTACCAAGCTGTaGTTAATTCCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLCTKL*LIPCCE
Trigger: CTCACAGCAAGGAATTAATCACAGCTTGGTACATAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACACAACATGTCCAGATaGCCAGCAGAATATTGTTCA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAHNMSR*PAEYCS
Trigger: TGAACAATATTCTGCTGGTCATCTGGACATGTTGTG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLSSYLM*FALFQE
Trigger: TTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSSYLM*FALFQE
Trigger: TTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCAATTCTGCTTTAGTTaGTACCTTATTAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLQFCFS*YLISSC
Trigger: ACAGCTGCTAATAAGGTATCAACTAAAGCAGAATTG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACAATTCTGCTTTAGTTaGTACCTTATTAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGQFCFS*YLISSC
Trigger: ACAGCTGCTAATAAGGTATCAACTAAAGCAGAATTG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATTGCCTCACTGGCCCTaGATTTCATTATTTGCACAT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLALPHWP*ISLFAH
Trigger: ATGTGCAAATAATGAAATTCAGGGCCAGTGAGGCAA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTTGCCTCACTGGCCCTaGATTTCATTATTTGCACAT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRLPHWP*ISLFAH
Trigger: ATGTGCAAATAATGAAATTCAGGGCCAGTGAGGCAA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCAATGGCTGTTCTACTaGCCAGTATTTCATACGCTT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILQWLFY*PVFHTL
Trigger: AAGCGTATGAAATACTGGTCAGTAGAACAGCCATTG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACAATGGCTGTTCTACTaGCCAGTATTTCATACGCTT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAQWLFY*PVFHTL
Trigger: AAGCGTATGAAATACTGGTCAGTAGAACAGCCATTG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATGTAGGTTTTGTTTCTaGATCTTCAGTCGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKCRFCF*IFSRQQ
Trigger: TTGCTGACGACTGAAGATTCAGAAACAAAACCTACA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTATCACATTTTGCTATaGTTAAGACCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLYHILL*LRPQCC
Trigger: ACAGCACTGAGGTCTTAATCATAGCAAAATGTGATA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCTTTGCAAATGGCATaGGAATTGGTCAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILALQMA*ELVNLC
Trigger: GCACAAATTGACCAATTCTCATGCCATTTGCAAAGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTACTTTAATGATAGCTTaGAATGGATATGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLTLMIA*NGYGVP
Trigger: GGGAACACCATATCCATTTCAAGCTATCATTAAAGT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTTAAAACTTAGCTTCTaGCTGCTTGATGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLKLSF*LLDASP
Trigger: AGGGGAAGCATCAAGCAGTCAGAAGCTAAGTTTTAA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355194.8
ENST00000370398.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGACGGAGACTTCTGAGTaGAGACGTGGCAAAAATATT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRTETSE*RRGKNI
Trigger: AATATTTTTGCCACGTCTGCACTCAGAAGTCTCCGT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCACGGAGACTTCTGAGTaGAGACGTGGCAAAAATATT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFTETSE*RRGKNI
Trigger: AATATTTTTGCCACGTCTGCACTCAGAAGTCTCCGT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGACGGAGACTTCTGAGTaGAGACGTGGCAAAAATATT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILTETSE*RRGKNI
Trigger: AATATTTTTGCCACGTCTGCACTCAGAAGTCTCCGT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAGATTTCTCATCAGCTaGGTAACTACGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRRFLIS*VTTPNT
Trigger: TGTGTTTGGCGTAGTTACGCAGCTGATGAGAAATCT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGATTTCTCATCAGCTaGGTAACTACGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARFLIS*VTTPNT
Trigger: TGTGTTTGGCGTAGTTACGCAGCTGATGAGAAATCT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTACTACAGAACTTACTaGTTGATGCTTCCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVYYRTY*LMLPLV
Trigger: AACAAGGGGAAGCATCAAGCAGTAAGTTCTGTAGTA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342056.6
ENST00000355635.7
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATGTGGTCTCATGTTCTaGTGTTATTTTCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLACGLMF*CYFLSA
Trigger: AGCCGAGAGAAAATAACAGCAGAACATGAGACCACA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTGTGGTCTCATGTTCTaGTGTTATTTTCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILCGLMF*CYFLSA
Trigger: AGCCGAGAGAAAATAACAGCAGAACATGAGACCACA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAACCCGAAAGATCTTTaGTATCCACAGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLANPKDL*YPQGFD
Trigger: ATCAAAGCCCTGTGGATAGCAAAGATCTTTCGGGTT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAACCCGAAAGATCTTTaGTATCCACAGGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRNPKDL*YPQGFD
Trigger: ATCAAAGCCCTGTGGATAGCAAAGATCTTTCGGGTT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCGTATTTATTTGGTTTaGAATGGTGTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILRIYLV*NGVGGC
Trigger: GCAGCCACCAACACCATTGCAAACCAAATAAATACG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACGTATTTATTTGGTTTaGAATGGTGTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARIYLV*NGVGGC
Trigger: GCAGCCACCAACACCATTGCAAACCAAATAAATACG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLANGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAACGGGCTTATAAACTaGCTTTCATGTTCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRNGLIN*LSCSSR
Trigger: TCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGATGTGCAAAATTGCTTaGCACAGCGCTAAATCACCA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRMCKIA*HSAKSP
Trigger: TGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACAT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAATAGCTTCTCACACTTaGCCTTTACATAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKIASHT*PLHRQY
Trigger: ATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTAT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCTGATTTGCAGACTCTaGCAGTACTATCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLICRL*QYYLAS
Trigger: AGAAGCTAGATAGTACTGGCAGAGTCTGCAAATCAG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCTGATTTGCAGACTCTaGCAGTACTATCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRLICRL*QYYLAS
Trigger: AGAAGCTAGATAGTACTGGCAGAGTCTGCAAATCAG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTAAGTGTTCTGATTTaGAGACTCTGCCAGTACTAT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLLSVLI*RLCQYY
Trigger: ATAGTACTGGCAGAGTCTGCAAATCAGAACACTTAA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTACAAGCAGTCAGCATTaGTTGCTTTCTGATAAATAC +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLTSSQH*LLSDKY
Trigger: GTATTTATCAGAAAGCAAGCAATGCTGACTGCTTGT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGCAGCATTTATGTCTaGCAAGGAAACAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGSIYV*QGNNFL
Trigger: AAGGAAGTTGTTTCCTTGGCAGACATAAATGCTGCC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATGTATGCAACATTCTTaGAAGGGGGAATCACAACTT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKCMQHS*KGESQL
Trigger: AAGTTGTGATTCCCCCTTGCAAGAATGTTGCATACA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCATATGGCTACTCAGTaGTCAGCTAAATTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFHMATQ*SAKLCF
Trigger: GAAGCACAATTTAGCTGAGCACTGAGTAGCCATATG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAACTTAGCTTCTGACTaGTTGATGCTTCCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFNLASD*LMLPLV
Trigger: AACAAGGGGAAGCATCAAGCAGTCAGAAGCTAAGTT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355194.8
ENST00000370398.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTCCAGGTTGCAATaGAAACAGATTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRASRLQ*KQISHQ
Trigger: CTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGCTTCCAGGTTGCAATaGAAACAGATTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAASRLQ*KQISHQ
Trigger: CTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCTTCCAGGTTGCAATaGAAACAGATTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILASRLQ*KQISHQ
Trigger: CTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAATCGCTTTGACTAATTaGCACCTGTGTTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAIALTN*HLCCLT
Trigger: AGTCAAGCAACACAGGTGCCAATTAGTCAAAGCGAT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCATCGCTTTGACTAATTaGCACCTGTGTTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFIALTN*HLCCLT
Trigger: AGTCAAGCAACACAGGTGCCAATTAGTCAAAGCGAT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGATCGCTTTGACTAATTaGCACCTGTGTTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRIALTN*HLCCLT
Trigger: AGTCAAGCAACACAGGTGCCAATTAGTCAAAGCGAT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGTGCCGTATTTATTTaGTTTGCAATGGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGAVFI*FAMVLV
Trigger: CACCAACACCATTGCAAACCAAATAAATACGGCACC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGGTGCCGTATTTATTTaGTTTGCAATGGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILGAVFI*FAMVLV
Trigger: CACCAACACCATTGCAAACCAAATAAATACGGCACC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAACATTACTAAATGAGTaGGTTAATGTCGATGCACCT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGTLLNE*VNVDAP
Trigger: AGGTGCATCGACATTAACCCACTCATTTAGTAATGT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACCTAAGATAGCTAGATaGGTTTCTAACAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKPKIAR*VSNKQS
Trigger: TGACTGCTTGTTAGAAACCCATCTAGCTATCTTAGG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCCTAAGATAGCTAGATaGGTTTCTAACAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVPKIAR*VSNKQS
Trigger: TGACTGCTTGTTAGAAACCCATCTAGCTATCTTAGG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTACTCAGAAAGCATATaGCTACTCAGTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFYSESI*LLSAQL
Trigger: TAGCTGAGCACTGAGTAGCCATATGCTTTCTGAGTA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTACTCAGAAAGCATATaGCTACTCAGTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILYSESI*LLSAQL
Trigger: TAGCTGAGCACTGAGTAGCCATATGCTTTCTGAGTA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGTTTTGCTTTGCAAATaGCATGAGAATTGGTCAATT +
Preference number: 4 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSVLLCK*HENWSI
Trigger: AATTGACCAATTCTCATGCCATTTGCAAAGCAAAAC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVSSYLM*FALFQE
Trigger: TTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVRLCRS*PLIKLI
Trigger: AATCAACTTTATAAGTGGTCAACTTCTACACAAGCG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKRLCRS*PLIKLI
Trigger: AATCAACTTTATAAGTGGTCAACTTCTACACAAGCG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTATCACATTTTGCTATaGTTAAGACCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVYHILL*LRPQCC
Trigger: ACAGCACTGAGGTCTTAATCATAGCAAAATGTGATA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATATCACATTTTGCTATaGTTAAGACCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKYHILL*LRPQCC
Trigger: ACAGCACTGAGGTCTTAATCATAGCAAAATGTGATA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGATAGCTTCTCACACTTaGCCTTTACATAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRIASHT*PLHRQY
Trigger: ATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTAT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGATAGCTTCTCACACTTaGCCTTTACATAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILIASHT*PLHRQY
Trigger: ATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTAT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCATAGCTTCTCACACTTaGCCTTTACATAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFIASHT*PLHRQY
Trigger: ATACTGCCTATGTAAAGGGCAAGTGTGAGAAGCTAT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCACAAGCAGTCAGCATTaGTTGCTTTCTGATAAATAC +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVTSSQH*LLSDKY
Trigger: GTATTTATCAGAAAGCAAGCAATGCTGACTGCTTGT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAACAAGCAGTCAGCATTaGTTGCTTTCTGATAAATAC +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKTSSQH*LLSDKY
Trigger: GTATTTATCAGAAAGCAAGCAATGCTGACTGCTTGT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTGTATGCAACATTCTTaGAAGGGGGAATCACAACTT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILCMQHS*KGESQL
Trigger: AAGTTGTGATTCCCCCTTGCAAGAATGTTGCATACA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTGTATGCAACATTCTTaGAAGGGGGAATCACAACTT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRCMQHS*KGESQL
