RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNQ3 (Homo sapiens)

Ensembl gene IDs: ENSG00000184156

Ensembl transcript IDs: ENST00000388996.10, ENST00000519445.5, ENST00000519589.1, ENST00000521134.6, ENST00000621976.1, ENST00000638588.1, ENST00000639358.1, ENST00000639496.1

Found 1280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAATCCCATCCCCTGTGGACGACAGAGGCATGGAGCCGCTGGGCGTaGAGGGGTCCGTGTCTGTGTCCGTCTCACCCTCGGCGAGGTACC +
Preference number: 1 (lower is better)
Translates to: KSHPLWTTEAWSRWA*RGPCLCPSHPRRGT
Trigger: GGTACCTCGCCGAGGGTGAGACGGACACAGACACGGACCCCTTCACGCCCAGCGGCTCCATGCCTCTGTCGTCCACAGGGGATGGGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 90 bp TGTCTTCGATGGGGAAGTCATTCCCATAGCCCCTGTCTTCCGCCATaGGGTCACCTGTCCCGGCATCTTCAGAACTCTGCCAGAAAGCGT +
Preference number: 1 (lower is better)
Translates to: CLRWGSHSHSPCLPP*GHLSRHLQNSARKR
Trigger: ACGCTTTCTGGCAGAGTTCTGAAGATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGGGCTATGGGAATGACTTCCCCATCGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 90 bp GTCCTCCTTCTTCTCTGCTTCAGCTGGCGAGGAGGTGCCCTTGGTTaGGTAATACTCCGTGACCTGCACCTGCAACCGTTCCATGTGTTG +
Preference number: 1 (lower is better)
Translates to: VLLLLCFSWRGGALG*VILRDLHLQPFHVL
Trigger: CAACACATGGAACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAGAAGGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR TCA 90 bp CTGCTTCAGCTGGCGAGGAGGTGCCCTTGGTTGGGTAATACTCCGTaGCCTGCACCTGCAACCGTTCCATGTGTTGCATGTGCATATCCA +
Preference number: 1 (lower is better)
Translates to: LLQLARRCPWLGNTP*PAPATVPCVACAYP
Trigger: TGGATATGCACATGCAACACATGGAACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCCTCGCCAGCTGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR TCA 90 bp TCAGGATGGCACAGAGCCGACTTCACCTCTCCAACAGCAAATCTCTaGTCCTTGGCAAAATGGCTGCCCCAAATCTTGCAACTTGGCCAC +
Preference number: 1 (lower is better)
Translates to: SGWHRADFTSPTANL*SLAKWLPQILQLGH
Trigger: GTGGCCAAGTTGCAAGATTTGGGGCAGCCATTTTGCCAAGGATCAGAGATTTGCTGTTGGAGAGGTGAAGTCGGCTCTGTGCCATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 90 bp GACTCAGGAGAACTGAAACATCCTACCACAGGGATTCACAAGGACTaGTGGGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACA +
Preference number: 1 (lower is better)
Translates to: DSGELKHPTTGIHKD*WGALPNSGRFIPRT
Trigger: TGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAATCCCTGTGGTAGGATGTTTCAGTTCTCCTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 90 bp CTGTCCCGGCATCTTCAGAACTCTGCCAGAAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAACGCTCTTTATTGTTTAAGCCAACAG +
Preference number: 1 (lower is better)
Translates to: LSRHLQNSARKRRLS*GRPCGNALYCLSQQ
Trigger: CTGTTGGCTTAAACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTTTCTGGCAGAGTTCTGAAGATGCCGGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 90 bp TTTCAAATCGGAATACCTGTTGTCCTCCTTCTTCTCTGCTTCAGCTaGCGAGGAGGTGCCCTTGGTTGGGTAATACTCCGTGACCTGCAC +
Preference number: 1 (lower is better)
Translates to: FQIGIPVVLLLLCFS*RGGALGWVILRDLH
Trigger: GTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAGAAGGAGGACAACAGGTATTCCGATTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR TCA 90 bp CAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAGCCAG +
Preference number: 1 (lower is better)
Translates to: QPLVSPLVSVGCKSK*TIQSLSTLQGGVSQ
Trigger: CTGGCTGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
3UTR TCA 90 bp ATATGGTTCATTCCTGGGAGATTGCTGGGATGGGAAGGTGAATGCTaGCCCTTTCTGAGACTTCTTGTGTTTTGGCGTGGAGGGAGGTCC +
Preference number: 1 (lower is better)
Translates to: IWFIPGRLLGWEGEC*PFLRLLVFWRGGRS
Trigger: GGACCTCCCTCCACGCCAAAACACAAGAAGTCTCAGAAAGGGTCAGCATTCACCTTCCCATCCCAGCAATCTCCCAGGAATGAACCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 90 bp TCAGGAGAACTGAAACATCCTACCACAGGGATTCACAAGGACTGCTaGGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATG +
Preference number: 1 (lower is better)
Translates to: SGELKHPTTGIHKDC*GALPNSGRFIPRTM
Trigger: CATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAATCCCTGTGGTAGGATGTTTCAGTTCTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp GGGAGAATCCTGGGGTGTGTTTGGCAGCACTGTCCAAAGTACAGTTaGCTTCTTAGGCTGCTGAACAAATTTCTTCTCTTGCCCCAGGAG +
Preference number: 1 (lower is better)
Translates to: GRILGCVWQHCPKYS*LLRLLNKFLLLPQE
Trigger: CTCCTGGGGCAAGAGAAGAAATTTGTTCAGCAGCCTAAGAAGTCAACTGTACTTTGGACAGTGCTGCCAAACACACCCCAGGATTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp TGGCTACATATGGTTCATTCCTGGGAGATTGCTGGGATGGGAAGGTaGATGCTGACCCTTTCTGAGACTTCTTGTGTTTTGGCGTGGAGG +
Preference number: 1 (lower is better)
Translates to: WLHMVHSWEIAGMGR*MLTLSETSCVLAWR
Trigger: CCTCCACGCCAAAACACAAGAAGTCTCAGAAAGGGTCAGCATTCACCTTCCCATCCCAGCAATCTCCCAGGAATGAACCATATGTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR GCA 90 bp AGTGCCTGCATGGCCATGGGATTGTTCTTCATTCCCTTTCTCAACTaGACCCAGCAGCAGTGGTTTTTGCTAGGCCTTTTGAAGACAGCA +
Preference number: 1 (lower is better)
Translates to: SACMAMGLFFIPFLN*TQQQWFLLGLLKTA
Trigger: TGCTGTCTTCAAAAGGCCTAGCAAAAACCACTGCTGCTGGGTGCAGTTGAGAAAGGGAATGAAGAACAATCCCATGGCCATGCAGGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 90 bp GATGATGGTTTTCAAATCGGAATACCTGTTGTCCTCCTTCTTCTCTaGTTCAGCTGGCGAGGAGGTGCCCTTGGTTGGGTAATACTCCGT +
Preference number: 1 (lower is better)
Translates to: DDGFQIGIPVVLLLL*FSWRGGALGWVILR
Trigger: ACGGAGTATTACCCAACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAGAAGGAGGACAACAGGTATTCCGATTTGAAAACCATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 90 bp TGGGCATTAGTGAGGGGCTGCCTGCTGGCTTGTTTAGGGGCCAGTTaGCTCAGTTTGGAATGGTTTAATATCAGCAACAATAGCATTGGG +
Preference number: 1 (lower is better)
Translates to: WALVRGCLLACLGAS*LSLEWFNISNNSIG
Trigger: CCCAATGCTATTGTTGCTGATATTAAACCATTCCAAACTGAGCCAACTGGCCCCTAAACAAGCCAGCAGGCAGCCCCTCACTAATGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 90 bp GCTTTTGGTGAAGGCCCTAGAGTATCTGCTTATGTCCTGACAACATaGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAA +
Preference number: 1 (lower is better)
Translates to: AFGEGPRVSAYVLTT*GFSGTRQEDPSCVQ
Trigger: TTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTCAGGACATAAGCAGATACTCTAGGGCCTTCACCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 90 bp GCAAGAGGACCCAAGCTGTGTTCAAATGAGACCCAGAGATCCCAGTaGAAAGGGACACCTTTGGTAAAACTGGCCACTTTGGGTCATATA +
Preference number: 1 (lower is better)
Translates to: ARGPKLCSNETQRSQ*KGTPLVKLATLGHI
Trigger: TATATGACCCAAAGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATTTGAACACAGCTTGGGTCCTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 90 bp GAGGAACAGCTGACCCAGGCATCACTCTACTCTCCAGGGAACTCATaGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAAGC +
Preference number: 1 (lower is better)
Translates to: EEQLTQASLYSPGNS*VCDHFTVKLSERRS
Trigger: GCTTCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGGAGAGTAGAGTGATGCCTGGGTCAGCTGTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp CCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATGCATTaGGCATTCTGGTATATTTCCCATCTCAGACTTCAAGGTCTACAC +
Preference number: 1 (lower is better)
Translates to: PACQMEARGASCLMH*AFWYISHLRLQGLH
Trigger: GTGTAGACCTTGAAGTCTGAGATGGGAAATATACCAGAATGCTCAATGCATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CCA 90 bp ATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTaGGGCTTCATGTCTGATGCATTGAGCATTCTGGTATATTTCCCA +
Preference number: 1 (lower is better)
Translates to: MPFVLQIASMSNGSP*GFMSDALSILVYFP
Trigger: TGGGAAATATACCAGAATGCTCAATGCATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR TCA 90 bp TCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTaGTGCATTGAGCATTCTGGTATATTTCCCATCTCAGACTTCAAG +
Preference number: 1 (lower is better)
Translates to: SDCQHVKWKPVGLHV*CIEHSGIFPISDFK
Trigger: CTTGAAGTCTGAGATGGGAAATATACCAGAATGCTCAATGCATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR GCA 90 bp TTTCAGAGAATAACAACATCTCATAAGAGGCCAGAGGATGGCTTGTaGTTAATATCACACCTGTACAGTAGGGCAGTGCTTCCCAGGCTG +
Preference number: 1 (lower is better)
Translates to: FQRITTSHKRPEDGL*LISHLYSRAVLPRL
Trigger: CAGCCTGGGAAGCACTGCCCTACTGTACAGGTGTGATATTAAGCACAAGCCATCCTCTGGCCTCTTATGAGATGTTGTTATTCTCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CCA 90 bp CTACACATCATCCAGATGGTGCAACATCTGGTACTATATGTCCAATaGAATTGCCACAACTCAGCCACTGAGATCCAACATTCCTGCCTC +
Preference number: 1 (lower is better)
Translates to: LHIIQMVQHLVLYVQ*NCHNSATEIQHSCL
Trigger: GAGGCAGGAATGTTGGATCTCAGTGGCTGAGTTGTGGCAATTCCATTGGACATATAGTACCAGATGTTGCACCATCTGGATGATGTGTAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp CTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATaGTCCAGCAGGGAAGCTAGACTGCCTGCCTATGGTTTAGGAAAT +
Preference number: 1 (lower is better)
Translates to: LLLINTNPISAVLVL*SSREARLPAYGLGN
Trigger: ATTTCCTAAACCATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR TCA 90 bp ATTCCAGACCCTGAATTTCTGCTTGCTCACTGTGAGCCATATTGTTaGGATTGTCTGTGCATAGGCAACTTGAGCAGGTTTGGTTTGCCT +
Preference number: 1 (lower is better)
Translates to: IPDPEFLLAHCEPYC*DCLCIGNLSRFGLP
Trigger: AGGCAAACCAAACCTGCTCAAGTTGCCTATGCACAGACAATCTCAACAATATGGCTCACAGTGAGCAAGCAGAAATTCAGGGTCTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 90 bp ATCATCCAGATGGTGCAACATCTGGTACTATATGTCCAATGGAATTaGCACAACTCAGCCACTGAGATCCAACATTCCTGCCTCTCTTCA +
Preference number: 1 (lower is better)
Translates to: IIQMVQHLVLYVQWN*HNSATEIQHSCLSS
Trigger: TGAAGAGAGGCAGGAATGTTGGATCTCAGTGGCTGAGTTGTGGCAATTCCATTGGACATATAGTACCAGATGTTGCACCATCTGGATGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 90 bp CAGCAGCAGTGGTTTTTGCTAGGCCTTTTGAAGACAGCAGGAATCTaGGAGAAGGAACATCATCGTCTTTCACAGCATGGAAACATCAAT +
Preference number: 1 (lower is better)
Translates to: QQQWFLLGLLKTAGI*EKEHHRLSQHGNIN
Trigger: ATTGATGTTTCCATGCTGTGAAAGACGATGATGTTCCTTCTCCCAGATTCCTGCTGTCTTCAAAAGGCCTAGCAAAAACCACTGCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 90 bp CTTTTACAAACTTCCCCATCATGCTTTGGTCTTCGATTTCTGATGTaGATGGTCTGGCTACATATGGTTCATTCCTGGGAGATTGCTGGG +
Preference number: 1 (lower is better)
Translates to: LLQTSPSCFGLRFLM*MVWLHMVHSWEIAG
Trigger: CCCAGCAATCTCCCAGGAATGAACCATATGTAGCCAGACCATCCACATCAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR TCA 90 bp GGATGCCTGGGGTTCAGGAAGCAAAGAAGAATCTTTGGTTATTCATaGAAACCAAATACCAGCTATGTGGCATCTTCTGGGAAAGCACAG +
Preference number: 1 (lower is better)
Translates to: GCLGFRKQRRIFGYS*KPNTSYVASSGKAQ
Trigger: CTGTGCTTTCCCAGAAGATGCCACATAGCTGGTATTTGGTTTTCATGAATAACCAAAGATTCTTCTTTGCTTCCTGAACCCCAGGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp ACATCTGGTACTATATGTCCAATGGAATTGCCACAACTCAGCCACTaGGATCCAACATTCCTGCCTCTCTTCATTCCAAGATTCCTTCTG +
Preference number: 1 (lower is better)
Translates to: TSGTICPMELPQLSH*DPTFLPLFIPRFLL
Trigger: CAGAAGGAATCTTGGAATGAAGAGAGGCAGGAATGTTGGATCTCAGTGGCTGAGTTGTGGCAATTCCATTGGACATATAGTACCAGATGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp AATATGAATCACAATTTTCTTACAGGGTTGCTGAGGTTAAAGCCGTaGAAGCCTGGGAACAAATCTCCCCAGGGAAGGTTTAAGCAAGCA +
Preference number: 1 (lower is better)
Translates to: NMNHNFLTGLLRLKP*KPGNKSPQGRFKQA
Trigger: TGCTTGCTTAAACCTTCCCTGGGGAGATTTGTTCCCAGGCTTTCACGGCTTTAACCTCAGCAACCCTGTAAGAAAATTGTGATTCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp ACTGGGCCAACTATTGTTGTTCTAGAACTTGACCATCCTTCTTTCTaGATATCTCTTAGGAGCTTTCACTTCAGCCTGACTCAGGAGAAC +
Preference number: 1 (lower is better)
Translates to: TGPTIVVLELDHPSF*ISLRSFHFSLTQEN
Trigger: GTTCTCCTGAGTCAGGCTGAAGTGAAAGCTCCTAAGAGATATTCAGAAAGAAGGATGGTCAAGTTCTAGAACAACAATAGTTGGCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 90 bp CCATGTCCTGAACCTGTCTTTCAACTTTTACAAACTTCCCCATCATaGTTTGGTCTTCGATTTCTGATGTGGATGGTCTGGCTACATATG +
Preference number: 1 (lower is better)
Translates to: PCPEPVFQLLQTSPS*FGLRFLMWMVWLHM
Trigger: CATATGTAGCCAGACCATCCACATCAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTGTAAAAGTTGAAAGACAGGTTCAGGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 90 bp CAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTaGTACTATATGTCCAATGGAATTGCCACAACTCAGCCACTGAGA +
Preference number: 1 (lower is better)
Translates to: QFGFISYTSSRWCNI*YYMSNGIATTQPLR
Trigger: TCTCAGTGGCTGAGTTGTGGCAATTCCATTGGACATATAGTACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp TTCAACTTTTACAAACTTCCCCATCATGCTTTGGTCTTCGATTTCTaGTGTGGATGGTCTGGCTACATATGGTTCATTCCTGGGAGATTG +
Preference number: 1 (lower is better)
Translates to: FNFYKLPHHALVFDF*CGWSGYIWFIPGRL
Trigger: CAATCTCCCAGGAATGAACCATATGTAGCCAGACCATCCACATCAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTGTAAAAGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 90 bp TGGGCAAGTTTCAGAACGACTAGTATATCTGTGGTCATGTCATCTTaGGTCATGTTAACCAGTTCCATTGGATTATCATGCTGTTCCCTT +
Preference number: 1 (lower is better)
Translates to: WASFRTTSISVVMSS*VMLTSSIGLSCCSL
Trigger: AAGGGAACAGCATGATAATCCAATGGAACTGGTTAACATGACCCAAGATGACATGACCACAGATATACTAGTCGTTCTGAAACTTGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 90 bp CCTTCAAGGACAAGTGAGGACATGAAGCAAATTCCTAAGGATGCCTaGGGTTCAGGAAGCAAAGAAGAATCTTTGGTTATTCATGAAAAC +
Preference number: 1 (lower is better)
Translates to: PSRTSEDMKQIPKDA*GSGSKEESLVIHEN
Trigger: GTTTTCATGAATAACCAAAGATTCTTCTTTGCTTCCTGAACCCCAGGCATCCTTAGGAATTTGCTTCATGTCCTCACTTGTCCTTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 90 bp ACACAAGAGGGCAGTGATCCTAGAAATAACTTAAACTACTTTCTCTaGTTACCAAACCAAAACCCAAACCAGCCAACCAAACAGACAAAT +
Preference number: 1 (lower is better)
Translates to: TQEGSDPRNNLNYFL*LPNQNPNQPTKQTN
Trigger: ATTTGTCTGTTTGGTTGGCTGGTTTGGGTTTTGGTTTGGTAAGCAGAGAAAGTAGTTTAAGTTATTTCTAGGATCACTGCCCTCTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR GCA 90 bp TGTGTGTGTGTGTTTTCTCCCTGCCAATTCATAACTCATCAGAAATaGTACACTTGGGATTACCACCACTTTTTACAGATAAGGAAACTG +
Preference number: 1 (lower is better)
Translates to: CVCVFSPCQFITHQK*YTWDYHHFLQIRKL
Trigger: CAGTTTCCTTATCTGTAAAAAGTGGTGGTAATCCCAAGTGTAGCATTTCTGATGAGTTATGAATTGGCAGGGAGAAAACACACACACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR GCA 90 bp GATGGCAGAAACTGTGGTTTTCTTATCTCTGAACTTCCAGTGCACTaGAAAGTTCTGGGCATATATTGGTGCTTAATAAACCCTGTTAAA +
Preference number: 1 (lower is better)
Translates to: DGRNCGFLISELPVH*KVLGIYWCLINPVK
Trigger: TTTAACAGGGTTTATTAAGCACCAATATATGCCCAGAACTTTGCAGTGCACTGGAAGTTCAGAGATAAGAAAACCACAGTTTCTGCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 90 bp TCTCTTAGTTACATAACCATAAGATGTCCTAAGTTGAGTCCTGTCTaGTTCTTTGTAGCTTTTGGTGAAGGCCCTAGAGTATCTGCTTAT +
Preference number: 1 (lower is better)
Translates to: SLSYITIRCPKLSPV*FFVAFGEGPRVSAY
Trigger: ATAAGCAGATACTCTAGGGCCTTCACCAAAAGCTACAAAGAAGCAGACAGGACTCAACTTAGGACATCTTATGGTTATGTAACTAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp GAATTTGATCTGCAGGTTCCCATAAGTAGAGTAACATCTTTCTCTTaGAATAGGTGCTGTGTCATAGTCTGTATCATAAGCTTCTCTTGG +
Preference number: 1 (lower is better)
Translates to: EFDLQVPISRVTSFS*NRCCVIVCIISFSW
Trigger: CCAAGAGAAGCTTATGATACAGACTATGACACAGCACCTATTTCAAGAGAAAGATGTTACTCTACTTATGGGAACCTGCAGATCAAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 90 bp TTATTTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTaGAACATCTGGTACTATATGTCCAATGGAATTGCCACAACTCAG +
Preference number: 1 (lower is better)
Translates to: LFLQFGFISYTSSRW*NIWYYMSNGIATTQ
Trigger: CTGAGTTGTGGCAATTCCATTGGACATATAGTACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 90 bp AAAGACAACTTACTAGATGTTAGACAATCAATACTTCCCTACTACTaGTCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCCA +
Preference number: 1 (lower is better)
Translates to: KDNLLDVRQSILPYY*SIQTQSLLSWSYDP
Trigger: TGGATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAAGTATTGATTGTCTAACATCTAGTAAGTTGTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR TCA 90 bp CTAAGAGGAATTACAAATACATTCCTGAGCACTGAGCTGGGCTTTTaGCTACCTCATTGTAAGCCATTCTCAAGTTATTCTTATATACAG +
Preference number: 1 (lower is better)
Translates to: LRGITNTFLSTELGF*LPHCKPFSSYSYIQ
Trigger: CTGTATATAAGAATAACTTGAGAATGGCTTACAATGAGGTAGTCAAAAGCCCAGCTCAGTGCTCAGGAATGTATTTGTAATTCCTCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 90 bp TTTGTCAATATTTCATGGAGTTCTGCTGAAACGATTGCAATTTCTTaGGCAAGTTTCAGAACGACTAGTATATCTGTGGTCATGTCATCT +
Preference number: 1 (lower is better)
Translates to: FVNISWSSAETIAIS*ASFRTTSISVVMSS
Trigger: AGATGACATGACCACAGATATACTAGTCGTTCTGAAACTTGCCCAAGAAATTGCAATCGTTTCAGCAGAACTCCATGAAATATTGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 90 bp GGACCGTGGGCCTCTCCACATACGTTGTTGCTGAGGAAGGAGGAGTaGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGGGCAGGTTCA +
Preference number: 2 (lower is better)
Translates to: GPWASPHTLLLRKEE*PEPFQNWVPLGAGS
Trigger: TGAACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACTCCTCCTTCCTCAGCAACAACGTATGTGGAGAGGCCCACGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR GCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATGCTGTGGGAAGCCCCTaGCTGGGTGGGGCCACCACG +
Preference number: 2 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDAVGSP*LGGATT
Trigger: CGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp GTGTCTGTGTCCGTCTCACCCTCGGCGAGGTACCGCTTCTCCCTCATCCAGCTCTCCGTGACCTGCACCTaGAACCGTTCCATGTGTTGC +
Preference number: 2 (lower is better)
Translates to: VSVSVSPSARYRFSLIQLSVTCT*NRSMCC
Trigger: GCAACACATGGAACGGTTGCAGGTGCAGGTCACGGA...GAGCTGGATGAGGGAGAAGCGGTACCTCGCCGAGGGTGAGACGGACACAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR TCA 90 bp CAGAGGCATGGAGCCGCTGGGCGTGAAGGGGTCCGTGTCTGTGTCCGTCTCACCAAAACCCATAGGGGCTaGCTTTGTCAATGGTCACCT +
Preference number: 2 (lower is better)
Translates to: QRHGAAGREGVRVCVRLTKTHRG*LCQWSP
Trigger: AGGTGACCATTGACAAAGTCAGCCCCTATGGGTTTT...GGTGAGACGGACACAGACACGGACCCCTTCACGCCCAGCGGCTCCATGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAATGGGAAGCCCCTGCCTaGGTGGGGCCACCACGCACA +
Preference number: 2 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKWEAPA*VGPPRT
Trigger: TGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCA...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp ATTAAGGAAAAGGTGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGCAATGGTGGCCAGTGTaGTCAGGCCCCACCACAGGG +
Preference number: 2 (lower is better)
Translates to: IKEKVAAIRRPSHVLGVLQWWPV*SGPTTG
Trigger: CCCTGTGGTGGGGCCTGATCACACTGGCCACCATTG...CAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCACCTTTTCCTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639358.1
3UTR-3UTR TCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATCCAGCTCCTCGTGGTTaGCCGACATCAGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDPAPRG*PTSGTE
Trigger: CTCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGG...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp ACCACAGGGCATCTGCATAGGTCTCAAACTCCTCTTTCATCTCCTCTCCTTGTGGTGGGCACAGATGGCTaGGCCCAGAAGCTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: TTGHLHRSQTPLSSPLLVVGTDG*AQKLPG
Trigger: ACCTGGAAGCTTCTGGGCTCAGCCATCTGTGCCCAC...CACAAGGAGAGGAGATGAAAGAGGAGTTTGAGACCTATGCAGATGCCCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
3UTR-3UTR GCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTGCTGTGGGAAGCCCCTaGCTGGGTGGGGCCACCACG +
Preference number: 2 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVAVGSP*LGGATT
Trigger: CGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGGCTGCTCACAATGTCTaGCCTTGGCCTGGGACTTTG +
Preference number: 2 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMAAHNV*PWPGTL
Trigger: CAAAGTCCCAGGCCAAGGGCAGACATTGTGAGCAGC...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGTCATGCGGAAGGCCGTaGGGAAACGCTCTTTATTGT +
Preference number: 2 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLSCGRP*GNALYC
Trigger: ACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGA...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR GCA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGGAAAGCATGTCGAGATaGCCGGCAGAATACTGCTCA +
Preference number: 2 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLESMSR*PAEYCS
Trigger: TGAGCAGTATTCTGCCGGGCATCTCGACATGCTTTC...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGCCCTGTCTTCCGCCATaGGGTCACCTGTCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: HANHAEKEALCCGDMGRKPCLPP*GHLSRH
Trigger: ATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGG...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATCCCTGCAGGTCAGCCTaGGAGTGGCAGCTCACTCGG +
Preference number: 2 (lower is better)
Translates to: NQMSAIATVALDKTVRENPCRSA*EWQLTR
Trigger: CCGAGTGAGCTGCCACTCCCAGGCTGACCTGCAGGG...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR TCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp CACATAATCATCTCTGTCCTGGGAGATGCTGAAGCCACTTGGAGACCTCTCCAGGCACACGCATGCATTTaGTGCAGCCATTGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: HIIISVLGDAEATWRPLQAHACI*CSHWCP
Trigger: GGGACACCAATGGCTGCATCAAATGCATGCGTGTGC...CTGGAGAGGTCTCCAAGTGGCTTCAGCATCTCCCAGGACAGAGATGATTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR GCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATGCTGCTCACAATGTCTaGCCTTGGCCTGGGACTTTG +
Preference number: 2 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDAAHNV*PWPGTL
Trigger: CAAAGTCCCAGGCCAAGGGCAGACATTGTGAGCAGC...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAAC +
Preference number: 2 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDKRRLS*GRPCGN
Trigger: GTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTT...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTTGGGAAGCCCCTGCCTaGGTGGGGCCACCACGCACA +
Preference number: 2 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVWEAPA*VGPPRT
Trigger: TGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCA...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAATCCTGCTGGATAAACTaGGTGCTTTCCACGCGACAC +
Preference number: 2 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQSCWIN*VLSTRH
Trigger: GTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGA...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATTGTCTGCCCTTGGCCTaGGACTTTGGGCTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDCLPLA*DFGLWF
Trigger: GAACCAAAGCCCAAAGTCCCAGGCCAAGGGCAGACA...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp TGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGTCTCCATAGCCAATTGTGCATCCACCTCTaGGACGTCTTTCTCAACCAG +
Preference number: 2 (lower is better)
Translates to: WRQSDGLPTFWVSCLHSQLCIHL*DVFLNQ
Trigger: CTGGTTGAGAAAGACGTCCCAGAGGTGGATGCACAA...TTGGCTATGGAGACAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
3UTR-3UTR TCA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATGCACACGCATGCATTTaGTGCAGCCATTGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: DNMGILWDKARGPKLCSNAHACI*CSHWCP
Trigger: GGGACACCAATGGCTGCATCAAATGCATGCGTGTGC...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAGGCAGACCTGACTTTTaGGTCCTGGTTCTCTATGGG +
Preference number: 2 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKGRPDF*VLVLYG
Trigger: CCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCC...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAATCCTGCTGGATAAACTaGGTGCTTTCCACGCGACAC +
Preference number: 2 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKSCWIN*VLSTRH
Trigger: GTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGA...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGCTTGGCCTGGGACTTTaGGCTTTGGTTCTAAGTTCC +
Preference number: 2 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMLGLGL*ALVLSS
Trigger: GGAACTTAGAACCAAAGCCCAAAGTCCCAGGCCAAG...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAAGCCCTGCCAAATTCTaGCCGATTTATCCCGAGAAC +
Preference number: 2 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQSPAKF*PIYPEN
Trigger: GTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp ATTAAGGAAAAGGTGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGATGAGTTCTTTGCTGTaGGCACAGATGGCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: IKEKVAAIRRPSHVLGVLMSSLL*AQMAEP
Trigger: GGGCTCAGCCATCTGTGCCCACAGCAAAGAACTCAT...CAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCACCTTTTCCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639358.1
3UTR CAA 90 bp CAGGGCATCTGCATAGGTCTCAAACTCCTCTTTCATCTCCTCTCCTaGTGCATCCACCTCTGGGACGTCTTTCTCAACCAGGTAGACAAG +
Preference number: 2 (lower is better)
Translates to: QGICIGLKLLFHLLS*CIHLWDVFLNQVDK
Trigger: CTTGTCTACCTGGTTGAGAAAGACGTCCCAGAGGTGGATGCACAAGGAGAGGAGATGAAAGAGGAGTTTGAGACCTATGCAGATGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
3UTR-3UTR TCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGGCACACGCATGCATTTaGTGCAGCCATTGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: HANHAEKEALCCGDMGRKAHACI*CSHWCP
Trigger: GGGACACCAATGGCTGCATCAAATGCATGCGTGTGC...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATAGCACTTTGTTGTGGTaGCATGGGGAGGAAGAGGCT +
Preference number: 2 (lower is better)
Translates to: DNMGILWDKARGPKLCSNSTLLW*HGEEEA
Trigger: AGCCTCTTCCTCCCCATGTCACCACAACAAAGTGCT...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAACTCTTGACAAGACTGTaGGGGAGAATAGCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQLLTRL*GRIAVS
Trigger: TGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAG...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAAGCTACTGTGGCTCTTaGCAAGACTGTGAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKSYCGS*QDCEGE
Trigger: TTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCT...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp CTCTCCAGCTCCTCGTGGTTGACCGACATCAGGGACAGAGGTGTGTCACTGTCTTTCTTCCCCATGTCCTaGACCTGTCTTTCAACTTTT +
Preference number: 2 (lower is better)
Translates to: LSSSSWLTDIRDRGVSLSFFPMS*TCLSTF
Trigger: AAAAGTTGAAAGACAGGTTCAGGACATGGGGAAGAA...AGACAGTGACACACCTCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR GCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGTGTACAGTAGGGCAGTaGTTCCCAGGCTGTCTGCTT +
Preference number: 2 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQCTVGQ*FPGCLL
Trigger: AAGCAGACAGCCTGGGAAGCACTGCCCTACTGTACA...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCTGTCTGCCCTTGGCCTaGGACTTTGGGCTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: PNNPCPLSFRLPACQMEACLPLA*DFGLWF
Trigger: GAACCAAAGCCCAAAGTCCCAGGCCAAGGGCAGACA...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTCACAATGTCTGCCCTTaGCCTGGGACTTTGGGCTTT +
Preference number: 2 (lower is better)
Translates to: NETQRSQCKGTPLVKLATHNVCP*PGTLGF
Trigger: AAAGCCCAAAGTCCCAGGCCAAGGGCAGACATTGTG...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp GTGCATCCACCTCTGGGACGTCTTTCTCAACCAGGTAGACAAGAAATGAAGAAAGGCTTCGCAGGGAGGTaGCCAGAACATTGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: VHPPLGRLSQPGRQEMKKGFAGR*PEHCLG
Trigger: ACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCC...TTTCTTCATTTCTTGTCTACCTGGTTGAGAAAGACGTCCCAGAGGTGGATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
3UTR-3UTR TCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGCACTTTCAGCCATATTaGAGGAGTGGGGAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQHFQPY*RSGEKA
Trigger: GGCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTG...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTTGCCCCAGGAGAATTTaGTCTGCAGGTTCCCATAAG +
Preference number: 2 (lower is better)
Translates to: NETQRSQCKGTPLVKLATCPRRI*SAGSHK
Trigger: CTTATGGGAACCTGCAGATCAAATTCTCCTGGGGCA...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR GCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATACTGAACTCAGCTCCTaGCCAGAGGGGCACTTCACT +
Preference number: 2 (lower is better)
Translates to: NQMSAIATVALDKTVRENTELSS*PEGHFT
Trigger: AGTGAAGTGCCCCTCTGGGCAGGAGCTGAGTTCAGT...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGACTGAACTCAGCTCCTaGCCAGAGGGGCACTTCACT +
Preference number: 2 (lower is better)
Translates to: ETINQMSAIATVALDKTVTELSS*PEGHFT
Trigger: AGTGAAGTGCCCCTCTGGGCAGGAGCTGAGTTCAGT...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGCCCGGCAGAATACTaGTCAATCACATCCTTCACA +
Preference number: 2 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPACPAEY*SITSFT
Trigger: TGTGAAGGATGTGATTGAGCAGTATTCTGCCGGGCA...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CCA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATAAATCCCCCTCCTGCTaGATAAACTGGGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: DNMGILWDKARGPKLCSNKSPSC*INWVLS
Trigger: GGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTT...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCTCAAATGGAAGCCCGTaGGGCTTCATGTCTGATGCA +
Preference number: 2 (lower is better)
Translates to: IATVALDKTVRENSSVSCSNGSP*GFMSDA
Trigger: TGCATCAGACATGAAGCCCCACGGGCTTCCATTTGA...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACATCCTGGGGTGTGTTTaGCAGCACTGTCCAAAGTAC +
Preference number: 2 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNILGCV*QHCPKY
Trigger: GTACTTTGGACAGTGCTGCCAAACACACCCCAGGAT...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 90 bp CCCTTTCTCAACTGCACCCAGCAGCAGTGGTTTTTGCTAGGCCTTTaGAAGACAGCAGGAATCTGGGAGAAGGAACATCATCGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: PFLNCTQQQWFLLGL*KTAGIWEKEHHRLS
Trigger: TGAAAGACGATGATGTTCCTTCTCCCAGATTCCTGCTGTCTTCAAAAGGCCTAGCAAAAACCACTGCTGCTGGGTGCAGTTGAGAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGAGCACTTTGTTGTGGTaGCATGGGGAGGAAGAGGCT +
Preference number: 2 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVSTLLW*HGEEEA
Trigger: AGCCTCTTCCTCCCCATGTCACCACAACAAAGTGCT...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCAGTAGGCAGCCCCACTaGTACACAATGTGGTTTTGT +
Preference number: 2 (lower is better)
Translates to: IATVALDKTVRENSSVSCSRQPH*YTMWFC
Trigger: ACAAAACCACATTGTGTATCAGTGGGGCTGCCTACT...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACAGTAGGCAGCCCCACTaGTACACAATGTGGTTTTGT +
Preference number: 2 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNSRQPH*YTMWFC
Trigger: ACAAAACCACATTGTGTATCAGTGGGGCTGCCTACT...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGGGCAGACCTGACTTTTaGGTCCTGGTTCTCTATGGG +
Preference number: 2 (lower is better)
Translates to: ETINQMSAIATVALDKTVGRPDF*VLVLYG
Trigger: CCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCC...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACGCCACCATGCACAGTTaGCTTTCCTTGGGAAATCAT +
Preference number: 2 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNATMHS*LSLGNH
Trigger: ATGATTTCCCAAGGAAAGTCAACTGTGCATGGTGGC...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGATATCTATTCTCGTCTaGAGGTACTTTATCCTGGAA +
Preference number: 2 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLISILV*RYFILE
Trigger: TTCCAGGATAAAGTACCTTCAGACGAGAATAGATAT...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR TCA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCTTGGGTAATACTCCGTaGCCTGCACCTGCAACCGTT +
Preference number: 2 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLLGNTP*PAPATV
Trigger: AACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAA...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR GCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAACCAGAGGATGGCTTGTaGTTAATATCACACCTGTAC +
Preference number: 2 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKPEDGL*LISHLY
Trigger: GTACAGGTGTGATATTAAGCACAAGCCATCCTCTGG...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAGGAGGTGCCCTTGGTTaGGTAATACTCCGTGACCTG +
Preference number: 2 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGGGALG*VILRDL
Trigger: CAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CAA 90 bp GCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATGCATaGAGCATTCTGGTATATTTCCCATCTCAGACTTCAAGGTCTACA +
Preference number: 2 (lower is better)
Translates to: ASMSNGSPWGFMSDA*SILVYFPSQTSRST
Trigger: TGTAGACCTTGAAGTCTGAGATGGGAAATATACCAGAATGCTCAATGCATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCTACTGTGGCTCTTaGCAAGACTGTGAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: NQMSAIATVALDKTVRENSYCGS*QDCEGE
Trigger: TTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCT...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTTCTGCTTGCTCACTGTaGGCCATATTGTTGAGATTG +
Preference number: 2 (lower is better)
Translates to: NETQRSQCKGTPLVKLATSACSL*AILLRL
Trigger: CAATCTCAACAATATGGCTCACAGTGAGCAAGCAGA...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTGCTGGGATGGGAAGGTaGATGCTGACCCTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVAGMGR*MLTLSE
Trigger: CTCAGAAAGGGTCAGCATTCACCTTCCCATCCCAGC...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGACACAATGTCTGCCCTTaGCCTGGGACTTTGGGCTTT +
Preference number: 2 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRHNVCP*PGTLGF
Trigger: AAAGCCCAAAGTCCCAGGCCAAGGGCAGACATTGTG...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTGGGAAAGCACAGGGGTaGGAGAATCCTGGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: FCNLALSPTHHPDGATSGGKAQG*ENPGVC
Trigger: ACACACCCCAGGATTCTCCCACCCCTGTGCTTTCCC...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATTTCCCCATCATGCTTTaGTCTTCGATTTCTGATGTG +
Preference number: 2 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDFPIML*SSISDV
Trigger: CACATCAGAAATCGAAGACCAAAGCATGATGGGGAA...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR TCA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCAGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTAGTAACTCAGCTCCTTaGCTGGTATCAATCTTAGCA +
Preference number: 2 (lower is better)
Translates to: NETQRSQCKGTPLVKLATSNSAP*LVSILA
Trigger: TGCTAAGATTGATACCAGTCAAGGAGCTGAGTTACT...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGGGATCATGTCTTCGATaGGGAAGTCATTCCCATAGC +
Preference number: 2 (lower is better)
Translates to: ETINQMSAIATVALDKTVGSCLR*GSHSHS
Trigger: GCTATGGGAATGACTTCCCCATCGAAGACATGATCC...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGCATATGGTTCATTCCTaGGAGATTGCTGGGATGGGA +
Preference number: 2 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVHMVHS*EIAGMG
Trigger: TCCCATCCCAGCAATCTCCCAGGAATGAACCATATG...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CAA 90 bp GTTTTTCAGAGAATAACAACATCTCATAAGAGGCCAGAGGATGGCTaGTGCTTAATATCACACCTGTACAGTAGGGCAGTGCTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: VFQRITTSHKRPEDG*CLISHLYSRAVLPR
Trigger: CCTGGGAAGCACTGCCCTACTGTACAGGTGTGATATTAAGCACAAGCCATCCTCTGGCCTCTTATGAGATGTTGTTATTCTCTGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCGTACTGGTCCAATCGTaGTTAAAAGTAAGAACAGCA +
Preference number: 2 (lower is better)
Translates to: IATVALDKTVRENSSVSCVLVQS*LKVRTA
Trigger: TGCTGTTCTTACTTTTAATCACGATTGGACCAGTAC...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTCTCTTGACAAGACTGTaGGGGAGAATAGCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: VLPRLSAYILACLTVTYGLLTRL*GRIAVS
Trigger: TGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAG...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACCATATGTGGAGAGTATaGCTCACTCTCCTTTATTGT +
Preference number: 2 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNHMWRV*LTLLYC
Trigger: ACAATAAAGGAGAGTGAGTCATACTCTCCACATATG...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTCCACAACTCAGCCACTaGGATCCAACATTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: FCNLALSPTHHPDGATSGPQLSH*DPTFLP
Trigger: AGGCAGGAATGTTGGATCTCAGTGGCTGAGTTGTGG...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR GCA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCCATCAACCAAATGTCTaGCATAGCTACTGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLHQPNV*HSYCGS
Trigger: AGAGCCACAGTAGCTATGGCAGACATTTGGTTGATG...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGACAGACCCTGAATTTCTaGTTGCTCACTGTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRQTLNF*LLTVSH
Trigger: ATGGCTCACAGTGAGCAAGCAGAAATTCAGGGTCTG...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR GCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGACATCATCCAGATGGTaGAACATCTGGTACTATATG +
Preference number: 2 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQTSSRW*NIWYYM
Trigger: CATATAGTACCAGATGTTGCACCATCTGGATGATGT...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAAAAACAGTTAATTGCTaGAGCGTTTTACACAAGAGG +
Preference number: 2 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKKTVNC*SVLHKR
Trigger: CCTCTTGTGTAAAACGCTCCAGCAATTAACTGTTTT...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CAA 90 bp CTGTGTTCAAATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTaGGTAAAACTGGCCACTTTGGGTCATATAGATCCCAAAAGAAAT +
Preference number: 2 (lower is better)
Translates to: LCSNETQRSQCKGTP*VKLATLGHIDPKRN
Trigger: ATTTCTTTTGGGATCTATATGACCCAAAGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATTTGAACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 90 bp AAGGAAGGACTGACAAATCTGATGAAGTCCACCTATCTTTCTAAGTaGATTTTTCAGGATGGCACAGAGCCGACTTCACCTCTCCAACAG +
Preference number: 2 (lower is better)
Translates to: KEGLTNLMKSTYLSK*IFQDGTEPTSPLQQ
Trigger: CTGTTGGAGAGGTGAAGTCGGCTCTGTGCCATCCTGAAAAATCAACTTAGAAAGATAGGTGGACTTCATCAGATTTGTCAGTCCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: HANHAEKEALCCGDMGRKGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAGTGGGGCTTCATGTCTaGTGCATTGAGCATTCTGGT +
Preference number: 2 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRVGLHV*CIEHSG
Trigger: ACCAGAATGCTCAATGCATCAGACATGAAGCCCCAC...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCCTGAGGTTAAAGCCGTaGAAGCCTGGGAACAAATCT +
Preference number: 2 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSLRLKP*KPGNKS
Trigger: AGATTTGTTCCCAGGCTTTCACGGCTTTAACCTCAG...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGACTGACTCAGGAGAACTaGAACATCCTACCACAGGGA +
Preference number: 2 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRLTQEN*NILPQG
Trigger: TCCCTGTGGTAGGATGTTTCAGTTCTCCTGAGTCAG...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR GCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAATTAAACTACTTTCTCTaGTTACCAAACCAAAACCCA +
Preference number: 2 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKLNYFL*LPNQNP
Trigger: TGGGTTTTGGTTTGGTAAGCAGAGAAAGTAGTTTAA...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCTGTGTGTTTTCTCCCTaGCAATTCATAACTCATCAG +
Preference number: 2 (lower is better)
Translates to: PNNPCPLSFRLPACQMEACVFSP*QFITHQ
Trigger: CTGATGAGTTATGAATTGGCAGGGAGAAAACACACA...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATAGATCTGAAATGCATTaGATCAAGCAAGCATGTTTT +
Preference number: 2 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDRSEMH*IKQACF
Trigger: AAAACATGCTTGCTTGATGCAATGCATTTCAGATCT...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCCAAACTTCCCCATCATaGTTTGGTCTTCGATTTCTG +
Preference number: 2 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLQTSPS*FGLRFL
Trigger: CAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTG...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTGTTCTGGGCATATATTaGTGCTTAATAAACCCTGTT +
Preference number: 2 (lower is better)
Translates to: NETQRSQCKGTPLVKLATVLGIY*CLINPV
Trigger: AACAGGGTTTATTAAGCACCAATATATGCCCAGAAC...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGACAAATACCAGCTATGTaGCATCTTCTGGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRQIPAM*HLLGKH
Trigger: GTGCTTTCCCAGAAGATGCCACATAGCTGGTATTTG...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCGTTGATTTTTCAGGATaGCACAGAGCCGACTTCACC +
Preference number: 2 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSVDFSG*HRADFT
Trigger: GGTGAAGTCGGCTCTGTGCCATCCTGAAAAATCAAC...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp GGGGCCTGTCTCAGAATAGTTGCAGATGATGGTTTTCAAATCGGAATACCTGTTCTGATGTGGATGGTCTaGCTACATATGGTTCATTCC +
Preference number: 2 (lower is better)
Translates to: GACLRIVADDGFQIGIPVLMWMV*LHMVHS
Trigger: GGAATGAACCATATGTAGCCAGACCATCCACATCAG...AACAGGTATTCCGATTTGAAAACCATCATCTGCAACTATTCTGAGACAGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR TCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGGTAACTGTTGACATGTaGGTTGAAAGGAACCTATCT +
Preference number: 2 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVVTVDM*VERNLS
Trigger: AGATAGGTTCCTTTCAACTCACATGTCAACAGTTAC...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCATAACTCATCAGAAATaGTACACTTGGGATTACCAC +
Preference number: 2 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAITHQK*YTWDYH
Trigger: GTGGTAATCCCAAGTGTAGCATTTCTGATGAGTTAT...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAATTCCCTTTCTCAACTaGACCCAGCAGCAGTGGTTT +
Preference number: 2 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRIPFLN*TQQQWF
Trigger: AAACCACTGCTGCTGGGTGCAGTTGAGAAAGGGAAT...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCCTGACTTTTGAGTCCTaGTTCTCTATGGGACAACTG +
Preference number: 2 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMILTFES*FSMGQL
Trigger: CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAG...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACACTCTCCTTTATTGTTaGTTTCCAGTAACTCATGTA +
Preference number: 2 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNTLLYC*FPVTHV
Trigger: TACATGAGTTACTGGAAACCAACAATAAAGGAGAGT...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTGGCAGACCTGACTTTTaGGTCCTGGTTCTCTATGGG +
Preference number: 2 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTGRPDF*VLVLYG
Trigger: CCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCC...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTGAGAGTGGGCAGACCTaGCTTTTGAGTCCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTESGQT*LLSPGS
Trigger: AGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTC...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAGGACAAGTGAGGACATaGAGCAAATTCCTAAGGATG +
Preference number: 2 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRGQVRT*SKFLRM
Trigger: CATCCTTAGGAATTTGCTTCATGTCCTCACTTGTCC...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTGGACAAGTGAGGACATaGAGCAAATTCCTAAGGATG +
Preference number: 2 (lower is better)
Translates to: FCNLALSPTHHPDGATSGGQVRT*SKFLRM
Trigger: CATCCTTAGGAATTTGCTTCATGTCCTCACTTGTCC...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAGTGGTCATGTCATCTTaGGTCATGTTAACCAGTTCC +
Preference number: 2 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRVVMSS*VMLTSS
Trigger: GGAACTGGTTAACATGACCCAAGATGACATGACCAC...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 90 bp CAAATTCCTAAGGATGCCTGGGGTTCAGGAAGCAAAGAAGAATCTTaGGTTATTCATGAAAACCAAATACCAGCTATGTGGCATCTTCTG +
Preference number: 2 (lower is better)
Translates to: QIPKDAWGSGSKEES*VIHENQIPAMWHLL
Trigger: CAGAAGATGCCACATAGCTGGTATTTGGTTTTCATGAATAACCAAAGATTCTTCTTTGCTTCCTGAACCCCAGGCATCCTTAGGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCGTACTGGTCCAATCGTaGTTAAAAGTAAGAACAGCA +
Preference number: 2 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSVLVQS*LKVRTA
Trigger: TGCTGTTCTTACTTTTAATCACGATTGGACCAGTAC...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTACACTTTCAGCCATATTaGAGGAGTGGGGAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: SFSCSGLNRDALISLGILHFQPY*RSGEKA
Trigger: GGCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTG...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTCACTTTCAGCCATATTaGAGGAGTGGGGAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTHFQPY*RSGEKA
Trigger: GGCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTG...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR TCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTGGTGATCATCTCAAGTaGAAGATTCCAGGAAGATCA +
Preference number: 2 (lower is better)
Translates to: FCNLALSPTHHPDGATSGGDHLK*KIPGRS
Trigger: TGATCTTCCTGGAATCTTTCACTTGAGATGATCACC...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAATGAAGATGTTCATTTaGGCCAACAGAGGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRMKMFI*ANRGLF
Trigger: AAACAGGCCTCTGTTGGCTCAAATGAACATCTTCAT...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAAAATTGGACGGTTCTaGAAATTTTGCCTGTTTACA +
Preference number: 2 (lower is better)
Translates to: NQMSAIATVALDKTVRENKIGRF*KFCLFT
Trigger: TGTAAACAGGCAAAATTTCCAGAACCGTCCAATTTT...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAACTCCATTGAGTTGCTaGAAAATGCATCATCTATTG +
Preference number: 2 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRTPLSC*KMHHLL
Trigger: CAATAGATGATGCATTTTCCAGCAACTCAATGGAGT...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTACAATCTCTGCTGTCCTaGTCTTATGATCCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: SFSCSGLNRDALISLGILQSLLS*SYDPAG
Trigger: CCCTGCTGGATCATAAGACCAGGACAGCAGAGATTG...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 90 bp CCATGCACAGTTGACTTTCCTTGGGAAATCATGAGTCTTTTATTTTaGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAAC +
Preference number: 2 (lower is better)
Translates to: PCTVDFPWEIMSLLF*QFGFISYTSSRWCN
Trigger: GTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAAATAAAAGACTCATGATTTCCCAAGGAAAGTCAACTGTGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCTGTTGTTCTAGAACTTaGCCATCCTTCTTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSCCSRT*PSFFLN
Trigger: ATTCAGAAAGAAGGATGGTCAAGTTCTAGAACAACA...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR GCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTTCAAAAACAGTTAATTaGTGGAGCGTTTTACACAAG +
Preference number: 2 (lower is better)
Translates to: VLPRLSAYILACLTVTYGSKTVN*WSVLHK
Trigger: CTTGTGTAAAACGCTCCAGCAATTAACTGTTTTTGA...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTGTTAACCAGTTCCATTaGATTATCATGCTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: FCNLALSPTHHPDGATSGVNQFH*IIMLFP
Trigger: AGGGAACAGCATGATAATCCAATGGAACTGGTTAAC...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCTTACACTGCCATTACTaGCTTCTAAAACCACTAAAG +
Preference number: 2 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSLHCHY*LLKPLK
Trigger: CTTTAGTGGTTTTAGAAGCCAGTAATGGCAGTGTAA...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 90 bp TGGTTTCCAGTAACTCATGTACATAAAGAAGAGCATAGTAACATGTaGGATGTTAGGCAGGTGATCATCTCAAGTGAAAGATTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: WFPVTHVHKEEHSNM*DVRQVIISSERFQE
Trigger: TTCCTGGAATCTTTCACTTGAGATGATCACCTGCCTAACATCCAACATGTTACTATGCTCTTCTTTATGTACATGAGTTACTGGAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CAA 90 bp TCCCTAGTATGCATCAGTCATTGTACTAGAGGCTTTGTGTGTACATaGATTGTCTCACTTGAAAATCAAAACACGGCAGAAGAGTCAAAT +
Preference number: 2 (lower is better)
Translates to: SLVCISHCTRGFVCT*IVSLENQNTAEESN
Trigger: ATTTGACTCTTCTGCCGTGTTTTGATTTTCAAGTGAGACAATCAATGTACACACAAAGCCTCTAGTACAATGACTGATGCATACTAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR GCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTCCAGAGGATGGCTTGTaGTTAATATCACACCTGTAC +
Preference number: 2 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTPEDGL*LISHLY
Trigger: GTACAGGTGTGATATTAAGCACAAGCCATCCTCTGG...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR GCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTACATCAACCAAATGTCTaGCATAGCTACTGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: SFSCSGLNRDALISLGILHQPNV*HSYCGS
Trigger: AGAGCCACAGTAGCTATGGCAGACATTTGGTTGATG...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 90 bp AAATTCCATTGTCCTTGGCTACATAAATTGGAAACTATTTTAACTTaGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: KFHCPWLHKLETILT*CMCVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACACACATACACAAAGTTAAAATAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTACGACTAGTATATCTGTaGTCATGTCATCTTGGGTCA +
Preference number: 2 (lower is better)
Translates to: SFSCSGLNRDALISLGILRLVYL*SCHLGS
Trigger: TGACCCAAGATGACATGACCACAGATATACTAGTCG...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 90 bp GATGGAATTAATTTGTCAATATTTCATGGAGTTCTGCTGAAACGATaGCAATTTCTTGGGCAAGTTTCAGAACGACTAGTATATCTGTGG +
Preference number: 2 (lower is better)
Translates to: DGINLSIFHGVLLKR*QFLGQVSERLVYLW
Trigger: CCACAGATATACTAGTCGTTCTGAAACTTGCCCAAGAAATTGCAATCGTTTCAGCAGAACTCCATGAAATATTGACAAATTAATTCCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR TCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTACATATGTGGAGAGTATaGCTCACTCTCCTTTATTGT +
Preference number: 2 (lower is better)
Translates to: SFSCSGLNRDALISLGILHMWRV*LTLLYC
Trigger: ACAATAAAGGAGAGTGAGTCATACTCTCCACATATG...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTAGATGCATTATATAAATaGAAGAATGGTGTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: SFSCSGLNRDALISLGILDALYK*KNGVVR
Trigger: CCTCACCACACCATTCTTCCATTTATATAATGCATC...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR GCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTATTAAACTACTTTCTCTaGTTACCAAACCAAAACCCA +
Preference number: 2 (lower is better)
Translates to: SFSCSGLNRDALISLGILLNYFL*LPNQNP
Trigger: TGGGTTTTGGTTTGGTAAGCAGAGAAAGTAGTTTAA...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR GCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTAGATCTGAAATGCATTaGATCAAGCAAGCATGTTTT +
Preference number: 2 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTRSEMH*IKQACF
Trigger: AAAACATGCTTGCTTGATGCAATGCATTTCAGATCT...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR TCA 72 bp CCCCTGTGGACGACAGAGGCATGGAGCCGCTGGGCGTaGAGGGGTCCGTGTCTGTGTCCGTCTCACCCTCGG +
Preference number: 3 (lower is better)
Translates to: PLWTTEAWSRWA*RGPCLCPSHPR
Trigger: CCGAGGGTGAGACGGACACAGACACGGACCCCTTCACGCCCAGCGGCTCCATGCCTCTGTCGTCCACAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CAA 90 bp CAGAGGCATGGAGCCGCTGGGCGTGAAGGGGTCCGTGTCTGTGTCCGTCTCACCCATTTGATGCAGCCATaGGTGTCCCCGCTGGTAAGC +
Preference number: 3 (lower is better)
Translates to: QRHGAAGREGVRVCVRLTHLMQP*VSPLVS
Trigger: GCTTACCAGCGGGGACACCAATGGCTGCATCAAATG...GGTGAGACGGACACAGACACGGACCCCTTCACGCCCAGCGGCTCCATGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 72 bp TGGGGAAGTCATTCCCATAGCCCCTGTCTTCCGCCATaGGGTCACCTGTCCCGGCATCTTCAGAACTCTGCC +
Preference number: 3 (lower is better)
Translates to: WGSHSHSPCLPP*GHLSRHLQNSA
Trigger: GGCAGAGTTCTGAAGATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGGGCTATGGGAATGACTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CAA 90 bp GTGTCTGTGTCCGTCTCACCCTCGGCGAGGTACCGCTTCTCCCTCATCCAGCTCCAACCGTTCCATGTGTaGCATGTGCATATCCACGAG +
Preference number: 3 (lower is better)
Translates to: VSVSVSPSARYRFSLIQLQPFHV*HVHIHE
Trigger: CTCGTGGATATGCACATGCAACACATGGAACGGTTG...GAGCTGGATGAGGGAGAAGCGGTACCTCGCCGAGGGTGAGACGGACACAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 72 bp CTTCTCTGCTTCAGCTGGCGAGGAGGTGCCCTTGGTTaGGTAATACTCCGTGACCTGCACCTGCAACCGTTC +
Preference number: 3 (lower is better)
Translates to: LLCFSWRGGALG*VILRDLHLQPF
Trigger: GAACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CAA 90 bp GGAGGTGCCCTTGGTTGGGTAATACTCCGTGACCTGCACCTGCAACCGTTCCATCGCACACGCATGCATTaGATGCAGCCATTGGTGTCC +
Preference number: 3 (lower is better)
Translates to: GGALGWVILRDLHLQPFHRTRMH*MQPLVS
Trigger: GGACACCAATGGCTGCATCAAATGCATGCGTGTGCG...ATGGAACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR TCA 72 bp CTGGCGAGGAGGTGCCCTTGGTTGGGTAATACTCCGTaGCCTGCACCTGCAACCGTTCCATGTGTTGCATGT +
Preference number: 3 (lower is better)
Translates to: LARRCPWLGNTP*PAPATVPCVAC
Trigger: ACATGCAACACATGGAACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCCTCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR GCA 72 bp GGTGGCCAGTGTGATCAGGCCCCACCACAGGGCATCTaGATAGGTCTCAAACTCCTCTTTCATCTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: GGQCDQAPPQGI*IGLKLLFHLLS
Trigger: GGAGAGGAGATGAAAGAGGAGTTTGAGACCTATGCAGATGCCCTGTGGTGGGGCCTGATCACACTGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
3UTR-3UTR CAA 90 bp TGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGTCTCCATAGCCAAGCCGTGATGAGTTCTTaGCTGTGGGCACAGATGGCT +
Preference number: 3 (lower is better)
Translates to: WRQSDGLPTFWVSCLHSQAVMSS*LWAQMA
Trigger: AGCCATCTGTGCCCACAGCAAAGAACTCATCACGGC...TTGGCTATGGAGACAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
3UTR CCA 72 bp CTGAAACATCCTACCACAGGGATTCACAAGGACTGCTaGGGAGCCCTGCCAAATTCTGGCCGATTTATCCCG +
Preference number: 3 (lower is better)
Translates to: LKHPTTGIHKDC*GALPNSGRFIP
Trigger: CGGGATAAATCGGCCAGAATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAATCCCTGTGGTAGGATGTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 72 bp GGAATACCTGTTGTCCTCCTTCTTCTCTGCTTCAGCTaGCGAGGAGGTGCCCTTGGTTGGGTAATACTCCGT +
Preference number: 3 (lower is better)
Translates to: GIPVVLLLLCFS*RGGALGWVILR
Trigger: ACGGAGTATTACCCAACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAGAAGGAGGACAACAGGTATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CAA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAACCTTGGCCTGGGACTTaGGGCTTTGGTTCTAAGTTC +
Preference number: 3 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQPWPGT*GFGSKF
Trigger: GAACTTAGAACCAAAGCCCAAAGTCCCAGGCCAAGG...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCAGCCTCTCCACATACGTaGTTGCTGAGGAAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAASPHT*LLRKEE
Trigger: CTCCTCCTTCCTCAGCAACAACGTATGTGGAGAGGC...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR GCA 72 bp CTACCACAGGGATTCACAAGGACTGCTGGGGAGCCCTaGCAAATTCTGGCCGATTTATCCCGAGAACAATGT +
Preference number: 3 (lower is better)
Translates to: LPQGFTRTAGEP*QILADLSREQC
Trigger: ACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAATCCCTGTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 72 bp GGTCAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTaGTTCTCTATGGGACAACTGAGTGACTCTGGGTAT +
Preference number: 3 (lower is better)
Translates to: GQGEWADLTFES*FSMGQLSDSGY
Trigger: ATACCCAGAGTCACTCAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CCA 72 bp GAATGGTGTGGTGAGGGGAAACAAGGTCAGGGAGAGTaGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATG +
Preference number: 3 (lower is better)
Translates to: EWCGEGKQGQGE*ADLTFESWFSM
Trigger: CATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTGACCTTGTTTCCCCTCACCACACCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CCA 72 bp GAAGGCCCTAGAGTATCTGCTTATGTCCTGACAACATaGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGC +
Preference number: 3 (lower is better)
Translates to: EGPRVSAYVLTT*GFSGTRQEDPS
Trigger: GCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTCAGGACATAAGCAGATACTCTAGGGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGCTGTGCATAGGCAACTaGAGCAGGTTTGGTTTGCCT +
Preference number: 3 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMLCIGN*SRFGLP
Trigger: AGGCAAACCAAACCTGCTCAAGTTGCCTATGCACAG...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAGCACTTTCAGCCATATaGAAGGAGTGGGGAAAAGGC +
Preference number: 3 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKALSAI*KEWGKG
Trigger: GCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTGC...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CAA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATCTCCACATACGTTGTaGCTGAGGAAGGAGGAGTTG +
Preference number: 3 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPASPHTL*LRKEEL
Trigger: CAACTCCTCCTTCCTCAGCAACAACGTATGTGGAGA...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CAA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGTCCAGCTCCTCGTGGTaGACCGACATCAGGGACAGA +
Preference number: 3 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVSSSSW*TDIRDR
Trigger: TCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGGA...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR GCA 72 bp GAACTGAAACATCCTACCACAGGGATTCACAAGGACTaGTGGGGAGCCCTGCCAAATTCTGGCCGATTTATC +
Preference number: 3 (lower is better)
Translates to: ELKHPTTGIHKD*WGALPNSGRFI
Trigger: GATAAATCGGCCAGAATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAATCCCTGTGGTAGGATGTTTCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 72 bp TCTGCCAGAAAGCGTAGGCTTTCATGCGGAAGGCCGTaGGGAAACGCTCTTTATTGTTTAAGCCAACAGGCT +
Preference number: 3 (lower is better)
Translates to: SARKRRLSCGRP*GNALYCLSQQA
Trigger: AGCCTGTTGGCTTAAACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTTTCTGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR TCA 72 bp CTTTTGGTGAAGGCCCTAGAGTATCTGCTTATGTCCTaGCAACATGGGGATTCTCTGGGACAAGGCAAGAGG +
Preference number: 3 (lower is better)
Translates to: LLVKALEYLLMS*QHGDSLGQGKR
Trigger: CCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTCAGGACATAAGCAGATACTCTAGGGCCTTCACCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp ATTCCTGGGAGATTGCTGGGATGGGAAGGTGAATGCTaGCCCTTTCTGAGACTTCTTGTGTTTTGGCGTGGA +
Preference number: 3 (lower is better)
Translates to: IPGRLLGWEGEC*PFLRLLVFWRG
Trigger: TCCACGCCAAAACACAAGAAGTCTCAGAAAGGGTCAGCATTCACCTTCCCATCCCAGCAATCTCCCAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR GCA 72 bp CCCAAGCTGTGTTCAAATGAGACCCAGAGATCCCAGTaGAAAGGGACACCTTTGGTAAAACTGGCCACTTTG +
Preference number: 3 (lower is better)
Translates to: PKLCSNETQRSQ*KGTPLVKLATL
Trigger: CAAAGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATTTGAACACAGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 72 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTaGGGCTTCATGTCTGATGCATTGAGCATTCTGGTA +
Preference number: 3 (lower is better)
Translates to: VLQIASMSNGSP*GFMSDALSILV
Trigger: TACCAGAATGCTCAATGCATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CCA 72 bp GTGAGGGGCTGCCTGCTGGCTTGTTTAGGGGCCAGTTaGCTCAGTTTGGAATGGTTTAATATCAGCAACAAT +
Preference number: 3 (lower is better)
Translates to: VRGCLLACLGAS*LSLEWFNISNN
Trigger: ATTGTTGCTGATATTAAACCATTCCAAACTGAGCCAACTGGCCCCTAAACAAGCCAGCAGGCAGCCCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 72 bp GATTCACAAGGACTGCTGGGGAGCCCTGCCAAATTCTaGCCGATTTATCCCGAGAACAATGTAAGTGGAAAC +
Preference number: 3 (lower is better)
Translates to: DSQGLLGSPAKF*PIYPENNVSGN
Trigger: GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGACATTTGATGCAGCCATaGGTGTCCCCGCTGGTAAGC +
Preference number: 3 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGHLMQP*VSPLVS
Trigger: GCTTACCAGCGGGGACACCAATGGCTGCATCAAATG...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CAA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAACCTTTGTCCTTCAGATaGCCAGCATGTCAAATGGAA +
Preference number: 3 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKPLSFR*PACQME
Trigger: TTCCATTTGACATGCTGGCAATCTGAAGGACAAAGG...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CAA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGAACGATTGCAATTTCTaGGGCAAGTTTCAGAACGAC +
Preference number: 3 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMNDCNF*GKFQND
Trigger: GTCGTTCTGAAACTTGCCCAAGAAATTGCAATCGTT...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGTTGTTTAGGGGCCAGTaGGCTCAGTTTGGAATGGTT +
Preference number: 3 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQLFRGQ*AQFGMV
Trigger: AACCATTCCAAACTGAGCCAACTGGCCCCTAAACAA...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTTGCATGGCCATGGGATaGTTCTTCATTCCCTTTCTC +
Preference number: 3 (lower is better)
Translates to: NETQRSQCKGTPLVKLATCMAMG*FFIPFL
Trigger: GAGAAAGGGAATGAAGAACAATCCCATGGCCATGCA...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp GTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCTACATTACAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: VSPLVSVGCKSK*TIQSLSTLQGG
Trigger: CCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGCTTACCAGCGGGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
3UTR TCA 72 bp ATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATaGTCCAGCAGGGAAGCTAGACTGCCTGCCTATGGT +
Preference number: 3 (lower is better)
Translates to: INTNPISAVLVL*SSREARLPAYG
Trigger: ACCATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR TCA 72 bp CTTAGGAGCTTTCACTTCAGCCTGACTCAGGAGAACTaGAACATCCTACCACAGGGATTCACAAGGACTGCT +
Preference number: 3 (lower is better)
Translates to: LRSFHFSLTQEN*NILPQGFTRTA
Trigger: AGCAGTCCTTGTGAATCCCTGTGGTAGGATGTTTCAGTTCTCCTGAGTCAGGCTGAAGTGAAAGCTCCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 72 bp CATCTTCAGAACTCTGCCAGAAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAACGCTCTTTATTGTTTA +
Preference number: 3 (lower is better)
Translates to: HLQNSARKRRLS*GRPCGNALYCL
Trigger: TAAACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTTTCTGGCAGAGTTCTGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CAA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATCCTTTGTCCTTCAGATaGCCAGCATGTCAAATGGAA +
Preference number: 3 (lower is better)
Translates to: DNMGILWDKARGPKLCSNPLSFR*PACQME
Trigger: TTCCATTTGACATGCTGGCAATCTGAAGGACAAAGG...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAATGAAGTTCAAAGCATaGAATCCAAACTCGAAGTCC +
Preference number: 3 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQMKFKA*NPNSKS
Trigger: GGACTTCGAGTTTGGATTCAATGCTTTGAACTTCAT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATACGGTTCTGGAAATTTaGCCTGTTTACACATCTGTA +
Preference number: 3 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDTVLEI*PVYTSV
Trigger: TACAGATGTGTAAACAGGCAAAATTTCCAGAACCGT...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CAA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAAGGCCAGAGGATGGCTaGTGCTTAATATCACACCTG +
Preference number: 3 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRRPEDG*CLISHL
Trigger: CAGGTGTGATATTAAGCACAAGCCATCCTCTGGCCT...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACGCCATATTGTTGAGATaGTCTGTGCATAGGCAACTT +
Preference number: 3 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNAILLR*SVHRQL
Trigger: AAGTTGCCTATGCACAGACAATCTCAACAATATGGC...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCCGGAAACGCTCTTTATaGTTTAAGCCAACAGGCTTT +
Preference number: 3 (lower is better)
Translates to: IATVALDKTVRENSSVSCRKRSL*FKPTGF
Trigger: AAAGCCTGTTGGCTTAAACAATAAAGAGCGTTTCCG...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR TCA 72 bp CAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTaGTGCATTGAGCATTCTGGTATATTTCCCATCTCA +
Preference number: 3 (lower is better)
Translates to: QHVKWKPVGLHV*CIEHSGIFPIS
Trigger: TGAGATGGGAAATATACCAGAATGCTCAATGCATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR TCA 72 bp CACAATTTTCTTACAGGGTTGCTGAGGTTAAAGCCGTaGAAGCCTGGGAACAAATCTCCCCAGGGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: HNFLTGLLRLKP*KPGNKSPQGRF
Trigger: AAACCTTCCCTGGGGAGATTTGTTCCCAGGCTTTCACGGCTTTAACCTCAGCAACCCTGTAAGAAAATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp ATGGTTCATTCCTGGGAGATTGCTGGGATGGGAAGGTaGATGCTGACCCTTTCTGAGACTTCTTGTGTTTTG +
Preference number: 3 (lower is better)
Translates to: MVHSWEIAGMGR*MLTLSETSCVL
Trigger: CAAAACACAAGAAGTCTCAGAAAGGGTCAGCATTCACCTTCCCATCCCAGCAATCTCCCAGGAATGAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 72 bp TTCTTCATTCCCTTTCTCAACTGCACCCAGCAGCAGTaGTTTTTGCTAGGCCTTTTGAAGACAGCAGGAATC +
Preference number: 3 (lower is better)
Translates to: FFIPFLNCTQQQ*FLLGLLKTAGI
Trigger: GATTCCTGCTGTCTTCAAAAGGCCTAGCAAAAACCACTGCTGCTGGGTGCAGTTGAGAAAGGGAATGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 72 bp AGTATCTGCTTATGTCCTGACAACATGGGGATTCTCTaGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAAT +
Preference number: 3 (lower is better)
Translates to: SICLCPDNMGIL*DKARGPKLCSN
Trigger: ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTCAGGACATAAGCAGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 72 bp TCATGCTTTGGTCTTCGATTTCTGATGTGGATGGTCTaGCTACATATGGTTCATTCCTGGGAGATTGCTGGG +
Preference number: 3 (lower is better)
Translates to: SCFGLRFLMWMV*LHMVHSWEIAG
Trigger: CCCAGCAATCTCCCAGGAATGAACCATATGTAGCCAGACCATCCACATCAGAAATCGAAGACCAAAGCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR-3UTR CAA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAAATAACCCATGCCCTTaGTCCTTCAGATTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRNNPCP*SFRLPA
Trigger: TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATT...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACCACTCTCCTTTATTGTaGGTTTCCAGTAACTCATGT +
Preference number: 3 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNHSPLL*VSSNSC
Trigger: ACATGAGTTACTGGAAACCAACAATAAAGGAGAGTG...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATTCTGTCTGTATAGAGTaGTTTGCAGGGATGAAATCA +
Preference number: 3 (lower is better)
Translates to: DNMGILWDKARGPKLCSNSVCIE*FAGMKS
Trigger: TGATTTCATCCCTGCAAACAACTCTATACAGACAGA...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGATCAACCCACTCAGCCTaGACTGGGCTGATTGGATCA +
Preference number: 3 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRSTHSA*TGLIGS
Trigger: TGATCCAATCAGCCCAGTCAAGGCTGAGTGGGTTGA...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp CAAATGGAAGCCCGTGGGGCTTCATGTCTGATGCATTaGGCATTCTGGTATATTTCCCATCTCAGACTTCAA +
Preference number: 3 (lower is better)
Translates to: QMEARGASCLMH*AFWYISHLRLQ
Trigger: TTGAAGTCTGAGATGGGAAATATACCAGAATGCTCAATGCATCAGACATGAAGCCCCACGGGCTTCCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR GCA 72 bp ATAACAACATCTCATAAGAGGCCAGAGGATGGCTTGTaGTTAATATCACACCTGTACAGTAGGGCAGTGCTT +
Preference number: 3 (lower is better)
Translates to: ITTSHKRPEDGL*LISHLYSRAVL
Trigger: AAGCACTGCCCTACTGTACAGGTGTGATATTAAGCACAAGCCATCCTCTGGCCTCTTATGAGATGTTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CCA 72 bp ATCCAGATGGTGCAACATCTGGTACTATATGTCCAATaGAATTGCCACAACTCAGCCACTGAGATCCAACAT +
Preference number: 3 (lower is better)
Translates to: IQMVQHLVLYVQ*NCHNSATEIQH
Trigger: ATGTTGGATCTCAGTGGCTGAGTTGTGGCAATTCCATTGGACATATAGTACCAGATGTTGCACCATCTGGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCCCTGGTAGACATAGTTaGAAGGGACCTCTGATGTTT +
Preference number: 3 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSPGRHS*KGPLMF
Trigger: AAACATCAGAGGTCCCTTCAAACTATGTCTACCAGG...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGATGCAAAGGGACACCTTaGGTAAAACTGGCCACTTTG +
Preference number: 3 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRCKGTP*VKLATL
Trigger: CAAAGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCA...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp TACAAACTTCCCCATCATGCTTTGGTCTTCGATTTCTaGTGTGGATGGTCTGGCTACATATGGTTCATTCCT +
Preference number: 3 (lower is better)
Translates to: YKLPHHALVFDF*CGWSGYIWFIP
Trigger: AGGAATGAACCATATGTAGCCAGACCATCCACATCAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR GCA 72 bp AATTGCCACAACTCAGCCACTGAGATCCAACATTCCTaGCTCTCTTCATTCCAAGATTCCTTCTGTTCTTTA +
Preference number: 3 (lower is better)
Translates to: NCHNSATEIQHS*LSSFQDSFCSL
Trigger: TAAAGAACAGAAGGAATCTTGGAATGAAGAGAGGCAGGAATGTTGGATCTCAGTGGCTGAGTTGTGGCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 72 bp GAACCTGTCTTTCAACTTTTACAAACTTCCCCATCATaGTTTGGTCTTCGATTTCTGATGTGGATGGTCTGG +
Preference number: 3 (lower is better)
Translates to: EPVFQLLQTSPS*FGLRFLMWMVW
Trigger: CCAGACCATCCACATCAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTGTAAAAGTTGAAAGACAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CCA 72 bp GGTCATGTCATCTTGGGTCATGTTAACCAGTTCCATTaGATTATCATGCTGTTCCCTTGTCTGACAAAAGGA +
Preference number: 3 (lower is better)
Translates to: GHVILGHVNQFH*IIMLFPCLTKG
Trigger: TCCTTTTGTCAGACAAGGGAACAGCATGATAATCCAATGGAACTGGTTAACATGACCCAAGATGACATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp ACAAAAGACCAGAGTCAGCAGAGACGTGGAGATATTTaGACTTGTTTGGTTAAAAACAATGACAGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: TKDQSQQRRGDI*TCLVKNNDRSS
Trigger: GGAGCTCCTGTCATTGTTTTTAACCAAACAAGTTCAAATATCTCCACGTCTCTGCTGACTCTGGTCTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 72 bp TTTATCTCCTACACATCATCCAGATGGTGCAACATCTaGTACTATATGTCCAATGGAATTGCCACAACTCAG +
Preference number: 3 (lower is better)
Translates to: FISYTSSRWCNI*YYMSNGIATTQ
Trigger: CTGAGTTGTGGCAATTCCATTGGACATATAGTACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCCACTCTCCTTTATTGTaGGTTTCCAGTAACTCATGT +
Preference number: 3 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSHSPLL*VSSNSC
Trigger: ACATGAGTTACTGGAAACCAACAATAAAGGAGAGTG...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAAATGAAGATGTTCATTaGAGCCAACAGAGGCCTGTT +
Preference number: 3 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRNEDVH*SQQRPV
Trigger: AACAGGCCTCTGTTGGCTCAAATGAACATCTTCATT...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTAATAACCCATGCCCTTaGTCCTTCAGATTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTNNPCP*SFRLPA
Trigger: TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATT...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CAA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGATCTGTCTGTATAGAGTaGTTTGCAGGGATGAAATCA +
Preference number: 3 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRSVCIE*FAGMKS
Trigger: TGATTTCATCCCTGCAAACAACTCTATACAGACAGA...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp GCATCAGTCATTGTACTAGAGGCTTTGTGTGTACATTaGTTGTCTCACTTGAAAATCAAAACACGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: ASVIVLEALCVH*LSHLKIKTRQK