Trigger: AAGTTGTGATTCCCCCTTGCAAGAATGTTGCATACA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGAATTGGTCAATTTGTaGCTGATTTCCTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRELVNL*LISSSL
Trigger: TAGAGAGGAGGAAATCAGGCACAAATTGACCAATTC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACAGGAAACAGACAATTaGATTGTCATACATGACTTA +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGQETDN*IVIHDL
Trigger: TAAGTCATGTATGACAATGCAATTGTCTGTTTCCTG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTACTGATACATCACACTaGCATCCTTTTTCATCATAT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLTDTSH*HPFSSY
Trigger: ATATGATGAAAAAGGATGCCAGTGTGATGTATCAGT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCACATTACTAAATGAGTaGGTTAATGTCGATGCACCT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVTLLNE*VNVDAP
Trigger: AGGTGCATCGACATTAACCCACTCATTTAGTAATGT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACCTAAGATAGCTAGATaGGTTTCTAACAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAPKIAR*VSNKQS
Trigger: TGACTGCTTGTTAGAAACCCATCTAGCTATCTTAGG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCTAAGATAGCTAGATaGGTTTCTAACAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPKIAR*VSNKQS
Trigger: TGACTGCTTGTTAGAAACCCATCTAGCTATCTTAGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCAGAAGCAAAATACTaGCAGGGAATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSEAKY*QGMNKE
Trigger: CTCCTTATTCATTCCCTGCCAGTATTTTGCTTCTGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTCAGAAGCAAAATACTaGCAGGGAATGAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSEAKY*QGMNKE
Trigger: CTCCTTATTCATTCCCTGCCAGTATTTTGCTTCTGA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGTTTTGCTTTGCAAATaGCATGAGAATTGGTCAATT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLVLLCK*HENWSI
Trigger: AATTGACCAATTCTCATGCCATTTGCAAAGCAAAAC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGTTTTGCTTTGCAAATaGCATGAGAATTGGTCAATT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGVLLCK*HENWSI
Trigger: AATTGACCAATTCTCATGCCATTTGCAAAGCAAAAC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAGCTTGAAATGGATATaGTGTTCCCGATTTATTTGT +
Preference number: 4 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSLKWI*CSRFIC
Trigger: ACAAATAAATCGGGAACACCATATCCATTTCAAGCT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTAATGATAGCTTGAAATaGATATGGTGTTCCCGATTT +
Preference number: 4 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLNDSLK*IWCSRF
Trigger: AAATCGGGAACACCATATCCATTTCAAGCTATCATT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAGAAACAACTGCTATTaGAGCGATAAGAACAATGGT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRRNNCY*SDKNNG
Trigger: ACCATTGTTCTTATCGCTTCAATAGCAGTTGTTTCT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGAAACAACTGCTATTaGAGCGATAAGAACAATGGT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARNNCY*SDKNNG
Trigger: ACCATTGTTCTTATCGCTTCAATAGCAGTTGTTTCT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSSYLM*FALFQE
Trigger: TTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACAAAGCAGAAATGCCTaGAATTTGAAGGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAQSRNA*NLKVFT
Trigger: AGTAAACACCTTCAAATTTCAGGCATTTCTGCTTTG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCAATTCTGCTTTAGTTaGTACCTTATTAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILQFCFS*YLISSC
Trigger: ACAGCTGCTAATAAGGTATCAACTAAAGCAGAATTG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCAATTCTGCTTTAGTTaGTACCTTATTAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRQFCFS*YLISSC
Trigger: ACAGCTGCTAATAAGGTATCAACTAAAGCAGAATTG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRRLCRS*PLIKLI
Trigger: AATCAACTTTATAAGTGGTCAACTTCTACACAAGCG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARLCRS*PLIKLI
Trigger: AATCAACTTTATAAGTGGTCAACTTCTACACAAGCG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCGCTTGTGTAGAAGTTaGCCACTTATAAAGTTGATT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILRLCRS*PLIKLI
Trigger: AATCAACTTTATAAGTGGTCAACTTCTACACAAGCG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATATCACATTTTGCTATaGTTAAGACCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAYHILL*LRPQCC
Trigger: ACAGCACTGAGGTCTTAATCATAGCAAAATGTGATA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAACTTTAATGATAGCTTaGAATGGATATGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLATLMIA*NGYGVP
Trigger: GGGAACACCATATCCATTTCAAGCTATCATTAAAGT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR TCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGACTTTAATGATAGCTTaGAATGGATATGGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRTLMIA*NGYGVP
Trigger: GGGAACACCATATCCATTTCAAGCTATCATTAAAGT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATTAAGTGTTCTGATTTaGAGACTCTGCCAGTACTAT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLALSVLI*RLCQYY
Trigger: ATAGTACTGGCAGAGTCTGCAAATCAGAACACTTAA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTTAAGTGTTCTGATTTaGAGACTCTGCCAGTACTAT +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLSVLI*RLCQYY
Trigger: ATAGTACTGGCAGAGTCTGCAAATCAGAACACTTAA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTTAAGTGTTCTGATTTaGAGACTCTGCCAGTACTAT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRLSVLI*RLCQYY
Trigger: ATAGTACTGGCAGAGTCTGCAAATCAGAACACTTAA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTTAAGTGTTCTGATTTaGAGACTCTGCCAGTACTAT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLSVLI*RLCQYY
Trigger: ATAGTACTGGCAGAGTCTGCAAATCAGAACACTTAA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAACAAGCAGTCAGCATTaGTTGCTTTCTGATAAATAC +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLATSSQH*LLSDKY
Trigger: GTATTTATCAGAAAGCAAGCAATGCTGACTGCTTGT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGACAAGCAGTCAGCATTaGTTGCTTTCTGATAAATAC +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILTSSQH*LLSDKY
Trigger: GTATTTATCAGAAAGCAAGCAATGCTGACTGCTTGT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTCATCCTTACAGTTTTaGTTTGCAAATGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSSLQF*FANGMR
Trigger: TCTCATGCCATTTGCAAAGCAAAACTGTAAGGATGA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCATCCTTACAGTTTTaGTTTGCAAATGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSSLQF*FANGMR
Trigger: TCTCATGCCATTTGCAAAGCAAAACTGTAAGGATGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTCATCCTTACAGTTTTaGTTTGCAAATGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: GWQIYLEISSHFYYSPILSSLQF*FANGMR
Trigger: TCTCATGCCATTTGCAAAGCAAAACTGTAAGGATGA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCAGGAAACAGACAATTaGATTGTCATACATGACTTA +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVQETDN*IVIHDL
Trigger: TAAGTCATGTATGACAATGCAATTGTCTGTTTCCTG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGACATTACTAAATGAGTaGGTTAATGTCGATGCACCT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRTLLNE*VNVDAP
Trigger: AGGTGCATCGACATTAACCCACTCATTTAGTAATGT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CCA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGTTTTGCTTTGCAAATaGCATGAGAATTGGTCAATT +
Preference number: 4 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKVLLCK*HENWSI
Trigger: AATTGACCAATTCTCATGCCATTTGCAAAGCAAAAC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGTTTTGCTTTGCAAATaGCATGAGAATTGGTCAATT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVVLLCK*HENWSI
Trigger: AATTGACCAATTCTCATGCCATTTGCAAAGCAAAAC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAGCTTGAAATGGATATaGTGTTCCCGATTTATTTGT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVSLKWI*CSRFIC
Trigger: ACAAATAAATCGGGAACACCATATCCATTTCAAGCT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAATGATAGCTTGAAATaGATATGGTGTTCCCGATTT +
Preference number: 4 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVNDSLK*IWCSRF
Trigger: AAATCGGGAACACCATATCCATTTCAAGCTATCATT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR GCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCAGGAAACAGACAATTaGATTGTCATACATGACTTA +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFQETDN*IVIHDL
Trigger: TAAGTCATGTATGACAATGCAATTGTCTGTTTCCTG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGACTGATACATCACACTaGCATCCTTTTTCATCATAT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRTDTSH*HPFSSY
Trigger: ATATGATGAAAAAGGATGCCAGTGTGATGTATCAGT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAACTGATACATCACACTaGCATCCTTTTTCATCATAT +
Preference number: 4 (lower is better)
Translates to: KQPFLLFPNSALVDTLLATDTSH*HPFSSY
Trigger: ATATGATGAAAAAGGATGCCAGTGTGATGTATCAGT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCACTGATACATCACACTaGCATCCTTTTTCATCATAT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFTDTSH*HPFSSY
Trigger: ATATGATGAAAAAGGATGCCAGTGTGATGTATCAGT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CCA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAGCTTGAAATGGATATaGTGTTCCCGATTTATTTGT +
Preference number: 4 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSLKWI*CSRFIC
Trigger: ACAAATAAATCGGGAACACCATATCCATTTCAAGCT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CCA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAATGATAGCTTGAAATaGATATGGTGTTCCCGATTT +
Preference number: 4 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRNDSLK*IWCSRF
Trigger: AAATCGGGAACACCATATCCATTTCAAGCTATCATT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS CCA 90 bp TTCACCCAGAGCCCGGCGGCGCCGCCCTCCTCTCCTCCCGCGTGGTaGCGGGGCATGGCATCACCACGGGCACCGCGAGGGGGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: FTQSPAAPPSSPPAW*RGMASPRAPRGGRQ
Trigger: CTGGCGGCCCCCTCGCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGAGGGCGGCGCCGCCGGGCTCTGGGTGAA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTGCACCCGCCGGTACTaGACGTTGCGCCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVCTRRY*TLRRQL
Trigger: GAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGCA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGAGGGCTGGGGAGGATaGGTGGAGTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLEGWGG*VEFRAS
Trigger: GGAGGCCCTGAACTCCACCAATCCTCCCCAGCCCTC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGGCCTGGGCAGATGCTaGATGGCTGGGAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVGLGRC*MAGRGG
Trigger: ACCTCCTCTCCCAGCCATCAAGCATCTGCCCAGGCC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS GCA 90 bp GTGGTGACGTCAGAAATGCTTTCCTGTAAGCCTGCAGGGTTAGGGTaGAGAGTTTCTGGCCTGGGCAGATGCTTGATGGCTGGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: VVTSEMLSCKPAGLG*RVSGLGRCLMAGRG
Trigger: TCCTCTCCCAGCCATCAAGCATCTGCCCAGGCCAGAAACTCTGCACCCTAACCCTGCAGGCTTACAGGAAAGCATTTCTGACGTCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTGCACCCGCCGGTACTaGACGTTGCGCCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNCTRRY*TLRRQL
Trigger: GAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGCA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCAGCTCTTCTGCACTTaGGTGGGACTGCCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLQLFCT*VGLPSA
Trigger: AGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCTG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS CCA 90 bp CTGGGAGAGGAGGTGGGATCTGTAAAGTTGTTGGGGCTGCTGGCTTaGGTGCCGTATTTATTTGGTTTGCAATGGTGTTGGTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LGEEVGSVKLLGLLA*VPYLFGLQWCWWLP
Trigger: TGGCAGCCACCAACACCATTGCAAACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAACAACTTTACAGATCCCACCTCCTCTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTGAGAGGGTTTCTCTaGCTCCCTCATTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLRGFL*LPHSRD
Trigger: GTCGCGGGAATGAGGGAGCAAGAGAAACCCTCTCAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGTTGGGGCTGCTGGCTaGGGTGCCGTATTTATTTGG +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLVGAAG*GAVFIW
Trigger: CCAAATAAATACGGCACCCAAGCCAGCAGCCCCAAC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGTGGGATCTGTAAAGTaGTTGGGGCTGCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVVGSVK*LGLLAW
Trigger: CCAAGCCAGCAGCCCCAACAACTTTACAGATCCCAC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGTGGGATCTGTAAAGTaGTTGGGGCTGCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLVGSVK*LGLLAW
Trigger: CCAAGCCAGCAGCCCCAACAACTTTACAGATCCCAC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGCCTGGGCAGATGCTaGATGGCTGGGAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGLGRC*MAGRGG
Trigger: ACCTCCTCTCCCAGCCATCAAGCATCTGCCCAGGCC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCTGGGGTTGGCGCCATaGCAGAGAAACCAGTCCAAT +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLGLAP*QRNQSN