Trigger: CTTCTGCCGTGTTTTGATTTTCAAGTGAGACAATCAATGTACACACAAAGCCTCTAGTACAATGACTGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp TTGCTAGGGTGTTGTCTGATAGCCACCATGCACAGTTaGCTTTCCTTGGGAAATCATGAGTCTTTTATTTTT +
Preference number: 3 (lower is better)
Translates to: LLGCCLIATMHS*LSLGNHESFIF
Trigger: AAAAATAAAAGACTCATGATTTCCCAAGGAAAGTCAACTGTGCATGGTGGCTATCAGACAACACCCTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 72 bp CCTCCCACAGAATGTTTTTATAGACTCACCTGTTTCTaGAGAATTTCAGAGCTCAGAAATAAAGGTACAGTC +
Preference number: 3 (lower is better)
Translates to: PPTECFYRLTCF*RISELRNKGTV
Trigger: GACTGTACCTTTATTTCTGAGCTCTGAAATTCTGCAGAAACAGGTGAGTCTATAAAAACATTCTGTGGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CCA 72 bp CCCTGCCAATTCATAACTCATCAGAAATGCTACACTTaGGATTACCACCACTTTTTACAGATAAGGAAACTG +
Preference number: 3 (lower is better)
Translates to: PCQFITHQKCYT*DYHHFLQIRKL
Trigger: CAGTTTCCTTATCTGTAAAAAGTGGTGGTAATCCCAAGTGTAGCATTTCTGATGAGTTATGAATTGGCAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CCA 72 bp ATTTCATGGAGTTCTGCTGAAACGATTGCAATTTCTTaGGCAAGTTTCAGAACGACTAGTATATCTGTGGTC +
Preference number: 3 (lower is better)
Translates to: ISWSSAETIAIS*ASFRTTSISVV
Trigger: GACCACAGATATACTAGTCGTTCTGAAACTTGCCCAAGAAATTGCAATCGTTTCAGCAGAACTCCATGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR-3UTR CAA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTAAAGTTCCCCCATTCATaGCTAGGGTGTTGTCTGATA +
Preference number: 3 (lower is better)
Translates to: SFSCSGLNRDALISLGILKFPHS*LGCCLI
Trigger: TATCAGACAACACCCTAGCAATGAATGGGGGAACTT...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp TTACTAGATGTTAGACAATCAATACTTCCCTACTACTaGTCAATACAAACCCAATCTCTGCTGTCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: LLDVRQSILPYY*SIQTQSLLSWS
Trigger: AGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAAGTATTGATTGTCTAACATCTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR TCA 72 bp ACTATTGTTGTTCTAGAACTTGACCATCCTTCTTTCTaGATATCTCTTAGGAGCTTTCACTTCAGCCTGACT +
Preference number: 3 (lower is better)
Translates to: TIVVLELDHPSF*ISLRSFHFSLT
Trigger: AGTCAGGCTGAAGTGAAAGCTCCTAAGAGATATTCAGAAAGAAGGATGGTCAAGTTCTAGAACAACAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp ATTACAAATACATTCCTGAGCACTGAGCTGGGCTTTTaGCTACCTCATTGTAAGCCATTCTCAAGTTATTCT +
Preference number: 3 (lower is better)
Translates to: ITNTFLSTELGF*LPHCKPFSSYS
Trigger: AGAATAACTTGAGAATGGCTTACAATGAGGTAGTCAAAAGCCCAGCTCAGTGCTCAGGAATGTATTTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR GCA 72 bp GTGTTTTCTCCCTGCCAATTCATAACTCATCAGAAATaGTACACTTGGGATTACCACCACTTTTTACAGATA +
Preference number: 3 (lower is better)
Translates to: VFSPCQFITHQK*YTWDYHHFLQI
Trigger: TATCTGTAAAAAGTGGTGGTAATCCCAAGTGTAGCATTTCTGATGAGTTATGAATTGGCAGGGAGAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR-3UTR CAA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTACGGTTCTGGAAATTTaGCCTGTTTACACATCTGTA +
Preference number: 3 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTTVLEI*PVYTSV
Trigger: TACAGATGTGTAAACAGGCAAAATTTCCAGAACCGT...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CCA 72 bp GCCATTCTCAAGTTATTCTTATATACAGCCGATTTTTaGCGGTGTCAAAGAAATTCATTATTTCCCTTGAAG +
Preference number: 3 (lower is better)
Translates to: AILKLFLYTADF*RCQRNSLFPLK
Trigger: CTTCAAGGGAAATAATGAATTTCTTTGACACCGCCAAAAATCGGCTGTATATAAGAATAACTTGAGAATGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp ATGGAATTAATTTGTCAATATTTCATGGAGTTCTGCTaGAACGATTGCAATTTCTTGGGCAAGTTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: MELICQYFMEFC*NDCNFLGKFQN
Trigger: GTTCTGAAACTTGCCCAAGAAATTGCAATCGTTTCAGCAGAACTCCATGAAATATTGACAAATTAATTCCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR TCA 72 bp GTAGCATGGAATTATGAGGATGATTTTGCCAAATTATaGGTAGGTCCTATTAGATTAGGTTTTTCTACAGGA +
Preference number: 3 (lower is better)
Translates to: VAWNYEDDFAKL*VGPIRLGFSTG
Trigger: TCCTGTAGAAAAACCTAATCTAATAGGACCTACTCATAATTTGGCAAAATCATCCTCATAATTCCATGCTAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGCCGCCCTGCGCGCCTTaGGCCCCATCTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLPPCAP*APSASP
Trigger: GGGCGAGGCAGATGGGGCTCAAGGCGCGCAGGGCGG...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCCCCCGAGCGCCAAGGTaGCTTGCTCCACGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAPRAPR*LAPRRR
Trigger: CCGGCGACGTGGAGCAAGTCACCTTGGCGCTCGGGG...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR GCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATAGGAGCCCGATGCCCTaGGGGGTCCTCCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDRSPMP*GVLRCP
Trigger: GGGGCAGCGGAGGACCCCGCAGGGCATCGGGCTCCT...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR TCA 90 bp TTGCTCCTGCACCTTGAGGGCCAGCCCGGACCCCAGGATGCCCGCTGGAAGGGCGTGGGCACAGATGGCTaGGCCCAGAAGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLLHLEGQPGPQDARWKGVGTDG*AQKLPG
Trigger: ACCTGGAAGCTTCTGGGCTCAGCCATCTGTGCCCAC...GCCCTTCCAGCGGGCATCCTGGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTTGGAGCCGCTGGGCGTaGAGGGGTCCGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFWSRWA*RGPCLC
Trigger: ACACAGACACGGACCCCTTCACGCCCAGCGGCTCCA...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTTGGCCAGGAGCCCGATaGCCTGCGGGGTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIWPGAR*PAGSSA
Trigger: AGCGGAGGACCCCGCAGGGCATCGGGCTCCTGGCCA...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTCTCCGCTGCTGCTCTaGGAAGAAGGGGCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAASPLLL*EEGALG
Trigger: CCCGAGCGCCCCTTCTTCCCAGAGCAGCAGCGGAGA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCCAATGGTGGCCAGTGTaGTCAGGCCCCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAQWWPV*SGPTTG
Trigger: CCCTGTGGTGGGGCCTGATCACACTGGCCACCATTG...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGAGCGCCAAGGTGACTTaGTCCACGTCGCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVSAKVT*STSPGA
Trigger: GGCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCT...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR GCA 90 bp GGAAGCGCAGGCTTCGCAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGTGGCCAGGAGCCCGATaGCCTGCGGGGTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: GSAGFAGRWPEHCLGFPQWPGAR*PAGSSA
Trigger: AGCGGAGGACCCCGCAGGGCATCGGGCTCCTGGCCA...CTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCTGCGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAATGGTGGCCAGTGTaGTCAGGCCCCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMQWWPV*SGPTTG
Trigger: CCCTGTGGTGGGGCCTGATCACACTGGCCACCATTG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTACCTCCAGGCAGCCTaGATGAGCTCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAYLQAA*MSSAAG
Trigger: GCCAGCTGCTGAGCTCATTCAGGCTGCCTGGAGGTA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTTGCACAGGGGCTTCCTaGCAAACTTCAGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFCTGAS*QTSVGP
Trigger: GGGGCCGACTGAAGTTTGCCAGGAAGCCCCTGTGCA...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCCCTGTCTTCCGCCATaGGGTCACCTGTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMPCLPP*GHLSRH
Trigger: ATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTCCCTGCAGGTCAGCCTaGGAGTGGCAGCTCACTCGG +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGPCRSA*EWQLTR
Trigger: CCGAGTGAGCTGCCACTCCCAGGCTGACCTGCAGGG...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
3UTR CAA 72 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTaGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTC +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMH*MQPLVSPLVSV
Trigger: GACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGTGGGCACAGATGGCTaGGCCCAGAAGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMVGTDG*AQKLPG
Trigger: ACCTGGAAGCTTCTGGGCTCAGCCATCTGTGCCCAC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGTGGGCACAGATGGCTaGGCCCAGAAGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDVGTDG*AQKLPG
Trigger: ACCTGGAAGCTTCTGGGCTCAGCCATCTGTGCCCAC...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGCAATGGTGGCCAGTGTaGTCAGGCCCCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVQWWPV*SGPTTG
Trigger: CCCTGTGGTGGGGCCTGATCACACTGGCCACCATTG...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGTACCTCCAGGCAGCCTaGATGAGCTCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMYLQAA*MSSAAG
Trigger: GCCAGCTGCTGAGCTCATTCAGGCTGCCTGGAGGTA...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGTGTCACTGTCTCGCGTaGTGCTACGTCTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMCHCLA*CYVSAG
Trigger: CCCGGCAGAGACGTAGCATCACGCGAGACAGTGACA...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGCCCGGACCCCAGGATaGCCGCTGGAAGGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGARTPG*PLEGQK
Trigger: TTTTTGCCCTTCCAGCGGGCATCCTGGGGTCCGGGC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTGCTGTGGGAAGCCCCTaGCTGGGTGGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCAVGSP*LGGATT
Trigger: CGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CGGTGTTGCTCCTGCACCTTGAGGGCCAGCCCGGACCCCAGGATGCCCGCTGGAATGAGTTCTTTGCTGTaGGCACAGATGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RCCSCTLRASPDPRMPAGMSSLL*AQMAEP
Trigger: GGGCTCAGCCATCTGTGCCCACAGCAAAGAACTCAT...TCCAGCGGGCATCCTGGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAACACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGCTTCTCTGCTTCAGCTaGCGAGGAGGTGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLLLCFS*RGGALG
Trigger: ACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAG...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGAACCTTTCCAGAACTaGGTCCCCCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDEPFQN*VPLGAG
Trigger: ACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTC...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGAGGTCAGCCTGGGAGTaGCAGCTCACTCGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVRSAWE*QLTRES
Trigger: CGACTCCCGAGTGAGCTGCCACTCCCAGGCTGACCT...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CAGAGGCATGGAGCCGCTGGGCGTGAAGGGGTCCGTGTCTGTGTCCGTCTCACCCTCTCCAGCTCCTCGTaGTTGACCGACATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QRHGAAGREGVRVCVRLTLSSSS*LTDIRD
Trigger: GTCCCTGATGTCGGTCAACCACGAGGAGCTGGAGAG...GGTGAGACGGACACAGACACGGACCCCTTCACGCCCAGCGGCTCCATGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCTGGGAAGCCCCTGCCTaGGTGGGGCCACCACGCACA +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSWEAPA*VGPPRT
Trigger: TGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCA...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGGGAAAGCACAGGGGTaGGAGAATCCTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFGKAQG*ENPGVC
Trigger: ACACACCCCAGGATTCTCCCACCCCTGTGCTTTCCC...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGCCAGCTCCTCGTGGTTaGCCGACATCAGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVPAPRG*PTSGTE
Trigger: CTCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGG...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCCAGCTCCTCGTGGTTaGCCGACATCAGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPPAPRG*PTSGTE
Trigger: CTCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTTGTCCTGGGAGATGCTaGAGCCACTTGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFCPGRC*SHLETS
Trigger: AGAGGTCTCCAAGTGGCTTCAGCATCTCCCAGGACA...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CAGAGGCATGGAGCCGCTGGGCGTGAAGGGGTCCGTGTCTGTGTCCGTCTCACCTGTCCTGGGAGATGCTaGAGCCACTTGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: QRHGAAGREGVRVCVRLTCPGRC*SHLETS
Trigger: AGAGGTCTCCAAGTGGCTTCAGCATCTCCCAGGACA...GGTGAGACGGACACAGACACGGACCCCTTCACGCCCAGCGGCTCCATGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTGGAGCCGCTGGGCGTaGAGGGGTCCGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVWSRWA*RGPCLC
Trigger: ACACAGACACGGACCCCTTCACGCCCAGCGGCTCCA...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGGAGGAGCTAGGGCCTaGTTTGAGAGGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMGGARA*FERKKG
Trigger: CCCCTTCTTCCTCTCAAATCAGGCCCTAGCTCCTCC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTATTTACAAGCCCGGTaGCAGCCGCCCTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVYLQAR*QPPSRP
Trigger: CGGGCGGGAGGGCGGCTGGCACCGGGCTTGTAAATA...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR GCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGAAGGGGCGCTCGGGGTaGGTGAACGAGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLKGRSG*VNEAAA
Trigger: CGCCGCCGCCTCGTTCACGCACCCCGAGCGCCCCTT...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR GCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCCATCTCCTCTCCTTGTaGATCCACCTCTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAHLLSL*IHLWDV
Trigger: GACGTCCCAGAGGTGGATGCACAAGGAGAGGAGATG...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGCACTTGTGGATGATCTaGAGCCACACCAAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLHLWMI*SHTKPR
Trigger: TCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTG...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGTGCACAGGGGCTTCCTaGCAAACTTCAGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPCTGAS*QTSVGP
Trigger: GGGGCCGACTGAAGTTTGCCAGGAAGCCCCTGTGCA...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCGACCCAGCTTTTGGCTaGATGCTGCCTCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAADPAFG*MLPPAV
Trigger: AACAGCTGGAGGCAGCATCCAGCCAAAAGCTGGGTC...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CCA 90 bp AGTTGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGGGCAGGTTCACAGGGTCCCCTGTCTTCCGCCATaGGGTCACCTGTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SCLNLSRTGSPSGQVHRVPCLPP*GHLSRH
Trigger: ATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGG...GACCCTGTGAACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGAACCTTTCCAGAACTaGGTCCCCCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIEPFQN*VPLGAG
Trigger: ACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTC...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGAGGAGTTGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGGGCAGGTTCACAGGTCAGCCTGGGAGTaGCAGCTCACTCGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: RRSCLNLSRTGSPSGQVHRSAWE*QLTRES
Trigger: CGACTCCCGAGTGAGCTGCCACTCCCAGGCTGACCT...GTGAACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGCCCTGCAGGTCAGCCTaGGAGTGGCAGCTCACTCGG +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVPCRSA*EWQLTR
Trigger: CCGAGTGAGCTGCCACTCCCAGGCTGACCTGCAGGG...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCAAATCCCATCCCCTGTaGACGACAGAGGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAKSHPL*TTEAWS
Trigger: GCTCCATGCCTCTGTCGTCCACAGGGGATGGGATTT...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AGGAGGAGTTGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGGGCAGGTTCACTACCTCCAGGCAGCCTaGATGAGCTCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRSCLNLSRTGSPSGQVHYLQAA*MSSAAG
Trigger: GCCAGCTGCTGAGCTCATTCAGGCTGCCTGGAGGTA...GTGAACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACTCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGCTGGGATGGGAAGGTaGATGCTGACCCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMAGMGR*MLTLSE
Trigger: CTCAGAAAGGGTCAGCATTCACCTTCCCATCCCAGC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTTTGGGTAATACTCCGTaGCCTGCACCTGCAACCGTT +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFLGNTP*PAPATV
Trigger: AACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAA...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATTGTCCTGGGAGATGCTaGAGCCACTTGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDCPGRC*SHLETS
Trigger: AGAGGTCTCCAAGTGGCTTCAGCATCTCCCAGGACA...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGGGAAGGGGTCCATACTaGATCAGAAATCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLGRGPY*IRNPIP
Trigger: GGGGATGGGATTTCTGATTCAGTATGGACCCCTTCC...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCGGAAGGGGTCCATACTaGATCAGAAATCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAGRGPY*IRNPIP
Trigger: GGGGATGGGATTTCTGATTCAGTATGGACCCCTTCC...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCGGAGGGGTCAGCCAGTaGCCTCTTTTAAATGGGCTT +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAGGVSQ*PLLNGL
Trigger: AAGCCCATTTAAAAGAGGTCACTGGCTGACCCCTCC...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTGCCCGGGAACTCCAATaGCATGATCCGCGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRARELQ*HDPRAP
Trigger: AGGGGCGCGCGGATCATGGCATTGGAGTTCCCGGGC...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR GCA 90 bp CGGTGTTGCTCCTGCACCTTGAGGGCCAGCCCGGACCCCAGGATGCCCGCTGGAAGATCAAAGTTTGGATaGGCCGGTACTTGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: RCCSCTLRASPDPRMPAGRSKFG*AGTWRC
Trigger: ACAACGCCAAGTACCGGCGCATCCAAACTTTGATCT...TCCAGCGGGCATCCTGGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAACACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR GCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATTCCGTGACCTGCACCTaGAACCGTTCCATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDSVTCT*NRSMCC
Trigger: GCAACACATGGAACGGTTGCAGGTGCAGGTCACGGA...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAGGGCTGCGGAGAAGCTaGGAGGGCGCGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKGLRRS*EGARGW
Trigger: CCAGCCTCGCGCGCCCTCCCAGCTTCTCCGCAGCCC...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGGCTTCGCAGGGAGGTaGCCAGAACATTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGGFAGR*PEHCLG
Trigger: ACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CGGTGTTGCTCCTGCACCTTGAGGGCCAGCCCGGACCCCAGGATGCCCGCTGGACAATTAAGGAAAAGGTaGCGGCAATCAGACGGCCTT +
Preference number: 4 (lower is better)
Translates to: RCCSCTLRASPDPRMPAGQLRKR*RQSDGL
Trigger: AAGGCCGTCTGATTGCCGCCACCTTTTCCTTAATTG...TCCAGCGGGCATCCTGGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAACACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATAAGAGACCCAGCTTTTaGCTGGATGCTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDKRPSF*LDAASS
Trigger: GCTGGAGGCAGCATCCAGCCAAAAGCTGGGTCTCTT...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTGGCGGCCTTCAGGGTaGGGATCATGTCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVWRPSG*GSCLRW
Trigger: CCATCGAAGACATGATCCCCACCCTGAAGGCCGCCA...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGGAGGTGCCCTTGGTTaGGTAATACTCCGTGACCTG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMGGALG*VILRDL
Trigger: CAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTTCTCTGCTTCAGCTaGCGAGGAGGTGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPLLCFS*RGGALG
Trigger: ACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTCTCCAGCTCCTCGTaGTTGACCGACATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPLSSSS*LTDIRD
Trigger: GTCCCTGATGTCGGTCAACCACGAGGAGCTGGAGAG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGTCCTGCTGGATAAACTaGGTGCTTTCCACGCGACAC +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLSCWIN*VLSTRH
Trigger: GTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGA...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCACCCCGAGCGCCAAGGTaGCTTGCTCCACGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAPRAPR*LAPRRR
Trigger: CCGGCGACGTGGAGCAAGTCACCTTGGCGCTCGGGG...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR TCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCTCCAGGCAGCCTGAATaGGCTCAGCAGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSSRQPE*AQQLAS
Trigger: GGAAGCCAGCTGCTGAGCTCATTCAGGCTGCCTGGA...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGCACACGCATGCATTTaGTGCAGCCATTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGAHACI*CSHWCP
Trigger: GGGACACCAATGGCTGCATCAAATGCATGCGTGTGC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGGCACACGCATGCATTTaGTGCAGCCATTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVAHACI*CSHWCP
Trigger: GGGACACCAATGGCTGCATCAAATGCATGCGTGTGC...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGAGCACTTTGTTGTGGTaGCATGGGGAGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMSTLLW*HGEEEA
Trigger: AGCCTCTTCCTCCCCATGTCACCACAACAAAGTGCT...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTAGCTACTGTGGCTCTTaGCAAGACTGTGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFSYCGS*QDCEGE
Trigger: TTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCT...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGTGCCCCAGGAGAATTTaGTCTGCAGGTTCCCATAAG +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLCPRRI*SAGSHK
Trigger: CTTATGGGAACCTGCAGATCAAATTCTCCTGGGGCA...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTCATCTCCTCTCCTTGTaGATCCACCTCTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGHLLSL*IHLWDV
Trigger: GACGTCCCAGAGGTGGATGCACAAGGAGAGGAGATG...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGCATCTCCTCTCCTTGTaGATCCACCTCTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVHLLSL*IHLWDV
Trigger: GACGTCCCAGAGGTGGATGCACAAGGAGAGGAGATG...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCCACCACAGGGCATCTaGATAGGTCTCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMPPQGI*IGLKLL
Trigger: GAGGAGTTTGAGACCTATGCAGATGCCCTGTGGTGG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGTCATGCGGAAGGCCGTaGGGAAACGCTCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLSCGRP*GNALYC
Trigger: ACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGA...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPKRRLS*GRPCGN
Trigger: GTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTT...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCGTGACCTGCACCTaGAACCGTTCCATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVSVTCT*NRSMCC
Trigger: GCAACACATGGAACGGTTGCAGGTGCAGGTCACGGA...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGGTCCTCCTTCTTCTCTaGTTCAGCTGGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPVLLLL*FSWRGG
Trigger: ACCTCCTCGCCAGCTGAAGCAGAGAAGAAGGAGGAC...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGGTCCTCCTTCTTCTCTaGTTCAGCTGGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVVLLLL*FSWRGG
Trigger: ACCTCCTCGCCAGCTGAAGCAGAGAAGAAGGAGGAC...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GTGTCTGTGTCCGTCTCACCCTCGGCGAGGTACCGCTTCTCCCTCATCCAGCTCGTCCTCCTTCTTCTCTaGTTCAGCTGGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: VSVSVSPSARYRFSLIQLVLLLL*FSWRGG
Trigger: ACCTCCTCGCCAGCTGAAGCAGAGAAGAAGGAGGAC...GAGCTGGATGAGGGAGAAGCGGTACCTCGCCGAGGGTGAGACGGACACAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR GCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGGTGGAGGGGAGGAGTaGCTGCATGGCCATGGGATT +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSGGGEE*LHGHGI
Trigger: AATCCCATGGCCATGCAGGCACTCCTCCCCTCCACC...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTTGTTTCTCTTGACTaGGCGGCTCAGCGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGVVSLD*AAQRGL
Trigger: AAGACCCCGCTGAGCCGCCCAGTCAAGAGAAACAAC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTTGTGCATCCACCTCTaGGACGTCTTTCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAALCIHL*DVFLNQ
Trigger: CTGGTTGAGAAAGACGTCCCAGAGGTGGATGCACAA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGGCCTTCCCACGTTTTaGGTGTCTTGTCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMGLPTF*VSCLHS
Trigger: GCTATGGAGACAAGACACCCAAAACGTGGGAAGGCC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATAGACTTCTTGTGTTTTaGCGTGGAGGGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDRLLVF*RGGRSR
Trigger: CCTGGACCTCCCTCCACGCCAAAACACAAGAAGTCT...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGGGAGGTGCCCTTGGTTaGGTAATACTCCGTGACCTG +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVGGALG*VILRDL
Trigger: CAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGAAATCCCATCCCCTGTaGACGACAGAGGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVKSHPL*TTEAWS
Trigger: GCTCCATGCCTCTGTCGTCCACAGGGGATGGGATTT...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTTGGGAAGCCCCTGCCTaGGTGGGGCCACCACGCACA +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSWEAPA*VGPPRT
Trigger: TGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCA...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGCTTGGCCTGGGACTTTaGGCTTTGGTTCTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLLGLGL*ALVLSS
Trigger: GGAACTTAGAACCAAAGCCCAAAGTCCCAGGCCAAG...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTCAAATGGAAGCCCGTaGGGCTTCATGTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAASNGSP*GFMSDA
Trigger: TGCATCAGACATGAAGCCCCACGGGCTTCCATTTGA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATCCTGGGGTGTGTTTaGCAGCACTGTCCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAILGCV*QHCPKY
Trigger: GTACTTTGGACAGTGCTGCCAAACACACCCCAGGAT...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCAGCCCTGCCAAATTCTaGCCGATTTATCCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAASPAKF*PIYPEN
Trigger: GTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCT...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp GGGCCACCACGCACACGCATGCATTTGATGCAGCCATaGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: GPPRTRMHLMQP*VSPLVSVGCKS
Trigger: ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
3UTR CAA 72 bp AGGAAGCGCAGGCTTCGCAGGGAGGTGGCCAGAACATaGCCTTGGTTTCCCACAGCAACCACTGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: RKRRLRREVART*PWFPTATTGTE
Trigger: CTCTGTGCCAGTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCTGCGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp GAAAAGGTGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGTCTCCATGGCGTTGTTTCTCTTaGCTGGGCGGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: EKVAAIRRPSHVLGVLSPWRCFS*LGGSAG
Trigger: CCCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCA...TGGAGACAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCACCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGTCTCATACTCCTTaGATGTGGTCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMQSHTP*MWSGQP
Trigger: TGGCTGTCCTGACCACATTCAAGGAGTATGAGACTG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTGTGGGCACAGATGGCTaGGCCCAGAAGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRVGTDG*AQKLPG
Trigger: ACCTGGAAGCTTCTGGGCTCAGCCATCTGTGCCCAC...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTTCCAGGCAGCCTGAATaGGCTCAGCAGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCSRQPE*AQQLAS
Trigger: GGAAGCCAGCTGCTGAGCTCATTCAGGCTGCCTGGA...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCAAAACCCATAGGGGCTaGCTTTGTCAATGGTCACCT +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAKTHRG*LCQWSP
Trigger: AGGTGACCATTGACAAAGTCAGCCCCTATGGGTTTT...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTTGTCACTGTCTCGCGTaGTGCTACGTCTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRCHCLA*CYVSAG
Trigger: CCCGGCAGAGACGTAGCATCACGCGAGACAGTGACA...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTCCAGCTCCTCGTGGTTaGCCGACATCAGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCPAPRG*PTSGTE
Trigger: CTCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGG...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGTGGAGCCGCTGGGCGTaGAGGGGTCCGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKWSRWA*RGPCLC
Trigger: ACACAGACACGGACCCCTTCACGCCCAGCGGCTCCA...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGAGGGGTCAGCCAGTaGCCTCTTTTAAATGGGCTT +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIGGVSQ*PLLNGL
Trigger: AAGCCCATTTAAAAGAGGTCACTGGCTGACCCCTCC...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCAGGGGCACTTGTGGATaGTCTGCAGCCACACCAAGC +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSRGTCG*SAATPS
Trigger: GCTTGGTGTGGCTGCAGATCATCCACAAGTGCCCCT...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTAGATCAAAGTTTGGATaGGCCGGTACTTGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFRSKFG*AGTWRC
Trigger: ACAACGCCAAGTACCGGCGCATCCAAACTTTGATCT...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR GCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTCCACCACAGGGCATCTaGATAGGTCTCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIPPQGI*IGLKLL
Trigger: GAGGAGTTTGAGACCTATGCAGATGCCCTGTGGTGG...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGAACCGTTCCATGTGTTaGATGTGCATATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLNRSMC*MCISTR
Trigger: CCTCGTGGATATGCACATGCAACACATGGAACGGTT...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGGCTTCGCAGGGAGGTaGCCAGAACATTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSGFAGR*PEHCLG
Trigger: ACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCC...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGCAATTAAGGAAAAGGTaGCGGCAATCAGACGGCCTT +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLQLRKR*RQSDGL
Trigger: AAGGCCGTCTGATTGCCGCCACCTTTTCCTTAATTG...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTCATATGGTTCATTCCTaGGAGATTGCTGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFHMVHS*EIAGMG
Trigger: TCCCATCCCAGCAATCTCCCAGGAATGAACCATATG...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGCCCTGCAGGTCAGCCTaGGAGTGGCAGCTCACTCGG +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLPCRSA*EWQLTR
Trigger: CCGAGTGAGCTGCCACTCCCAGGCTGACCTGCAGGG...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCCACTCAGCCTTGACTaGGCTGATTGGATCATTGCC +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPPLSLD*ADWIIA
Trigger: GGCAATGATCCAATCAGCCCAGTCAAGGCTGAGTGG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAGGAACTCCAATGCCATaGTCCGCGCGCCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKGTPMP*SARPSP
Trigger: TGGGGAGGGGCGCGCGGATCATGGCATTGGAGTTCC...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR TCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTCAGTCTCATACTCCTTaGATGTGGTCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGQSHTP*MWSGQP
Trigger: TGGCTGTCCTGACCACATTCAAGGAGTATGAGACTG...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGAAAACCCATAGGGGCTaGCTTTGTCAATGGTCACCT +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMKTHRG*LCQWSP
Trigger: AGGTGACCATTGACAAAGTCAGCCCCTATGGGTTTT...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATTGGAGCCGCTGGGCGTaGAGGGGTCCGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDWSRWA*RGPCLC
Trigger: ACACAGACACGGACCCCTTCACGCCCAGCGGCTCCA...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATCTCTTGACAAGACTGTaGGGGAGAATAGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDLLTRL*GRIAVS
Trigger: TGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAG...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTGGGGCTTCATGTCTaGTGCATTGAGCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGVGLHV*CIEHSG
Trigger: ACCAGAATGCTCAATGCATCAGACATGAAGCCCCAC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTTTCAATTCCAGACCCTaGATTTCTGCTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFFNSRP*ISACSL
Trigger: CAGTGAGCAAGCAGAAATTCAGGGTCTGGAATTGAA...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTTCAATTCCAGACCCTaGATTTCTGCTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAFNSRP*ISACSL
Trigger: CAGTGAGCAAGCAGAAATTCAGGGTCTGGAATTGAA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTATCTGCTTATGTCCTaGCAACATGGGGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAYLLMS*QHGDSL
Trigger: CAGAGAATCCCCATGTTGTCAGGACATAAGCAGATA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATTATTTTCTGCCACTaGCAGCTGGATTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLIIFCH*QLDCEA
Trigger: GGCTTCACAATCCAGCTGTCAGTGGCAGAAAATAAT...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAACGCCTTCTCCGCTGCTaGTCTGGGAAGAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKRLLRC*SGKKGR
Trigger: GCGCCCCTTCTTCCCAGAGCAGCAGCGGAGAAGGCG...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR GCA 90 bp GTGCATCCACCTCTGGGACGTCTTTCTCAACCAGGTAGACAAGAAATGAAGAAAAGGAGCCCGATGCCCTaGGGGGTCCTCCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VHPPLGRLSQPGRQEMKKRSPMP*GVLRCP
Trigger: GGGGCAGCGGAGGACCCCGCAGGGCATCGGGCTCCT...TTTCTTCATTTCTTGTCTACCTGGTTGAGAAAGACGTCCCAGAGGTGGATGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR GCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCAGCTTTTGGCTGGATaGTGCCTCCAGCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPQLLAG*CLQLFF
Trigger: AAAGAACAGCTGGAGGCAGCATCCAGCCAAAAGCTG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR GCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTTCATGCGGAAGGCCGTaGGGAAACGCTCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGSCGRP*GNALYC
Trigger: ACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGA...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATTGCCCGGCAGAATACTaGTCAATCACATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDCPAEY*SITSFT
Trigger: TGTGAAGGATGTGATTGAGCAGTATTCTGCCGGGCA...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGAAAGCATGTCGAGATaGCCGGCAGAATACTGCTCA +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIESMSR*PAEYCS
Trigger: TGAGCAGTATTCTGCCGGGCATCTCGACATGCTTTC...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGAAAGCATGTCGAGATaGCCGGCAGAATACTGCTCA +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGESMSR*PAEYCS
Trigger: TGAGCAGTATTCTGCCGGGCATCTCGACATGCTTTC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGAACCGTTCCATGTGTTaGATGTGCATATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMNRSMC*MCISTR
Trigger: CCTCGTGGATATGCACATGCAACACATGGAACGGTT...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTCCAGAGGATGGCTTGTaGTTAATATCACACCTGTAC +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFPEDGL*LISHLY
Trigger: GTACAGGTGTGATATTAAGCACAAGCCATCCTCTGG...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGCTTCGCAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGCAACCACTGGCTTCGCAGGGAGGTaGCCAGAACATTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RLRREVARTLPWFPTATTGFAGR*PEHCLG
Trigger: ACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCC...AGTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CCA 90 bp GGAGGTGCCCTTGGTTGGGTAATACTCCGTGACCTGCACCTGCAACCGTTCCATGGCTTCGCAGGGAGGTaGCCAGAACATTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GGALGWVILRDLHLQPFHGFAGR*PEHCLG
Trigger: ACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCC...ATGGAACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGAAGAGACCCAGCTTTTaGCTGGATGCTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVKRPSF*LDAASS
Trigger: GCTGGAGGCAGCATCCAGCCAAAAGCTGGGTCTCTT...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGGGAGGTGCCCTTGGTTaGGTAATACTCCGTGACCTG +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVGGALG*VILRDL
Trigger: CAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCTTCTCTGCTTCAGCTaGCGAGGAGGTGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRLLCFS*RGGALG
Trigger: ACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAG...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGCTTCTCTGCTTCAGCTaGCGAGGAGGTGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLLLCFS*RGGALG
Trigger: ACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAG...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAGGTCAGCCTGGGAGTaGCAGCTCACTCGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSRSAWE*QLTRES
Trigger: CGACTCCCGAGTGAGCTGCCACTCCCAGGCTGACCT...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTTGGGAAGCCCCTGCCTaGGTGGGGCCACCACGCACA +
Preference number: 4 (lower is better)
Translates to: NETQRSQCKGTPLVKLATWEAPA*VGPPRT
Trigger: TGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCA...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCGTGGTCATGTCATCTTaGGTCATGTTAACCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAVVMSS*VMLTSS
Trigger: GGAACTGGTTAACATGACCCAAGATGACATGACCAC...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGATCCTGGGGTGTGTTTaGCAGCACTGTCCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPILGCV*QHCPKY
Trigger: GTACTTTGGACAGTGCTGCCAAACACACCCCAGGAT...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTGCACCCAGCAGCAGTaGTTTTTGCTAGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVCTQQQ*FLLGLL
Trigger: CAAAAGGCCTAGCAAAAACCACTGCTGCTGGGTGCA...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTCTGACCTCACTTTTGTaGGCAGAGGAAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGLTSLL*AEEEKG
Trigger: TCCCTTCTCTTCCTCTGCCCACAAAAGTGAGGTCAG...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp GCCTCTCCACATACGTTGTTGCTGAGGAAGGAGGAGTaGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: ASPHTLLLRKEE*PEPFQNWVPLG
Trigger: CCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACTCCTCCTTCCTCAGCAACAACGTATGTGGAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCCGCCCTGCGCGCCTTaGGCCCCATCTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGPPCAP*APSASP
Trigger: GGGCGAGGCAGATGGGGCTCAAGGCGCGCAGGGCGG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR TCA 90 bp GAAGCGCAGGCTTCGCAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGCCAGTCTCATACTCCTTaGATGTGGTCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: EAQASQGGGQNIALVSHSQSHTP*MWSGQP
Trigger: TGGCTGTCCTGACCACATTCAAGGAGTATGAGACTG...GCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCTGCGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGGTGGGCACAGATGGCTaGGCCCAGAAGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLVGTDG*AQKLPG
Trigger: ACCTGGAAGCTTCTGGGCTCAGCCATCTGTGCCCAC...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGTACCTCCAGGCAGCCTaGATGAGCTCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKYLQAA*MSSAAG
Trigger: GCCAGCTGCTGAGCTCATTCAGGCTGCCTGGAGGTA...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTTGGTCTTCGATTTCTaGTGTGGATGGTCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVLVFDF*CGWSGY
Trigger: GTAGCCAGACCATCCACATCAGAAATCGAAGACCAA...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTAAAACCCATAGGGGCTaGCTTTGTCAATGGTCACCT +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGKTHRG*LCQWSP
Trigger: AGGTGACCATTGACAAAGTCAGCCCCTATGGGTTTT...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTTGTCACTGTCTCGCGTaGTGCTACGTCTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSCHCLA*CYVSAG
Trigger: CCCGGCAGAGACGTAGCATCACGCGAGACAGTGACA...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGGAGGGGTCAGCCAGTaGCCTCTTTTAAATGGGCTT +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSGGVSQ*PLLNGL
Trigger: AAGCCCATTTAAAAGAGGTCACTGGCTGACCCCTCC...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCAGCACTTTGTTGTGGTaGCATGGGGAGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSSTLLW*HGEEEA
Trigger: AGCCTCTTCCTCCCCATGTCACCACAACAAAGTGCT...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGAGTAGGCAGCCCCACTaGTACACAATGTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPSRQPH*YTMWFC
Trigger: ACAAAACCACATTGTGTATCAGTGGGGCTGCCTACT...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTAGTAGGCAGCCCCACTaGTACACAATGTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAISRQPH*YTMWFC
Trigger: ACAAAACCACATTGTGTATCAGTGGGGCTGCCTACT...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATTCTGCTTGCTCACTGTaGGCCATATTGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDSACSL*AILLRL
Trigger: CAATCTCAACAATATGGCTCACAGTGAGCAAGCAGA...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCAGTAACTCAGCTCCTTaGCTGGTATCAATCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAASNSAP*LVSILA
Trigger: TGCTAAGATTGATACCAGTCAAGGAGCTGAGTTACT...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGGACAAGTGAGGACATaGAGCAAATTCCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMGQVRT*SKFLRM
Trigger: CATCCTTAGGAATTTGCTTCATGTCCTCACTTGTCC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGAAGATGTTCATTTaGGCCAACAGAGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLMKMFI*ANRGLF
Trigger: AAACAGGCCTCTGTTGGCTCAAATGAACATCTTCAT...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGCTTCGCCTTCTCCGCTaGTGCTCTGGGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLLRLLR*CSGKKG
Trigger: CCCCTTCTTCCCAGAGCAGCAGCGGAGAAGGCGAAG...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR GCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTCATCTCCTCTCCTTGTaGATCCACCTCTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCHLLSL*IHLWDV
Trigger: GACGTCCCAGAGGTGGATGCACAAGGAGAGGAGATG...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTTGCCCGGCAGAATACTaGTCAATCACATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAICPAEY*SITSFT
Trigger: TGTGAAGGATGTGATTGAGCAGTATTCTGCCGGGCA...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTTCATTCCTGGGAGATTaGTGGGATGGGAAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGSFLGD*WDGKVN
Trigger: ATTCACCTTCCCATCCCAGCAATCTCCCAGGAATGA...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTAACCGTTCCATGTGTTaGATGTGCATATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGNRSMC*MCISTR
Trigger: CCTCGTGGATATGCACATGCAACACATGGAACGGTT...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCTGTACAGTAGGGCAGTaGTTCCCAGGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSCTVGQ*FPGCLL
Trigger: AAGCAGACAGCCTGGGAAGCACTGCCCTACTGTACA...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTGCTGCTCACAATGTCTaGCCTTGGCCTGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRAAHNV*PWPGTL
Trigger: CAAAGTCCCAGGCCAAGGGCAGACATTGTGAGCAGC...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGGCTGCTCACAATGTCTaGCCTTGGCCTGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLAAHNV*PWPGTL
Trigger: CAAAGTCCCAGGCCAAGGGCAGACATTGTGAGCAGC...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR GCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGGAACTTCCAGTGCACTaGAAAGTTCTGGGCATATAT +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLELPVH*KVLGIY
Trigger: ATATATGCCCAGAACTTTGCAGTGCACTGGAAGTTC...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTGGTGTGATGTTCTTTaGTCTGAGCTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAWCDVL*SELLLL
Trigger: AAGAAGCAGAAGCTCAGAGCAAAGAACATCACACCA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGATTCCCTTTCTCAACTaGACCCAGCAGCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPIPFLN*TQQQWF
Trigger: AAACCACTGCTGCTGGGTGCAGTTGAGAAAGGGAAT...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGATGAGTTCTTTGCTGTaGGCACAGATGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVMSSLL*AQMAEP
Trigger: GGGCTCAGCCATCTGTGCCCACAGCAAAGAACTCAT...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAAGCGCAGGCTTCGCAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGTTGTGCATCCACCTCTaGGACGTCTTTCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: GSAGFAGRWPEHCLGFPQLCIHL*DVFLNQ
Trigger: CTGGTTGAGAAAGACGTCCCAGAGGTGGATGCACAA...CTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCTGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTAAGGACTTTCTTCTATaGCATCTACATTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFKDFLL*HLHSEG
Trigger: CCCCTCTGAATGTAGATGCCATAGAAGAAAGTCCTT...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCAGACTTCTTGTGTTTTaGCGTGGAGGGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSRLLVF*RGGRSR
Trigger: CCTGGACCTCCCTCCACGCCAAAACACAAGAAGTCT...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCATATGGTTCATTCCTaGGAGATTGCTGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPHMVHS*EIAGMG
Trigger: TCCCATCCCAGCAATCTCCCAGGAATGAACCATATG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTTCCCCATCATGCTTTaGTCTTCGATTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAFPIML*SSISDV
Trigger: CACATCAGAAATCGAAGACCAAAGCATGATGGGGAA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGTGACCTCTTTTAAATaGGCTTATTGGAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMVTSFK*AYWKGS
Trigger: GGACCCCTTCCAATAAGCCCATTTAAAAGAGGTCAC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCTGACTTTTGAGTCCTaGTTCTCTATGGGACAACTG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMLTFES*FSMGQL
Trigger: CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGTCTCCAGGGAACTCATaGGTCTGTGATCATTTTACT +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLSPGNS*VCDHFT
Trigger: AGTAAAATGATCACAGACCCATGAGTTCCCTGGAGA...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTACTGTTCTGAGCTTTTaGCCTCCCACAGAATGTTTT +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFTVLSF*PPTECF
Trigger: AAAACATTCTGTGGGAGGCCAAAAGCTCAGAACAGT...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGTGGCGTTGTTTCTCTTaGCTGGGCGGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQWRCFS*LGGSAG
Trigger: CCCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCA...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR TCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCCAATGGTGGCCAGTGTaGTCAGGCCCCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCQWWPV*SGPTTG
Trigger: CCCTGTGGTGGGGCCTGATCACACTGGCCACCATTG...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTGGAAGGGGTCCATACTaGATCAGAAATCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCGRGPY*IRNPIP
Trigger: GGGGATGGGATTTCTGATTCAGTATGGACCCCTTCC...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTGGCAGACCTGACTTTTaGGTCCTGGTTCTCTATGGG +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRGRPDF*VLVLYG
Trigger: CCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCC...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGAGGTGCCCTTGGTTGGGTAATACTCCGTGACCTGCACCTGCAACCGTTCCATGAGAGTGGGCAGACCTaGCTTTTGAGTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GGALGWVILRDLHLQPFHESGQT*LLSPGS
Trigger: AGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTC...ATGGAACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTCATCTGGATTATCTTaGTTGTCACCATGGCAACTA +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAASSGLS*LSPWQL
Trigger: TAGTTGCCATGGTGACAATCAAGATAATCCAGATGA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCAGCTACTGTGGCTCTTaGCAAGACTGTGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSSYCGS*QDCEGE
Trigger: TTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCT...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGGTGGGGCTTCATGTCTaGTGCATTGAGCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVVGLHV*CIEHSG
Trigger: ACCAGAATGCTCAATGCATCAGACATGAAGCCCCAC...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCCATATGTGGAGAGTATaGCTCACTCTCCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAHMWRV*LTLLYC
Trigger: ACAATAAAGGAGAGTGAGTCATACTCTCCACATATG...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATAAGGTAGAACTCCATTaGGTTGCTGGAAAATGCATC +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDKVELH*VAGKCI
Trigger: GATGCATTTTCCAGCAACTCAATGGAGTTCTACCTT...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATACAATGTGTGACCTTTaGCAAGGTCTTGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDTMCDL*QGLVFS
Trigger: ACTGAAGACAAGACCTTGTCAAAGGTCACACATTGT...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCGCCAAGGTGACTTaGTCCACGTCGCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENSAKVT*STSPGA
Trigger: GGCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCT...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR GCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGATGGCCAGGAGCCCGATaGCCTGCGGGGTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGWPGAR*PAGSSA
Trigger: AGCGGAGGACCCCGCAGGGCATCGGGCTCCTGGCCA...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR GCA 90 bp TGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGTCTCCATAGCCAACATCTCCTCTCCTTGTaGATCCACCTCTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: WRQSDGLPTFWVSCLHSQHLLSL*IHLWDV
Trigger: GACGTCCCAGAGGTGGATGCACAAGGAGAGGAGATG...TTGGCTATGGAGACAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR GCA 90 bp AGGCTTCGCAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGCAACCACTCCACCACAGGGCATCTaGATAGGTCTCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: RLRREVARTLPWFPTATTPPQGI*IGLKLL
Trigger: GAGGAGTTTGAGACCTATGCAGATGCCCTGTGGTGG...AGTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR GCA 90 bp ACCACAGGGCATCTGCATAGGTCTCAAACTCCTCTTTCATCTCCTCTCCTTGTGGCCCGGACCCCAGGATaGCCGCTGGAAGGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: TTGHLHRSQTPLSSPLLVARTPG*PLEGQK
Trigger: TTTTTGCCCTTCCAGCGGGCATCCTGGGGTCCGGGC...CACAAGGAGAGGAGATGAAAGAGGAGTTTGAGACCTATGCAGATGCCCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR GCA 90 bp AGGAGGAGTTGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGGGCAGGTTCACTCATTCCTGGGAGATTaGTGGGATGGGAAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: RRSCLNLSRTGSPSGQVHSFLGD*WDGKVN
Trigger: ATTCACCTTCCCATCCCAGCAATCTCCCAGGAATGA...GTGAACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACTCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR GCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATCAAACTTCCCCATCATaGTTTGGTCTTCGATTTCTG +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDQTSPS*FGLRFL
Trigger: CAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTG...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCATCAACCAAATGTCTaGCATAGCTACTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPHQPNV*HSYCGS
Trigger: AGAGCCACAGTAGCTATGGCAGACATTTGGTTGATG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGTATGTCCAATGGAATTaGCACAACTCAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPYVQWN*HNSATE
Trigger: CTCAGTGGCTGAGTTGTGGCAATTCCATTGGACATA...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGAAGTTGAGTCCTGTCTaGTTCTTTGTAGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLKLSPV*FFVAFG
Trigger: ACCAAAAGCTACAAAGAAGCAGACAGGACTCAACTT...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AGGAGGAGTTGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGGGCAGGTTCACTCTATGGCATCTGGATaGTGCCTCCAGCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: RRSCLNLSRTGSPSGQVHSMASG*CLQLFF
Trigger: AAAGAACAGCTGGAGGCAGCATCCAGATGCCATAGA...GTGAACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACTCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp TGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGTCTCCATAGCCAAGTTGTTTCTCTTGACTaGGCGGCTCAGCGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: WRQSDGLPTFWVSCLHSQVVSLD*AAQRGL
Trigger: AAGACCCCGCTGAGCCGCCCAGTCAAGAGAAACAAC...TTGGCTATGGAGACAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTGGCCTTCCCACGTTTTaGGTGTCTTGTCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCGLPTF*VSCLHS
Trigger: GCTATGGAGACAAGACACCCAAAACGTGGGAAGGCC...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGCTTCGCAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGCAACCACTGGCCTTCCCACGTTTTaGGTGTCTTGTCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: RLRREVARTLPWFPTATTGLPTF*VSCLHS
Trigger: GCTATGGAGACAAGACACCCAAAACGTGGGAAGGCC...AGTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CCA 90 bp AGTTGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGGGCAGGTTCACAGGGTCCAATTAAGGAAAAGGTaGCGGCAATCAGACGGCCTT +
Preference number: 4 (lower is better)
Translates to: SCLNLSRTGSPSGQVHRVQLRKR*RQSDGL
Trigger: AAGGCCGTCTGATTGCCGCCACCTTTTCCTTAATTG...GACCCTGTGAACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGAAGGTACTTTATCCTaGAAAGCATGTCGAGATGCC +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIEGTLS*KACRDA
Trigger: GGCATCTCGACATGCTTTCCAGGATAAAGTACCTTC...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTTGGTCTGGCTACATATaGTTCATTCCTGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGWSGYI*FIPGRL
Trigger: CAATCTCCCAGGAATGAACCATATGTAGCCAGACCA...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTTGGTCTGGCTACATATaGTTCATTCCTGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIWSGYI*FIPGRL
Trigger: CAATCTCCCAGGAATGAACCATATGTAGCCAGACCA...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGATGTGGATGGTCTaGCTACATATGGTTCATTCC +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPLMWMV*LHMVHS
Trigger: GGAATGAACCATATGTAGCCAGACCATCCACATCAG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCTTCGATTTCTGATGTaGATGGTCTGGCTACATATG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMLRFLM*MVWLHM
Trigger: CATATGTAGCCAGACCATCCACATCAGAAATCGAAG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGCTTCTCTGCTTCAGCTaGCGAGGAGGTGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKLLCFS*RGGALG
Trigger: ACCAAGGGCACCTCCTCGCCAGCTGAAGCAGAGAAG...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCAGGTCAGCCTGGGAGTaGCAGCTCACTCGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCRSAWE*QLTRES
Trigger: CGACTCCCGAGTGAGCTGCCACTCCCAGGCTGACCT...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGCCCTGCAGGTCAGCCTaGGAGTGGCAGCTCACTCGG +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKPCRSA*EWQLTR
Trigger: CCGAGTGAGCTGCCACTCCCAGGCTGACCTGCAGGG...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTCTCTCCAGCTCCTCGTaGTTGACCGACATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSLSSSS*LTDIRD
Trigger: GTCCCTGATGTCGGTCAACCACGAGGAGCTGGAGAG...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGTGACCTCTTTTAAATaGGCTTATTGGAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIVTSFK*AYWKGS
Trigger: GGACCCCTTCCAATAAGCCCATTTAAAAGAGGTCAC...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGGTGACCTCTTTTAAATaGGCTTATTGGAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPVTSFK*AYWKGS
Trigger: GGACCCCTTCCAATAAGCCCATTTAAAAGAGGTCAC...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGTCCTGCTGGATAAACTaGGTGCTTTCCACGCGACAC +
Preference number: 4 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLSCWIN*VLSTRH
Trigger: GTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGA...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCCTTGGCCTGGGACTTTaGGCTTTGGTTCTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSLGLGL*ALVLSS
Trigger: GGAACTTAGAACCAAAGCCCAAAGTCCCAGGCCAAG...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGGCCATATTGAAGGAGTaGGGAAAAGGCCCAAATAAC +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPAILKE*GKGPNN
Trigger: GTTATTTGGGCCTTTTCCCCACTCCTTCAATATGGC...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATTTTGCACAGCTTCTCTaGAGCTATGAAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDFAQLL*SYEVQS
Trigger: GCTTTGAACTTCATAGCTCCAGAGAAGCTGTGCAAA...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTCAAATACCAGCTATGTaGCATCTTCTGGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGQIPAM*HLLGKH
Trigger: GTGCTTTCCCAGAAGATGCCACATAGCTGGTATTTG...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTCCAGTTGGCTCAGTTTaGAATGGTTTAATATCAGCA +
Preference number: 4 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFPVGSV*NGLISA
Trigger: TGCTGATATTAAACCATTCCAAACTGAGCCAACTGG...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTGTTTAGGGGCCAGTTaGCTCAGTTTGGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVCLGAS*LSLEWF
Trigger: AAACCATTCCAAACTGAGCCAACTGGCCCCTAAACA...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGACAGGTGGTTGTTCTaGGTGATCAAAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDDRWLF*VIKISS
Trigger: AGAAGAGATTTTGATCACCCAGAACAACCACCTGTC...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTAAGACAGCAGGAATCTaGGAGAAGGAACATCATCGT +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIKTAGI*EKEHHR
Trigger: ACGATGATGTTCCTTCTCCCAGATTCCTGCTGTCTT...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp ACCACAGGGCATCTGCATAGGTCTCAAACTCCTCTTTCATCTCCTCTCCTTGTGTCCAGGCAGCCTGAATaGGCTCAGCAGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TTGHLHRSQTPLSSPLLVSRQPE*AQQLAS
Trigger: GGAAGCCAGCTGCTGAGCTCATTCAGGCTGCCTGGA...CACAAGGAGAGGAGATGAAAGAGGAGTTTGAGACCTATGCAGATGCCCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGAGGAAAAGAGACGACTaGTTCATAAAATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLRKRDD*FIKSPC
Trigger: ACATGGAGATTTTATGAATCAGTCGTCTCTTTTCCT...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGAAAACCCATAGGGGCTaGCTTTGTCAATGGTCACCT +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVKTHRG*LCQWSP
Trigger: AGGTGACCATTGACAAAGTCAGCCCCTATGGGTTTT...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTGCACACGCATGCATTTaGTGCAGCCATTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSAHACI*CSHWCP
Trigger: GGGACACCAATGGCTGCATCAAATGCATGCGTGTGC...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCAGTAGGCAGCCCCACTaGTACACAATGTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSSRQPH*YTMWFC
Trigger: ACAAAACCACATTGTGTATCAGTGGGGCTGCCTACT...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TCGGATGGCGGCCTTCAGGGTGGGGATCATGTCTTCGATGGGGAAGTCATTCCCCTCTTGACAAGACTGTaGGGGAGAATAGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SDGGLQGGDHVFDGEVIPLLTRL*GRIAVS
Trigger: TGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAG...GGGAATGACTTCCCCATCGAAGACATGATCCCCACCCTGAAGGCCGCCATCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGTAACTGTTGACATGTaGGTTGAAAGGAACCTATCT +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMVTVDM*VERNLS
Trigger: AGATAGGTTCCTTTCAACTCACATGTCAACAGTTAC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTCACTTTCAGCCATATTaGAGGAGTGGGGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCHFQPY*RSGEKA
Trigger: GGCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTG...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGCACTTTCAGCCATATTaGAGGAGTGGGGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLHFQPY*RSGEKA
Trigger: GGCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTG...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTAAGGTAGAACTCCATTaGGTTGCTGGAAAATGCATC +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGKVELH*VAGKCI
Trigger: GATGCATTTTCCAGCAACTCAATGGAGTTCTACCTT...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGTTTCATGTCACATTGTaGCCCAGAAAGACCAAATAC +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMFHVTL*PRKTKY
Trigger: GTATTTGGTCTTTCTGGGTCACAATGTGACATGAAA...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGCTTTCACTTCAGCCTaGCTCAGGAGAACTGAAACA +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSAFTSA*LRRTET
Trigger: TGTTTCAGTTCTCCTGAGTCAGGCTGAAGTGAAAGC...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTGTTGTTCTAGAACTTaGCCATCCTTCTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAACCSRT*PSFFLN
Trigger: ATTCAGAAAGAAGGATGGTCAAGTTCTAGAACAACA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGACTGAGCTGGGCTTTTaGCTACCTCATTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVTELGF*LPHCKP
Trigger: TGGCTTACAATGAGGTAGTCAAAAGCCCAGCTCAGT...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGCATCTCCTCTCCTTGTaGATCCACCTCTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKHLLSL*IHLWDV
Trigger: GACGTCCCAGAGGTGGATGCACAAGGAGAGGAGATG...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTTCATGCGGAAGGCCGTaGGGAAACGCTCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRSCGRP*GNALYC
Trigger: ACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGA...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLKRRLS*GRPCGN
Trigger: GTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTT...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCTCATTCCTGGGAGATTaGTGGGATGGGAAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSSFLGD*WDGKVN
Trigger: ATTCACCTTCCCATCCCAGCAATCTCCCAGGAATGA...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGCAAACTTCCCCATCATaGTTTGGTCTTCGATTTCTG +
Preference number: 4 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVQTSPS*FGLRFL
Trigger: CAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTG...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAATCCGTGACCTGCACCTaGAACCGTTCCATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQSVTCT*NRSMCC
Trigger: GCAACACATGGAACGGTTGCAGGTGCAGGTCACGGA...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGGCTGTGGGAAGCCCCTaGCTGGGTGGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWAVGSP*LGGATT
Trigger: CGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCGCTGTGGGAAGCCCCTaGCTGGGTGGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIAVGSP*LGGATT
Trigger: CGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGGCTGTGGGAAGCCCCTaGCTGGGTGGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGAVGSP*LGGATT
Trigger: CGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGTGTGTGTTTTCTCCCTaGCAATTCATAACTCATCAG +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMCVFSP*QFITHQ
Trigger: CTGATGAGTTATGAATTGGCAGGGAGAAAACACACA...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGACTGAACTCAGCTCCTaGCCAGAGGGGCACTTCACT +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLTELSS*PEGHFT
Trigger: AGTGAAGTGCCCCTCTGGGCAGGAGCTGAGTTCAGT...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGGCTGCTCACAATGTCTaGCCTTGGCCTGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLAAHNV*PWPGTL
Trigger: CAAAGTCCCAGGCCAAGGGCAGACATTGTGAGCAGC...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATGGTGGAGGGGAGGAGTaGCTGCATGGCCATGGGATT +
Preference number: 4 (lower is better)
Translates to: DNMGILWDKARGPKLCSNGGGEE*LHGHGI
Trigger: AATCCCATGGCCATGCAGGCACTCCTCCCCTCCACC...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTGACCCAGCTTTTGGCTaGATGCTGCCTCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSDPAFG*MLPPAV
Trigger: AACAGCTGGAGGCAGCATCCAGCCAAAAGCTGGGTC...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGAGACCCAGCTTTTaGCTGGATGCTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSKRPSF*LDAASS
Trigger: GCTGGAGGCAGCATCCAGCCAAAAGCTGGGTCTCTT...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGGATCATGTCTTCGATaGGGAAGTCATTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSGSCLR*GSHSHS
Trigger: GCTATGGGAATGACTTCCCCATCGAAGACATGATCC...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTCTTCGATTTCTGATGTaGATGGTCTGGCTACATATG +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGLRFLM*MVWLHM
Trigger: CATATGTAGCCAGACCATCCACATCAGAAATCGAAG...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTTTCCCCATCATGCTTTaGTCTTCGATTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIFPIML*SSISDV
Trigger: CACATCAGAAATCGAAGACCAAAGCATGATGGGGAA...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTTTCCCCATCATGCTTTaGTCTTCGATTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGFPIML*SSISDV
Trigger: CACATCAGAAATCGAAGACCAAAGCATGATGGGGAA...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGAGGTCAGCCTGGGAGTaGCAGCTCACTCGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKRSAWE*QLTRES
Trigger: CGACTCCCGAGTGAGCTGCCACTCCCAGGCTGACCT...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGAAATCCCATCCCCTGTaGACGACAGAGGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKKSHPL*TTEAWS
Trigger: GCTCCATGCCTCTGTCGTCCACAGGGGATGGGATTT...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGGGCCTGTCTCAGAATAGTTGCAGATGATGGTTTTCAAATCGGAATACCTGTTTGGGAAGCCCCTGCCTaGGTGGGGCCACCACGCACA +
Preference number: 4 (lower is better)
Translates to: GACLRIVADDGFQIGIPVWEAPA*VGPPRT
Trigger: TGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCA...AACAGGTATTCCGATTTGAAAACCATCATCTGCAACTATTCTGAGACAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCAACAGACAAATAGCATaGCTCATCAGTAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAANRQIA*LISNFS
Trigger: GGAGAAATTACTGATGAGCCATGCTATTTGTCTGTT...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATCAACTTGAGCAGGTTTaGTTTGCCTTTCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDQLEQV*FAFLEY
Trigger: ATATTCCAGAAAGGCAAACCAAACCTGCTCAAGTTG...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTCTTGACTGGGCTGATTaGATCATTGCCATTTTGATG +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGLDWAD*IIAILM
Trigger: CATCAAAATGGCAATGATCCAATCAGCCCAGTCAAG...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTATTCACAAGGACTGCTaGGGAGCCCTGCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRIHKDC*GALPNS
Trigger: AGAATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAAT...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGAACTTGGCCACCACCTaGACTCTTAACCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKNLATT*TLNPQG
Trigger: CCCCTGAGGGTTAAGAGTCCAGGTGGTGGCCAAGTT...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAAGCGCAGGCTTCGCAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGGAAATGAAGAAAGGATaGGTGTCAGGAAACCGATGT +
Preference number: 4 (lower is better)
Translates to: GSAGFAGRWPEHCLGFPQEMKKG*VSGNRC
Trigger: ACATCGGTTTCCTGACACTCATCCTTTCTTCATTTC...CTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCTGCGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp GTGCATCCACCTCTGGGACGTCTTTCTCAACCAGGTAGACAAGAAATGAAGAAACAATGGTGGCCAGTGTaGTCAGGCCCCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: VHPPLGRLSQPGRQEMKKQWWPV*SGPTTG
Trigger: CCCTGTGGTGGGGCCTGATCACACTGGCCACCATTG...TTTCTTCATTTCTTGTCTACCTGGTTGAGAAAGACGTCCCAGAGGTGGATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGATATCTATTCTCGTCTaGAGGTACTTTATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMISILV*RYFILE
Trigger: TTCCAGGATAAAGTACCTTCAGACGAGAATAGATAT...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTTGGGAAGGTGAATGCTaGCCCTTTCTGAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRWEGEC*PFLRLL
Trigger: AAGAAGTCTCAGAAAGGGTCAGCATTCACCTTCCCA...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGTTGGGTAATACTCCGTaGCCTGCACCTGCAACCGTT +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKLGNTP*PAPATV
Trigger: AACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAA...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGAATAGTTGCAGATaGTGGTTTTCAAATCGGAAT +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMQNSCR*WFSNRN
Trigger: ATTCCGATTTGAAAACCATCATCTGCAACTATTCTG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTTCATCTGGATTATCTTaGTTGTCACCATGGCAACTA +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGSSGLS*LSPWQL
Trigger: TAGTTGCCATGGTGACAATCAAGATAATCCAGATGA...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGGGAGGAGCTAGGGCCTaGTTTGAGAGGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQGGARA*FERKKG
Trigger: CCCCTTCTTCCTCTCAAATCAGGCCCTAGCTCCTCC...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAGAGACACAACTGTTCTaGGCTTTTGGCCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQETQLF*AFGLPQ
Trigger: CTGTGGGAGGCCAAAAGCTCAGAACAGTTGTGTCTC...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTCCACCACAGGGCATCTaGATAGGTCTCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSPPQGI*IGLKLL
Trigger: GAGGAGTTTGAGACCTATGCAGATGCCCTGTGGTGG...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTTGCCCGGCAGAATACTaGTCAATCACATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCCPAEY*SITSFT
Trigger: TGTGAAGGATGTGATTGAGCAGTATTCTGCCGGGCA...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAGCTGTGGGAAGCCCCTaGCTGGGTGGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSAVGSP*LGGATT
Trigger: CGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACGAGGGGAGGAGTGCCTaGATGGCCATGGGATTGTTC +
Preference number: 4 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNEGRSA*MAMGLF
Trigger: GAACAATCCCATGGCCATGCAGGCACTCCTCCCCTC...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGATGAGTTCTTTGCTGTaGGCACAGATGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLMSSLL*AQMAEP
Trigger: GGGCTCAGCCATCTGTGCCCACAGCAAAGAACTCAT...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGATGAGTTCTTTGCTGTaGGCACAGATGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKMSSLL*AQMAEP
Trigger: GGGCTCAGCCATCTGTGCCCACAGCAAAGAACTCAT...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTGGCCTTCCCACGTTTTaGGTGTCTTGTCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSGLPTF*VSCLHS
Trigger: GCTATGGAGACAAGACACCCAAAACGTGGGAAGGCC...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGTGGCGGCCTTCAGGGTaGGGATCATGTCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQWRPSG*GSCLRW
Trigger: CCATCGAAGACATGATCCCCACCCTGAAGGCCGCCA...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGAAGGTACTTTATCCTaGAAAGCATGTCGAGATGCC +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSEGTLS*KACRDA
Trigger: GGCATCTCGACATGCTTTCCAGGATAAAGTACCTTC...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGAGACTTCTTGTGTTTTaGCGTGGAGGGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKRLLVF*RGGRSR
Trigger: CCTGGACCTCCCTCCACGCCAAAACACAAGAAGTCT...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGTTTAAATGGGCTTATTaGAAGGGGTCCATACTGAAT +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMFKWAY*KGSILN