Trigger: ATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS GCA 90 bp GGTAGGGCTGCAGGTGTGCAAGGCCTTCAAGTGTGGCTTCCAGGTTaGAATGGAAACAGATTTCTCATCAGCTGCGTAACTACGCCAAAC +
Preference number: 5 (lower is better)
Translates to: GRAAGVQGLQVWLPG*NGNRFLISCVTTPN
Trigger: GTTTGGCGTAGTTACGCAGCTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTGCACACCTGCAGCCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGTTTGGGGCGTCACTTaGAGAGGGTTTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLVWGVT*RGFLLL
Trigger: GAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAAC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCAGCTCTTCTGCACTTaGGTGGGACTGCCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNQLFCT*VGLPSA
Trigger: AGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCTG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTGGCACCTGTGTTGCTaGACTGTGCATAGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVWHLCC*TVHSRA
Trigger: AGCCCTACTATGCACAGTCAAGCAACACAGGTGCCA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGTGCACAGACAAAGATTaGCCCAAGTCCTTCGGCACC +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVCTDKD*PKSFGT
Trigger: GGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCA...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGAGGGCTGGGGAGGATaGGTGGAGTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHEGWGG*VEFRAS
Trigger: GGAGGCCCTGAACTCCACCAATCCTCCCCAGCCCTC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTTGCTGCTGGGTCTTGGACCTTaGCTGGTCAGACGTCACAAA +
Preference number: 5 (lower is better)
Translates to: QDIHRASTWLSLGLGPLLLGLGP*LVRRHK
Trigger: TTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCAG...CAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CAA 90 bp TGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTGGTTGTCCCTGGGTCTaGGACCTTTGCTGGTCAGAC +
Preference number: 5 (lower is better)
Translates to: CFKIFTEQAPGCPWVLDLGCPWV*DLCWSD
Trigger: GTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACC...AAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS TCA 90 bp ATCCCAGTAACTGATGTAGCTGATGTGAGTAAGTCCTGGCTTGCCTaGCCACATGTCAACACGGAGGAGCAGGGTAGTAGAGGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: IPVTDVADVSKSWLA*PHVNTEEQGSRGFR
Trigger: TCTGAAGCCTCTACTACCCTGCTCCTCCGTGTTGACATGTGGTCAGGCAAGCCAGGACTTACTCACATCAGCTACATCAGTTACTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445310.2
CDS CCA 90 bp GGCTGCAGGTGTGCAAGGCCTTCAAGTGTGGCTTCCAGGTTGCAATaGAAACAGATTTCTCATCAGCTGCGTAACTACGCCAAACACACT +
Preference number: 5 (lower is better)
Translates to: GCRCARPSSVASRLQ*KQISHQLRNYAKHT
Trigger: AGTGTGTTTGGCGTAGTTACGCAGCTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTGCACACCTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 90 bp CATAGTAGGGCTAAGCGCGTAGAAAGTCTGGGCACTGAACTCATTTaGCGTCAGAATGAACTGCAGGCCTCTCGAGATGTTGGCACTAGT +
Preference number: 5 (lower is better)
Translates to: HSRAKRVESLGTELI*RQNELQASRDVGTS
Trigger: ACTAGTGCCAACATCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAATGAGTTCAGTGCCCAGACTTTCTACGCGCTTAGCCCTACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 90 bp ATCTGTAAAGTTGTTGGGGCTGCTGGCTTGGGTGCCGTATTTATTTaGTTTGCAATGGTGTTGGTGGCTGCCACTGCTGAGCCATCGCTT +
Preference number: 5 (lower is better)
Translates to: ICKVVGAAGLGAVFI*FAMVLVAATAEPSL
Trigger: AAGCGATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAAACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAACAACTTTACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCGCCGGTACTTGACGTaGCGCCGGCAGCTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSRRYLT*RRQLWL
Trigger: TAGCCAGAGCTGCCGGCGCAACGTCAAGTACCGGCG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTGCACCCGCCGGTACTaGACGTTGCGCCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLCTRRY*TLRRQL
Trigger: GAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGCA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGACCTGTTTTTCAACCTaGACCACCCGACCGAGCATA +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVTCFST*TTRPSI
Trigger: TATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGGT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAGTAGGCAGTCCAGCTaGGATTCTATGGACTGTACC +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVSRQSS*DSMDCT
Trigger: GGTACAGTCCATAGAATCCAAGCTGGACTGCCTACT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAGGCCTCTCGAGATGTaGGCACTAGTTGATCTGGAT +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVRPLEM*ALVDLD
Trigger: ATCCAGATCAACTAGTGCCAACATCTCGAGAGGCCT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCAGGCCTCTCGAGATGTaGGCACTAGTTGATCTGGAT +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLRPLEM*ALVDLD
Trigger: ATCCAGATCAACTAGTGCCAACATCTCGAGAGGCCT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTTGGGGTAAAAATCTaGGCTGCCTCTGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLFGVKI*AASGAT
Trigger: AGTGGCTCCAGAGGCAGCCAAGATTTTTACCCCAAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCCCTCTCATTGCCCTTaGAGGGGGAAGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLPSHCP*RGKSFS
Trigger: AGAAAATGACTTCCCCCTCAAAGGGCAATGAGAGGG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGACGCCGGTACTTGACGTaGCGCCGGCAGCTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGRRYLT*RRQLWL
Trigger: TAGCCAGAGCTGCCGGCGCAACGTCAAGTACCGGCG...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTGCACCCGCCGGTACTaGACGTTGCGCCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVCTRRY*TLRRQL
Trigger: GAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGCA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTCCCCTTGTTCTTTCTaGGTAGGGCTGCAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSPCSF*VGLQVC
Trigger: GCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGTTGGGGCTGCTGGCTaGGGTGCCGTATTTATTTGG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNVGAAG*GAVFIW
Trigger: CCAAATAAATACGGCACCCAAGCCAGCAGCCCCAAC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGATCTGTAAAGTTGTaGGGGCTGCTGGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGSVKL*GLLAWV
Trigger: CACCCAAGCCAGCAGCCCCAACAACTTTACAGATCC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGGCCTGGGCAGATGCTaGATGGCTGGGAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSGLGRC*MAGRGG
Trigger: ACCTCCTCTCCCAGCCATCAAGCATCTGCCCAGGCC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCTCATAGAACGGTCCTaGGTGAGATTTGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLIERS*VRFDCA
Trigger: TGCACAGTCAAATCTCACCAAGGACCGTTCTATGAG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCGACCTGATCAGGTTTaGCACAGACAAAGATTTGCC +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVRPDQV*HRQRFA
Trigger: GGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAAACAACTTCCTTTCTaGAGTCCTCCTGTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVKQLPF*SPPVAR
Trigger: CCTAGCCACAGGAGGACTCAAGAAAGGAAGTTGTTT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTTACTACAGAACTTATaGGTAGGGCTGCAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLLLQNL*VGLQVC
Trigger: GCACACCTGCAGCCCTACCAATAAGTTCTGTAGTAA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402622.6
CDS TCA 90 bp TGCCGTATTTATTTGGTTTGCAATGGTGTTGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAATTGGCACCTGTGTTGCTTGACTGTG +
Preference number: 5 (lower is better)
Translates to: CRIYLVCNGVGGCHC*AIALTNWHLCCLTV
Trigger: CACAGTCAAGCAACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAAACCAAATAAATACGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS GCA 90 bp CCTGAAAGTTGTATATTCAGTTCCTCGGTCGACCTGATCAGGTTTTaGACAGACAAAGATTTGCCCAAGTCCTTCGGCACCATGGGACAG +
Preference number: 5 (lower is better)
Translates to: PESCIFSSSVDLIRF*TDKDLPKSFGTMGQ
Trigger: CTGTCCCATGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCGACCGAGGAACTGAATATACAACTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGTTTGGGGCGTCACTTaGAGAGGGTTTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESVWGVT*RGFLLL
Trigger: GAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAAC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTGCACCCGCCGGTACTaGACGTTGCGCCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRCTRRY*TLRRQL
Trigger: GAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGCA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAAACCTCAGTCTTCCTaGCCATCCTCTATATCGACA +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVKPQSS*PSSIST
Trigger: TGTCGATATAGAGGATGGCAAGGAAGACTGAGGTTT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCAGCTCTTCTGCACTTaGGTGGGACTGCCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSQLFCT*VGLPSA
Trigger: AGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCTG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CAA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGCAGCTCTTCTGCACTTaGGTGGGACTGCCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWQLFCT*VGLPSA
Trigger: AGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCTG...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCCGTATTTATTTGGTTaGCAATGGTGTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVPYLFG*QWCWWL
Trigger: CAGCCACCAACACCATTGCAAACCAAATAAATACGG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGGGTGCCGTATTTATTaGGTTTGCAATGGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVGCRIY*VCNGVG
Trigger: ACCAACACCATTGCAAACCAAATAAATACGGCACCC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATGCACAGACAAAGATTaGCCCAAGTCCTTCGGCACC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESCTDKD*PKSFGT
Trigger: GGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTGCACAGACAAAGATTaGCCCAAGTCCTTCGGCACC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNCTDKD*PKSFGT
Trigger: GGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCCCTGCTCATTCTGCTaGGCTGCTGGAGAAGTACTT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNPCSFC*AAGEVL
Trigger: AAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGAGGGCTGGGGAGGATaGGTGGAGTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKEGWGG*VEFRAS
Trigger: GGAGGCCCTGAACTCCACCAATCCTCCCCAGCCCTC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGTGTATGCAACATTCTaGCAAGGGGGAATCACAACT +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVVYATF*QGGITT
Trigger: AGTTGTGATTCCCCCTTGCAAGAATGTTGCATACAC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGAGAAGGCAGACACACTaGTACTCAGAAAGCATATGG +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVRRQTH*YSESIW
Trigger: CCATATGCTTTCTGAGTACAAGTGTGTCTGCCTTCT...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGATCAACCCTACATGTaGAAGAAGGCAGACACACTT +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVDQPYM*KKADTL
Trigger: AAGTGTGTCTGCCTTCTTCAACATGTAGGGTTGATC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS TCA 90 bp CTTTTCCTCATAGAACGGTCCTTGGTGAGATTTGACTGTGCAACCTaGACATTTTCCTTGGAGGCAACAAGGCAGGTGGTGACGTCAGAA +
Preference number: 5 (lower is better)
Translates to: LFLIERSLVRFDCAT*TFSLEATRQVVTSE
Trigger: TTCTGACGTCACCACCTGCCTTGTTGCCTCCAAGGAAAATGTTCAGGTTGCACAGTCAAATCTCACCAAGGACCGTTCTATGAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 90 bp TCAGGTTTTGCACAGACAAAGATTTGCCCAAGTCCTTCGGCACCATaGGACAGACAGACAACAGAGTTTCTCCTCCCATGTCAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: SGFAQTKICPSPSAP*DRQTTEFLLPCQSF
Trigger: AAAGCTTTGACATGGGAGGAGAAACTCTGTTGTCTGTCTGTCCCATGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCAAAACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 90 bp ATCATCCTCCTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTaGTTGTCCCTGGGTCTTGGACCTTTGCTGGTCAGACGTCACAAA +
Preference number: 5 (lower is better)
Translates to: IILLTVFQDIHRAST*LSLGLGPLLVRRHK
Trigger: TTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAGGAGGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACGCCGGTACTTGACGTaGCGCCGGCAGCTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARRYLT*RRQLWL
Trigger: TAGCCAGAGCTGCCGGCGCAACGTCAAGTACCGGCG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCGCCGGTACTTGACGTaGCGCCGGCAGCTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFRRYLT*RRQLWL
Trigger: TAGCCAGAGCTGCCGGCGCAACGTCAAGTACCGGCG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCGCCGGTACTTGACGTaGCGCCGGCAGCTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILRRYLT*RRQLWL
Trigger: TAGCCAGAGCTGCCGGCGCAACGTCAAGTACCGGCG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGATCTGTAAAGTTGTaGGGGCTGCTGGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGSVKL*GLLAWV