Trigger: ATTCAGTATGGACCCCTTCCAATAAGCCCATTTAAA...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGTGGGAAGCCCCTGCCTaGGTGGGGCCACCACGCACA +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEWEAPA*VGPPRT
Trigger: TGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCA...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCACTCTCCTTTATTGTTaGTTTCCAGTAACTCATGTA +
Preference number: 4 (lower is better)
Translates to: GSPCLGGATTHTHAFDAATLLYC*FPVTHV
Trigger: TACATGAGTTACTGGAAACCAACAATAAAGGAGAGT...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATACTCCATTGAGTTGCTaGAAAATGCATCATCTATTG +
Preference number: 4 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDTPLSC*KMHHLL
Trigger: CAATAGATGATGCATTTTCCAGCAACTCAATGGAGT...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTCAACTTGAGCAGGTTTaGTTTGCCTTTCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGQLEQV*FAFLEY
Trigger: ATATTCCAGAAAGGCAAACCAAACCTGCTCAAGTTG...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGGTGGTCATGTCATCTTaGGTCATGTTAACCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVVVMSS*VMLTSS
Trigger: GGAACTGGTTAACATGACCCAAGATGACATGACCAC...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGACGATTGCAATTTCTTaGGCAAGTTTCAGAACGACT +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPTIAIS*ASFRTT
Trigger: AGTCGTTCTGAAACTTGCCCAAGAAATTGCAATCGT...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTCTATGTGGCATCTTCTaGGAAAGCACAGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSLCGIF*ESTGVG
Trigger: TCCCACCCCTGTGCTTTCCCAGAAGATGCCACATAG...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCCAAATACCAGCTATGTaGCATCTTCTGGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSQIPAM*HLLGKH
Trigger: GTGCTTTCCCAGAAGATGCCACATAGCTGGTATTTG...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAAAAGCCGTGAAAGCCTaGGAACAAATCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQKAVKA*EQISPG
Trigger: CCCTGGGGAGATTTGTTCCCAGGCTTTCACGGCTTT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGTTTGTCTCTAACATCTaGAGCAAAGATCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPFVSNI*SKDQKT
Trigger: GGTCTTCTGATCTTTGCTCCAGATGTTAGAGACAAA...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGGACTTTCTTCTATaGCATCTGGATGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCKDFLL*HLDAAS
Trigger: GGAGGCAGCATCCAGATGCCATAGAAGAAAGTCCTT...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGGTGGGCACAGATGGCTaGGCCCAGAAGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVVGTDG*AQKLPG
Trigger: ACCTGGAAGCTTCTGGGCTCAGCCATCTGTGCCCAC...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGAAATGAAGAAAGGATaGGTGTCAGGAAACCGATGT +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSEMKKG*VSGNRC
Trigger: ACATCGGTTTCCTGACACTCATCCTTTCTTCATTTC...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GTGCATCCACCTCTGGGACGTCTTTCTCAACCAGGTAGACAAGAAATGAAGAAATACCTCCAGGCAGCCTaGATGAGCTCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VHPPLGRLSQPGRQEMKKYLQAA*MSSAAG
Trigger: GCCAGCTGCTGAGCTCATTCAGGCTGCCTGGAGGTA...TTTCTTCATTTCTTGTCTACCTGGTTGAGAAAGACGTCCCAGAGGTGGATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTAGGAAAAGAGACGACTaGTTCATAAAATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGRKRDD*FIKSPC
Trigger: ACATGGAGATTTTATGAATCAGTCGTCTCTTTTCCT...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTTCTTCCCCATGTCCTaGACCTGTCTTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVFFPMS*TCLSTF
Trigger: AAAAGTTGAAAGACAGGTTCAGGACATGGGGAAGAA...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAATTGGGTAATACTCCGTaGCCTGCACCTGCAACCGTT +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKLGNTP*PAPATV
Trigger: AACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAA...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCTGTCACTGTCTCGCGTaGTGCTACGTCTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLCHCLA*CYVSAG
Trigger: CCCGGCAGAGACGTAGCATCACGCGAGACAGTGACA...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGTGTCACTGTCTCGCGTaGTGCTACGTCTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVCHCLA*CYVSAG
Trigger: CCCGGCAGAGACGTAGCATCACGCGAGACAGTGACA...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTGGAGCCGCTGGGCGTaGAGGGGTCCGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGWSRWA*RGPCLC
Trigger: ACACAGACACGGACCCCTTCACGCCCAGCGGCTCCA...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCGCACACGCATGCATTTaGTGCAGCCATTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCAHACI*CSHWCP
Trigger: GGGACACCAATGGCTGCATCAAATGCATGCGTGTGC...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGTGCCCCAGGAGAATTTaGTCTGCAGGTTCCCATAAG +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLCPRRI*SAGSHK
Trigger: CTTATGGGAACCTGCAGATCAAATTCTCCTGGGGCA...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTAAAGATCAGAAGACCTaGGTTCCAGATTTATTCTGT +
Preference number: 4 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGKDQKT*VPDLFC
Trigger: ACAGAATAAATCTGGAACTCAGGTCTTCTGATCTTT...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTTTCTGGGCTCAATCGTaGTGCTTTGATTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCFWAQS*CFDFTW
Trigger: CCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAA...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCAAGGCATGACTGTTGCTaGATGAGCCCAAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPARHDCC*MSPSDG
Trigger: CCCATCACTTGGGCTCATTCAGCAACAGTCATGCCT...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACAAGGGGGAGAGAGAATaGGCTTTCCAGGTACACGGG +
Preference number: 4 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNKGERE*AFQVHG
Trigger: CCCGTGTACCTGGAAAGCTCATTCTCTCTCCCCCTT...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTAAGGAGCCCGATGCCCTaGGGGGTCCTCCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLRSPMP*GVLRCP
Trigger: GGGGCAGCGGAGGACCCCGCAGGGCATCGGGCTCCT...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR GCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGCAGCTTTTGGCTGGATaGTGCCTCCAGCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKQLLAG*CLQLFF
Trigger: AAAGAACAGCTGGAGGCAGCATCCAGCCAAAAGCTG...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR GCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGGAAAGCATGTCGAGATaGCCGGCAGAATACTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMESMSR*PAEYCS
Trigger: TGAGCAGTATTCTGCCGGGCATCTCGACATGCTTTC...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGTTAAACTACTTTCTCTaGTTACCAAACCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMLNYFL*LPNQNP
Trigger: TGGGTTTTGGTTTGGTAAGCAGAGAAAGTAGTTTAA...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTAGAACTCCATTGAGTTaGTGGAAAATGCATCATCTA +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIRTPLS*WKMHHL
Trigger: TAGATGATGCATTTTCCAGCAACTCAATGGAGTTCT...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGGAACTTCCAGTGCACTaGAAAGTTCTGGGCATATAT +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVELPVH*KVLGIY
Trigger: ATATATGCCCAGAACTTTGCAGTGCACTGGAAGTTC...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTTATGTCCAATGGAATTaGCACAACTCAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRYVQWN*HNSATE
Trigger: CTCAGTGGCTGAGTTGTGGCAATTCCATTGGACATA...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGACCCAGAGATCCCAGTaGAAAGGGACACCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMTQRSQ*KGTPLV
Trigger: TACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGT...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGGGGATTCACAAGGACTaGTGGGGAGCCCTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQGIHKD*WGALPN
Trigger: ATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAATCCC...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGGGCTGCCCCAAATCTTaGAACTTGGCCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKGCPKS*NLATTW
Trigger: CCAGGTGGTGGCCAAGTTGCAAGATTTGGGGCAGCC...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGTGCACAGGGGCTTCCTaGCAAACTTCAGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVCTGAS*QTSVGP
Trigger: GGGGCCGACTGAAGTTTGCCAGGAAGCCCCTGTGCA...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTTTGTGCATCCACCTCTaGGACGTCTTTCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSLCIHL*DVFLNQ
Trigger: CTGGTTGAGAAAGACGTCCCAGAGGTGGATGCACAA...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCGACCCAGCTTTTGGCTaGATGCTGCCTCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCDPAFG*MLPPAV
Trigger: AACAGCTGGAGGCAGCATCCAGCCAAAAGCTGGGTC...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGAAGAGACCCAGCTTTTaGCTGGATGCTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQKRPSF*LDAASS
Trigger: GCTGGAGGCAGCATCCAGCCAAAAGCTGGGTCTCTT...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGACCCTGTCTTCCGCCATaGGGTCACCTGTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGPCLPP*GHLSRH
Trigger: ATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGG...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGCTTCGATTTCTGATGTaGATGGTCTGGCTACATATG +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVLRFLM*MVWLHM
Trigger: CATATGTAGCCAGACCATCCACATCAGAAATCGAAG...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGAAATCCCATCCCCTGTaGACGACAGAGGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQKSHPL*TTEAWS
Trigger: GCTCCATGCCTCTGTCGTCCACAGGGGATGGGATTT...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTGTGACCTCTTTTAAATaGGCTTATTGGAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRVTSFK*AYWKGS
Trigger: GGACCCCTTCCAATAAGCCCATTTAAAAGAGGTCAC...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAATCAAATGGAAGCCCGTaGGGCTTCATGTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQSNGSP*GFMSDA
Trigger: TGCATCAGACATGAAGCCCCACGGGCTTCCATTTGA...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCCGACTAGTATATCTGTaGTCATGTCATCTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSRLVYL*SCHLGS
Trigger: TGACCCAAGATGACATGACCACAGATATACTAGTCG...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATCCACTCAGCCTTGACTaGGCTGATTGGATCATTGCC +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDPLSLD*ADWIIA
Trigger: GGCAATGATCCAATCAGCCCAGTCAAGGCTGAGTGG...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATCTATGTGGCATCTTCTaGGAAAGCACAGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDLCGIF*ESTGVG
Trigger: TCCCACCCCTGTGCTTTCCCAGAAGATGCCACATAG...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGAGCCCTGCCAAATTCTaGCCGATTTATCCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLSPAKF*PIYPEN
Trigger: GTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCT...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTGGCGTTGTTTCTCTTaGCTGGGCGGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGWRCFS*LGGSAG
Trigger: CCCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCA...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR TCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCAATGGTGGCCAGTGTaGTCAGGCCCCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGQWWPV*SGPTTG
Trigger: CCCTGTGGTGGGGCCTGATCACACTGGCCACCATTG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGATCCAGGCAGCCTGAATaGGCTCAGCAGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGSRQPE*AQQLAS
Trigger: GGAAGCCAGCTGCTGAGCTCATTCAGGCTGCCTGGA...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGTGGGAAGGTGAATGCTaGCCCTTTCTGAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMWEGEC*PFLRLL
Trigger: AAGAAGTCTCAGAAAGGGTCAGCATTCACCTTCCCA...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTTTCTTCCCCATGTCCTaGACCTGTCTTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCFFPMS*TCLSTF
Trigger: AAAAGTTGAAAGACAGGTTCAGGACATGGGGAAGAA...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTGGAGGGGTCAGCCAGTaGCCTCTTTTAAATGGGCTT +
Preference number: 4 (lower is better)
Translates to: NETQRSQCKGTPLVKLATGGVSQ*PLLNGL
Trigger: AAGCCCATTTAAAAGAGGTCACTGGCTGACCCCTCC...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCACAAGCTGTGTTCAAATaGGACCCAGAGATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAQAVFK*DPEIPV
Trigger: CACTGGGATCTCTGGGTCTCATTTGAACACAGCTTG...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGGCTTTCACTTCAGCCTaGCTCAGGAGAACTGAAACA +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKAFTSA*LRRTET
Trigger: TGTTTCAGTTCTCCTGAGTCAGGCTGAAGTGAAAGC...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCAAGGGGGAGAGAGAATaGGCTTTCCAGGTACACGGG +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAKGERE*AFQVHG
Trigger: CCCGTGTACCTGGAAAGCTCATTCTCTCTCCCCCTT...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAACTCAAAGGACCTGCTaGACAGACAAGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKTQRTC*TDKRNS
Trigger: GCTGTTCCTCTTGTCTGTTCAGCAGGTCCTTTGAGT...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGGAGACACAACTGTTCTaGGCTTTTGGCCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQETQLF*AFGLPQ
Trigger: CTGTGGGAGGCCAAAAGCTCAGAACAGTTGTGTCTC...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCGGACAATCAGGAACCTaGAACACGCTTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCGQSGT*NTLPPS
Trigger: AGAGGGAGGAAGCGTGTTTCAGGTTCCTGATTGTCC...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR GCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAAGATCAAAGTTTGGATaGGCCGGTACTTGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQRSKFG*AGTWRC
Trigger: ACAACGCCAAGTACCGGCGCATCCAAACTTTGATCT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR GCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGGCCCGGACCCCAGGATaGCCGCTGGAAGGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGARTPG*PLEGQK
Trigger: TTTTTGCCCTTCCAGCGGGCATCCTGGGGTCCGGGC...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGCCCGGACCCCAGGATaGCCGCTGGAAGGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEARTPG*PLEGQK
Trigger: TTTTTGCCCTTCCAGCGGGCATCCTGGGGTCCGGGC...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGAACCGTTCCATGTGTTaGATGTGCATATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKNRSMC*MCISTR
Trigger: CCTCGTGGATATGCACATGCAACACATGGAACGGTT...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGTCTCTGAACTTCCAGTaGACTGCAAAGTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMSLNFQ*TAKFWA
Trigger: TGCCCAGAACTTTGCAGTGCACTGGAAGTTCAGAGA...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAATTCCCTTTCTCAACTaGACCCAGCAGCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQIPFLN*TQQQWF
Trigger: AAACCACTGCTGCTGGGTGCAGTTGAGAAAGGGAAT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTCCTTGGCAAAATGGCTaGCCCAAATCTTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSPWQNG*PKSCNL
Trigger: CAAGTTGCAAGATTTGGGGCAGCCATTTTGCCAAGG...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGGGTCCTCCATGCCTGTaGCACCATGGCCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWGPPCL*HHGPPA
Trigger: AGCAGGAGGGCCATGGTGGCACAGGCATGGAGGACC...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTTGCACAGGGGCTTCCTaGCAAACTTCAGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGCTGAS*QTSVGP
Trigger: GGGGCCGACTGAAGTTTGCCAGGAAGCCCCTGTGCA...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGATGCACAGGGGCTTCCTaGCAAACTTCAGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGCTGAS*QTSVGP
Trigger: GGGGCCGACTGAAGTTTGCCAGGAAGCCCCTGTGCA...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCCCTGTCTTCCGCCATaGGGTCACCTGTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGPCLPP*GHLSRH
Trigger: ATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTGGATCATGTCTTCGATaGGGAAGTCATTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSGSCLR*GSHSHS
Trigger: GCTATGGGAATGACTTCCCCATCGAAGACATGATCC...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGAACCTTTCCAGAACTaGGTCCCCCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGEPFQN*VPLGAG
Trigger: ACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTC...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCACCCTGCAGGTCAGCCTaGGAGTGGCAGCTCACTCGG +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSPCRSA*EWQLTR
Trigger: CCGAGTGAGCTGCCACTCCCAGGCTGACCTGCAGGG...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GTGTCTGTGTCCGTCTCACCCTCGGCGAGGTACCGCTTCTCCCTCATCCAGCTCAAAATTGGACGGTTCTaGAAATTTTGCCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: VSVSVSPSARYRFSLIQLKIGRF*KFCLFT
Trigger: TGTAAACAGGCAAAATTTCCAGAACCGTCCAATTTT...GAGCTGGATGAGGGAGAAGCGGTACCTCGCCGAGGGTGAGACGGACACAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp AGTTGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGGGCAGGTTCACAGGGTCACTCCATTGAGTTGCTaGAAAATGCATCATCTATTG +
Preference number: 4 (lower is better)
Translates to: SCLNLSRTGSPSGQVHRVTPLSC*KMHHLL
Trigger: CAATAGATGATGCATTTTCCAGCAACTCAATGGAGT...GACCCTGTGAACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCACAATCTCTGCTGTCCTaGTCTTATGATCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAQSLLS*SYDPAG
Trigger: CCCTGCTGGATCATAAGACCAGGACAGCAGAGATTG...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATGGGGTGGGAGAATCCTaGGGTGTGTTTGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENGVGES*GVFGST
Trigger: AGTGCTGCCAAACACACCCCAGGATTCTCCCACCCC...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTGTACTATATGTCCAATaGAATTGCCACAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRVLYVQ*NCHNSA
Trigger: GGCTGAGTTGTGGCAATTCCATTGGACATATAGTAC...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTACAGTTGACTTTCCTTaGGAAATCATGAGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: SPCLGGATTHTHAFDAAITVDFP*EIMSLL
Trigger: TAAAAGACTCATGATTTCCCAAGGAAAGTCAACTGT...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGAACATGGGGATTCTCTaGGACAAGGCAAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQNMGIL*DKARGP
Trigger: GGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTT...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp AAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATaGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KGPNNPCPLSFR*PACQMEARGAS
Trigger: TGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGTCCAGGCAGCCTGAATaGGCTCAGCAGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKESRQPE*AQQLAS
Trigger: GGAAGCCAGCTGCTGAGCTCATTCAGGCTGCCTGGA...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATGTCCTGAACCTGTCTTTCAACTTTTACAAACTTCCCCATCATGCTTTGGTCTCCAGGCAGCCTGAATaGGCTCAGCAGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HVLNLSFNFYKLPHHALVSRQPE*AQQLAS
Trigger: GGAAGCCAGCTGCTGAGCTCATTCAGGCTGCCTGGA...GACCAAAGCATGATGGGGAAGTTTGTAAAAGTTGAAAGACAGGTTCAGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGGCTGGGATGGGAAGGTaGATGCTGACCCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVAGMGR*MLTLSE
Trigger: CTCAGAAAGGGTCAGCATTCACCTTCCCATCCCAGC...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTCCAGCTCCTCGTGGTTaGCCGACATCAGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVPAPRG*PTSGTE
Trigger: CTCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGG...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGGGAAGGGGTCCATACTaGATCAGAAATCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKGRGPY*IRNPIP
Trigger: GGGGATGGGATTTCTGATTCAGTATGGACCCCTTCC...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGAGCACTTTGTTGTGGTaGCATGGGGAGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKSTLLW*HGEEEA
Trigger: AGCCTCTTCCTCCCCATGTCACCACAACAAAGTGCT...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATCACTTTCAGCCATATTaGAGGAGTGGGGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: DNMGILWDKARGPKLCSNHFQPY*RSGEKA
Trigger: GGCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTG...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGTGTGAGCCATATTGTTaGGATTGTCTGTGCATAGGC +
Preference number: 4 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMCEPYC*DCLCIG
Trigger: GCCTATGCACAGACAATCTCAACAATATGGCTCACA...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTAACATCTTTCTCTTaGAATAGGTGCTGTGTCATA +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSVTSFS*NRCCVI
Trigger: TATGACACAGCACCTATTTCAAGAGAAAGATGTTAC...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCAGCCTTCAAGGACAAGTaGGGACATGAAGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAAFKDK*GHEANS
Trigger: GGAATTTGCTTCATGTCCTCACTTGTCCTTGAAGGC...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAGCCACCATGCACAGTTaGCTTTCCTTGGGAAATCAT +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKATMHS*LSLGNH
Trigger: ATGATTTCCCAAGGAAAGTCAACTGTGCATGGTGGC...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTATGCAACCTAAGGCATaGCTGTTGCTGAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: NETQRSQCKGTPLVKLATMQPKA*LLLNEP
Trigger: GGGCTCATTCAGCAACAGTCATGCCTTAGGTTGCAT...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTGAACTCATGGGTCTGTaGTCATTTTACTGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCELMGL*SFYCKA
Trigger: AGCTTTACAGTAAAATGATCACAGACCCATGAGTTC...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTACTCAAAGGACCTGCTaGACAGACAAGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: NETQRSQCKGTPLVKLATTQRTC*TDKRNS
Trigger: GCTGTTCCTCTTGTCTGTTCAGCAGGTCCTTTGAGT...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLKRRLS*GRPCGN
Trigger: GTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTT...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGGTCCTCCTTCTTCTCTaGTTCAGCTGGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVVLLLL*FSWRGG
Trigger: ACCTCCTCGCCAGCTGAAGCAGAGAAGAAGGAGGAC...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTCATCAACCAAATGTCTaGCATAGCTACTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSHQPNV*HSYCGS
Trigger: AGAGCCACAGTAGCTATGGCAGACATTTGGTTGATG...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAACATCAACCAAATGTCTaGCATAGCTACTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQHQPNV*HSYCGS
Trigger: AGAGCCACAGTAGCTATGGCAGACATTTGGTTGATG...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAATCTCTGAACTTCCAGTaGACTGCAAAGTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKSLNFQ*TAKFWA
Trigger: TGCCCAGAACTTTGCAGTGCACTGGAAGTTCAGAGA...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGGCATTAGTGAGGGGCTaGCTGCTGGCTTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVALVRG*LLACLG
Trigger: CCCTAAACAAGCCAGCAGGCAGCCCCTCACTAATGC...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGGGGATTCACAAGGACTaGTGGGGAGCCCTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVGIHKD*WGALPN
Trigger: ATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAATCCC...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAGGCTTCGCAGGGAGGTaGCCAGAACATTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGGFAGR*PEHCLG
Trigger: ACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCC...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGATGGCGGCCTTCAGGGTaGGGATCATGTCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGWRPSG*GSCLRW
Trigger: CCATCGAAGACATGATCCCCACCCTGAAGGCCGCCA...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTGAAGGTACTTTATCCTaGAAAGCATGTCGAGATGCC +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSEGTLS*KACRDA
Trigger: GGCATCTCGACATGCTTTCCAGGATAAAGTACCTTC...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGGAAGGTACTTTATCCTaGAAAGCATGTCGAGATGCC +
Preference number: 4 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMEGTLS*KACRDA
Trigger: GGCATCTCGACATGCTTTCCAGGATAAAGTACCTTC...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATTTCCTGGGAGATTGCTaGGATGGGAAGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: DNMGILWDKARGPKLCSNFLGDC*DGKVNA
Trigger: AGCATTCACCTTCCCATCCCAGCAATCTCCCAGGAA...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCTTCCTGGGAGATTGCTaGGATGGGAAGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCFLGDC*DGKVNA
Trigger: AGCATTCACCTTCCCATCCCAGCAATCTCCCAGGAA...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGTGGTCTGGCTACATATaGTTCATTCCTGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKWSGYI*FIPGRL
Trigger: CAATCTCCCAGGAATGAACCATATGTAGCCAGACCA...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGCTGATGTGGATGGTCTaGCTACATATGGTTCATTCC +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLLMWMV*LHMVHS
Trigger: GGAATGAACCATATGTAGCCAGACCATCCACATCAG...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGCTGATGTGGATGGTCTaGCTACATATGGTTCATTCC +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKLMWMV*LHMVHS
Trigger: GGAATGAACCATATGTAGCCAGACCATCCACATCAG...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGAACCTTTCCAGAACTaGGTCCCCCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEEPFQN*VPLGAG
Trigger: ACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTC...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGAACAGACAAATAGCATaGCTCATCAGTAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVNRQIA*LISNFS
Trigger: GGAGAAATTACTGATGAGCCATGCTATTTGTCTGTT...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGCTGACTTTTGAGTCCTaGTTCTCTATGGGACAACTG +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKLTFES*FSMGQL
Trigger: CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAG...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCTCCTGCTGGATAAACTaGGTGCTTTCCACGCGACAC +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEASCWIN*VLSTRH
Trigger: GTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGA...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTGGGAAAGCACAGGGGTaGGAGAATCCTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGGKAQG*ENPGVC
Trigger: ACACACCCCAGGATTCTCCCACCCCTGTGCTTTCCC...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCATTCACAAGGACTGCTaGGGAGCCCTGCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCIHKDC*GALPNS
Trigger: AGAATTTGGCAGGGCTCCCCAGCAGTCCTTGTGAAT...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGCTGACCTCACTTTTGTaGGCAGAGGAAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQLTSLL*AEEEKG
Trigger: TCCCTTCTCTTCCTCTGCCCACAAAAGTGAGGTCAG...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTATTACCAGATCAGGTTaGCTTCCATGGGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSITRSG*LPWETL
Trigger: CAAGGTTTCCCATGGAAGCCAACCTGATCTGGTAAT...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTCAAATCTCTGATCCTTaGCAAAATGGCTGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSQISDP*QNGCPK
Trigger: TTTGGGGCAGCCATTTTGCCAAGGATCAGAGATTTG...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp AAGGAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTaGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KEWGKGPNNPCP*SFRLPACQMEA
Trigger: GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CAA 72 bp TGCATAGGTCTCAAACTCCTCTTTCATCTCCTCTCCTaGTGCATCCACCTCTGGGACGTCTTTCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: CIGLKLLFHLLS*CIHLWDVFLNQ
Trigger: CTGGTTGAGAAAGACGTCCCAGAGGTGGATGCACAAGGAGAGGAGATGAAAGAGGAGTTTGAGACCTATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR TCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTGAAATGAAGAAAGGATaGGTGTCAGGAAACCGATGT +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSEMKKG*VSGNRC
Trigger: ACATCGGTTTCCTGACACTCATCCTTTCTTCATTTC...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGATACCTCCAGGCAGCCTaGATGAGCTCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRYLQAA*MSSAAG
Trigger: GCCAGCTGCTGAGCTCATTCAGGCTGCCTGGAGGTA...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATTGGGAAGGTGAATGCTaGCCCTTTCTGAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: DNMGILWDKARGPKLCSNWEGEC*PFLRLL
Trigger: AAGAAGTCTCAGAAAGGGTCAGCATTCACCTTCCCA...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGTTCTTCCCCATGTCCTaGACCTGTCTTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLFFPMS*TCLSTF
Trigger: AAAAGTTGAAAGACAGGTTCAGGACATGGGGAAGAA...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTCAGAATAGTTGCAGATaGTGGTTTTCAAATCGGAAT +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCQNSCR*WFSNRN
Trigger: ATTCCGATTTGAAAACCATCATCTGCAACTATTCTG...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCACCAGCTCCTCGTGGTTaGCCGACATCAGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSPAPRG*PTSGTE
Trigger: CTCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGG...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTTGTCCTGGGAGATGCTaGAGCCACTTGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGCPGRC*SHLETS
Trigger: AGAGGTCTCCAAGTGGCTTCAGCATCTCCCAGGACA...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATTGTGAGCCATATTGTTaGGATTGTCTGTGCATAGGC +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDCEPYC*DCLCIG
Trigger: GCCTATGCACAGACAATCTCAACAATATGGCTCACA...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAAGTAACACCAAAGACTaGGACAATGAAGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQSNTKD*DNEVHA
Trigger: TGCATGGACTTCATTGTCTCAGTCTTTGGTGTTACT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCCCACAACTCAGCCACTaGGATCCAACATTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLPQLSH*DPTFLP
Trigger: AGGCAGGAATGTTGGATCTCAGTGGCTGAGTTGTGG...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTCTGAGGTTAAAGCCGTaGAAGCCTGGGAACAAATCT +
Preference number: 4 (lower is better)
Translates to: NETQRSQCKGTPLVKLATLRLKP*KPGNKS
Trigger: AGATTTGTTCCCAGGCTTTCACGGCTTTAACCTCAG...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCGATGGGCCAAAAAGGTaGACCAGTCCAAACATGGCA +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEADGPKR*TSPNMA
Trigger: TGCCATGTTTGGACTGGTTCACCTTTTTGGCCCATC...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGAGGCATGACTGTTGCTaGATGAGCCCAAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVRHDCC*MSPSDG
Trigger: CCCATCACTTGGGCTCATTCAGCAACAGTCATGCCT...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTTGTTGTTCTAGAACTTaGCCATCCTTCTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCCCSRT*PSFFLN
Trigger: ATTCAGAAAGAAGGATGGTCAAGTTCTAGAACAACA...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGCCAACAGCAAATCTCTaGTCCTTGGCAAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQPTANL*SLAKWL
Trigger: CAGCCATTTTGCCAAGGATCAGAGATTTGCTGTTGG...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTCCAACAGCAAATCTCTaGTCCTTGGCAAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: NETQRSQCKGTPLVKLATPTANL*SLAKWL
Trigger: CAGCCATTTTGCCAAGGATCAGAGATTTGCTGTTGG...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGCCTCTGCTTCCTCATTaGGGTCCTCCATGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEPLLPH*GPPCLC
Trigger: GCACAGGCATGGAGGACCTCAATGAGGAAGCAGAGG...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR GCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCAGCTTTTGGCTGGATaGTGCCTCCAGCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAQLLAG*CLQLFF
Trigger: AAAGAACAGCTGGAGGCAGCATCCAGCCAAAAGCTG...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGTCATGCGGAAGGCCGTaGGGAAACGCTCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKSCGRP*GNALYC
Trigger: ACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGA...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GGGGCCTGTCTCAGAATAGTTGCAGATGATGGTTTTCAAATCGGAATACCTGTTAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GACLRIVADDGFQIGIPVKRRLS*GRPCGN
Trigger: GTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTT...AACAGGTATTCCGATTTGAAAACCATCATCTGCAACTATTCTGAGACAGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR GCA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCTTTCTAGATCTGAAATaGATTGCATCAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSFLDLK*IASSKH
Trigger: ATGCTTGCTTGATGCAATGCATTTCAGATCTAGAAA...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGACTGCTGGGGAGCCCTaGCAAATTCTGGCCGATTTA +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVTAGEP*QILADL
Trigger: TAAATCGGCCAGAATTTGGCAGGGCTCCCCAGCAGT...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATACTGCTGGGGAGCCCTaGCAAATTCTGGCCGATTTA +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENTAGEP*QILADL
Trigger: TAAATCGGCCAGAATTTGGCAGGGCTCCCCAGCAGT...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGACACTTGTGGATGATCTaGAGCCACACCAAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGHLWMI*SHTKPR
Trigger: TCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTG...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAAGACTCACCTGTTTCTaGAGAATTTCAGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQRLTCF*RISELR
Trigger: TCTGAGCTCTGAAATTCTGCAGAAACAGGTGAGTCT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCGGCTGCCCCAAATCTTaGAACTTGGCCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIGCPKS*NLATTW
Trigger: CCAGGTGGTGGCCAAGTTGCAAGATTTGGGGCAGCC...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACCCTTGGCAAAATGGCTaGCCCAAATCTTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNPWQNG*PKSCNL
Trigger: CAAGTTGCAAGATTTGGGGCAGCCATTTTGCCAAGG...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTGGCACCAGAATTCTATaGCATAAAAAGGGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRGTRIL*HKKGLK
Trigger: TTTTAACCCCTTTTTATGGCATAGAATTCTGGTGCC...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGTTGTTTCTCTTGACTaGGCGGCTCAGCGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGVVSLD*AAQRGL
Trigger: AAGACCCCGCTGAGCCGCCCAGTCAAGAGAAACAAC...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR CCA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCGGCTTCGCAGGGAGGTaGCCAGAACATTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSGFAGR*PEHCLG
Trigger: ACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCC...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGTTGTGCATCCACCTCTaGGACGTCTTTCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKLCIHL*DVFLNQ
Trigger: CTGGTTGAGAAAGACGTCCCAGAGGTGGATGCACAA...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGTTCCTGGGAGATTGCTaGGATGGGAAGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKFLGDC*DGKVNA
Trigger: AGCATTCACCTTCCCATCCCAGCAATCTCCCAGGAA...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTTTCCCCATCATGCTTTaGTCTTCGATTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSFPIML*SSISDV
Trigger: CACATCAGAAATCGAAGACCAAAGCATGATGGGGAA...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTGAACCTTTCCAGAACTaGGTCCCCCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGEPFQN*VPLGAG
Trigger: ACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTC...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGCTCTCCAGCTCCTCGTaGTTGACCGACATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWLSSSS*LTDIRD
Trigger: GTCCCTGATGTCGGTCAACCACGAGGAGCTGGAGAG...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTTTTAAATGGGCTTATTaGAAGGGGTCCATACTGAAT +
Preference number: 4 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRFKWAY*KGSILN
Trigger: ATTCAGTATGGACCCCTTCCAATAAGCCCATTTAAA...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CTCTCCAGCTCCTCGTGGTTGACCGACATCAGGGACAGAGGTGTGTCACTGTCTTTTAAATGGGCTTATTaGAAGGGGTCCATACTGAAT +
Preference number: 4 (lower is better)
Translates to: LSSSSWLTDIRDRGVSLSFKWAY*KGSILN
Trigger: ATTCAGTATGGACCCCTTCCAATAAGCCCATTTAAA...AGACAGTGACACACCTCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATCACAATGTCTGCCCTTaGCCTGGGACTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENHNVCP*PGTLGF
Trigger: AAAGCCCAAAGTCCCAGGCCAAGGGCAGACATTGTG...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCAGCCATATTGAAGGAGTaGGGAAAAGGCCCAAATAAC +
Preference number: 4 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAAILKE*GKGPNN
Trigger: GTTATTTGGGCCTTTTCCCCACTCCTTCAATATGGC...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCGGGGTGGGAGAATCCTaGGGTGTGTTTGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIGVGES*GVFGST
Trigger: AGTGCTGCCAAACACACCCCAGGATTCTCCCACCCC...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAGTACTATATGTCCAATaGAATTGCCACAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQVLYVQ*NCHNSA
Trigger: GGCTGAGTTGTGGCAATTCCATTGGACATATAGTAC...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGGAACCAGTCCAAACATaGCAGGACCAAGAAGGAACA +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQEPVQT*QDQEGT
Trigger: TGTTCCTTCTTGGTCCTGCCATGTTTGGACTGGTTC...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATCAAATCTCTGATCCTTaGCAAAATGGCTGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDQISDP*QNGCPK
Trigger: TTTGGGGCAGCCATTTTGCCAAGGATCAGAGATTTG...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGGTTGATTTTTCAGGATaGCACAGAGCCGACTTCACC +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQVDFSG*HRADFT
Trigger: GGTGAAGTCGGCTCTGTGCCATCCTGAAAAATCAAC...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTaGGTAAAACTGGCCACTTTGGGTCATATAGATCCC +
Preference number: 4 (lower is better)
Translates to: NETQRSQCKGTP*VKLATLGHIDP
Trigger: GGGATCTATATGACCCAAAGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATGAAATGAAGAAAGGATaGGTGTCAGGAAACCGATGT +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDEMKKG*VSGNRC
Trigger: ACATCGGTTTCCTGACACTCATCCTTTCTTCATTTC...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCGCTGGGATGGGAAGGTaGATGCTGACCCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIAGMGR*MLTLSE
Trigger: CTCAGAAAGGGTCAGCATTCACCTTCCCATCCCAGC...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGATTGGGTAATACTCCGTaGCCTGCACCTGCAACCGTT +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGLGNTP*PAPATV
Trigger: AACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAA...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGTGTCCTGGGAGATGCTaGAGCCACTTGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKECPGRC*SHLETS
Trigger: AGAGGTCTCCAAGTGGCTTCAGCATCTCCCAGGACA...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGGCACACGCATGCATTTaGTGCAGCCATTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWAHACI*CSHWCP
Trigger: GGGACACCAATGGCTGCATCAAATGCATGCGTGTGC...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGCAGACCTGACTTTTaGGTCCTGGTTCTCTATGGG +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGGRPDF*VLVLYG
Trigger: CCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCC...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTGAGAGTGGGCAGACCTaGCTTTTGAGTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGESGQT*LLSPGS
Trigger: AGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTC...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAGTAACTGTTGACATGTaGGTTGAAAGGAACCTATCT +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQVTVDM*VERNLS
Trigger: AGATAGGTTCCTTTCAACTCACATGTCAACAGTTAC...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATGTGGGGCTTCATGTCTaGTGCATTGAGCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENVGLHV*CIEHSG
Trigger: ACCAGAATGCTCAATGCATCAGACATGAAGCCCCAC...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATGGTGATCATCTCAAGTaGAAGATTCCAGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDGDHLK*KIPGRS
Trigger: TGATCTTCCTGGAATCTTTCACTTGAGATGATCACC...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGGCCTTCAAGGACAAGTaGGGACATGAAGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKAFKDK*GHEANS
Trigger: GGAATTTGCTTCATGTCCTCACTTGTCCTTGAAGGC...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGCAGGTCATCTCTGTATaGTTCCTCTTTTACACTGCC +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQQVISV*FLFYTA
Trigger: GGCAGTGTAAAAGAGGAATCATACAGAGATGACCTG...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGGCCACCATGCACAGTTaGCTTTCCTTGGGAAATCAT +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKATMHS*LSLGNH
Trigger: ATGATTTCCCAAGGAAAGTCAACTGTGCATGGTGGC...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATCAAGCTGTGTTCAAATaGGACCCAGAGATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENQAVFK*DPEIPV
Trigger: CACTGGGATCTCTGGGTCTCATTTGAACACAGCTTG...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGGACCATCCTTCTTTCTaGATATCTCTTAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLDHPSF*ISLRSF
Trigger: AAAGCTCCTAAGAGATATTCAGAAAGAAGGATGGTC...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGACTTCTTACAATGTGTaGCCTTTGACAAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLTSYNV*PLTRSC
Trigger: ACAAGACCTTGTCAAAGGTCACACATTGTAAGAAGT...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAGAACTCATGGGTCTGTaGTCATTTTACTGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQELMGL*SFYCKA
Trigger: AGCTTTACAGTAAAATGATCACAGACCCATGAGTTC...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGACCACCACAGGGCATCTaGATAGGTCTCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRPPQGI*IGLKLL
Trigger: GAGGAGTTTGAGACCTATGCAGATGCCCTGTGGTGG...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEKRRLS*GRPCGN
Trigger: GTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGTCCGTGACCTGCACCTaGAACCGTTCCATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWSVTCT*NRSMCC
Trigger: GCAACACATGGAACGGTTGCAGGTGCAGGTCACGGA...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTTCCGTGACCTGCACCTaGAACCGTTCCATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVSVTCT*NRSMCC
Trigger: GCAACACATGGAACGGTTGCAGGTGCAGGTCACGGA...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGGTCCTCCTTCTTCTCTaGTTCAGCTGGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWVLLLL*FSWRGG
Trigger: ACCTCCTCGCCAGCTGAAGCAGAGAAGAAGGAGGAC...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGACTGAACTCAGCTCCTaGCCAGAGGGGCACTTCACT +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKETELSS*PEGHFT
Trigger: AGTGAAGTGCCCCTCTGGGCAGGAGCTGAGTTCAGT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGTTTCTAGATCTGAAATaGATTGCATCAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLFLDLK*IASSKH
Trigger: ATGCTTGCTTGATGCAATGCATTTCAGATCTAGAAA...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR GCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAAAGTTGAGTCCTGTCTaGTTCTTTGTAGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQKLSPV*FFVAFG
Trigger: ACCAAAAGCTACAAAGAAGCAGACAGGACTCAACTT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGTTGTGCATCCACCTCTaGGACGTCTTTCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVLCIHL*DVFLNQ
Trigger: CTGGTTGAGAAAGACGTCCCAGAGGTGGATGCACAA...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGGACCCAGCTTTTGGCTaGATGCTGCCTCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGDPAFG*MLPPAV
Trigger: AACAGCTGGAGGCAGCATCCAGCCAAAAGCTGGGTC...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAAAGGACTTTCTTCTATaGCATCTACATTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKKDFLL*HLHSEG
Trigger: CCCCTCTGAATGTAGATGCCATAGAAGAAAGTCCTT...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCGGATCATGTCTTCGATaGGGAAGTCATTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAGSCLR*GSHSHS
Trigger: GCTATGGGAATGACTTCCCCATCGAAGACATGATCC...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGATGGCGGCCTTCAGGGTaGGGATCATGTCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRWRPSG*GSCLRW
Trigger: CCATCGAAGACATGATCCCCACCCTGAAGGCCGCCA...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCATGGCGGCCTTCAGGGTaGGGATCATGTCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSWRPSG*GSCLRW
Trigger: CCATCGAAGACATGATCCCCACCCTGAAGGCCGCCA...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAAGACTTCTTGTGTTTTaGCGTGGAGGGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGRLLVF*RGGRSR
Trigger: CCTGGACCTCCCTCCACGCCAAAACACAAGAAGTCT...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTAAATCCCATCCCCTGTaGACGACAGAGGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVKSHPL*TTEAWS
Trigger: GCTCCATGCCTCTGTCGTCCACAGGGGATGGGATTT...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTGTCTGCCCTTGGCCTaGGACTTTGGGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGCLPLA*DFGLWF
Trigger: GAACCAAAGCCCAAAGTCCCAGGCCAAGGGCAGACA...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATGTCCTGAACCTGTCTTTCAACTTTTACAAACTTCCCCATCATGCTTTGGTCTGTCTGCCCTTGGCCTaGGACTTTGGGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: HVLNLSFNFYKLPHHALVCLPLA*DFGLWF
Trigger: GAACCAAAGCCCAAAGTCCCAGGCCAAGGGCAGACA...GACCAAAGCATGATGGGGAAGTTTGTAAAAGTTGAAAGACAGGTTCAGGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTCACAATGTCTGCCCTTaGCCTGGGACTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGHNVCP*PGTLGF
Trigger: AAAGCCCAAAGTCCCAGGCCAAGGGCAGACATTGTG...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTTGCCAGCATGTCAAATaGAAGCCCGTGGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGCQHVK*KPVGLH
Trigger: ATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCA...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGTGTTTAGGGGCCAGTTaGCTCAGTTTGGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQCLGAS*LSLEWF
Trigger: AAACCATTCCAAACTGAGCCAACTGGCCCCTAAACA...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGATAACATCTCCCTCATaGGGTTGCGATGAGGATTGC +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKITSPS*GCDEDC
Trigger: GCAATCCTCATCGCAACCCCATGAGGGAGATGTTAT...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAAACAAGGGGCACTTGTaGATGATCTGCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGNKGHL*MICSHT
Trigger: GGTGTGGCTGCAGATCATCCACAAGTGCCCCTTGTT...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTAACAAGGGGCACTTGTaGATGATCTGCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGNKGHL*MICSHT
Trigger: GGTGTGGCTGCAGATCATCCACAAGTGCCCCTTGTT...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAACTTGGCCACCACCTaGACTCTTAACCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWNLATT*TLNPQG
Trigger: CCCCTGAGGGTTAAGAGTCCAGGTGGTGGCCAAGTT...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAAGGAAAAGAGACGACTaGTTCATAAAATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQRKRDD*FIKSPC
Trigger: ACATGGAGATTTTATGAATCAGTCGTCTCTTTTCCT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAGGAAAAGAGACGACTaGTTCATAAAATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSRKRDD*FIKSPC
Trigger: ACATGGAGATTTTATGAATCAGTCGTCTCTTTTCCT...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGATATCTATTCTCGTCTaGAGGTACTTTATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMISILV*RYFILE
Trigger: TTCCAGGATAAAGTACCTTCAGACGAGAATAGATAT...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATTTGGTCTTCGATTTCTaGTGTGGATGGTCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENLVFDF*CGWSGY
Trigger: GTAGCCAGACCATCCACATCAGAAATCGAAGACCAA...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGCAGAATAGTTGCAGATaGTGGTTTTCAAATCGGAAT +
Preference number: 4 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMQNSCR*WFSNRN
Trigger: ATTCCGATTTGAAAACCATCATCTGCAACTATTCTG...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGCAGAATAGTTGCAGATaGTGGTTTTCAAATCGGAAT +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKQNSCR*WFSNRN
Trigger: ATTCCGATTTGAAAACCATCATCTGCAACTATTCTG...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCGGAGGGGTCAGCCAGTaGCCTCTTTTAAATGGGCTT +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIGGVSQ*PLLNGL
Trigger: AAGCCCATTTAAAAGAGGTCACTGGCTGACCCCTCC...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGCTCTTGACAAGACTGTaGGGGAGAATAGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVLLTRL*GRIAVS
Trigger: TGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAG...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGGGCCTGTCTCAGAATAGTTGCAGATGATGGTTTTCAAATCGGAATACCTGTTAGCTACTGTGGCTCTTaGCAAGACTGTGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GACLRIVADDGFQIGIPVSYCGS*QDCEGE
Trigger: TTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCT...AACAGGTATTCCGATTTGAAAACCATCATCTGCAACTATTCTGAGACAGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTGGTGATCATCTCAAGTaGAAGATTCCAGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: NETQRSQCKGTPLVKLATGDHLK*KIPGRS
Trigger: TGATCTTCCTGGAATCTTTCACTTGAGATGATCACC...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATAGATTCCTAGCATTTTaGTGGCAGAAACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDRFLAF*WQKLWF
Trigger: AAACCACAGTTTCTGCCATCAAAATGCTAGGAATCT...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCGGACAAGTGAGGACATaGAGCAAATTCCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAGQVRT*SKFLRM
Trigger: CATCCTTAGGAATTTGCTTCATGTCCTCACTTGTCC...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCATGAAGATGTTCATTTaGGCCAACAGAGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCMKMFI*ANRGLF
Trigger: AAACAGGCCTCTGTTGGCTCAAATGAACATCTTCAT...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTCTGACTCAGGAGAACTaGAACATCCTACCACAGGGA +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGLTQEN*NILPQG
Trigger: TCCCTGTGGTAGGATGTTTCAGTTCTCCTGAGTCAG...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTAGCCCGGACCCCAGGATaGCCGCTGGAAGGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SFSCSGLNRDALISLGILARTPG*PLEGQK
Trigger: TTTTTGCCCTTCCAGCGGGCATCCTGGGGTCCGGGC...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGAACCGTTCCATGTGTTaGATGTGCATATCCACGAGG +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVNRSMC*MCISTR
Trigger: CCTCGTGGATATGCACATGCAACACATGGAACGGTT...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGATAACTCATCAGAAATaGTACACTTGGGATTACCAC +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKITHQK*YTWDYH
Trigger: GTGGTAATCCCAAGTGTAGCATTTCTGATGAGTTAT...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGTGTACAGTAGGGCAGTaGTTCCCAGGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWCTVGQ*FPGCLL
Trigger: AAGCAGACAGCCTGGGAAGCACTGCCCTACTGTACA...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGAGAACTCCATTGAGTTaGTGGAAAATGCATCATCTA +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKRTPLS*WKMHHL
Trigger: TAGATGATGCATTTTCCAGCAACTCAATGGAGTTCT...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGCAGACCCTGAATTTCTaGTTGCTCACTGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVQTLNF*LLTVSH
Trigger: ATGGCTCACAGTGAGCAAGCAGAAATTCAGGGTCTG...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAACCCAGAGATCCCAGTaGAAAGGGACACCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRTQRSQ*KGTPLV
Trigger: TACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGT...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGGGCACCAGAATTCTATaGCATAAAAAGGGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMGTRIL*HKKGLK
Trigger: TTTTAACCCCTTTTTATGGCATAGAATTCTGGTGCC...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGCCTTCCCACGTTTTaGGTGTCTTGTCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEGLPTF*VSCLHS
Trigger: GCTATGGAGACAAGACACCCAAAACGTGGGAAGGCC...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGAAGGACTTTCTTCTATaGCATCTACATTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQKDFLL*HLHSEG
Trigger: CCCCTCTGAATGTAGATGCCATAGAAGAAAGTCCTT...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATGGATCATGTCTTCGATaGGGAAGTCATTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENGSCLR*GSHSHS
Trigger: GCTATGGGAATGACTTCCCCATCGAAGACATGATCC...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGCTGATGTGGATGGTCTaGCTACATATGGTTCATTCC +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKLMWMV*LHMVHS
Trigger: GGAATGAACCATATGTAGCCAGACCATCCACATCAG...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAGGAGGTGCCCTTGGTTaGGTAATACTCCGTGACCTG +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSGGALG*VILRDL
Trigger: CAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGAAAACAGTTAATTGCTaGAGCGTTTTACACAAGAGG +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLKTVNC*SVLHKR
Trigger: CCTCTTGTGTAAAACGCTCCAGCAATTAACTGTTTT...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTGATGCATTATATAAATaGAAGAATGGTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSDALYK*KNGVVR
Trigger: CCTCACCACACCATTCTTCCATTTATATAATGCATC...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGGGCCTGTCTCAGAATAGTTGCAGATGATGGTTTTCAAATCGGAATACCTGTTAAATCCCCCTCCTGCTaGATAAACTGGGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GACLRIVADDGFQIGIPVKSPSC*INWVLS
Trigger: GGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTT...AACAGGTATTCCGATTTGAAAACCATCATCTGCAACTATTCTGAGACAGGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGCACAATGTCTGCCCTTaGCCTGGGACTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEHNVCP*PGTLGF
Trigger: AAAGCCCAAAGTCCCAGGCCAAGGGCAGACATTGTG...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAGTTAACCAGTTCCATTaGATTATCATGCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKVNQFH*IIMLFP
Trigger: AGGGAACAGCATGATAATCCAATGGAACTGGTTAAC...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATACGATTGCAATTTCTTaGGCAAGTTTCAGAACGACT +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDTIAIS*ASFRTT
Trigger: AGTCGTTCTGAAACTTGCCCAAGAAATTGCAATCGT...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAACCAGTTGGCTCAGTTTaGAATGGTTTAATATCAGCA +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKPVGSV*NGLISA
Trigger: TGCTGATATTAAACCATTCCAAACTGAGCCAACTGG...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGTATGTCCTGACAACATaGGGATTCTCTGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVYVLTT*GFSGTR
Trigger: CCTTGTCCCAGAGAATCCCCATGTTGTCAGGACATA...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGGTTGATTTTTCAGGATaGCACAGAGCCGACTTCACC +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVVDFSG*HRADFT
Trigger: GGTGAAGTCGGCTCTGTGCCATCCTGAAAAATCAAC...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp TGCCTGCTGGCTTGTTTAGGGGCCAGTTGGCTCAGTTaGGAATGGTTTAATATCAGCAACAATAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: CLLACLGASWLS*EWFNISNNSIG
Trigger: CCCAATGCTATTGTTGCTGATATTAAACCATTCCAAACTGAGCCAACTGGCCCCTAAACAAGCCAGCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp GGGGGAGAGAGAATGAGCTTTCCAGGTACACGGGCTTaGGTTGAATATGCAGCTCTACTTCTTACAATGTGT +
Preference number: 4 (lower is better)
Translates to: GGERMSFPGTRA*VEYAALLLTMC
Trigger: ACACATTGTAAGAAGTAGAGCTGCATATTCAACCAAAGCCCGTGTACCTGGAAAGCTCATTCTCTCTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTCAGTCTCATACTCCTTaGATGTGGTCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVQSHTP*MWSGQP
Trigger: TGGCTGTCCTGACCACATTCAAGGAGTATGAGACTG...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATGTCCTGAACCTGTCTTTCAACTTTTACAAACTTCCCCATCATGCTTTGGTCCAGTCTCATACTCCTTaGATGTGGTCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: HVLNLSFNFYKLPHHALVQSHTP*MWSGQP
Trigger: TGGCTGTCCTGACCACATTCAAGGAGTATGAGACTG...GACCAAAGCATGATGGGGAAGTTTGTAAAAGTTGAAAGACAGGTTCAGGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp CACATAATCATCTCTGTCCTGGGAGATGCTGAAGCCACTTGGAGACCTCTCCAGATATCTATTCTCGTCTaGAGGTACTTTATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HIIISVLGDAEATWRPLQISILV*RYFILE
Trigger: TTCCAGGATAAAGTACCTTCAGACGAGAATAGATAT...CTGGAGAGGTCTCCAAGTGGCTTCAGCATCTCCCAGGACAGAGATGATTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCTTCTTCCCCATGTCCTaGACCTGTCTTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAFFPMS*TCLSTF
Trigger: AAAAGTTGAAAGACAGGTTCAGGACATGGGGAAGAA...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAAAAACCCATAGGGGCTaGCTTTGTCAATGGTCACCT +
Preference number: 4 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRKTHRG*LCQWSP
Trigger: AGGTGACCATTGACAAAGTCAGCCCCTATGGGTTTT...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGTGGATGTTAGGCAGGTaGTCATCTCAAGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKWMLGR*SSQVKD
Trigger: ATCTTTCACTTGAGATGATCACCTGCCTAACATCCA...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGTGCTGTTCCCTTGTCTaGCAAAAGGATCTTTGTGAA +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKCCSLV*QKDLCE
Trigger: TTCACAAAGATCCTTTTGTCAGACAAGGGAACAGCA...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCTGGTTTTCTTATCTCTaGACTTCCAGTGCACTGCAA +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAWFSYL*TSSALQ
Trigger: TTGCAGTGCACTGGAAGTTCAGAGATAAGAAAACCA...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAGCTTTGTGTGTACATTaGTTGTCTCACTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKALCVH*LSHLKI
Trigger: GATTTTCAAGTGAGACAATCAATGTACACACAAAGC...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCACCACAACTCAGCCACTaGGATCCAACATTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSPQLSH*DPTFLP
Trigger: AGGCAGGAATGTTGGATCTCAGTGGCTGAGTTGTGG...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGACTGAGGTTAAAGCCGTaGAAGCCTGGGAACAAATCT +
Preference number: 4 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRLRLKP*KPGNKS
Trigger: AGATTTGTTCCCAGGCTTTCACGGCTTTAACCTCAG...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATAAAGATCAGAAGACCTaGGTTCCAGATTTATTCTGT +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDKDQKT*VPDLFC
Trigger: ACAGAATAAATCTGGAACTCAGGTCTTCTGATCTTT...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTGATGGGCCAAAAAGGTaGACCAGTCCAAACATGGCA +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVDGPKR*TSPNMA
Trigger: TGCCATGTTTGGACTGGTTCACCTTTTTGGCCCATC...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCATGACTGTTGCTGAATaGGCCCAAGTGATGGGCCAA +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIMTVAE*AQVMGQ
Trigger: TTGGCCCATCACTTGGGCTCATTCAGCAACAGTCAT...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGATGCAACCTAAGGCATaGCTGTTGCTGAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGMQPKA*LLLNEP
Trigger: GGGCTCATTCAGCAACAGTCATGCCTTAGGTTGCAT...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGTATCTGCTTATGTCCTaGCAACATGGGGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVYLLMS*QHGDSL
Trigger: CAGAGAATCCCCATGTTGTCAGGACATAAGCAGATA...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGTACATTCCTGAGCACTaGGCTGGGCTTTTGACTACC +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEYIPEH*AGLLTT
Trigger: GGTAGTCAAAAGCCCAGCTCAGTGCTCAGGAATGTA...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTAAGGGGCACTTGTGGATaGTCTGCAGCCACACCAAGC +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLRGTCG*SAATPS
Trigger: GCTTGGTGTGGCTGCAGATCATCCACAAGTGCCCCT...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGCAGCTTTTGGCTGGATaGTGCCTCCAGCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEQLLAG*CLQLFF
Trigger: AAAGAACAGCTGGAGGCAGCATCCAGCCAAAAGCTG...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR GCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACTGTGTGTTTTCTCCCTaGCAATTCATAACTCATCAG +
Preference number: 4 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNCVFSP*QFITHQ
Trigger: CTGATGAGTTATGAATTGGCAGGGAGAAAACACACA...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTAGAGGGGAGGAGTGCCTaGATGGCCATGGGATTGTTC +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLEGRSA*MAMGLF
Trigger: GAACAATCCCATGGCCATGCAGGCACTCCTCCCCTC...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGTTGTGCATCCACCTCTaGGACGTCTTTCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWLCIHL*DVFLNQ
Trigger: CTGGTTGAGAAAGACGTCCCAGAGGTGGATGCACAA...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTGGCCTTCCCACGTTTTaGGTGTCTTGTCTCCATAGC +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGGLPTF*VSCLHS
Trigger: GCTATGGAGACAAGACACCCAAAACGTGGGAAGGCC...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGACAATTAAGGAAAAGGTaGCGGCAATCAGACGGCCTT +
Preference number: 4 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRQLRKR*RQSDGL
Trigger: AAGGCCGTCTGATTGCCGCCACCTTTTCCTTAATTG...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATGAAGGTACTTTATCCTaGAAAGCATGTCGAGATGCC +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENEGTLS*KACRDA
Trigger: GGCATCTCGACATGCTTTCCAGGATAAAGTACCTTC...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATAACAGACAAATAGCATaGCTCATCAGTAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDNRQIA*LISNFS
Trigger: GGAGAAATTACTGATGAGCCATGCTATTTGTCTGTT...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGAAATCCCCCTCCTGCTaGATAAACTGGGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEKSPSC*INWVLS
Trigger: GGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGTCAAATGGAAGCCCGTaGGGCTTCATGTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKESNGSP*GFMSDA
Trigger: TGCATCAGACATGAAGCCCCACGGGCTTCCATTTGA...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGCCCATTTCAGTAGCATaGAATTATGAGGATGATTTT +
Preference number: 4 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKPISVA*NYEDDF
Trigger: AAAATCATCCTCATAATTCCATGCTACTGAAATGGG...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATGTTCTGGGCATATATTaGTGCTTAATAAACCCTGTT +
Preference number: 4 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDVLGIY*CLINPV
Trigger: AACAGGGTTTATTAAGCACCAATATATGCCCAGAAC...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGATTCCTAAGGATGCCTaGGGTTCAGGAAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVIPKDA*GSGSKE
Trigger: TTCTTTGCTTCCTGAACCCCAGGCATCCTTAGGAAT...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGTGGCTCAGTTTGGAATaGTTTAATATCAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: QGEWADLTFESWFSMGQLWLSLE*FNISNN
Trigger: ATTGTTGCTGATATTAAACCATTCCAAACTGAGCCA...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCTGCACCCAGCAGCAGTaGTTTTTGCTAGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMICTQQQ*FLLGLL
Trigger: CAAAAGGCCTAGCAAAAACCACTGCTGCTGGGTGCA...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCGTGCCTGCATGGCCATaGGATTGTTCTTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSVPAWP*DCSSFP
Trigger: AGGGAATGAAGAACAATCCCATGGCCATGCAGGCAC...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTGAACCAGTCCAAACATaGCAGGACCAAGAAGGAACA +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGEPVQT*QDQEGT
Trigger: TGTTCCTTCTTGGTCCTGCCATGTTTGGACTGGTTC...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAAACATGGGGATTCTCTaGGACAAGGCAAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRNMGIL*DKARGP
Trigger: GGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTT...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp TCAAATGGAAGCCCGTGGGGCTTCATGTCTGATGCATaGAGCATTCTGGTATATTTCCCATCTCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: SNGSPWGFMSDA*SILVYFPSQTS
Trigger: TGAAGTCTGAGATGGGAAATATACCAGAATGCTCAATGCATCAGACATGAAGCCCCACGGGCTTCCATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
3UTR CAA 72 bp TTGCACAGCTTCTCTGGAGCTATGAAGTTCAAAGCATaGAATCCAAACTCGAAGTCCCCATTCAACCCACTC +
Preference number: 4 (lower is better)
Translates to: LHSFSGAMKFKA*NPNSKSPFNPL
Trigger: GAGTGGGTTGAATGGGGACTTCGAGTTTGGATTCAATGCTTTGAACTTCATAGCTCCAGAGAAGCTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp TTTCTTCTGCAAGTTCCCCCATTCATTGCTAGGGTGTaGTCTGATAGCCACCATGCACAGTTGACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FLLQVPPFIARV*SDSHHAQLTFL
Trigger: AAGGAAAGTCAACTGTGCATGGTGGCTATCAGACAACACCCTAGCAATGAATGGGGGAACTTGCAGAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGACAGTCTCATACTCCTTaGATGTGGTCAGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRQSHTP*MWSGQP
Trigger: TGGCTGTCCTGACCACATTCAAGGAGTATGAGACTG...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCAGGAAAAGAGACGACTaGTTCATAAAATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCRKRDD*FIKSPC
Trigger: ACATGGAGATTTTATGAATCAGTCGTCTCTTTTCCT...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGTTGGTCTTCGATTTCTaGTGTGGATGGTCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWLVFDF*CGWSGY
Trigger: GTAGCCAGACCATCCACATCAGAAATCGAAGACCAA...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAAAAGGAACCTATCTCTaGGGAAGTGATTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGKGTYL*GSDSSL
Trigger: GAGAGAGGAATCACTTCCTCAGAGATAGGTTCCTTT...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGGGTGATCATCTCAAGTaGAAGATTCCAGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVGDHLK*KIPGRS
Trigger: TGATCTTCCTGGAATCTTTCACTTGAGATGATCACC...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATTGGATGTTAGGCAGGTaGTCATCTCAAGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENWMLGR*SSQVKD
Trigger: ATCTTTCACTTGAGATGATCACCTGCCTAACATCCA...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCATATGTGGAGAGTATaGCTCACTCTCCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAHMWRV*LTLLYC
Trigger: ACAATAAAGGAGAGTGAGTCATACTCTCCACATATG...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGACAGGTCATCTCTGTATaGTTCCTCTTTTACACTGCC +
Preference number: 4 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRQVISV*FLFYTA
Trigger: GGCAGTGTAAAAGAGGAATCATACAGAGATGACCTG...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGATACATTCCTGAGCACTaGGCTGGGCTTTTGACTACC +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRYIPEH*AGLLTT
Trigger: GGTAGTCAAAAGCCCAGCTCAGTGCTCAGGAATGTA...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTGCCCGGCAGAATACTaGTCAATCACATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGCPAEY*SITSFT
Trigger: TGTGAAGGATGTGATTGAGCAGTATTCTGCCGGGCA...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAGAAAGCATGTCGAGATaGCCGGCAGAATACTGCTCA +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSESMSR*PAEYCS
Trigger: TGAGCAGTATTCTGCCGGGCATCTCGACATGCTTTC...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTCCAGAGGATGGCTTGTaGTTAATATCACACCTGTAC +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGPEDGL*LISHLY
Trigger: GTACAGGTGTGATATTAAGCACAAGCCATCCTCTGG...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCAGACCCTGAATTTCTaGTTGCTCACTGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGQTLNF*LLTVSH
Trigger: ATGGCTCACAGTGAGCAAGCAGAAATTCAGGGTCTG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGCAATTAAGGAAAAGGTaGCGGCAATCAGACGGCCTT +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEQLRKR*RQSDGL
Trigger: AAGGCCGTCTGATTGCCGCCACCTTTTCCTTAATTG...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCCAATTAAGGAAAAGGTaGCGGCAATCAGACGGCCTT +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIQLRKR*RQSDGL
Trigger: AAGGCCGTCTGATTGCCGCCACCTTTTCCTTAATTG...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCATATGGTTCATTCCTaGGAGATTGCTGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGHMVHS*EIAGMG
Trigger: TCCCATCCCAGCAATCTCCCAGGAATGAACCATATG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATCTTCGATTTCTGATGTaGATGGTCTGGCTACATATG +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENLRFLM*MVWLHM
Trigger: CATATGTAGCCAGACCATCCACATCAGAAATCGAAG...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATTTCCCCATCATGCTTTaGTCTTCGATTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENFPIML*SSISDV
Trigger: CACATCAGAAATCGAAGACCAAAGCATGATGGGGAA...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTAGGAGGTGCCCTTGGTTaGGTAATACTCCGTGACCTG +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLGGALG*VILRDL
Trigger: CAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAAAATCCCCCTCCTGCTaGATAAACTGGGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSKSPSC*INWVLS
Trigger: GGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTT...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACACTCCATTGAGTTGCTaGAAAATGCATCATCTATTG +
Preference number: 4 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNTPLSC*KMHHLL
Trigger: CAATAGATGATGCATTTTCCAGCAACTCAATGGAGT...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGACAATCTCTGCTGTCCTaGTCTTATGATCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRQSLLS*SYDPAG
Trigger: CCCTGCTGGATCATAAGACCAGGACAGCAGAGATTG...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTTATGTCCTGACAACATaGGGATTCTCTGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVYVLTT*GFSGTR
Trigger: CCTTGTCCCAGAGAATCCCCATGTTGTCAGGACATA...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCTTCTTCTATGGCATCTaGATGCTGCCTCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIFFYGI*MLPPAV
Trigger: AACAGCTGGAGGCAGCATCCAGATGCCATAGAAGAA...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
3UTR CAA 72 bp AGAATAACAACATCTCATAAGAGGCCAGAGGATGGCTaGTGCTTAATATCACACCTGTACAGTAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RITTSHKRPEDG*CLISHLYSRAV
Trigger: CACTGCCCTACTGTACAGGTGTGATATTAAGCACAAGCCATCCTCTGGCCTCTTATGAGATGTTGTTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGGGCCTGTCTCAGAATAGTTGCAGATGATGGTTTTCAAATCGGAATACCTGTTGAAATGAAGAAAGGATaGGTGTCAGGAAACCGATGT +
Preference number: 4 (lower is better)
Translates to: GACLRIVADDGFQIGIPVEMKKG*VSGNRC
Trigger: ACATCGGTTTCCTGACACTCATCCTTTCTTCATTTC...AACAGGTATTCCGATTTGAAAACCATCATCTGCAACTATTCTGAGACAGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCATGGGAAGGTGAATGCTaGCCCTTTCTGAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSWEGEC*PFLRLL