Trigger: CACCCAAGCCAGCAGCCCCAACAACTTTACAGATCC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGGCCTGGGCAGATGCTaGATGGCTGGGAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKGLGRC*MAGRGG
Trigger: ACCTCCTCTCCCAGCCATCAAGCATCTGCCCAGGCC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATTTGGGGTAAAAATCTaGGCTGCCTCTGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESFGVKI*AASGAT
Trigger: AGTGGCTCCAGAGGCAGCCAAGATTTTTACCCCAAA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCTGGGGTTGGCGCCATaGCAGAGAAACCAGTCCAAT +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHLGLAP*QRNQSN
Trigger: ATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCCCTCTCATTGCCCTTaGAGGGGGAAGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNPSHCP*RGKSFS
Trigger: AGAAAATGACTTCCCCCTCAAAGGGCAATGAGAGGG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGAGGGCTGGGGAGGATaGGTGGAGTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAEGWGG*VEFRAS
Trigger: GGAGGCCCTGAACTCCACCAATCCTCCCCAGCCCTC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGAGGGCTGGGGAGGATaGGTGGAGTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRREGWGG*VEFRAS
Trigger: GGAGGCCCTGAACTCCACCAATCCTCCCCAGCCCTC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS TCA 90 bp TCCCATGTCAAAGCTTTTCCTCATAGAACGGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATTTTCCTTGGAGGCAACAAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SHVKAFPHRTVLGEI*LCNLNIFLGGNKAG
Trigger: ACCTGCCTTGTTGCCTCCAAGGAAAATGTTCAGGTTGCACAGTCAAATCTCACCAAGGACCGTTCTATGAGGAAAAGCTTTGACATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 90 bp TTGACTCACTCCCTGAAAGTTGTATATTCAGTTCCTCGGTCGACCTaGTCAGGTTTTGCACAGACAAAGATTTGCCCAAGTCCTTCGGCA +
Preference number: 5 (lower is better)
Translates to: LTHSLKVVYSVPRST*SGFAQTKICPSPSA
Trigger: TGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCGACCGAGGAACTGAATATACAACTTTCAGGGAGTGAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 90 bp GTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTaGACCTTTGCTGGTCAGACGTCACAAATACATCAGAATGACAGT +
Preference number: 5 (lower is better)
Translates to: VSRYSQSKHLVVPGS*TFAGQTSQIHQNDS
Trigger: ACTGTCATTCTGATGTATTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGTTTGGGGCGTCACTTaGAGAGGGTTTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHVWGVT*RGFLLL
Trigger: GAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAAC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGGTAGAAAACTCTTTATaGGCATCCTTTTCCACCAGA +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVVENSL*ASFSTR
Trigger: TCTGGTGGAAAAGGATGCCAATAAAGAGTTTTCTAC...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCGTAGAAAACTCTTTATaGGCATCCTTTTCCACCAGA +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLVENSL*ASFSTR
Trigger: TCTGGTGGAAAAGGATGCCAATAAAGAGTTTTCTAC...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACAGCTCTTCTGCACTTaGGTGGGACTGCCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKQLFCT*VGLPSA
Trigger: AGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCTG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGTTGGGGCTGCTGGCTaGGGTGCCGTATTTATTTGG +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSVGAAG*GAVFIW
Trigger: CCAAATAAATACGGCACCCAAGCCAGCAGCCCCAAC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGTGGGATCTGTAAAGTaGTTGGGGCTGCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSVGSVK*LGLLAW
Trigger: CCAAGCCAGCAGCCCCAACAACTTTACAGATCCCAC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGGCCTGGGCAGATGCTaGATGGCTGGGAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAGLGRC*MAGRGG
Trigger: ACCTCCTCTCCCAGCCATCAAGCATCTGCCCAGGCC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCTGGGGTTGGCGCCATaGCAGAGAAACCAGTCCAAT +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLGLAP*QRNQSN
Trigger: ATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAAACAACTTCCTTTCTaGAGTCCTCCTGTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESKQLPF*SPPVAR
Trigger: CCTAGCCACAGGAGGACTCAAGAAAGGAAGTTGTTT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGCCTCCTTCTTCCTTaGAACATCCACTTGATAACC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGLLLP*NIHLIT
Trigger: GGTTATCAAGTGGATGTTCAAAGGAAGAAGGAGGCC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCCAGTGCTCAGCTAAATaGTGCTTCAAGACATCATTA +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLQCSAK*CFKTSL
Trigger: TAATGATGTCTTGAAGCACAATTTAGCTGAGCACTG...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCAGTGCTCAGCTAAATaGTGCTTCAAGACATCATTA +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVQCSAK*CFKTSL
Trigger: TAATGATGTCTTGAAGCACAATTTAGCTGAGCACTG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCATCATCCTTACAGTTTaGCTTTGCAAATGGCATGAG +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLIILTV*LCKWHE
Trigger: CTCATGCCATTTGCAAAGCAAAACTGTAAGGATGAT...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS CCA 90 bp TTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTaGGTCTTGGACCTTTGCTGGTCAGACGTCACAAATACATCAGAA +
Preference number: 5 (lower is better)
Translates to: LLCFKIFTEQAPGCP*VLDLCWSDVTNTSE
Trigger: TTCTGATGTATTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTGAGAGGGTTTCTCTaGCTCCCTCATTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLLRGFL*LPHSRD
Trigger: GTCGCGGGAATGAGGGAGCAAGAGAAACCCTCTCAA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATTGAGAGGGTTTCTCTaGCTCCCTCATTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGLRGFL*LPHSRD
Trigger: GTCGCGGGAATGAGGGAGCAAGAGAAACCCTCTCAA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAAACCTCAGTCTTCCTaGCCATCCTCTATATCGACA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNKPQSS*PSSIST
Trigger: TGTCGATATAGAGGATGGCAAGGAAGACTGAGGTTT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAGGACAGAGTATGTCCAAGAATCAGTGCTACCTGAAAGTTGCTGCCTCCCTCTATTACCCTGAGTTTTaGCAGAAACAACTGCTATTG +
Preference number: 5 (lower is better)
Translates to: PGQSMSKNQCYLKVAASLYYPEF*QKQLLL
Trigger: CAATAGCAGTTGTTTCTGCAAAAACTCAGGGTAATA...GAGGGAGGCAGCAACTTTCAGGTAGCACTGATTCTTGGACATACTCTGTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACAGTGTGGCTTCCAGGTaGCAATGGAAACAGATTTCT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNSVASR*QWKQIS
Trigger: AGAAATCTGTTTCCATTGCAACCTGGAAGCCACACT...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTCCCCTTGTTCTTTCTaGGTAGGGCTGCAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLSPCSF*VGLQVC
Trigger: GCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATCCCCTTGTTCTTTCTaGGTAGGGCTGCAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSPCSF*VGLQVC
Trigger: GCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCAGCTCTTCTGCACTTaGGTGGGACTGCCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFQLFCT*VGLPSA
Trigger: AGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCTG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCAGCTCTTCTGCACTTaGGTGGGACTGCCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILQLFCT*VGLPSA
Trigger: AGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCTG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAGTAGGCAGTCCAGCTaGGATTCTATGGACTGTACC +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHSRQSS*DSMDCT
Trigger: GGTACAGTCCATAGAATCCAAGCTGGACTGCCTACT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACGGGTGCCGTATTTATTaGGTTTGCAATGGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNGCRIY*VCNGVG
Trigger: ACCAACACCATTGCAAACCAAATAAATACGGCACCC...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGTTGGGGCTGCTGGCTaGGGTGCCGTATTTATTTGG +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLVGAAG*GAVFIW
Trigger: CCAAATAAATACGGCACCCAAGCCAGCAGCCCCAAC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGTTGGGGCTGCTGGCTaGGGTGCCGTATTTATTTGG +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGVGAAG*GAVFIW
Trigger: CCAAATAAATACGGCACCCAAGCCAGCAGCCCCAAC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGGATCTGTAAAGTTGTaGGGGCTGCTGGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLGSVKL*GLLAWV
Trigger: CACCCAAGCCAGCAGCCCCAACAACTTTACAGATCC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCTGGGGTTGGCGCCATaGCAGAGAAACCAGTCCAAT +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLLGLAP*QRNQSN
Trigger: ATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTTGAATGTCATTACGTaGGCTGAAGTTCTGGTGACC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNLNVIT*AEVLVT
Trigger: GGTCACCAGAACTTCAGCCAACGTAATGACATTCAA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGTGTATGCAACATTCTaGCAAGGGGGAATCACAACT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESVYATF*QGGITT
Trigger: AGTTGTGATTCCCCCTTGCAAGAATGTTGCATACAC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTAACGAGGCCTAAGGAGGGGTCCCCAATACATTCAGAATTCCTGCTGCCAGTGCACTTTAATGATAGCTaGAAATGGATATGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: LTRPKEGSPIHSEFLLPVHFNDS*KWIWCS
Trigger: GGAACACCATATCCATTTCAAGCTATCATTAAAGTG...CACTGGCAGCAGGAATTCTGAATGTATTGGGGACCCCTCCTTAGGCCTCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS GCA 90 bp ATCTGGATAAGCAGCCACTGTTTTGTGCGGAACCCGAAAGATCTTTaGTATCCACAGGGCTTTGATAGTCAGATGTCTGTTCACATTCAA +
Preference number: 5 (lower is better)
Translates to: IWISSHCFVRNPKDL*YPQGFDSQMSVHIQ
Trigger: TTGAATGTGAACAGACATCTGACTATCAAAGCCCTGTGGATAGCAAAGATCTTTCGGGTTCCGCACAAAACAGTGGCTGCTTATCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 90 bp ACAATTTGGATTCCCTCCATTTGGGGTAAAAATCTTGGCTGCCTCTaGAGCCACTTGACTCACTCCCTGAAAGTTGTATATTCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: TIWIPSIWGKNLGCL*SHLTHSLKVVYSVP
Trigger: AGGAACTGAATATACAACTTTCAGGGAGTGAGTCAAGTGGCTCCAGAGGCAGCCAAGATTTTTACCCCAAATGGAGGGAATCCAAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATTGAGAGGGTTTCTCTaGCTCCCTCATTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKLRGFL*LPHSRD
Trigger: GTCGCGGGAATGAGGGAGCAAGAGAAACCCTCTCAA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATCCCCTTGTTCTTTCTaGGTAGGGCTGCAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSPCSF*VGLQVC
Trigger: GCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACTACAGAACTTACTGCTaGATGCTTCCCCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNYRTYC*MLPLVL
Trigger: AAGAACAAGGGGAAGCATCAAGCAGTAAGTTCTGTA...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342056.6
ENST00000355635.7
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGACCTGTTTTTCAACCTaGACCACCCGACCGAGCATA +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSTCFST*TTRPSI
Trigger: TATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGGT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGCTATCCACAGGGCTTaGATAGTCAGATGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHAIHRA*IVRCLF
Trigger: GAACAGACATCTGACTATCAAAGCCCTGTGGATAGC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTGGCACCTGTGTTGCTaGACTGTGCATAGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLWHLCC*TVHSRA
Trigger: AGCCCTACTATGCACAGTCAAGCAACACAGGTGCCA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGGATCTGTAAAGTTGTaGGGGCTGCTGGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVGSVKL*GLLAWV
Trigger: CACCCAAGCCAGCAGCCCCAACAACTTTACAGATCC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGTGGGATCTGTAAAGTaGTTGGGGCTGCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKVGSVK*LGLLAW
Trigger: CCAAGCCAGCAGCCCCAACAACTTTACAGATCCCAC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATGCACAGACAAAGATTaGCCCAAGTCCTTCGGCACC +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGCTDKD*PKSFGT
Trigger: GGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCGACCTGATCAGGTTTaGCACAGACAAAGATTTGCC +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHRPDQV*HRQRFA
Trigger: GGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTTTGGGGTAAAAATCTaGGCTGCCTCTGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSFGVKI*AASGAT
Trigger: AGTGGCTCCAGAGGCAGCCAAGATTTTTACCCCAAA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCTGGGGTTGGCGCCATaGCAGAGAAACCAGTCCAAT +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVLGLAP*QRNQSN
Trigger: ATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGCCTCCTTCTTCCTTaGAACATCCACTTGATAACC +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGLLLP*NIHLIT
Trigger: GGTTATCAAGTGGATGTTCAAAGGAAGAAGGAGGCC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTATCTTAATGTGGCCCTaGTCATCTATCACTGGTTTT +
Preference number: 5 (lower is better)
Translates to: CFKIFTEQAPGCPWVLDLILMWP*SSITGF
Trigger: AAAACCAGTGATAGATGACAAGGGCCACATTAAGAT...AAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS-3UTR CAA 90 bp CTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTAGAGCACCTTCATTGTaGACCAGAAATGATCATCCT +
Preference number: 5 (lower is better)
Translates to: LTVFQDIHRASTWLSLGLRAPSL*TRNDHP
Trigger: AGGATGATCATTTCTGGTCAACAATGAAGGTGCTCT...AAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS TCA 90 bp AAGGAAGGTCACAGATCTACAACTGAAGTCATTTCTATACAGGATTaGCCACCAATGCTGGCTCCAATAGTACTTGATCCTGAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: KEGHRSTTEVISIQD*PPMLAPIVLDPEEA
Trigger: AGCTTCCTCAGGATCAAGTACTATTGGAGCCAGCATTGGTGGTCAATCCTGTATAGAAATGACTTCAGTTGTAGATCTGTGACCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445310.2
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTTGAGAGGGTTTCTCTaGCTCCCTCATTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLRGFL*LPHSRD
Trigger: GTCGCGGGAATGAGGGAGCAAGAGAAACCCTCTCAA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGTTTGGGGCGTCACTTaGAGAGGGTTTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVVWGVT*RGFLLL
Trigger: GAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAAC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGTTTGGGGCGTCACTTaGAGAGGGTTTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKVWGVT*RGFLLL
Trigger: GAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAAC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAGTAGAAAACTCTTTATaGGCATCCTTTTCCACCAGA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESVENSL*ASFSTR
Trigger: TCTGGTGGAAAAGGATGCCAATAAAGAGTTTTCTAC...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCCCCTTGTTCTTTCTaGGTAGGGCTGCAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSPCSF*VGLQVC
Trigger: GCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTCCCCTTGTTCTTTCTaGGTAGGGCTGCAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSPCSF*VGLQVC
Trigger: GCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTACCTGTTTTTCAACCTaGACCACCCGACCGAGCATA +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLTCFST*TTRPSI
Trigger: TATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGGT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAGTAGGCAGTCCAGCTaGGATTCTATGGACTGTACC +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSRQSS*DSMDCT
Trigger: GGTACAGTCCATAGAATCCAAGCTGGACTGCCTACT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGCTATCCACAGGGCTTaGATAGTCAGATGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSAIHRA*IVRCLF
Trigger: GAACAGACATCTGACTATCAAAGCCCTGTGGATAGC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGGGTGCCGTATTTATTaGGTTTGCAATGGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHGCRIY*VCNGVG
Trigger: ACCAACACCATTGCAAACCAAATAAATACGGCACCC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGTTGGGGCTGCTGGCTaGGGTGCCGTATTTATTTGG +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFVGAAG*GAVFIW
Trigger: CCAAATAAATACGGCACCCAAGCCAGCAGCCCCAAC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGTTGGGGCTGCTGGCTaGGGTGCCGTATTTATTTGG +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAVGAAG*GAVFIW
Trigger: CCAAATAAATACGGCACCCAAGCCAGCAGCCCCAAC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGGATCTGTAAAGTTGTaGGGGCTGCTGGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRGSVKL*GLLAWV
Trigger: CACCCAAGCCAGCAGCCCCAACAACTTTACAGATCC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGGATCTGTAAAGTTGTaGGGGCTGCTGGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAGSVKL*GLLAWV
Trigger: CACCCAAGCCAGCAGCCCCAACAACTTTACAGATCC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGTGGGATCTGTAAAGTaGTTGGGGCTGCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAVGSVK*LGLLAW
Trigger: CCAAGCCAGCAGCCCCAACAACTTTACAGATCCCAC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGTGGGATCTGTAAAGTaGTTGGGGCTGCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILVGSVK*LGLLAW
Trigger: CCAAGCCAGCAGCCCCAACAACTTTACAGATCCCAC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGCTCATAGAACGGTCCTaGGTGAGATTTGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLIERS*VRFDCA
Trigger: TGCACAGTCAAATCTCACCAAGGACCGTTCTATGAG...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTGCACAGACAAAGATTaGCCCAAGTCCTTCGGCACC +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVCTDKD*PKSFGT
Trigger: GGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTGGGGTAAAAATCTaGGCTGCCTCTGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLFGVKI*AASGAT
Trigger: AGTGGCTCCAGAGGCAGCCAAGATTTTTACCCCAAA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCATCAGTTATAAACAATTaGGATTCCCTCCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESSVINN*DSLHLG
Trigger: CCCCAAATGGAGGGAATCCAAATTGTTTATAACTGA...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTGGGGTTGGCGCCATaGCAGAGAAACCAGTCCAAT +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLGLAP*QRNQSN
Trigger: ATTGGACTGGTTTCTCTGCAATGGCGCCAACCCCAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCCCTGCTCATTCTGCTaGGCTGCTGGAGAAGTACTT +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVPCSFC*AAGEVL
Trigger: AAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACCCTGCTCATTCTGCTaGGCTGCTGGAGAAGTACTT +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKPCSFC*AAGEVL
Trigger: AAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGGCCTCCTTCTTCCTTaGAACATCCACTTGATAACC +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSGLLLP*NIHLIT
Trigger: GGTTATCAAGTGGATGTTCAAAGGAAGAAGGAGGCC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAGTGCTCAGCTAAATaGTGCTTCAAGACATCATTA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESQCSAK*CFKTSL
Trigger: TAATGATGTCTTGAAGCACAATTTAGCTGAGCACTG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATAGAAGGCAGACACACTaGTACTCAGAAAGCATATGG +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHRRQTH*YSESIW
Trigger: CCATATGCTTTCTGAGTACAAGTGTGTCTGCCTTCT...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATGATCAACCCTACATGTaGAAGAAGGCAGACACACTT +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHDQPYM*KKADTL
Trigger: AAGTGTGTCTGCCTTCTTCAACATGTAGGGTTGATC...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGAAAGAGCACCTTCATaGTTGACCAGAAATGATCAT +
Preference number: 5 (lower is better)
Translates to: LTVFQDIHRASTWLSLGLERAPS*LTRNDH
Trigger: ATGATCATTTCTGGTCAACAATGAAGGTGCTCTTTC...AAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS TCA 90 bp GGTAATGTGGTGTTGAAGAGAACAAGCCCTGGGGTCTATCTGATTTaGATCCTGATTCCTCTATTTATGGCCTGGAGAAAGTTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: GNVVLKRTSPGVYLI*ILIPLFMAWRKFLD
Trigger: ATCAAGAAACTTTCTCCAGGCCATAAATAGAGGAATCAGGATTCAAATCAGATAGACCCCAGGGCTTGTTCTCTTCAACACCACATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445310.2
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGTTTGGGGCGTCACTTaGAGAGGGTTTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRVWGVT*RGFLLL
Trigger: GAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAAC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGTTTGGGGCGTCACTTaGAGAGGGTTTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILVWGVT*RGFLLL
Trigger: GAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAAC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGAAACCTCAGTCTTCCTaGCCATCCTCTATATCGACA +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSKPQSS*PSSIST
Trigger: TGTCGATATAGAGGATGGCAAGGAAGACTGAGGTTT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGAGTGTGGCTTCCAGGTaGCAATGGAAACAGATTTCT +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSVASR*QWKQIS
Trigger: AGAAATCTGTTTCCATTGCAACCTGGAAGCCACACT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAGTAGGCAGTCCAGCTaGGATTCTATGGACTGTACC +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSRQSS*DSMDCT
Trigger: GGTACAGTCCATAGAATCCAAGCTGGACTGCCTACT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGCTATCCACAGGGCTTaGATAGTCAGATGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGAIHRA*IVRCLF
Trigger: GAACAGACATCTGACTATCAAAGCCCTGTGGATAGC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAGGCCTCTCGAGATGTaGGCACTAGTTGATCTGGAT +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVRPLEM*ALVDLD
Trigger: ATCCAGATCAACTAGTGCCAACATCTCGAGAGGCCT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAGGCCTCTCGAGATGTaGGCACTAGTTGATCTGGAT +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKRPLEM*ALVDLD
Trigger: ATCCAGATCAACTAGTGCCAACATCTCGAGAGGCCT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATGGCACCTGTGTTGCTaGACTGTGCATAGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAWHLCC*TVHSRA
Trigger: AGCCCTACTATGCACAGTCAAGCAACACAGGTGCCA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTGGCACCTGTGTTGCTaGACTGTGCATAGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILWHLCC*TVHSRA
Trigger: AGCCCTACTATGCACAGTCAAGCAACACAGGTGCCA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTGGCACCTGTGTTGCTaGACTGTGCATAGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRWHLCC*TVHSRA
Trigger: AGCCCTACTATGCACAGTCAAGCAACACAGGTGCCA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGGGTGCCGTATTTATTaGGTTTGCAATGGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSGCRIY*VCNGVG
Trigger: ACCAACACCATTGCAAACCAAATAAATACGGCACCC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCTCATAGAACGGTCCTaGGTGAGATTTGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLLIERS*VRFDCA
Trigger: TGCACAGTCAAATCTCACCAAGGACCGTTCTATGAG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCGACCTGATCAGGTTTaGCACAGACAAAGATTTGCC +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLRPDQV*HRQRFA
Trigger: GGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTTTGGGGTAAAAATCTaGGCTGCCTCTGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVFGVKI*AASGAT
Trigger: AGTGGCTCCAGAGGCAGCCAAGATTTTTACCCCAAA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATTTGGGGTAAAAATCTaGGCTGCCTCTGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKFGVKI*AASGAT
Trigger: AGTGGCTCCAGAGGCAGCCAAGATTTTTACCCCAAA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCTAAATGACCTAAACTaGACATATTCATACACCCCA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNLNDLN*TYSYTP
Trigger: TGGGGTGTATGAATATGTCAAGTTTAGGTCATTTAG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCCCTCTCATTGCCCTTaGAGGGGGAAGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVPSHCP*RGKSFS
Trigger: AGAAAATGACTTCCCCCTCAAAGGGCAATGAGAGGG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCAAGCAGTCAGCATTGCTaGCTTTCTGATAAATACATT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESSSQHC*LSDKYI
Trigger: AATGTATTTATCAGAAAGCAAGCAATGCTGACTGCT...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTTGAATGTCATTACGTaGGCTGAAGTTCTGGTGACC +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSLNVIT*AEVLVT
Trigger: GGTCACCAGAACTTCAGCCAACGTAATGACATTCAA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAAACAACTTCCTTTCTaGAGTCCTCCTGTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGKQLPF*SPPVAR
Trigger: CCTAGCCACAGGAGGACTCAAGAAAGGAAGTTGTTT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACCCTGCTCATTCTGCTaGGCTGCTGGAGAAGTACTT +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAPCSFC*AAGEVL
Trigger: AAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCCCTGCTCATTCTGCTaGGCTGCTGGAGAAGTACTT +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRPCSFC*AAGEVL
Trigger: AAGTACTTCTCCAGCAGCCAAGCAGAATGAGCAGGG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGGATCAACCCTACATGTaGAAGAAGGCAGACACACTT +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSDQPYM*KKADTL
Trigger: AAGTGTGTCTGCCTTCTTCAACATGTAGGGTTGATC...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACACTTTAATGATAGCTaGAAATGGATATGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCMQHSCKGESHFNDS*KWIWCS
Trigger: GGAACACCATATCCATTTCAAGCTATCATTAAAGTG...TGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTATGCAACATTCTTGCAAGGGGGAATCACAACCACTTTAATGATAGCTaGAAATGGATATGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCNILARGNHNHFNDS*KWIWCS
Trigger: GGAACACCATATCCATTTCAAGCTATCATTAAAGTG...GTTGTGATTCCCCCTTGCAAGAATGTTGCATACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATAAGCAGTGGAGAATGACAGTCCCATaGATCTTAATGTGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: EDFEITFNRNLSKEDKQWRMTVP*ILMWPL
Trigger: CAAGGGCCACATTAAGATCAATGGGACTGTCATTCT...CCACTGCTTATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS TCA 90 bp AGGAAACGGAGACTTCTGAGTGCAGACGTGGCAAAAATATTACCCTaGGTTTTTGCAGAAACAACTGCTATTGAAGCGATAAGAACAATG +
Preference number: 5 (lower is better)
Translates to: RKRRLLSADVAKILP*VFAETTAIEAIRTM