Trigger: AAGAAGTCTCAGAAAGGGTCAGCATTCACCTTCCCA...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTAGCTGGGATGGGAAGGTaGATGCTGACCCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SFSCSGLNRDALISLGILAGMGR*MLTLSE
Trigger: CTCAGAAAGGGTCAGCATTCACCTTCCCATCCCAGC...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTATTGGGTAATACTCCGTaGCCTGCACCTGCAACCGTT +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLLGNTP*PAPATV
Trigger: AACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAA...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGATGCTGTTCCCTTGTCTaGCAAAAGGATCTTTGTGAA +
Preference number: 4 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGCCSLV*QKDLCE
Trigger: TTCACAAAGATCCTTTTGTCAGACAAGGGAACAGCA...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCTTCATGGAGTTCTGCTaGAACGATTGCAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLFMEFC*NDCNFL
Trigger: CAAGAAATTGCAATCGTTTCAGCAGAACTCCATGAA...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAAGTAACACCAAAGACTaGGACAATGAAGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGSNTKD*DNEVHA
Trigger: TGCATGGACTTCATTGTCTCAGTCTTTGGTGTTACT...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGTTCTGGGCTCAATCGTaGTGCTTTGATTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEFWAQS*CFDFTW
Trigger: CCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAA...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAACTGAGCTGGGCTTTTaGCTACCTCATTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSTELGF*LPHCKP
Trigger: TGGCTTACAATGAGGTAGTCAAAAGCCCAGCTCAGT...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATCCTATCTTTCTAAGTTaGTTTTTCAGGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENPIFLS*FFRMAQ
Trigger: CTGTGCCATCCTGAAAAATCAACTTAGAAAGATAGG...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGACAAACTTCCCCATCATaGTTTGGTCTTCGATTTCTG +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGQTSPS*FGLRFL
Trigger: CAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTG...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCTCAAAAACAGTTAATTaGTGGAGCGTTTTACACAAG +
Preference number: 4 (lower is better)
Translates to: IATVALDKTVRENSSVSCSKTVN*WSVLHK
Trigger: CTTGTGTAAAACGCTCCAGCAATTAACTGTTTTTGA...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTAGCATTAGTGAGGGGCTaGCTGCTGGCTTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: SFSCSGLNRDALISLGILALVRG*LLACLG
Trigger: CCCTAAACAAGCCAGCAGGCAGCCCCTCACTAATGC...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGATTCCTCTTTTACACTaGCATTACTGGCTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQIPLLH*HYWLLK
Trigger: TTTTAGAAGCCAGTAATGGCAGTGTAAAAGAGGAAT...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAGAGATCCAACATTCCTaGCTCTCTTCATTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGEIQHS*LSSFQD
Trigger: ATCTTGGAATGAAGAGAGGCAGGAATGTTGGATCTC...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTGAGATCCAACATTCCTaGCTCTCTTCATTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGEIQHS*LSSFQD
Trigger: ATCTTGGAATGAAGAGAGGCAGGAATGTTGGATCTC...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAGGATCATGTCTTCGATaGGGAAGTCATTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSGSCLR*GSHSHS
Trigger: GCTATGGGAATGACTTCCCCATCGAAGACATGATCC...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCTGATGTGGATGGTCTaGCTACATATGGTTCATTCC +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGLMWMV*LHMVHS
Trigger: GGAATGAACCATATGTAGCCAGACCATCCACATCAG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTCTTCGATTTCTGATGTaGATGGTCTGGCTACATATG +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGLRFLM*MVWLHM
Trigger: CATATGTAGCCAGACCATCCACATCAGAAATCGAAG...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGGTGACCTCTTTTAAATaGGCTTATTGGAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGVTSFK*AYWKGS
Trigger: GGACCCCTTCCAATAAGCCCATTTAAAAGAGGTCAC...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCGATGCATTATATAAATaGAAGAATGGTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PNNPCPLSFRLPACQMEADALYK*KNGVVR
Trigger: CCTCACCACACCATTCTTCCATTTATATAATGCATC...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATAAAATTGGACGGTTCTaGAAATTTTGCCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: DNMGILWDKARGPKLCSNKIGRF*KFCLFT
Trigger: TGTAAACAGGCAAAATTTCCAGAACCGTCCAATTTT...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTATGCCAGCATGTCAAATaGAAGCCCGTGGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLCQHVK*KPVGLH
Trigger: ATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCA...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTCGACTAGTATATCTGTaGTCATGTCATCTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGRLVYL*SCHLGS
Trigger: TGACCCAAGATGACATGACCACAGATATACTAGTCG...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTTGGCTCAGTTTGGAATaGTTTAATATCAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: NETQRSQCKGTPLVKLATWLSLE*FNISNN
Trigger: ATTGTTGCTGATATTAAACCATTCCAAACTGAGCCA...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGATGGTGCAACATCTaGTACTATATGTCCAATGGA +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENRWCNI*YYMSNG
Trigger: TCCATTGGACATATAGTACCAGATGTTGCACCATCT...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGATCTCCAGGGAACTCATaGGTCTGTGATCATTTTACT +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGSPGNS*VCDHFT
Trigger: AGTAAAATGATCACAGACCCATGAGTTCCCTGGAGA...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp CTGACAAATCTGATGAAGTCCACCTATCTTTCTAAGTaGATTTTTCAGGATGGCACAGAGCCGACTTCACCT +
Preference number: 4 (lower is better)
Translates to: LTNLMKSTYLSK*IFQDGTEPTSP
Trigger: AGGTGAAGTCGGCTCTGTGCCATCCTGAAAAATCAACTTAGAAAGATAGGTGGACTTCATCAGATTTGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAGGGTGTAAGAGTAAGTaGACTATACAAAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRGCKSK*TIQSLS
Trigger: AGACAGACTTTGTATAGTTCACTTACTCTTACACCC...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGGGCCTGTCTCAGAATAGTTGCAGATGATGGTTTTCAAATCGGAATACCTGTTGTACTGGTCCAATCGTaGTTAAAAGTAAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: GACLRIVADDGFQIGIPVVLVQS*LKVRTA
Trigger: TGCTGTTCTTACTTTTAATCACGATTGGACCAGTAC...AACAGGTATTCCGATTTGAAAACCATCATCTGCAACTATTCTGAGACAGGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAAAAGGAACCTATCTCTaGGGAAGTGATTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRKGTYL*GSDSSL
Trigger: GAGAGAGGAATCACTTCCTCAGAGATAGGTTCCTTT...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGTAACTGTTGACATGTaGGTTGAAAGGAACCTATCT +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGVTVDM*VERNLS
Trigger: AGATAGGTTCCTTTCAACTCACATGTCAACAGTTAC...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAGTAACTCAGCTCCTTaGCTGGTATCAATCTTAGCA +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWSNSAP*LVSILA
Trigger: TGCTAAGATTGATACCAGTCAAGGAGCTGAGTTACT...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATGCTTTGTGTGTACATTaGTTGTCTCACTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: NQMSAIATVALDKTVRENALCVH*LSHLKI
Trigger: GATTTTCAAGTGAGACAATCAATGTACACACAAAGC...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTTTACAAATACATTCCTaGGCACTGAGCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVLQIHS*ALSWAF
Trigger: AAAAGCCCAGCTCAGTGCTCAGGAATGTATTTGTAA...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGACAATGTGTGACCTTTaGCAAGGTCTTGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKETMCDL*QGLVFS
Trigger: ACTGAAGACAAGACCTTGTCAAAGGTCACACATTGT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGATACACGGGCTTTGGTTaGATATGCAGCTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRYTGFG*ICSSTS
Trigger: AGAAGTAGAGCTGCATATTCAACCAAAGCCCGTGTA...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAATTATTTTCTGCCACTaGCAGCTGGATTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRIIFCH*QLDCEA
Trigger: GGCTTCACAATCCAGCTGTCAGTGGCAGAAAATAAT...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAGGTTCATTCCCTTTCTaGGACTTCTTGTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSGSFPF*DFLCFG
Trigger: GCCAAAACACAAGAAGTCTCAGAAAGGGAATGAACC...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519445.5
CDS-3UTR GCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCAAACTTCCCCATCATaGTTTGGTCTTCGATTTCTG +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGQTSPS*FGLRFL
Trigger: CAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGTCAAAAACAGTTAATTaGTGGAGCGTTTTACACAAG +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKSKTVN*WSVLHK
Trigger: CTTGTGTAAAACGCTCCAGCAATTAACTGTTTTTGA...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGAGATCTGAAATGCATTaGATCAAGCAAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: HANHAEKEALCCGDMGRKRSEMH*IKQACF
Trigger: AAAACATGCTTGCTTGATGCAATGCATTTCAGATCT...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTATGTACAGTAGGGCAGTaGTTCCCAGGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SFSCSGLNRDALISLGILCTVGQ*FPGCLL
Trigger: AAGCAGACAGCCTGGGAAGCACTGCCCTACTGTACA...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGAGAACTCCATTGAGTTaGTGGAAAATGCATCATCTA +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVRTPLS*WKMHHL
Trigger: TAGATGATGCATTTTCCAGCAACTCAATGGAGTTCT...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGTGGTGTGATGTTCTTTaGTCTGAGCTTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEWCDVL*SELLLL
Trigger: AAGAAGCAGAAGCTCAGAGCAAAGAACATCACACCA...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGAGACTCACCTGTTTCTaGAGAATTTCAGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKERLTCF*RISELR
Trigger: TCTGAGCTCTGAAATTCTGCAGAAACAGGTGAGTCT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTATGAGTTCTTTGCTGTaGGCACAGATGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTMSSLL*AQMAEP
Trigger: GGGCTCAGCCATCTGTGCCCACAGCAAAGAACTCAT...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGGATGCATTATATAAATaGAAGAATGGTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ETINQMSAIATVALDKTVDALYK*KNGVVR
Trigger: CCTCACCACACCATTCTTCCATTTATATAATGCATC...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTTGCCAGCATGTCAAATaGAAGCCCGTGGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTCQHVK*KPVGLH
Trigger: ATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCA...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAGCCATATTGAAGGAGTaGGGAAAAGGCCCAAATAAC +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRAILKE*GKGPNN
Trigger: GTTATTTGGGCCTTTTCCCCACTCCTTCAATATGGC...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTACAATCTCTGCTGTCCTaGTCTTATGATCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLQSLLS*SYDPAG
Trigger: CCCTGCTGGATCATAAGACCAGGACAGCAGAGATTG...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAGTTAACCAGTTCCATTaGATTATCATGCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRVNQFH*IIMLFP
Trigger: AGGGAACAGCATGATAATCCAATGGAACTGGTTAAC...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTATTCCTAAGGATGCCTaGGGTTCAGGAAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGIPKDA*GSGSKE
Trigger: TTCTTTGCTTCCTGAACCCCAGGCATCCTTAGGAAT...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGTTACACTGCCATTACTaGCTTCTAAAACCACTAAAG +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVLHCHY*LLKPLK
Trigger: CTTTAGTGGTTTTAGAAGCCAGTAATGGCAGTGTAA...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTAAAAGCCGTGAAAGCCTaGGAACAAATCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SFSCSGLNRDALISLGILKAVKA*EQISPG
Trigger: CCCTGGGGAGATTTGTTCCCAGGCTTTCACGGCTTT...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGATTTGTCTCTAACATCTaGAGCAAAGATCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGFVSNI*SKDQKT
Trigger: GGTCTTCTGATCTTTGCTCCAGATGTTAGAGACAAA...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTAAGACAGCAGGAATCTaGGAGAAGGAACATCATCGT +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGKTAGI*EKEHHR
Trigger: ACGATGATGTTCCTTCTCCCAGATTCCTGCTGTCTT...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGACTGTTCTGAGCTTTTaGCCTCCCACAGAATGTTTT +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWTVLSF*PPTECF
Trigger: AAAACATTCTGTGGGAGGCCAAAAGCTCAGAACAGT...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAATTACCAGATCAGGTTaGCTTCCATGGGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSITRSG*LPWETL
Trigger: CAAGGTTTCCCATGGAAGCCAACCTGATCTGGTAAT...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAGAAATGAAGAAAGGATaGGTGTCAGGAAACCGATGT +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIREMKKG*VSGNRC
Trigger: ACATCGGTTTCCTGACACTCATCCTTTCTTCATTTC...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAATATCTATTCTCGTCTaGAGGTACTTTATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGISILV*RYFILE
Trigger: TTCCAGGATAAAGTACCTTCAGACGAGAATAGATAT...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCTTCATGGAGTTCTGCTaGAACGATTGCAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSFMEFC*NDCNFL
Trigger: CAAGAAATTGCAATCGTTTCAGCAGAACTCCATGAA...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTTTTCATGTCACATTGTaGCCCAGAAAGACCAAATAC +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVFHVTL*PRKTKY
Trigger: GTATTTGGTCTTTCTGGGTCACAATGTGACATGAAA...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTTGGTTTTCTTATCTCTaGACTTCCAGTGCACTGCAA +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGWFSYL*TSSALQ
Trigger: TTGCAGTGCACTGGAAGTTCAGAGATAAGAAAACCA...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCAGATTCCTAGCATTTTaGTGGCAGAAACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIRFLAF*WQKLWF
Trigger: AAACCACAGTTTCTGCCATCAAAATGCTAGGAATCT...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGACCATCCTTCTTTCTaGATATCTCTTAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEDHPSF*ISLRSF
Trigger: AAAGCTCCTAAGAGATATTCAGAAAGAAGGATGGTC...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTACTTCTTACAATGTGTaGCCTTTGACAAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVTSYNV*PLTRSC
Trigger: ACAAGACCTTGTCAAAGGTCACACATTGTAAGAAGT...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTTCATGCGGAAGGCCGTaGGGAAACGCTCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTSCGRP*GNALYC
Trigger: ACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGA...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTATGCCCGGCAGAATACTaGTCAATCACATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLCPAEY*SITSFT
Trigger: TGTGAAGGATGTGATTGAGCAGTATTCTGCCGGGCA...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGTCAAAAACAGTTAATTaGTGGAGCGTTTTACACAAG +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVSKTVN*WSVLHK
Trigger: CTTGTGTAAAACGCTCCAGCAATTAACTGTTTTTGA...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTCTGTATAGAGTTGTTTaGAGGGATGAAATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: VLPRLSAYILACLTVTYGLYRVV*RDEIRY
Trigger: ATACCTGATTTCATCCCTGCAAACAACTCTATACAG...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGATTCCTCTTTTACACTaGCATTACTGGCTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVIPLLH*HYWLLK
Trigger: TTTTAGAAGCCAGTAATGGCAGTGTAAAAGAGGAAT...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCACATCATCCAGATGGTaGAACATCTGGTACTATATG +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMITSSRW*NIWYYM
Trigger: CATATAGTACCAGATGTTGCACCATCTGGATGATGT...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAAAGGACTTTCTTCTATaGCATCTACATTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSKDFLL*HLHSEG
Trigger: CCCCTCTGAATGTAGATGCCATAGAAGAAAGTCCTT...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTATTCCTGGGAGATTGCTaGGATGGGAAGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: SFSCSGLNRDALISLGILFLGDC*DGKVNA
Trigger: AGCATTCACCTTCCCATCCCAGCAATCTCCCAGGAA...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGATTTGCACAGCTTCTCTaGAGCTATGAAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRFAQLL*SYEVQS
Trigger: GCTTTGAACTTCATAGCTCCAGAGAAGCTGTGCAAA...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAGACAAGAAGAAAGCTaGTTTCTCCAACAATCTTCC +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWRQEES*FLQQSS
Trigger: GGAAGATTGTTGGAGAAACCAGCTTTCTTCTTGTCT...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAGACAGGTGGTTGTTCTaGGTGATCAAAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSDRWLF*VIKISS
Trigger: AGAAGAGATTTTGATCACCCAGAACAACCACCTGTC...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTGTGCCTGCATGGCCATaGGATTGTTCTTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTVPAWP*DCSSFP
Trigger: AGGGAATGAAGAACAATCCCATGGCCATGCAGGCAC...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGCAGAATAGTTGCAGATaGTGGTTTTCAAATCGGAAT +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWQNSCR*WFSNRN
Trigger: ATTCCGATTTGAAAACCATCATCTGCAACTATTCTG...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTGTACTGGTCCAATCGTaGTTAAAAGTAAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGVLVQS*LKVRTA
Trigger: TGCTGTTCTTACTTTTAATCACGATTGGACCAGTAC...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTTCATCTGGATTATCTTaGTTGTCACCATGGCAACTA +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGSSGLS*LSPWQL
Trigger: TAGTTGCCATGGTGACAATCAAGATAATCCAGATGA...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTGTAACATCTTTCTCTTaGAATAGGTGCTGTGTCATA +
Preference number: 4 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVVTSFS*NRCCVI
Trigger: TATGACACAGCACCTATTTCAAGAGAAAGATGTTAC...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGATTGATTGTCTCACTTaGAAATCAAAACACGGCAGA +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEIDCLT*KSKHGR
Trigger: TCTGCCGTGTTTTGATTTTCAAGTGAGACAATCAAT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGATTGATTGTCTCACTTaGAAATCAAAACACGGCAGA +
Preference number: 4 (lower is better)
Translates to: QRGTSLLINSIVLGYINWIDCLT*KSKHGR
Trigger: TCTGCCGTGTTTTGATTTTCAAGTGAGACAATCAAT...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCACCTATCTTTCTAAGTTaGTTTTTCAGGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSPIFLS*FFRMAQ
Trigger: CTGTGCCATCCTGAAAAATCAACTTAGAAAGATAGG...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTTCATTCCTGGGAGATTaGTGGGATGGGAAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTSFLGD*WDGKVN
Trigger: ATTCACCTTCCCATCCCAGCAATCTCCCAGGAATGA...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATAACTCATCAGAAATaGTACACTTGGGATTACCAC +
Preference number: 4 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSITHQK*YTWDYH
Trigger: GTGGTAATCCCAAGTGTAGCATTTCTGATGAGTTAT...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAAGATCTGAAATGCATTaGATCAAGCAAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRRSEMH*IKQACF
Trigger: AAAACATGCTTGCTTGATGCAATGCATTTCAGATCT...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAAGATCTGAAATGCATTaGATCAAGCAAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGRSEMH*IKQACF
Trigger: AAAACATGCTTGCTTGATGCAATGCATTTCAGATCT...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCTGTATAGAGTTGTTTaGAGGGATGAAATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGLYRVV*RDEIRY
Trigger: ATACCTGATTTCATCCCTGCAAACAACTCTATACAG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTACATCATCCAGATGGTaGAACATCTGGTACTATATG +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGTSSRW*NIWYYM
Trigger: CATATAGTACCAGATGTTGCACCATCTGGATGATGT...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTTTAAATGGGCTTATTaGAAGGGGTCCATACTGAAT +
Preference number: 4 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGFKWAY*KGSILN
Trigger: ATTCAGTATGGACCCCTTCCAATAAGCCCATTTAAA...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCTTTAAATGGGCTTATTaGAAGGGGTCCATACTGAAT +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIFKWAY*KGSILN
Trigger: ATTCAGTATGGACCCCTTCCAATAAGCCCATTTAAA...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGAAAACAGTTAATTGCTaGAGCGTTTTACACAAGAGG +
Preference number: 4 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEKTVNC*SVLHKR
Trigger: CCTCTTGTGTAAAACGCTCCAGCAATTAACTGTTTT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTACTGACTTTTGAGTCCTaGTTCTCTATGGGACAACTG +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLLTFES*FSMGQL
Trigger: CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAG...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAACAGTTGACTTTCCTTaGGAAATCATGAGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGTVDFP*EIMSLL
Trigger: TAAAAGACTCATGATTTCCCAAGGAAAGTCAACTGT...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp ATAACTCACATTCAATTCCAGACCCTGAATTTCTGCTaGCTCACTGTGAGCCATATTGTTGAGATTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ITHIQFQTLNFC*LTVSHIVEIVC
Trigger: ACAGACAATCTCAACAATATGGCTCACAGTGAGCAAGCAGAAATTCAGGGTCTGGAATTGAATGTGAGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTATATCTATTCTCGTCTaGAGGTACTTTATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGISILV*RYFILE
Trigger: TTCCAGGATAAAGTACCTTCAGACGAGAATAGATAT...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTATTCTTCCCCATGTCCTaGACCTGTCTTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLFFPMS*TCLSTF
Trigger: AAAAGTTGAAAGACAGGTTCAGGACATGGGGAAGAA...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTAAAGGTAGAACTCCATTaGGTTGCTGGAAAATGCATC +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLKVELH*VAGKCI
Trigger: GATGCATTTTCCAGCAACTCAATGGAGTTCTACCTT...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTTCTGCTTGCTCACTGTaGGCCATATTGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTSACSL*AILLRL
Trigger: CAATCTCAACAATATGGCTCACAGTGAGCAAGCAGA...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR TCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTATTACAAATACATTCCTaGGCACTGAGCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLLQIHS*ALSWAF
Trigger: AAAAGCCCAGCTCAGTGCTCAGGAATGTATTTGTAA...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCTTAAACTACTTTCTCTaGTTACCAAACCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMILNYFL*LPNQNP
Trigger: TGGGTTTTGGTTTGGTAAGCAGAGAAAGTAGTTTAA...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTACCAGAGGATGGCTTGTaGTTAATATCACACCTGTAC +
Preference number: 4 (lower is better)
Translates to: SFSCSGLNRDALISLGILPEDGL*LISHLY
Trigger: GTACAGGTGTGATATTAAGCACAAGCCATCCTCTGG...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp CATGTCCTGAACCTGTCTTTCAACTTTTACAAACTTCCCCATCATGCTTTGGTCACTCTCCTTTATTGTTaGTTTCCAGTAACTCATGTA +
Preference number: 4 (lower is better)
Translates to: HVLNLSFNFYKLPHHALVTLLYC*FPVTHV
Trigger: TACATGAGTTACTGGAAACCAACAATAAAGGAGAGT...GACCAAAGCATGATGGGGAAGTTTGTAAAAGTTGAAAGACAGGTTCAGGACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CCA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCCCCATTTCAGTAGCATaGAATTATGAGGATGATTTT +
Preference number: 4 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIPISVA*NYEDDF
Trigger: AAAATCATCCTCATAATTCCATGCTACTGAAATGGG...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp TCCCTGCCAATTCATAACTCATCAGAAATGCTACACTaGGGATTACCACCACTTTTTACAGATAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: SLPIHNSSEMLH*GLPPLFTDKET
Trigger: AGTTTCCTTATCTGTAAAAAGTGGTGGTAATCCCAAGTGTAGCATTTCTGATGAGTTATGAATTGGCAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTTGGATGTTAGGCAGGTaGTCATCTCAAGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTWMLGR*SSQVKD
Trigger: ATCTTTCACTTGAGATGATCACCTGCCTAACATCCA...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR TCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTACATATGTGGAGAGTATaGCTCACTCTCCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLHMWRV*LTLLYC
Trigger: ACAATAAAGGAGAGTGAGTCATACTCTCCACATATG...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTCAAACTTCCCCATCATaGTTTGGTCTTCGATTTCTG +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTQTSPS*FGLRFL
Trigger: CAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTG...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCATTAAACTACTTTCTCTaGTTACCAAACCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSLNYFL*LPNQNP
Trigger: TGGGTTTTGGTTTGGTAAGCAGAGAAAGTAGTTTAA...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTATGTGTGTTTTCTCCCTaGCAATTCATAACTCATCAG +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLCVFSP*QFITHQ
Trigger: CTGATGAGTTATGAATTGGCAGGGAGAAAACACACA...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR GCA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTTTTCTAGATCTGAAATaGATTGCATCAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: FCNLALSPTHHPDGATSGFLDLK*IASSKH
Trigger: ATGCTTGCTTGATGCAATGCATTTCAGATCTAGAAA...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTACTTGACTGGGCTGATTaGATCATTGCCATTTTGATG +
Preference number: 4 (lower is better)
Translates to: SFSCSGLNRDALISLGILLDWAD*IIAILM
Trigger: CATCAAAATGGCAATGATCCAATCAGCCCAGTCAAG...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTAAGATGGTGCAACATCTaGTACTATATGTCCAATGGA +
Preference number: 4 (lower is better)
Translates to: GTSLLINSIVLGYINWKLRWCNI*YYMSNG
Trigger: TCCATTGGACATATAGTACCAGATGTTGCACCATCT...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp GTAACTCATGTACATAAAGAAGAGCATAGTAACATGTaGGATGTTAGGCAGGTGATCATCTCAAGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VTHVHKEEHSNM*DVRQVIISSER
Trigger: TCTTTCACTTGAGATGATCACCTGCCTAACATCCAACATGTTACTATGCTCTTCTTTATGTACATGAGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTAGACAAGAAGAAAGCTaGTTTCTCCAACAATCTTCC +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTRQEES*FLQQSS
Trigger: GGAAGATTGTTGGAGAAACCAGCTTTCTTCTTGTCT...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR GCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTATAACTCATCAGAAATaGTACACTTGGGATTACCAC +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTITHQK*YTWDYH
Trigger: GTGGTAATCCCAAGTGTAGCATTTCTGATGAGTTAT...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTGTTCTGGGCATATATTaGTGCTTAATAAACCCTGTT +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTVLGIY*CLINPV
Trigger: AACAGGGTTTATTAAGCACCAATATATGCCCAGAAC...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTTTACACTGCCATTACTaGCTTCTAAAACCACTAAAG +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTLHCHY*LLKPLK
Trigger: CTTTAGTGGTTTTAGAAGCCAGTAATGGCAGTGTAA...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp AATTTGTCAATATTTCATGGAGTTCTGCTGAAACGATaGCAATTTCTTGGGCAAGTTTCAGAACGACTAGTA +
Preference number: 4 (lower is better)
Translates to: NLSIFHGVLLKR*QFLGQVSERLV
Trigger: TACTAGTCGTTCTGAAACTTGCCCAAGAAATTGCAATCGTTTCAGCAGAACTCCATGAAATATTGACAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
3UTR CAA 72 bp AGCCATTCTCAAGTTATTCTTATATACAGCCGATTTTaGGCGGTGTCAAAGAAATTCATTATTTCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: SHSQVILIYSRF*AVSKKFIISLE
Trigger: TTCAAGGGAAATAATGAATTTCTTTGACACCGCCAAAAATCGGCTGTATATAAGAATAACTTGAGAATGGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CCA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTAAAATTGGACGGTTCTaGAAATTTTGCCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTKIGRF*KFCLFT
Trigger: TGTAAACAGGCAAAATTTCCAGAACCGTCCAATTTT...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS GCA 90 bp AGCGGGGTCTTGGCCAGGAGCCCGATGCCCTGCGGGGTCCTCCGCTaGCCCTCGTCGCGGCCGCCGCCCTCCAGCAGCAGGGTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: SGVLARSPMPCGVLR*PSSRPPPSSSRVPS
Trigger: AGACGGGACCCTGCTGCTGGAGGGCGGCGGCCGCGACGAGGGGCAGCGGAGGACCCCGCAGGGCATCGGGCTCCTGGCCAAGACCCCGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS GCA 90 bp GGCCGGCGAGCCCAAGACAGCATCGCAGTTTATTTACAAGCCCGGTaGCAGCCGCCCTCCCGCCCGCCAGCCACACGCGCCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: GRRAQDSIAVYLQAR*QPPSRPPATRAAAA
Trigger: GGCGGCGGCGGCGCGTGTGGCTGGCGGGCGGGAGGGCGGCTGGCACCGGGCTTGTAAATAAACTGCGATGCTGTCTTGGGCTCGCCGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS TCA 90 bp GCAGCAGGGTCCCGTCTTTGTCGGCTCCGGCCCCGAGCGCCAAGGTaGCTTGCTCCACGTCGCCGGGCGCCAGCCCCACTTTCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: AAGSRLCRLRPRAPR*LAPRRRAPAPLSAP
Trigger: AGGAGCGGAAAGTGGGGCTGGCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCTCGGGGCCGGAGCCGACAAAGACGGGACCCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS GCA 90 bp AGGGTCCCGTCTTTGTCGGCTCCGGCCCCGAGCGCCAAGGTGACTTaGTCCACGTCGCCGGGCGCCAGCCCCACTTTCCGCTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: RVPSLSAPAPSAKVT*STSPGASPTFRSSS
Trigger: CGACGAGGAGCGGAAAGTGGGGCTGGCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCTCGGGGCCGGAGCCGACAAAGACGGGACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTCGGCTCAGCGGGGTCTaGGCCAGGAGCCCGATGCCC +
Preference number: 5 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFRLSGV*ARSPMP
Trigger: GGGCATCGGGCTCCTGGCCAAGACCCCGCTGAGCCG...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGGAGCGCCAAGGTGACTaGCTCCACGTCGCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVERQGD*LHVAGR
Trigger: GCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCTC...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp TTGCTCCTGCACCTTGAGGGCCAGCCCGGACCCCAGGATGCCCGCTGGAAGGGCTTGGCGTTGTTTCTCTaGACTGGGCGGCTCAGCGGG +
Preference number: 5 (lower is better)
Translates to: LLLHLEGQPGPQDARWKGLALFL*TGRLSG
Trigger: CCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCAA...GCCCTTCCAGCGGGCATCCTGGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTGCCGCCCTGCGCGCCTaGAGCCCCATCTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRAALRA*SPICLA
Trigger: GGCGAGGCAGATGGGGCTCAAGGCGCGCAGGGCGGC...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGTGTTGCTCCTGCACCTaGAGGGCCAGCCCGGACCCC +
Preference number: 5 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPCCSCT*RASPDP
Trigger: GGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAACA...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCGGCCCCGCCAGCCTTaGTATCGGCAGCAACATCCA +
Preference number: 5 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMRPRQP*YRQQHP
Trigger: TGGATGTTGCTGCCGATACAAAGGCTGGCGGGGCCG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGGTGCTTCTGACGGTGTaGCTCCTGCACCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLVLLTV*LLHLEG
Trigger: GCCCTCAAGGTGCAGGAGCAACACCGTCAGAAGCAC...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGGGCTGCCTGCTGGCTaGTTTAGGGGCCAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMGLPAG*FRGQLA
Trigger: AGCCAACTGGCCCCTAAACAAGCCAGCAGGCAGCCC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTGAGCGCCAAGGTGACTaGCTCCACGTCGCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCERQGD*LHVAGR
Trigger: GCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCTC...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCGGCCCCGCCAGCCTTaGTATCGGCAGCAACATCCA +
Preference number: 5 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPRPRQP*YRQQHP
Trigger: TGGATGTTGCTGCCGATACAAAGGCTGGCGGGGCCG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CAGGCTTCGCAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGCAACCACTGTTGCTCCTGCACCTaGAGGGCCAGCCCGGACCCC +
Preference number: 5 (lower is better)
Translates to: QASQGGGQNIALVSHSNHCCSCT*RASPDP
Trigger: GGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAACA...GTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTTCCAGCTCCTCGTGGTaGACCGACATCAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFSSSSW*TDIRDR
Trigger: TCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGGA...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTTGGCGTTGTTTCTCTaGACTGGGCGGCTCAGCGGG +
Preference number: 5 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVLALFL*TGRLSG
Trigger: CCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCAA...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCGCCGGTACTTGGCGTaGTTTCTCTTGACTGGGCGG +
Preference number: 5 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPRRYLA*FLLTGR
Trigger: CCGCCCAGTCAAGAGAAACAACGCCAAGTACCGGCG...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp TTGCTCCTGCACCTTGAGGGCCAGCCCGGACCCCAGGATGCCCGCTGGAAGGGCACAGTCTCATACTCCTaGAATGTGGTCAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: LLLHLEGQPGPQDARWKGTVSYS*NVVRTA
Trigger: GGCTGTCCTGACCACATTCAAGGAGTATGAGACTGT...GCCCTTCCAGCGGGCATCCTGGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTTGTTGCTCCTGCACCTaGAGGGCCAGCCCGGACCCC +
Preference number: 5 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCCCSCT*RASPDP
Trigger: GGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAACA...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTTGTTGCTCCTGCACCTaGAGGGCCAGCCCGGACCCC +
Preference number: 5 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRCCSCT*RASPDP
Trigger: GGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAACA...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCGAGACTTCTTGTGTTTaGGCGTGGAGGGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAETSCV*AWREVQ
Trigger: CTGGACCTCCCTCCACGCCAAAACACAAGAAGTCTC...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGAATGACAGGAGCTCCTaGGGGGCAGAGAACAAGGGG +
Preference number: 5 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMNDRSS*GAENKG
Trigger: CCCCTTGTTCTCTGCCCCCAAGGAGCTCCTGTCATT...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCCCTCTGCTTCCTCATaGAGGTCCTCCATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMPSASS*RSSMPV
Trigger: CACAGGCATGGAGGACCTCAATGAGGAAGCAGAGGG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS CCA 90 bp CCCATAGCCCCTGTCTTCCGCCATGGGGTCACCTGTCCCGGCATCTaGGAGGGAGACACACATATGAACGGCAGGCCACAGACCTGGAAA +
Preference number: 5 (lower is better)
Translates to: PIAPVFRHGVTCPGI*EGDTHMNGRPQTWK
Trigger: TTTCCAGGTCTGTGGCCTGCCGTTCATATGTGTGTCTCCCTCCCAGATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGGGCTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGGCCAGAACATTGCCTaGGTTTCCCACAGCAACCAC +
Preference number: 5 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMGQNIA*VSHSNH
Trigger: GTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGGCCGTGATGAGTTCTTaGCTGTGGGCACAGATGGCT +
Preference number: 5 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMAVMSS*LWAQMA
Trigger: AGCCATCTGTGCCCACAGCAAAGAACTCATCACGGC...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGCTGAGGAAGGAGGAGTaGCCTGAACCTTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLLRKEE*PEPFQN