Trigger: CATTGTTCTTATCGCTTCAATAGCAGTTGTTTCTGCAAAAACTCAGGGTAATATTTTTGCCACGTCTGCACTCAGAAGTCTCCGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAACCTGTTTTTCAACCTaGACCACCCGACCGAGCATA +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLATCFST*TTRPSI
Trigger: TATGCTCGGTCGGGTGGTCAAGGTTGAAAAACAGGT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAGTAGGCAGTCCAGCTaGGATTCTATGGACTGTACC +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSRQSS*DSMDCT
Trigger: GGTACAGTCCATAGAATCCAAGCTGGACTGCCTACT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGTAGGCAGTCCAGCTaGGATTCTATGGACTGTACC +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLASRQSS*DSMDCT
Trigger: GGTACAGTCCATAGAATCCAAGCTGGACTGCCTACT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAGTAGGCAGTCCAGCTaGGATTCTATGGACTGTACC +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSRQSS*DSMDCT
Trigger: GGTACAGTCCATAGAATCCAAGCTGGACTGCCTACT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGCTATCCACAGGGCTTaGATAGTCAGATGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVAIHRA*IVRCLF
Trigger: GAACAGACATCTGACTATCAAAGCCCTGTGGATAGC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGCTATCCACAGGGCTTaGATAGTCAGATGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKAIHRA*IVRCLF
Trigger: GAACAGACATCTGACTATCAAAGCCCTGTGGATAGC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGGCCTCTCGAGATGTaGGCACTAGTTGATCTGGAT +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARPLEM*ALVDLD
Trigger: ATCCAGATCAACTAGTGCCAACATCTCGAGAGGCCT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAGGCCTCTCGAGATGTaGGCACTAGTTGATCTGGAT +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRRPLEM*ALVDLD
Trigger: ATCCAGATCAACTAGTGCCAACATCTCGAGAGGCCT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGGGTGCCGTATTTATTaGGTTTGCAATGGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGGCRIY*VCNGVG
Trigger: ACCAACACCATTGCAAACCAAATAAATACGGCACCC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATTTGGGGTAAAAATCTaGGCTGCCTCTGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAFGVKI*AASGAT
Trigger: AGTGGCTCCAGAGGCAGCCAAGATTTTTACCCCAAA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATTCAGTTATAAACAATTaGGATTCCCTCCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHSVINN*DSLHLG
Trigger: CCCCAAATGGAGGGAATCCAAATTGTTTATAACTGA...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCCCTCTCATTGCCCTTaGAGGGGGAAGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFPSHCP*RGKSFS
Trigger: AGAAAATGACTTCCCCCTCAAAGGGCAATGAGAGGG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCCTCTCATTGCCCTTaGAGGGGGAAGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPSHCP*RGKSFS
Trigger: AGAAAATGACTTCCCCCTCAAAGGGCAATGAGAGGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACCCTCTCATTGCCCTTaGAGGGGGAAGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAPSHCP*RGKSFS
Trigger: AGAAAATGACTTCCCCCTCAAAGGGCAATGAGAGGG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATTGAATGTCATTACGTaGGCTGAAGTTCTGGTGACC +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGLNVIT*AEVLVT
Trigger: GGTCACCAGAACTTCAGCCAACGTAATGACATTCAA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAAACAACTTCCTTTCTaGAGTCCTCCTGTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVKQLPF*SPPVAR
Trigger: CCTAGCCACAGGAGGACTCAAGAAAGGAAGTTGTTT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAAACAACTTCCTTTCTaGAGTCCTCCTGTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKKQLPF*SPPVAR
Trigger: CCTAGCCACAGGAGGACTCAAGAAAGGAAGTTGTTT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGGCCTCCTTCTTCCTTaGAACATCCACTTGATAACC +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVGLLLP*NIHLIT
Trigger: GGTTATCAAGTGGATGTTCAAAGGAAGAAGGAGGCC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAGTGTATGCAACATTCTaGCAAGGGGGAATCACAACT +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGVYATF*QGGITT
Trigger: AGTTGTGATTCCCCCTTGCAAGAATGTTGCATACAC...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCAGTGCTCAGCTAAATaGTGCTTCAAGACATCATTA +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHQCSAK*CFKTSL
Trigger: TAATGATGTCTTGAAGCACAATTTAGCTGAGCACTG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAAGAAGGCAGACACACTaGTACTCAGAAAGCATATGG +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGRRQTH*YSESIW
Trigger: CCATATGCTTTCTGAGTACAAGTGTGTCTGCCTTCT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGATCAACCCTACATGTaGAAGAAGGCAGACACACTT +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLDQPYM*KKADTL
Trigger: AAGTGTGTCTGCCTTCTTCAACATGTAGGGTTGATC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TTATCATTGGAAGACTTCGAAATAACTTTCAACAGGAACCTCTCTAAGGAAGATGCAGTGGTCTCTGATTaGCTGGTAGATGGAGTGTGT +
Preference number: 5 (lower is better)
Translates to: LSLEDFEITFNRNLSKEDAVVSD*LVDGVC
Trigger: ACACACTCCATCTACCAGCAAATCAGAGACCACTGC...ATCTTCCTTAGAGAGGTTCCTGTTGAAAGTTATTTCGAAGTCTTCCAATGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS TCA 90 bp TCTCATGTTCTGCTGTTATTTTCTCTCGGCTCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAATTTGATCAACACGTGTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: SHVLLLFSLGSSYLM*FALFQEFDQHVFEG
Trigger: GCCTTCAAACACGTGTTGATCAAATTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGAGAGAAAATAACAGCAGAACATGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 90 bp TGTGGTCTCATGTTCTGCTGTTATTTTCTCTCGGCTCTTCTTATCTaGTGTGATTTGCCCTTTTCCAAGAATTTGATCAACACGTGTTTG +
Preference number: 5 (lower is better)
Translates to: CGLMFCCYFLSALLI*CDLPFSKNLINTCL
Trigger: CAAACACGTGTTGATCAAATTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGAGAGAAAATAACAGCAGAACATGAGACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAAACCTCAGTCTTCCTaGCCATCCTCTATATCGACA +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKKPQSS*PSSIST
Trigger: TGTCGATATAGAGGATGGCAAGGAAGACTGAGGTTT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAAGTGTGGCTTCCAGGTaGCAATGGAAACAGATTTCT +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSVASR*QWKQIS
Trigger: AGAAATCTGTTTCCATTGCAACCTGGAAGCCACACT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATACAGAACTTACTGCTaGATGCTTCCCCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGYRTYC*MLPLVL
Trigger: AAGAACAAGGGGAAGCATCAAGCAGTAAGTTCTGTA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342056.6
ENST00000355635.7
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGCTATCCACAGGGCTTaGATAGTCAGATGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILAIHRA*IVRCLF
Trigger: GAACAGACATCTGACTATCAAAGCCCTGTGGATAGC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCGCTATCCACAGGGCTTaGATAGTCAGATGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFAIHRA*IVRCLF
Trigger: GAACAGACATCTGACTATCAAAGCCCTGTGGATAGC...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCCCGTATTTATTTGGTTaGCAATGGTGTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVPYLFG*QWCWWL
Trigger: CAGCCACCAACACCATTGCAAACCAAATAAATACGG...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAACCGTATTTATTTGGTTaGCAATGGTGTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKPYLFG*QWCWWL
Trigger: CAGCCACCAACACCATTGCAAACCAAATAAATACGG...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTCATAGAACGGTCCTaGGTGAGATTTGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLIERS*VRFDCA
Trigger: TGCACAGTCAAATCTCACCAAGGACCGTTCTATGAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCTCATAGAACGGTCCTaGGTGAGATTTGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLIERS*VRFDCA
Trigger: TGCACAGTCAAATCTCACCAAGGACCGTTCTATGAG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACGACCTGATCAGGTTTaGCACAGACAAAGATTTGCC +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARPDQV*HRQRFA
Trigger: GGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCGACCTGATCAGGTTTaGCACAGACAAAGATTTGCC +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRRPDQV*HRQRFA
Trigger: GGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGTCAGTTATAAACAATTaGGATTCCCTCCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSVINN*DSLHLG
Trigger: CCCCAAATGGAGGGAATCCAAATTGTTTATAACTGA...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGAAACAACTTCCTTTCTaGAGTCCTCCTGTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILKQLPF*SPPVAR
Trigger: CCTAGCCACAGGAGGACTCAAGAAAGGAAGTTGTTT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGTGTATGCAACATTCTaGCAAGGGGGAATCACAACT +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVVYATF*QGGITT
Trigger: AGTTGTGATTCCCCCTTGCAAGAATGTTGCATACAC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCAGAAGGCAGACACACTaGTACTCAGAAAGCATATGG +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVRRQTH*YSESIW
Trigger: CCATATGCTTTCTGAGTACAAGTGTGTCTGCCTTCT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCGATCAACCCTACATGTaGAAGAAGGCAGACACACTT +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVDQPYM*KKADTL
Trigger: AAGTGTGTCTGCCTTCTTCAACATGTAGGGTTGATC...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TCCTACCTGTATGTCAGCGAAATGAGAATAGCTTCTCACACTTGCCCTTTACATCACTTTAATGATAGCTaGAAATGGATATGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: SYLYVSEMRIASHTCPLHHFNDS*KWIWCS
Trigger: GGAACACCATATCCATTTCAAGCTATCATTAAAGTG...ATGTAAAGGGCAAGTGTGAGAAGCTATTCTCATTTCGCTGACATACAGGTAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTGTAGAAAACTCTTTATaGGCATCCTTTTCCACCAGA +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLVENSL*ASFSTR
Trigger: TCTGGTGGAAAAGGATGCCAATAAAGAGTTTTCTAC...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGAGTGTGGCTTCCAGGTaGCAATGGAAACAGATTTCT +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILSVASR*QWKQIS
Trigger: AGAAATCTGTTTCCATTGCAACCTGGAAGCCACACT...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAGTGTGGCTTCCAGGTaGCAATGGAAACAGATTTCT +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSVASR*QWKQIS
Trigger: AGAAATCTGTTTCCATTGCAACCTGGAAGCCACACT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGAGTGTGGCTTCCAGGTaGCAATGGAAACAGATTTCT +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSVASR*QWKQIS
Trigger: AGAAATCTGTTTCCATTGCAACCTGGAAGCCACACT...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACCGTATTTATTTGGTTaGCAATGGTGTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAPYLFG*QWCWWL
Trigger: CAGCCACCAACACCATTGCAAACCAAATAAATACGG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCCGTATTTATTTGGTTaGCAATGGTGTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRPYLFG*QWCWWL
Trigger: CAGCCACCAACACCATTGCAAACCAAATAAATACGG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCCGTATTTATTTGGTTaGCAATGGTGTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILPYLFG*QWCWWL
Trigger: CAGCCACCAACACCATTGCAAACCAAATAAATACGG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGGGTGCCGTATTTATTaGGTTTGCAATGGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAGCRIY*VCNGVG
Trigger: ACCAACACCATTGCAAACCAAATAAATACGGCACCC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATCAGTTATAAACAATTaGGATTCCCTCCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGSVINN*DSLHLG
Trigger: CCCCAAATGGAGGGAATCCAAATTGTTTATAACTGA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGCTTTCGAGCAGTCAGCATTGCTaGCTTTCTGATAAATACATT +
Preference number: 5 (lower is better)
Translates to: AFHVLPDSCNFNFLEGLSSSQHC*LSDKYI
Trigger: AATGTATTTATCAGAAAGCAAGCAATGCTGACTGCT...CGAAAGCCCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATTGAATGTCATTACGTaGGCTGAAGTTCTGGTGACC +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLALNVIT*AEVLVT
Trigger: GGTCACCAGAACTTCAGCCAACGTAATGACATTCAA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGTGTATGCAACATTCTaGCAAGGGGGAATCACAACT +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRVYATF*QGGITT
Trigger: AGTTGTGATTCCCCCTTGCAAGAATGTTGCATACAC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGGTGTATGCAACATTCTaGCAAGGGGGAATCACAACT +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILVYATF*QGGITT
Trigger: AGTTGTGATTCCCCCTTGCAAGAATGTTGCATACAC...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGAAGGCAGACACACTaGTACTCAGAAAGCATATGG +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLARRQTH*YSESIW
Trigger: CCATATGCTTTCTGAGTACAAGTGTGTCTGCCTTCT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGAATCATCCTTACAGTTTaGCTTTGCAAATGGCATGAG +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGIILTV*LCKWHE
Trigger: CTCATGCCATTTGCAAAGCAAAACTGTAAGGATGAT...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTATCATCCTTACAGTTTaGCTTTGCAAATGGCATGAG +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLIILTV*LCKWHE
Trigger: CTCATGCCATTTGCAAAGCAAAACTGTAAGGATGAT...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTTAGCTTCTGACTGCTaGATGCTTCCCCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLASDC*MLPLVL
Trigger: AAGAACAAGGGGAAGCATCAAGCAGTCAGAAGCTAA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355194.8
ENST00000370398.6
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGTTAGCTTCTGACTGCTaGATGCTTCCCCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILLASDC*MLPLVL
Trigger: AAGAACAAGGGGAAGCATCAAGCAGTCAGAAGCTAA...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355194.8
ENST00000370398.6
CDS TCA 90 bp TTGATCATTAAATCTAAATCTGTCATATTCTCCAATGGATTTCTTTaGGGTCAGGTCCACATCGTTCCTTTCTTTGAACCACCAGCATCT +
Preference number: 5 (lower is better)
Translates to: LIIKSKSVIFSNGFL*GQVHIVPFFEPPAS
Trigger: AGATGCTGGTGGTTCAAAGAAAGGAACGATGTGGACCTGACCTCAAAGAAATCCATTGGAGAATATGACAGATTTAGATTTAATGATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445310.2
CDS-3UTR CAA 90 bp CCAAGTGGGATGCGAAGAGGAAGCTTTAAAAATTTCCATGTTTATCAAAAGGGATATTACCCTGAGTTTTaGCAGAAACAACTGCTATTG +
Preference number: 5 (lower is better)
Translates to: PSGMRRGSFKNFHVYQKGYYPEF*QKQLLL
Trigger: CAATAGCAGTTGTTTCTGCAAAAACTCAGGGTAATA...TCCCTTTTGATAAACATGGAAATTTTTAAAGCTTCCTCTTCGCATCCCACTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTATTACCCTGAGTTTTaGCAGAAACAACTGCTATTG +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLYYPEF*QKQLLL
Trigger: CAATAGCAGTTGTTTCTGCAAAAACTCAGGGTAATA...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAGTAGAAAACTCTTTATaGGCATCCTTTTCCACCAGA +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKVENSL*ASFSTR
Trigger: TCTGGTGGAAAAGGATGCCAATAAAGAGTTTTCTAC...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAATCAGTTATAAACAATTaGGATTCCCTCCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKSVINN*DSLHLG
Trigger: CCCCAAATGGAGGGAATCCAAATTGTTTATAACTGA...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AACGGGCTTATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTCTAAATGACCTAAACTaGACATATTCATACACCCCA +
Preference number: 5 (lower is better)
Translates to: NGLINCLSCSSRFLQFQLLNDLN*TYSYTP
Trigger: TGGGGTGTATGAATATGTCAAGTTTAGGTCATTTAG...AAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTATAAGCCCGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCATCATCCTTACAGTTTaGCTTTGCAAATGGCATGAG +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVIILTV*LCKWHE
Trigger: CTCATGCCATTTGCAAAGCAAAACTGTAAGGATGAT...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AACAACATGAAAATGATGTGCAAAATTGCTTGCCACAGCGCTAAATCACCAAAAATCATCCTTACAGTTTaGCTTTGCAAATGGCATGAG +
Preference number: 5 (lower is better)
Translates to: NNMKMMCKIACHSAKSPKIILTV*LCKWHE
Trigger: CTCATGCCATTTGCAAAGCAAAACTGTAAGGATGAT...TTTTGGTGATTTAGCGCTGTGGCAAGCAATTTTGCACATCATTTTCATGTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTTCTCAGGCTTTTTAACTCAAGGTACATTACTAAATGAGTGGGTTAATGTCTATTACCCTGAGTTTTaGCAGAAACAACTGCTATTG +
Preference number: 5 (lower is better)
Translates to: GFSGFLTQGTLLNEWVNVYYPEF*QKQLLL
Trigger: CAATAGCAGTTGTTTCTGCAAAAACTCAGGGTAATA...GACATTAACCCACTCATTTAGTAATGTACCTTGAGTTAAAAAGCCTGAGAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAGTAGAAAACTCTTTATaGGCATCCTTTTCCACCAGA +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAVENSL*ASFSTR
Trigger: TCTGGTGGAAAAGGATGCCAATAAAGAGTTTTCTAC...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGGTAGAAAACTCTTTATaGGCATCCTTTTCCACCAGA +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRVENSL*ASFSTR
Trigger: TCTGGTGGAAAAGGATGCCAATAAAGAGTTTTCTAC...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATCAGTTATAAACAATTaGGATTCCCTCCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLASVINN*DSLHLG
Trigger: CCCCAAATGGAGGGAATCCAAATTGTTTATAACTGA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGTCAGTTATAAACAATTaGGATTCCCTCCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRSVINN*DSLHLG
Trigger: CCCCAAATGGAGGGAATCCAAATTGTTTATAACTGA...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACAGTGCTCAGCTAAATaGTGCTTCAAGACATCATTA +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAQCSAK*CFKTSL
Trigger: TAATGATGTCTTGAAGCACAATTTAGCTGAGCACTG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCAGTGCTCAGCTAAATaGTGCTTCAAGACATCATTA +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRQCSAK*CFKTSL
Trigger: TAATGATGTCTTGAAGCACAATTTAGCTGAGCACTG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCATCATCCTTACAGTTTaGCTTTGCAAATGGCATGAG +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFIILTV*LCKWHE
Trigger: CTCATGCCATTTGCAAAGCAAAACTGTAAGGATGAT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCTATTACCCTGAGTTTTaGCAGAAACAACTGCTATTG +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFYYPEF*QKQLLL
Trigger: CAATAGCAGTTGTTTCTGCAAAAACTCAGGGTAATA...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCATATTACCCTGAGTTTTaGCAGAAACAACTGCTATTG +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAYYPEF*QKQLLL
Trigger: CAATAGCAGTTGTTTCTGCAAAAACTCAGGGTAATA...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCCTAAATGACCTAAACTaGACATATTCATACACCCCA +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFLNDLN*TYSYTP
Trigger: TGGGGTGTATGAATATGTCAAGTTTAGGTCATTTAG...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp ATAAACTGCCTTTCATGTTCTTCCCGATTCTTGCAATTTCAACTTTTTAGAAGGCTAAATGACCTAAACTaGACATATTCATACACCCCA +
Preference number: 5 (lower is better)
Translates to: INCLSCSSRFLQFQLFRRLNDLN*TYSYTP
Trigger: TGGGGTGTATGAATATGTCAAGTTTAGGTCATTTAG...CCTTCTAAAAAGTTGAAATTGCAAGAATCGGGAAGAACATGAAAGGCAGTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCAAGCAGTCAGCATTGCTaGCTTTCTGATAAATACATT +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLASSQHC*LSDKYI
Trigger: AATGTATTTATCAGAAAGCAAGCAATGCTGACTGCT...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp TGCCTGATTTCCTCCTCTCTAGTAGACTTATTTTACTTGCAAATTAAGAACTTCAGCAGTCAGCATTGCTaGCTTTCTGATAAATACATT +
Preference number: 5 (lower is better)
Translates to: CLISSSLVDLFYLQIKNFSSQHC*LSDKYI
Trigger: AATGTATTTATCAGAAAGCAAGCAATGCTGACTGCT...GAAGTTCTTAATTTGCAAGTAAAATAAGTCTACTAGAGAGGAGGAAATCAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp AAGCAGCCATTTCTATTATTCCCCAATTCTGCTTTAGTTGATACCTTATTAGCACACTTTAATGATAGCTaGAAATGGATATGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: KQPFLLFPNSALVDTLLAHFNDS*KWIWCS
Trigger: GGAACACCATATCCATTTCAAGCTATCATTAAAGTG...TGCTAATAAGGTATCAACTAAAGCAGAATTGGGGAATAATAGAAATGGCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS-3UTR CAA 90 bp GGTTGGCAAATATATCTTGAAATAAGCAGCCATTTCTATTATTCCCCAATTCTGCACTTTAATGATAGCTaGAAATGGATATGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: GWQIYLEISSHFYYSPILHFNDS*KWIWCS
Trigger: GGAACACCATATCCATTTCAAGCTATCATTAAAGTG...CAGAATTGGGGAATAATAGAAATGGCTGCTTATTTCAAGATATATTTGCCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
CDS CCA 72 bp CGCCGCCCTCCTCTCCTCCCGCGTGGTGGCGGGGCATaGCATCACCACGGGCACCGCGAGGGGGCCGCCAGC +
Preference number: 6 (lower is better)
Translates to: RRPPLLPRGGGA*HHHGHREGAAS
Trigger: GCTGGCGGCCCCCTCGCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGAGGGCGGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS CCA 72 bp AGCCCGGCGGCGCCGCCCTCCTCTCCTCCCGCGTGGTaGCGGGGCATGGCATCACCACGGGCACCGCGAGGG +
Preference number: 6 (lower is better)
Translates to: SPAAPPSSPPAW*RGMASPRAPRG
Trigger: CCCTCGCGGTGCCCGTGGTGATGCCATGCCCCGCCACCACGCGGGAGGAGAGGAGGGCGGCGCCGCCGGGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS CCA 72 bp CCGCGCGGGTGCCCAGCAGTAGCAGGCCGTCGCCCCTaGCGGCTGCCGAGTTCAGCAGCACCCTGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: PRGCPAVAGRRP*RLPSSAAPCPG
Trigger: GCCGGGGCAGGGTGCTGCTGAACTCGGCAGCCGCCAGGGGCGACGGCCTGCTACTGCTGGGCACCCGCGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000445310.2
ENST00000628967.2
ENST00000629977.2
CDS GCA 72 bp CAAACCGCCCGGGCTTCGGGGCGGGAAAGGAGGGGCTaGAGAGGAGGCCGAGGAGTCCCAATTTCTAACAGC +
Preference number: 6 (lower is better)
Translates to: QTARASGRERRG*RGGRGVPISNS
Trigger: GCTGTTAGAAATTGGGACTCCTCGGCCTCCTCTGCAGCCCCTCCTTTCCCGCCCCGAAGCCCGGGCGGTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS TCA 72 bp GCACGTTGTACAGGTAGTTCTGCACCCGCCGGTACTTaGCGTTGCGCCGGCAGCTCTGGCTACTCGTGTAAG +
Preference number: 6 (lower is better)
Translates to: ARCTGSSAPAGT*RCAGSSGYSCK
Trigger: CTTACACGAGTAGCCAGAGCTGCCGGCGCAACGTCAAGTACCGGCGGGTGCAGAACTACCTGTACAACGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000445310.2
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp AGCTCTTCTGCACTTTGGTGGGACTGCCCTCGGCTGTaGTGTCGGTGCTTGGGGACCTCCTGTCACCTACTG +
Preference number: 6 (lower is better)
Translates to: SSSALWWDCPRL*CRCLGTSCHLL
Trigger: CAGTAGGTGACAGGAGGTCCCCAAGCACCGACATCACAGCCGAGGGCAGTCCCACCAAAGTGCAGAAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000427928.1
ENST00000629977.2
CDS TCA 72 bp TGTGATGTCGGTGCTTGGGGACCTCCTGTCACCTACTaGGGCTTGTCGGCTCTTAATACTCTGGCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: CDVGAWGPPVTY*GLSALNTLAPG
Trigger: CCCAGGGGCCAGAGTATTAAGAGCCGACAAGCCTCAGTAGGTGACAGGAGGTCCCCAAGCACCGACATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000427928.1
ENST00000629977.2
CDS CCA 72 bp CTGTCACCTACTGAGGCTTGTCGGCTCTTAATACTCTaGCCCCTGGGGCTAGCCATGCGCACTCGCTCCTTA +
Preference number: 6 (lower is better)
Translates to: LSPTEACRLLIL*PLGLAMRTRSL
Trigger: TAAGGAGCGAGTGCGCATGGCTAGCCCCAGGGGCCAGAGTATTAAGAGCCGACAAGCCTCAGTAGGTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000427928.1
ENST00000629977.2
CDS TCA 72 bp TGTCAGCATCTATCACTGGTTTTGGCTGAGAACTTTTaGGGCGCAGCGAGGGCCGGAAGCGGGTTCGGTCGT +
Preference number: 6 (lower is better)
Translates to: CQHLSLVLAENF*GAARAGSGFGR
Trigger: ACGACCGAACCCGCTTCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGATGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000629977.2
CDS TCA 72 bp CCTTGTCATCTATCACTGGTTTTGGCTGAGAACTTTTaGGGCGCAGCGAGGGCCGGAAGCGGGTTCGGTCGT +
Preference number: 6 (lower is better)
Translates to: PCHLSLVLAENF*GAARAGSGFGR
Trigger: ACGACCGAACCCGCTTCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGATGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS CCA 72 bp CAGTCCTTAGAGAGTCTGATGCAAAGGCAGCTTCCCTaGCAGGCTGCGGTGCGGCATCAAAAGTGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: QSLESLMQRQLP*QAAVRHQKCLS
Trigger: AGACAGACACTTTTGATGCCGCACCGCAGCCTGCCAGGGAAGCTGCCTTTGCATCAGACTCTCTAAGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CAA 90 bp GCTGGGAGAGGAGGTGGGATCTGTAAAGTTGTTGGGGCTGCTGGCTaGGGTGCCGTATTTATTTGGTTTGCAATGGTGTTGGTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: AGRGGGICKVVGAAG*GAVFIWFAMVLVAA
Trigger: GGCAGCCACCAACACCATTGCAAACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAACAACTTTACAGATCCCACCTCCTCTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp TTAATGTGGCCCTTGTCATCTATCACTGGTTTTGGCTaGGAACTTTTGAGGCGCAGCGAGGGCCGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: LMWPLSSITGFG*ELLRRSEGRKR
Trigger: CCGCTTCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGATGACAAGGGCCACATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS GCA 72 bp GCTTCCCCTTGTTCTTTCTTGGTAGGGCTGCAGGTGTaGAAGGCCTTCAAGTGTGGCTTCCAGGTTGCAATG +
Preference number: 6 (lower is better)
Translates to: ASPCSFLVGLQV*KAFKCGFQVAM
Trigger: CATTGCAACCTGGAAGCCACACTTGAAGGCCTTGCACACCTGCAGCCCTACCAAGAAAGAACAAGGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000414165.6
ENST00000628967.2
CDS CCA 72 bp GTTGTTGGGGCTGCTGGCTTGGGTGCCGTATTTATTTaGTTTGCAATGGTGTTGGTGGCTGCCACTGCTGAG +
Preference number: 6 (lower is better)
Translates to: VVGAAGLGAVFI*FAMVLVAATAE
Trigger: CTCAGCAGTGGCAGCCACCAACACCATTGCAAACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CAA 72 bp TTGGGGCTGCTGGCTTGGGTGCCGTATTTATTTGGTTaGCAATGGTGTTGGTGGCTGCCACTGCTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: LGLLAWVPYLFG*QWCWWLPLLSH
Trigger: ATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAAACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp CGAATTCTAAATCCGGACCTGTTTGGGGCGTCACTTTaGGAGGGTTTCTCTTGCTCCCTCATTCCCGCGACT +
Preference number: 6 (lower is better)
Translates to: RILNPDLFGASL*EGFSCSLIPAT
Trigger: AGTCGCGGGAATGAGGGAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAACAGGTCCGGATTTAGAATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS CCA 72 bp CTGCTGGCTTGGGTGCCGTATTTATTTGGTTTGCAATaGTGTTGGTGGCTGCCACTGCTGAGCCATCGCTTT +
Preference number: 6 (lower is better)
Translates to: LLAWVPYLFGLQ*CWWLPLLSHRF
Trigger: AAAGCGATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAAACCAAATAAATACGGCACCCAAGCCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CAA 72 bp TCGAATTCTAAATCCGGACCTGTTTGGGGCGTCACTTaGAGAGGGTTTCTCTTGCTCCCTCATTCCCGCGAC +
Preference number: 6 (lower is better)
Translates to: SNSKSGPVWGVT*RGFLLLPHSRD
Trigger: GTCGCGGGAATGAGGGAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAACAGGTCCGGATTTAGAATTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS CAA 72 bp TCGGTCGACCTGATCAGGTTTTGCACAGACAAAGATTaGCCCAAGTCCTTCGGCACCATGGGACAGACAGAC +
Preference number: 6 (lower is better)
Translates to: SVDLIRFCTDKD*PKSFGTMGQTD
Trigger: GTCTGTCTGTCCCATGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CAA 90 bp CCTTTAGCTTCGAATTCTAAATCCGGACCTGTTTGGGGCGTCACTTaGAGAGGGTTTCTCTTGCTCCCTCATTCCCGCGACTACCACTCC +
Preference number: 6 (lower is better)
Translates to: PLASNSKSGPVWGVT*RGFLLLPHSRDYHS
Trigger: GGAGTGGTAGTCGCGGGAATGAGGGAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAACAGGTCCGGATTTAGAATTCGAAGCTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS CAA 90 bp GTAAAGTTGTTGGGGCTGCTGGCTTGGGTGCCGTATTTATTTGGTTaGCAATGGTGTTGGTGGCTGCCACTGCTGAGCCATCGCTTTGAC +
Preference number: 6 (lower is better)
Translates to: VKLLGLLAWVPYLFG*QWCWWLPLLSHRFD
Trigger: GTCAAAGCGATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAAACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAACAACTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp ACTGATGTAGCTGATGTGAGTAAGTCCTGGCTTGCCTaGCCACATGTCAACACGGAGGAGCAGGGTAGTAGA +
Preference number: 6 (lower is better)
Translates to: TDVADVSKSWLA*PHVNTEEQGSR
Trigger: TCTACTACCCTGCTCCTCCGTGTTGACATGTGGTCAGGCAAGCCAGGACTTACTCACATCAGCTACATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445310.2
CDS CCA 72 bp CTTGGTAGGGCTGCAGGTGTGCAAGGCCTTCAAGTGTaGCTTCCAGGTTGCAATGGAAACAGATTTCTCATC +
Preference number: 6 (lower is better)
Translates to: LGRAAGVQGLQV*LPGCNGNRFLI
Trigger: GATGAGAAATCTGTTTCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTGCACACCTGCAGCCCTACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000414165.6
ENST00000628967.2
CDS CCA 72 bp GCTAAGCGCGTAGAAAGTCTGGGCACTGAACTCATTTaGCGTCAGAATGAACTGCAGGCCTCTCGAGATGTT +
Preference number: 6 (lower is better)
Translates to: AKRVESLGTELI*RQNELQASRDV
Trigger: AACATCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAATGAGTTCAGTGCCCAGACTTTCTACGCGCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 72 bp GCACAGACAAAGATTTGCCCAAGTCCTTCGGCACCATaGGACAGACAGACAACAGAGTTTCTCCTCCCATGT +
Preference number: 6 (lower is better)
Translates to: AQTKICPSPSAP*DRQTTEFLLPC
Trigger: ACATGGGAGGAGAAACTCTGTTGTCTGTCTGTCCCATGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 72 bp GATCTTAATGTGGCCCTTGTCATCTATCACTGGTTTTaGCTGAGAACTTTTGAGGCGCAGCGAGGGCCGGAA +
Preference number: 6 (lower is better)
Translates to: DLNVALVIYHWF*LRTFEAQRGPE
Trigger: TTCCGGCCCTCGCTGCGCCTCAAAAGTTCTCAGCCAAAACCAGTGATAGATGACAAGGGCCACATTAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS CAA 90 bp TTCAGTTCCTCGGTCGACCTGATCAGGTTTTGCACAGACAAAGATTaGCCCAAGTCCTTCGGCACCATGGGACAGACAGACAACAGAGTT +
Preference number: 6 (lower is better)
Translates to: FSSSVDLIRFCTDKD*PKSFGTMGQTDNRV
Trigger: AACTCTGTTGTCTGTCTGTCCCATGGTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCGACCGAGGAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp TATTTGGTTTGCAATGGTGTTGGTGGCTGCCACTGCTaGGCCATCGCTTTGACTAATTGGCACCTGTGTTGC +
Preference number: 6 (lower is better)
Translates to: YLVCNGVGGCHC*AIALTNWHLCC
Trigger: GCAACACAGGTGCCAATTAGTCAAAGCGATGGCTCAGCAGTGGCAGCCACCAACACCATTGCAAACCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 72 bp CAGCCTTTAGCTTCGAATTCTAAATCCGGACCTGTTTaGGGCGTCACTTTGAGAGGGTTTCTCTTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: QPLASNSKSGPV*GVTLRGFLLLP
Trigger: AGGGAGCAAGAGAAACCCTCTCAAAGTGACGCCCCAAACAGGTCCGGATTTAGAATTCGAAGCTAAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
CDS CCA 72 bp TGTGCAAGGCCTTCAAGTGTGGCTTCCAGGTTGCAATaGAAACAGATTTCTCATCAGCTGCGTAACTACGCC +
Preference number: 6 (lower is better)
Translates to: CARPSSVASRLQ*KQISHQLRNYA
Trigger: GGCGTAGTTACGCAGCTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 72 bp GAGGTGGGATCTGTAAAGTTGTTGGGGCTGCTGGCTTaGGTGCCGTATTTATTTGGTTTGCAATGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: EVGSVKLLGLLA*VPYLFGLQWCW
Trigger: CCAACACCATTGCAAACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAACAACTTTACAGATCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 72 bp ATTGGTAGGGCTGCAGGTGTGCAAGGCCTTCAAGTGTaGCTTCCAGGTTGCAATGGAAACAGATTTCTCATC +
Preference number: 6 (lower is better)
Translates to: IGRAAGVQGLQV*LPGCNGNRFLI
Trigger: GATGAGAAATCTGTTTCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTGCACACCTGCAGCCCTACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402622.6
ENST00000403813.6
ENST00000629977.2
CDS CCA 72 bp TATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTaGACCTTTGCTGGTCAGACGTCACAAATACATCAG +
Preference number: 6 (lower is better)
Translates to: YSQSKHLVVPGS*TFAGQTSQIHQ
Trigger: CTGATGTATTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS CAA 72 bp TGCAGGTGTGCAAGGCCTTCAAGTGTGGCTTCCAGGTaGCAATGGAAACAGATTTCTCATCAGCTGCGTAAC +
Preference number: 6 (lower is better)
Translates to: CRCARPSSVASR*QWKQISHQLRN
Trigger: GTTACGCAGCTGATGAGAAATCTGTTTCCATTGCAACCTGGAAGCCACACTTGAAGGCCTTGCACACCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CAA 72 bp GGAGGTGGGATCTGTAAAGTTGTTGGGGCTGCTGGCTaGGGTGCCGTATTTATTTGGTTTGCAATGGTGTTG +
Preference number: 6 (lower is better)
Translates to: GGGICKVVGAAG*GAVFIWFAMVL
Trigger: CAACACCATTGCAAACCAAATAAATACGGCACCCAAGCCAGCAGCCCCAACAACTTTACAGATCCCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CAA 72 bp ACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTaGTCCCTGGGTCTTGGACCTTTGCTGGTCAGACGT +
Preference number: 6 (lower is better)
Translates to: TVFQDIHRASTW*SLGLGPLLVRR
Trigger: ACGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS CAA 90 bp CTGAACTCATTTGGCGTCAGAATGAACTGCAGGCCTCTCGAGATGTaGGCACTAGTTGATCTGGATAAGCAGCCACTGTTTTGTGCGGAA +
Preference number: 6 (lower is better)
Translates to: LNSFGVRMNCRPLEM*ALVDLDKQPLFCAE
Trigger: TTCCGCACAAAACAGTGGCTGCTTATCCAGATCAACTAGTGCCAACATCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAATGAGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CAA 90 bp GATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTTGGACCTTaGCTGGTCAGACGTCACAAATACATCAGAATGACAGTCCCATTG +
Preference number: 6 (lower is better)
Translates to: DIHRASTWLSLGLGP*LVRRHKYIRMTVPL
Trigger: CAATGGGACTGTCATTCTGATGTATTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS TCA 72 bp GCACCATGCGGAGGATCTGTAGGAAACGGAGACTTCTaGGTGCAGACGTGGCAAAAATATTACCCTGAGTTT +
Preference number: 6 (lower is better)
Translates to: APCGGSVGNGDF*VQTWQKYYPEF
Trigger: AAACTCAGGGTAATATTTTTGCCACGTCTGCACTCAGAAGTCTCCGTTTCCTACAGATCCTCCGCATGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp GCCCCCACCATAGGGAACAGGAGTAAGGGAGGAAACTaGGAAGATTACGCAACAATTCCTGACTCCTATAAC +
Preference number: 6 (lower is better)
Translates to: APTIGNRSKGGN*EDYATIPDSYN
Trigger: GTTATAGGAGTCAGGAATTGTTGCGTAATCTTCTCAGTTTCCTCCCTTACTCCTGTTCCCTATGGTGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441538.1
CDS CCA 72 bp TTCAAGATATTCACAGAGCAAGCACCTGGTTGTCCCTaGGTCTTGGACCTTTGCTGGTCAGACGTCACAAAT +
Preference number: 6 (lower is better)
Translates to: FKIFTEQAPGCP*VLDLCWSDVTN
Trigger: ATTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS CAA 72 bp TTTGGCGTCAGAATGAACTGCAGGCCTCTCGAGATGTaGGCACTAGTTGATCTGGATAAGCAGCCACTGTTT +
Preference number: 6 (lower is better)
Translates to: FGVRMNCRPLEM*ALVDLDKQPLF
Trigger: AAACAGTGGCTGCTTATCCAGATCAACTAGTGCCAACATCTCGAGAGGCCTGCAGTTCATTCTGACGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CAA 72 bp ATATTCACAGAGCAAGCACCTGGTTGTCCCTGGGTCTaGGACCTTTGCTGGTCAGACGTCACAAATACATCA +
Preference number: 6 (lower is better)
Translates to: IFTEQAPGCPWV*DLCWSDVTNTS
Trigger: TGATGTATTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS CAA 90 bp ATCCTCCTTACTGTGTTTCAAGATATTCACAGAGCAAGCACCTGGTaGTCCCTGGGTCTTGGACCTTTGCTGGTCAGACGTCACAAATAC +
Preference number: 6 (lower is better)
Translates to: ILLTVFQDIHRASTW*SLGLGPLLVRRHKY
Trigger: GTATTTGTGACGTCTGACCAGCAAAGGTCCAAGACCCAGGGACAACCAGGTGCTTGCTCTGTGAATATCTTGAAACACAGTAAGGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427928.1
CDS TCA 72 bp AGGGCATCTGTACTTTCTCCTGCCTTACAAATGCTCTaGGATGATCGTGACCTTCCAGTCCTTAGAGAGTCT +
Preference number: 6 (lower is better)
Translates to: RASVLSPALQML*DDRDLPVLRES
Trigger: AGACTCTCTAAGGACTGGAAGGTCACGATCATCTCAGAGCATTTGTAAGGCAGGAGAAAGTACAGATGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS GCA 72 bp TTATTACTACAGAACTTATTGGTAGGGCTGCAGGTGTaGAAGGCCTTCAAGTGTGGCTTCCAGGTTGCAATG +
Preference number: 6 (lower is better)
Translates to: LLLQNLLVGLQV*KAFKCGFQVAM
Trigger: CATTGCAACCTGGAAGCCACACTTGAAGGCCTTGCACACCTGCAGCCCTACCAATAAGTTCTGTAGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402622.6
CDS CAA 72 bp TTGTATATTCAGTTCCTCGGTCGACCTGATCAGGTTTaGCACAGACAAAGATTTGCCCAAGTCCTTCGGCAC +
Preference number: 6 (lower is better)
Translates to: LYIQFLGRPDQV*HRQRFAQVLRH
Trigger: GTGCCGAAGGACTTGGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCGACCGAGGAACTGAATATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp GACAATCATCACGAACTCCAGGATCAAGAGGCAACTTaGGGCCAATTTTGTGTGCTCAGGGATGGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: DNHHELQDQEAT*GQFCVLRDGRK
Trigger: TTTTCTACCATCCCTGAGCACACAAAATTGGCCTCAAGTTGCCTCTTGATCCTGGAGTTCGTGATGATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CCA 72 bp AGTGGTGGGGTGAGGTCTTCCACTGATACATCACACTaGCATCCTTTTTCATCATATACATCATCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: SGGVRSSTDTSH*HPFSSYTSSVP
Trigger: TGGCACTGATGATGTATATGATGAAAAAGGATGCCAGTGTGATGTATCAGTGGAAGACCTCACCCCACCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000629977.2
CDS CAA 72 bp TGCGGAACCCGAAAGATCTTTGCTATCCACAGGGCTTaGATAGTCAGATGTCTGTTCACATTCAAAAGGTGG +
Preference number: 6 (lower is better)
Translates to: CGTRKIFAIHRA*IVRCLFTFKRW
Trigger: CCACCTTTTGAATGTGAACAGACATCTGACTATCAAAGCCCTGTGGATAGCAAAGATCTTTCGGGTTCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS CAA 72 bp GATTTCTTTGAGGTCAGGTCCACATCGTTCCTTTCTTaGAACCACCAGCATCTAGCACATTACACGAAAGCG +
Preference number: 6 (lower is better)
Translates to: DFFEVRSTSFLS*NHQHLAHYTKA
Trigger: CGCTTTCGTGTAATGTGCTAGATGCTGGTGGTTCAAAGAAAGGAACGATGTGGACCTGACCTCAAAGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445310.2
CDS TCA 72 bp AAAGCTTTTCCTCATAGAACGGTCCTTGGTGAGATTTaGCTGTGCAACCTGAACATTTTCCTTGGAGGCAAC +
Preference number: 6 (lower is better)
Translates to: KAFPHRTVLGEI*LCNLNIFLGGN
Trigger: GTTGCCTCCAAGGAAAATGTTCAGGTTGCACAGTCAAATCTCACCAAGGACCGTTCTATGAGGAAAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp TCCCTGAAAGTTGTATATTCAGTTCCTCGGTCGACCTaGTCAGGTTTTGCACAGACAAAGATTTGCCCAAGT +
Preference number: 6 (lower is better)
Translates to: SLKVVYSVPRST*SGFAQTKICPS
Trigger: ACTTGGGCAAATCTTTGTCTGTGCAAAACCTGATCAGGTCGACCGAGGAACTGAATATACAACTTTCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp AGACTTCTGAGTGCAGACGTGGCAAAAATATTACCCTaGGTTTTTGCAGAAACAACTGCTATTGAAGCGATA +
Preference number: 6 (lower is better)
Translates to: RLLSADVAKILP*VFAETTAIEAI
Trigger: TATCGCTTCAATAGCAGTTGTTTCTGCAAAAACTCAGGGTAATATTTTTGCCACGTCTGCACTCAGAAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370392.5
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp CTGCTGTTATTTTCTCTCGGCTCTTCTTATCTGATGTaGTTTGCCCTTTTCCAAGAATTTGATCAACACGTG +
Preference number: 6 (lower is better)
Translates to: LLLFSLGSSYLM*FALFQEFDQHV
Trigger: CACGTGTTGATCAAATTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGAGAGAAAATAACAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp ATGTTCTGCTGTTATTTTCTCTCGGCTCTTCTTATCTaGTGTGATTTGCCCTTTTCCAAGAATTTGATCAAC +
Preference number: 6 (lower is better)
Translates to: MFCCYFLSALLI*CDLPFSKNLIN
Trigger: GTTGATCAAATTCTTGGAAAAGGGCAAATCACATCAGATAAGAAGAGCCGAGAGAAAATAACAGCAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342056.6
ENST00000355194.8
ENST00000355635.7
ENST00000370398.6
ENST00000402622.6
ENST00000403813.6
ENST00000414165.6
ENST00000628967.2
ENST00000629977.2
CDS TCA 72 bp AAATCTAAATCTGTCATATTCTCCAATGGATTTCTTTaGGGTCAGGTCCACATCGTTCCTTTCTTTGAACCA +
Preference number: 6 (lower is better)
Translates to: KSKSVIFSNGFL*GQVHIVPFFEP
Trigger: TGGTTCAAAGAAAGGAACGATGTGGACCTGACCTCAAAGAAATCCATTGGAGAATATGACAGATTTAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445310.2