Trigger: GTTCTGGAAAGGTTCAGGCAACTCCTCCTTCCTCAG...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CAGAGGCATGGAGCCGCTGGGCGTGAAGGGGTCCGTGTCTGTGTCCGTCTCACCCTGAGGAAGGAGGAGTaGCCTGAACCTTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: QRHGAAGREGVRVCVRLTLRKEE*PEPFQN
Trigger: GTTCTGGAAAGGTTCAGGCAACTCCTCCTTCCTCAG...GGTGAGACGGACACAGACACGGACCCCTTCACGCCCAGCGGCTCCATGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTTCCAGCTCCTCGTGGTaGACCGACATCAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: SPCLGGATTHTHAFDAAISSSSW*TDIRDR
Trigger: TCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGGA...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATCATTTGATGCAGCCATaGGTGTCCCCGCTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDHLMQP*VSPLVS
Trigger: GCTTACCAGCGGGGACACCAATGGCTGCATCAAATG...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCGCACACGCATGCATTaGATGCAGCCATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMRTRMH*MQPLVS
Trigger: GGACACCAATGGCTGCATCAAATGCATGCGTGTGCG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATCGCACACGCATGCATTaGATGCAGCCATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDRTRMH*MQPLVS
Trigger: GGACACCAATGGCTGCATCAAATGCATGCGTGTGCG...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGCCTTGGCCTGGGACTTaGGGCTTTGGTTCTAAGTTC +
Preference number: 5 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLPWPGT*GFGSKF
Trigger: GAACTTAGAACCAAAGCCCAAAGTCCCAGGCCAAGG...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGAATGACAGGAGCTCCTaGGGGGCAGAGAACAAGGGG +
Preference number: 5 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPNDRSS*GAENKG
Trigger: CCCCTTGTTCTCTGCCCCCAAGGAGCTCCTGTCATT...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS TCA 90 bp CGTAGATCAAAGTTTGGATGCGCCGGTACTTGGCGTTGTTTCTCTTaGCTGGGCGGCTCAGCGGGGTCTTGGCCAGGAGCCCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: RRSKFGCAGTWRCFS*LGGSAGSWPGARCP
Trigger: AGGGCATCGGGCTCCTGGCCAAGACCCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCAAGTACCGGCGCATCCAAACTTTGATCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000639358.1
CDS-3UTR CAA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATTGGATGCGCCGGTACTaGGCGTTGTTTCTCTTGACT +
Preference number: 5 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDWMRRY*ALFLLT
Trigger: AGTCAAGAGAAACAACGCCAAGTACCGGCGCATCCA...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGGAGGTGGCCAGAACATaGCCTTGGTTTCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPEVART*PWFPTA
Trigger: TGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTC...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGGCCGTGATGAGTTCTTaGCTGTGGGCACAGATGGCT +
Preference number: 5 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPAVMSS*LWAQMA
Trigger: AGCCATCTGTGCCCACAGCAAAGAACTCATCACGGC...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGTGTTGCTCCTGCACCTaGAGGGCCAGCCCGGACCCC +
Preference number: 5 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMCCSCT*RASPDP
Trigger: GGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAACA...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGGAGACTTCTTGTGTTTaGGCGTGGAGGGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPETSCV*AWREVQ
Trigger: CTGGACCTCCCTCCACGCCAAAACACAAGAAGTCTC...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGAGACTTCTTGTGTTTaGGCGTGGAGGGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGETSCV*AWREVQ
Trigger: CTGGACCTCCCTCCACGCCAAAACACAAGAAGTCTC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGCAACCGTTCCATGTGTaGCATGTGCATATCCACGAG +
Preference number: 5 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLQPFHV*HVHIHE
Trigger: CTCGTGGATATGCACATGCAACACATGGAACGGTTG...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGCCTCTCCACATACGTaGTTGCTGAGGAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGASPHT*LLRKEE
Trigger: CTCCTCCTTCCTCAGCAACAACGTATGTGGAGAGGC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTCGCACACGCATGCATTaGATGCAGCCATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIRTRMH*MQPLVS
Trigger: GGACACCAATGGCTGCATCAAATGCATGCGTGTGCG...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGAACTGCCCCCTCCTaGGAAAAGTATTCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIGTAPS*EKYSEG
Trigger: CCCCTCTGAATACTTTTCCAAGGAGGGGGCAGTTCC...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS CCA 90 bp CCTACAGCCTCCAGAGGGCGCTTTTCTGCCACTCTTCCCGTGCCCTaGTCTCTAAATTGCTTTGCACCTGGCACCGCCCCATCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: PTASRGRFSATLPVP*SLNCFAPGTAPSFK
Trigger: CTTGAAGGATGGGGCGGTGCCAGGTGCAAAGCAATTTAGAGACCAGGGCACGGGAAGAGTGGCAGAAAAGCGCCCTCTGGAGGCTGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCGTAGATCAAAGTTaGGATGCGCCGGTACTTGGC +
Preference number: 5 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGVVDQS*DAPVLG
Trigger: GCCAAGTACCGGCGCATCCAAACTTTGATCTACGAC...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATACAGTCTCATACTCCTaGAATGTGGTCAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDTVSYS*NVVRTA
Trigger: GGCTGTCCTGACCACATTCAAGGAGTATGAGACTGT...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTGTGCTTCTGACGGTGTaGCTCCTGCACCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCVLLTV*LLHLEG
Trigger: GCCCTCAAGGTGCAGGAGCAACACCGTCAGAAGCAC...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GGAGGTGCCCTTGGTTGGGTAATACTCCGTGACCTGCACCTGCAACCGTTCCATGTGCTTCTGACGGTGTaGCTCCTGCACCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GGALGWVILRDLHLQPFHVLLTV*LLHLEG
Trigger: GCCCTCAAGGTGCAGGAGCAACACCGTCAGAAGCAC...ATGGAACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATCAACCGTTCCATGTGTaGCATGTGCATATCCACGAG +
Preference number: 5 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDQPFHV*HVHIHE
Trigger: CTCGTGGATATGCACATGCAACACATGGAACGGTTG...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTCTGAGGAAGGAGGAGTaGCCTGAACCTTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: SPCLGGATTHTHAFDAAILRKEE*PEPFQN
Trigger: GTTCTGGAAAGGTTCAGGCAACTCCTCCTTCCTCAG...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTCCAGCTCCTCGTGGTaGACCGACATCAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVSSSSW*TDIRDR
Trigger: TCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGGA...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCACTTTCAGCCATATaGAAGGAGTGGGGAAAAGGC +
Preference number: 5 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDALSAI*KEWGKG
Trigger: GCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTGC...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS CCA 90 bp GGGAGACACACATATGAACGGCAGGCCACAGACCTGGAAAAGGCTTaGGGACCCCACTGTTCGGTCAAAGCCTTCCACGCCTCTGGATGT +
Preference number: 5 (lower is better)
Translates to: GRHTYERQATDLEKA*GPHCSVKAFHASGC
Trigger: ACATCCAGAGGCGTGGAAGGCTTTGACCGAACAGTGGGGTCCCCAAGCCTTTTCCAGGTCTGTGGCCTGCCGTTCATATGTGTGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGCGGCTCAGCGGGGTCTaGGCCAGGAGCCCGATGCCC +
Preference number: 5 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVRLSGV*ARSPMP
Trigger: GGGCATCGGGCTCCTGGCCAAGACCCCGCTGAGCCG...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR CAA 90 bp GTGCATCCACCTCTGGGACGTCTTTCTCAACCAGGTAGACAAGAAATGAAGAAACGGCTCAGCGGGGTCTaGGCCAGGAGCCCGATGCCC +
Preference number: 5 (lower is better)
Translates to: VHPPLGRLSQPGRQEMKKRLSGV*ARSPMP
Trigger: GGGCATCGGGCTCCTGGCCAAGACCCCGCTGAGCCG...TTTCTTCATTTCTTGTCTACCTGGTTGAGAAAGACGTCCCAGAGGTGGATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGACAGTCTCATACTCCTaGAATGTGGTCAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPTVSYS*NVVRTA
Trigger: GGCTGTCCTGACCACATTCAAGGAGTATGAGACTGT...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GTGTCTGTGTCCGTCTCACCCTCGGCGAGGTACCGCTTCTCCCTCATCCAGCTCACAGTCTCATACTCCTaGAATGTGGTCAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: VSVSVSPSARYRFSLIQLTVSYS*NVVRTA
Trigger: GGCTGTCCTGACCACATTCAAGGAGTATGAGACTGT...GAGCTGGATGAGGGAGAAGCGGTACCTCGCCGAGGGTGAGACGGACACAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTCGGCCCCGCCAGCCTTaGTATCGGCAGCAACATCCA +
Preference number: 5 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSRPRQP*YRQQHP
Trigger: TGGATGTTGCTGCCGATACAAAGGCTGGCGGGGCCG...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGCCGTGATGAGTTCTTaGCTGTGGGCACAGATGGCT +
Preference number: 5 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSAVMSS*LWAQMA
Trigger: AGCCATCTGTGCCCACAGCAAAGAACTCATCACGGC...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTTGTTGCTCCTGCACCTaGAGGGCCAGCCCGGACCCC +
Preference number: 5 (lower is better)
Translates to: NETQRSQCKGTPLVKLATCCSCT*RASPDP
Trigger: GGGGTCCGGGCTGGCCCTCAAGGTGCAGGAGCAACA...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTCAACCGTTCCATGTGTaGCATGTGCATATCCACGAG +
Preference number: 5 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIQPFHV*HVHIHE
Trigger: CTCGTGGATATGCACATGCAACACATGGAACGGTTG...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTAAATCGGAATACCTGTaGTCCTCCTTCTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFKSEYL*SSFFSA
Trigger: AGCAGAGAAGAAGGAGGACAACAGGTATTCCGATTT...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGAAATCGGAATACCTGTaGTCCTCCTTCTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: RLWEAPAWVGPPRTRMHLKSEYL*SSFFSA
Trigger: AGCAGAGAAGAAGGAGGACAACAGGTATTCCGATTT...CAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCGAGCATAGTAACATGTaGGATGTTAGGCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAEHSNM*DVRQVI
Trigger: GATCACCTGCCTAACATCCAACATGTTACTATGCTC...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCACTGGGAACCTCCATTaGTTCTTCAAAGACTGGTGT +
Preference number: 5 (lower is better)
Translates to: GSPCLGGATTHTHAFDAATGNLH*FFKDWC
Trigger: ACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGT...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS CCA 90 bp TGTCTTCGATGGGGAAGTCATTCCCATAGCCCCTGTCTTCCGCCATaGGGTCACCTGTCCCGGCATCTGGGAGGGAGACACACATATGAA +
Preference number: 5 (lower is better)
Translates to: CLRWGSHSHSPCLPP*GHLSRHLGGRHTYE
Trigger: TTCATATGTGTGTCTCCCTCCCAGATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGGGCTATGGGAATGACTTCCCCATCGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGCCGCCCTGCGCGCCTaGAGCCCCATCTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEAALRA*SPICLA
Trigger: GGCGAGGCAGATGGGGCTCAAGGCGCGCAGGGCGGC...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCTGGATGCGCCGGTACTaGGCGTTGTTTCTCTTGACT +
Preference number: 5 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSWMRRY*ALFLLT
Trigger: AGTCAAGAGAAACAACGCCAAGTACCGGCGCATCCA...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS-3UTR CAA 90 bp CAGGCTTCGCAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGCAACCACGTCGTAGATCAAAGTTaGGATGCGCCGGTACTTGGC +
Preference number: 5 (lower is better)
Translates to: QASQGGGQNIALVSHSNHVVDQS*DAPVLG
Trigger: GCCAAGTACCGGCGCATCCAAACTTTGATCTACGAC...GTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGGGCCAGAACATTGCCTaGGTTTCCCACAGCAACCAC +
Preference number: 5 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLGQNIA*VSHSNH
Trigger: GTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCC...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTGCCGTGATGAGTTCTTaGCTGTGGGCACAGATGGCT +
Preference number: 5 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCAVMSS*LWAQMA
Trigger: AGCCATCTGTGCCCACAGCAAAGAACTCATCACGGC...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGAAATCGGAATACCTGTaGTCCTCCTTCTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMKSEYL*SSFFSA
Trigger: AGCAGAGAAGAAGGAGGACAACAGGTATTCCGATTT...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCCTGAGGAAGGAGGAGTaGCCTGAACCTTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSLRKEE*PEPFQN
Trigger: GTTCTGGAAAGGTTCAGGCAACTCCTCCTTCCTCAG...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCATTTGATGCAGCCATaGGTGTCCCCGCTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRHLMQP*VSPLVS
Trigger: GCTTACCAGCGGGGACACCAATGGCTGCATCAAATG...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCCTTTGTCCTTCAGATaGCCAGCATGTCAAATGGAA +
Preference number: 5 (lower is better)
Translates to: LWEAPAWVGPPRTRMHLMPLSFR*PACQME
Trigger: TTCCATTTGACATGCTGGCAATCTGAAGGACAAAGG...CATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTTTGTTTAGGGGCCAGTaGGCTCAGTTTGGAATGGTT +
Preference number: 5 (lower is better)
Translates to: SPCLGGATTHTHAFDAAILFRGQ*AQFGMV
Trigger: AACCATTCCAAACTGAGCCAACTGGCCCCTAAACAA...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGAGCCACCATGCACAGTaGACTTTCCTTGGGAAATCA +
Preference number: 5 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVSHHAQ*TFLGKS
Trigger: TGATTTCCCAAGGAAAGTCAACTGTGCATGGTGGCT...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATAATTACCAGATCAGGTaGGCTTCCATGGGAAACCTT +
Preference number: 5 (lower is better)
Translates to: AVGSPCLGGATTHTHAFDNYQIR*ASMGNL
Trigger: AAGGTTTCCCATGGAAGCCAACCTGATCTGGTAATT...ATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTAGCACTAAAGGCCACTaGTGGAATAGTTGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: SPCLGGATTHTHAFDAAISTKGH*WNSCVP
Trigger: GGGAACACAACTATTCCACAAGTGGCCTTTAGTGCT...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS TCA 90 bp GACAATCAGGAACCTGAAACACGCTTCCTCCCTCTGCTTCCTCATTaGGGTCCTCCATGCCTGTGCCACCATGGCCCTCCTGCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: DNQEPETRFLPLLPH*GPPCLCHHGPPASV
Trigger: AACAGAAGCAGGAGGGCCATGGTGGCACAGGCATGGAGGACCTCAATGAGGAAGCAGAGGGAGGAAGCGTGTTTCAGGTTCCTGATTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638588.1
ENST00000639496.1
CDS GCA 90 bp AGAGGGCGCTTTTCTGCCACTCTTCCCGTGCCCTGGTCTCTAAATTaGTTTGCACCTGGCACCGCCCCATCCTTCAAGTTGACCTCCATA +
Preference number: 5 (lower is better)
Translates to: RGRFSATLPVPWSLN*FAPGTAPSFKLTSI
Trigger: TATGGAGGTCAACTTGAAGGATGGGGCGGTGCCAGGTGCAAAGCAATTTAGAGACCAGGGCACGGGAAGAGTGGCAGAAAAGCGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CCA 90 bp CAGGTTTCCAGGCTCCTAACTTGGGAGCCTGCAGCCCTAGACTCCTaGGAATACATCACAATGCCTCAGCCCAAGGGACAGGAGGAGTTA +
Preference number: 5 (lower is better)
Translates to: QVSRLLTWEPAALDS*EYITMPQPKGQEEL
Trigger: TAACTCCTCCTGTCCCTTGGGCTGAGGCATTGTGATGTATTCCCAGGAGTCTAGGGCTGCAGGCTCCCAAGTTAGGAGCCTGGAAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp GAAAAGGTGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGTCTCCAGAGGTGGCCAGAACATaGCCTTGGTTTCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: EKVAAIRRPSHVLGVLSPEVART*PWFPTA
Trigger: TGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTC...TGGAGACAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCACCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp AGGAAAAGGTGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGTCTCGCCGTGATGAGTTCTTaGCTGTGGGCACAGATGGCT +
Preference number: 5 (lower is better)
Translates to: RKRWRQSDGLPTFWVSCLAVMSS*LWAQMA
Trigger: AGCCATCTGTGCCCACAGCAAAGAACTCATCACGGC...GAGACAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCACCTTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp GAGGCTGTGGGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTACGGTTCTGGAAATTTaGCCTGTTTACACATCTGTA +
Preference number: 5 (lower is better)
Translates to: EAVGSPCLGGATTHTHAFTVLEI*PVYTSV
Trigger: TACAGATGTGTAAACAGGCAAAATTTCCAGAACCGT...AAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCCCACAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCGCTGCATACAGACATTaGTTTAGGTCATCTGGATTA +
Preference number: 5 (lower is better)
Translates to: GSPCLGGATTHTHAFDAAAAYRH*FRSSGL
Trigger: TAATCCAGATGACCTAAACAAATGTCTGTATGCAGC...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTCCTTGGCCTGGGACTTaGGGCTTTGGTTCTAAGTTC +
Preference number: 5 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCPWPGT*GFGSKF
Trigger: GAACTTAGAACCAAAGCCCAAAGTCCCAGGCCAAGG...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GGAAGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCTCTGTCTGTATAGAGTaGTTTGCAGGGATGAAATCA +
Preference number: 5 (lower is better)
Translates to: GSPCLGGATTHTHAFDAASVCIE*FAGMKS
Trigger: TGATTTCATCCCTGCAAACAACTCTATACAGACAGA...GGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS TCA 90 bp TGCAGGCCTCAGCTGGGACTTTTGCTCTGTCAGTCTCTATCCTGGTaGCCTTGGAGAAGTCACTTTCTGAGCCGCACACATCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: CRPQLGLLLCQSLSW*PWRSHFLSRTHQRP
Trigger: AGGCCTCTGATGTGTGCGGCTCAGAAAGTGACTTCTCCAAGGTCACCAGGATAGAGACTGACAGAGCAAAAGTCCCAGCTGAGGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAGCAGGGTCCCGTCTTaGTCGGCTCCGGCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: QRGTSLLINSIVLGYINWSRVPS*SAPAPS
Trigger: GCTCGGGGCCGGAGCCGACAAAGACGGGACCCTGCT...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR CAA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACCGCCGGTACTTGGCGTaGTTTCTCTTGACTGGGCGG +
Preference number: 5 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNRRYLA*FLLTGR
Trigger: CCGCCCAGTCAAGAGAAACAACGCCAAGTACCGGCG...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR CAA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGGGCCAGAACATTGCCTaGGTTTCCCACAGCAACCAC +
Preference number: 5 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMGQNIA*VSHSNH
Trigger: GTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCC...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGGGCCAGAACATTGCCTaGGTTTCCCACAGCAACCAC +
Preference number: 5 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKGQNIA*VSHSNH
Trigger: GTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCC...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGGAGGTGGCCAGAACATaGCCTTGGTTTCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMEVART*PWFPTA
Trigger: TGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTC...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACCACAGGGCATCTGCATAGGTCTCAAACTCCTCTTTCATCTCCTCTCCTTGTGGTGCTTCTGACGGTGTaGCTCCTGCACCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: TTGHLHRSQTPLSSPLLVVLLTV*LLHLEG
Trigger: GCCCTCAAGGTGCAGGAGCAACACCGTCAGAAGCAC...CACAAGGAGAGGAGATGAAAGAGGAGTTTGAGACCTATGCAGATGCCCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGCGGAAACGCTCTTTATaGTTTAAGCCAACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVRKRSL*FKPTGF
Trigger: AAAGCCTGTTGGCTTAAACAATAAAGAGCGTTTCCG...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTCGGAAACGCTCTTTATaGTTTAAGCCAACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGRKRSL*FKPTGF
Trigger: AAAGCCTGTTGGCTTAAACAATAAAGAGCGTTTCCG...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGCCCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTCGGAAACGCTCTTTATaGTTTAAGCCAACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: SPCLGGATTHTHAFDAAIRKRSL*FKPTGF
Trigger: AAAGCCTGTTGGCTTAAACAATAAAGAGCGTTTCCG...AATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGGAGACTTCTTGTGTTTaGGCGTGGAGGGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMETSCV*AWREVQ
Trigger: CTGGACCTCCCTCCACGCCAAAACACAAGAAGTCTC...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GACCGACATCAGGGACAGAGGTGTGTCACTGTCTCGCGTGATGCTACGTCTCTGTCTCCACATACGTTGTaGCTGAGGAAGGAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: DRHQGQRCVTVSRDATSLSPHTL*LRKEEL
Trigger: CAACTCCTCCTTCCTCAGCAACAACGTATGTGGAGA...CAGAGACGTAGCATCACGCGAGACAGTGACACACCTCTGTCCCTGATGTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGCATTTGATGCAGCCATaGGTGTCCCCGCTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: QGEWADLTFESWFSMGQLHLMQP*VSPLVS
Trigger: GCTTACCAGCGGGGACACCAATGGCTGCATCAAATG...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGAGCCACCATGCACAGTaGACTTTCCTTGGGAAATCA +
Preference number: 5 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVSHHAQ*TFLGKS
Trigger: TGATTTCCCAAGGAAAGTCAACTGTGCATGGTGGCT...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CCCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTAATGAAGATGTTCATTaGAGCCAACAGAGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: PCLGGATTHTHAFDAAIGNEDVH*SQQRPV
Trigger: AACAGGCCTCTGTTGGCTCAAATGAACATCTTCATT...ACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGACCTTTGACAAGGTCTaGTCTTCAGTTTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVTFDKV*SSVSSS
Trigger: AGATGAGGAAACTGAAGACAAGACCTTGTCAAAGGT...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS GCA 90 bp GCGCTTTTCTGCCACTCTTCCCGTGCCCTGGTCTCTAAATTGCTTTaGACCTGGCACCGCCCCATCCTTCAAGTTGACCTCCATAACAAT +
Preference number: 5 (lower is better)
Translates to: ALFCHSSRALVSKLL*TWHRPILQVDLHNN
Trigger: ATTGTTATGGAGGTCAACTTGAAGGATGGGGCGGTGCCAGGTGCAAAGCAATTTAGAGACCAGGGCACGGGAAGAGTGGCAGAAAAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS GCA 90 bp CAGAAGCCAGCAAAGGACACAGAAGCCAGCAAACAACACACACTGTaGAGGCCTCAGCTGGGACTTTTGCTCTGTCAGTCTCTATCCTGG +
Preference number: 5 (lower is better)
Translates to: QKPAKDTEASKQHTL*RPQLGLLLCQSLSW
Trigger: CCAGGATAGAGACTGACAGAGCAAAAGTCCCAGCTGAGGCCTGCACAGTGTGTGTTGTTTGCTGGCTTCTGTGTCCTTTGCTGGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CCA 90 bp CAGGGAGGTGGCCAGAACATTGCCTTGGTTTCCCACAGCAACCACTaGCACAGAGGCAATCAGCACAAAGATGTCAGTAACAGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: QGGGQNIALVSHSNH*HRGNQHKDVSNRSQ
Trigger: CTGGCTTCTGTTACTGACATCTTTGTGCTGATTGCCTCTGTGCCAGTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCCGGCCCCGCCAGCCTTaGTATCGGCAGCAACATCCA +
Preference number: 5 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLRPRQP*YRQQHP
Trigger: TGGATGTTGCTGCCGATACAAAGGCTGGCGGGGCCG...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CAATTAAGGAAAAGGTGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTGGCCAGAACATTGCCTaGGTTTCCCACAGCAACCAC +
Preference number: 5 (lower is better)
Translates to: QLRKRWRQSDGLPTFWVSGQNIA*VSHSNH
Trigger: GTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCC...AGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCACCTTTTCCTTAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp CCTGCCTGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGAGCTTTCCTTTAGTATaGCTACCACGAGGATTAGAA +
Preference number: 5 (lower is better)
Translates to: PAWVGPPRTRMHLMQPLVSFPLV*LPRGLE
Trigger: TTCTAATCCTCGTGGTAGCAATACTAAAGGAAAGCT...CACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CAA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATGCCTCTCCACATACGTaGTTGCTGAGGAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDASPHT*LLRKEE
Trigger: CTCCTCCTTCCTCAGCAACAACGTATGTGGAGAGGC...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTCCTTGGCCTGGGACTTaGGGCTTTGGTTCTAAGTTC +
Preference number: 5 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSPWPGT*GFGSKF
Trigger: GAACTTAGAACCAAAGCCCAAAGTCCCAGGCCAAGG...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAATAACCCATGCCCTTaGTCCTTCAGATTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCNNPCP*SFRLPA
Trigger: TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATT...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAATCAACCCACTCAGCCTaGACTGGGCTGATTGGATCA +
Preference number: 5 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQSTHSA*TGLIGS
Trigger: TGATCCAATCAGCCCAGTCAAGGCTGAGTGGGTTGA...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGGGGCTGCCTGCTGGCTaGTTTAGGGGCCAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVGLPAG*FRGQLA
Trigger: AGCCAACTGGCCCCTAAACAAGCCAGCAGGCAGCCC...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAGAGCTAGGGCCTGATTaGAGAGGAAGAAGGGGGAGA +
Preference number: 5 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKELGPD*RGRRGR
Trigger: TCTCCCCCTTCTTCCTCTCAAATCAGGCCCTAGCTC...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAGAGAACAAGGGGCACTaGTGGATGATCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKENKGH*WMICSH
Trigger: GTGGCTGCAGATCATCCACAAGTGCCCCTTGTTCTC...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCAATTACCAGATCAGGTaGGCTTCCATGGGAAACCTT +
Preference number: 5 (lower is better)
Translates to: PPRTRMHLMQPLVSPLVSNYQIR*ASMGNL
Trigger: AAGGTTTCCCATGGAAGCCAACCTGATCTGGTAATT...GCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAACCCAAATCTTGCAACTaGGCCACCACCTGGACTCTT +
Preference number: 5 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQPKSCN*ATTWTL
Trigger: AAGAGTCCAGGTGGTGGCCAAGTTGCAAGATTTGGG...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTAGCACTAAAGGCCACTaGTGGAATAGTTGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRSTKGH*WNSCVP
Trigger: GGGAACACAACTATTCCACAAGTGGCCTTTAGTGCT...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS GCA 90 bp TTAGAAACCAAGGTGACAGGTTTCCAGGCTCCTAACTTGGGAGCCTaGAGCCCTAGACTCCTGGGAATACATCACAATGCCTCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: LETKVTGFQAPNLGA*SPRLLGIHHNASAQ
Trigger: TTGGGCTGAGGCATTGTGATGTATTCCCAGGAGTCTAGGGCTGCAGGCTCCCAAGTTAGGAGCCTGGAAACCTGTCACCTTGGTTTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CCA 90 bp TTCTGCCACTCTTCCCGTGCCCTGGTCTCTAAATTGCTTTGCACCTaGCACCGCCCCATCCTTCAAGTTGACCTCCATAACAATCCAATC +
Preference number: 5 (lower is better)
Translates to: FCHSSRALVSKLLCT*HRPILQVDLHNNPI
Trigger: GATTGGATTGTTATGGAGGTCAACTTGAAGGATGGGGCGGTGCCAGGTGCAAAGCAATTTAGAGACCAGGGCACGGGAAGAGTGGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CCA 90 bp AGGACACAGAAGCCAGCAAACAACACACACTGTGCAGGCCTCAGCTaGGACTTTTGCTCTGTCAGTCTCTATCCTGGTGACCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: RTQKPANNTHCAGLS*DFCSVSLYPGDLGE
Trigger: TTCTCCAAGGTCACCAGGATAGAGACTGACAGAGCAAAAGTCCCAGCTGAGGCCTGCACAGTGTGTGTTGTTTGCTGGCTTCTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp GTGCATCCACCTCTGGGACGTCTTTCTCAACCAGGTAGACAAGAAATGAAGAAACGCCGGTACTTGGCGTaGTTTCTCTTGACTGGGCGG +
Preference number: 5 (lower is better)
Translates to: VHPPLGRLSQPGRQEMKKRRYLA*FLLTGR
Trigger: CCGCCCAGTCAAGAGAAACAACGCCAAGTACCGGCG...TTTCTTCATTTCTTGTCTACCTGGTTGAGAAAGACGTCCCAGAGGTGGATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp ATTAAGGAAAAGGTGGCGGCAATCAGACGGCCTTCCCACGTTTTGGGTGTCTTGTGGATGCGCCGGTACTaGGCGTTGTTTCTCTTGACT +
Preference number: 5 (lower is better)
Translates to: IKEKVAAIRRPSHVLGVLWMRRY*ALFLLT
Trigger: AGTCAAGAGAAACAACGCCAAGTACCGGCGCATCCA...CAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCACCTTTTCCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGACGGCCCCGCCAGCCTTaGTATCGGCAGCAACATCCA +
Preference number: 5 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGRPRQP*YRQQHP
Trigger: TGGATGTTGCTGCCGATACAAAGGCTGGCGGGGCCG...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCGAGGTGGCCAGAACATaGCCTTGGTTTCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: IATVALDKTVRENSSVSCEVART*PWFPTA
Trigger: TGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTC...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGCAACCGTTCCATGTGTaGCATGTGCATATCCACGAG +
Preference number: 5 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKQPFHV*HVHIHE
Trigger: CTCGTGGATATGCACATGCAACACATGGAACGGTTG...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAATCGGAATACCTGTaGTCCTCCTTCTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCKSEYL*SSFFSA
Trigger: AGCAGAGAAGAAGGAGGACAACAGGTATTCCGATTT...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTTCTCCACATACGTTGTaGCTGAGGAAGGAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSSPHTL*LRKEEL
Trigger: CAACTCCTCCTTCCTCAGCAACAACGTATGTGGAGA...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGTTGCCTGAACCTTTCCAGAACTGGGTCCCCCTCGGGGCAGGTTCACAGGGTCACGGTTCTGGAAATTTaGCCTGTTTACACATCTGTA +
Preference number: 5 (lower is better)
Translates to: SCLNLSRTGSPSGQVHRVTVLEI*PVYTSV
Trigger: TACAGATGTGTAAACAGGCAAAATTTCCAGAACCGT...GACCCTGTGAACCTGCCCCGAGGGGGACCCAGTTCTGGAAAGGTTCAGGCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp TGGGTGGGGCCACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGTTCATGTCTGATGCATaGAGCATTCTGGTATATTTC +
Preference number: 5 (lower is better)
Translates to: WVGPPRTRMHLMQPLVSPFMSDA*SILVYF
Trigger: GAAATATACCAGAATGCTCAATGCATCAGACATGAA...CGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGTGGCCCCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTCCTTTGTCCTTCAGATaGCCAGCATGTCAAATGGAA +
Preference number: 5 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCPLSFR*PACQME
Trigger: TTCCATTTGACATGCTGGCAATCTGAAGGACAAAGG...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTTGTGGTCATGTCATCTaGGGTCATGTTAACCAGTTC +
Preference number: 5 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRCGHVI*GHVNQF
Trigger: GAACTGGTTAACATGACCCAAGATGACATGACCACA...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATTCAACCCACTCAGCCTaGACTGGGCTGATTGGATCA +
Preference number: 5 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDSTHSA*TGLIGS
Trigger: TGATCCAATCAGCCCAGTCAAGGCTGAGTGGGTTGA...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp ACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTTTTTTGCTAGGCCTTTaGAAGACAGCAGGAATCTGG +
Preference number: 5 (lower is better)
Translates to: TRMHLMQPLVSPLVSVGCFLLGL*KTAGIW
Trigger: CCAGATTCCTGCTGTCTTCAAAAGGCCTAGCAAAAA...ACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATGAGAACAAGGGGCACTaGTGGATGATCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: DNMGILWDKARGPKLCSNENKGH*WMICSH
Trigger: GTGGCTGCAGATCATCCACAAGTGCCCCTTGTTCTC...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATGGAACTGCCCCCTCCTaGGAAAAGTATTCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: DNMGILWDKARGPKLCSNGTAPS*EKYSEG
Trigger: CCCCTCTGAATACTTTTCCAAGGAGGGGGCAGTTCC...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS TCA 90 bp TCTCCAGTAACAGAAGCCAGTCTCCCGAGACAGTCTCATACTCCTTaGATGTGGTCAGGACAGCCAGAATCAAGCACCCCAGGACAATCA +
Preference number: 5 (lower is better)
Translates to: SPVTEASLPRQSHTP*MWSGQPESSTPGQS
Trigger: TGATTGTCCTGGGGTGCTTGATTCTGGCTGTCCTGACCACATTCAAGGAGTATGAGACTGTCTCGGGAGACTGGCTTCTGTTACTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000521134.6
ENST00000621976.1
ENST00000638588.1
ENST00000639496.1
CDS GCA 90 bp AAGCCAGCAAACAACACACACTGTGCAGGCCTCAGCTGGGACTTTTaGTCTGTCAGTCTCTATCCTGGTGACCTTGGAGAAGTCACTTTC +
Preference number: 5 (lower is better)
Translates to: KPANNTHCAGLSWDF*SVSLYPGDLGEVTF
Trigger: GAAAGTGACTTCTCCAAGGTCACCAGGATAGAGACTGACAGAGCAAAAGTCCCAGCTGAGGCCTGCACAGTGTGTGTTGTTTGCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCGCCGTGATGAGTTCTTaGCTGTGGGCACAGATGGCT +
Preference number: 5 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAAVMSS*LWAQMA
Trigger: AGCCATCTGTGCCCACAGCAAAGAACTCATCACGGC...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGGCCTCTCCACATACGTaGTTGCTGAGGAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: HANHAEKEALCCGDMGRKASPHT*LLRKEE
Trigger: CTCCTCCTTCCTCAGCAACAACGTATGTGGAGAGGC...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCAGCACTTTCAGCCATATaGAAGGAGTGGGGAAAAGGC +
Preference number: 5 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAALSAI*KEWGKG
Trigger: GCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTGC...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGTGCATGGCCATGGGATaGTTCTTCATTCCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: QGEWADLTFESWFSMGQLCMAMG*FFIPFL
Trigger: GAGAAAGGGAATGAAGAACAATCCCATGGCCATGCA...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp ACCACGCACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTGTAAAACTGGCCACTTaGGGTCATATAGATCCCAAA +
Preference number: 5 (lower is better)
Translates to: TTHTHAFDAAIGVPAGKRVKLAT*GHIDPK
Trigger: TTTGGGATCTATATGACCCAAAGTGGCCAGTTTTAC...ACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTGCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS TCA 90 bp ATGTCAGTAACAGAAGCCAGTCTCCCGAGACAGTCTCATACTCCTTaGATGTGGTCAGGACAGCCAGAATCAAGCACCCCAGGACAATCA +
Preference number: 5 (lower is better)
Translates to: MSVTEASLPRQSHTP*MWSGQPESSTPGQS
Trigger: TGATTGTCCTGGGGTGCTTGATTCTGGCTGTCCTGACCACATTCAAGGAGTATGAGACTGTCTCGGGAGACTGGCTTCTGTTACTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS-3UTR CAA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGGTCGTAGATCAAAGTTaGGATGCGCCGGTACTTGGC +
Preference number: 5 (lower is better)
Translates to: HANHAEKEALCCGDMGRKVVDQS*DAPVLG
Trigger: GCCAAGTACCGGCGCATCCAAACTTTGATCTACGAC...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR CAA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATGGCCAGAACATTGCCTaGGTTTCCCACAGCAACCAC +
Preference number: 5 (lower is better)
Translates to: NQMSAIATVALDKTVRENGQNIA*VSHSNH
Trigger: GTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCC...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGGTGCTTCTGACGGTGTaGCTCCTGCACCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGVLLTV*LLHLEG
Trigger: GCCCTCAAGGTGCAGGAGCAACACCGTCAGAAGCAC...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGTCTCCACATACGTTGTaGCTGAGGAAGGAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQSPHTL*LRKEEL
Trigger: CAACTCCTCCTTCCTCAGCAACAACGTATGTGGAGA...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTTCCAGCTCCTCGTGGTaGACCGACATCAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: VLPRLSAYILACLTVTYGSSSSW*TDIRDR
Trigger: TCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGGA...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCAGGCCAGAGGATGGCTaGTGCTTAATATCACACCTG +
Preference number: 5 (lower is better)
Translates to: IATVALDKTVRENSSVSCRPEDG*CLISHL
Trigger: CAGGTGTGATATTAAGCACAAGCCATCCTCTGGCCT...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GGAGGTGCCCTTGGTTGGGTAATACTCCGTGACCTGCACCTGCAACCGTTCCATGCTGCATACAGACATTaGTTTAGGTCATCTGGATTA +
Preference number: 5 (lower is better)
Translates to: GGALGWVILRDLHLQPFHAAYRH*FRSSGL
Trigger: TAATCCAGATGACCTAAACAAATGTCTGTATGCAGC...ATGGAACGGTTGCAGGTGCAGGTCACGGAGTATTACCCAACCAAGGGCACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp CACACGCATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTTCATGTCTGATGCATaGAGCATTCTGGTATATTTC +
Preference number: 5 (lower is better)
Translates to: HTHAFDAAIGVPAGKRRVFMSDA*SILVYF
Trigger: GAAATATACCAGAATGCTCAATGCATCAGACATGAA...CACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCATGCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS GCA 90 bp CTTCAGAACTCTGCCAGAAAGCGTAGGCTTTCATGCGGAAGGCCGTaGGGAAACGCTCTTTATTGTTTAAGCCAACAGGCTTTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: LQNSARKRRLSCGRP*GNALYCLSQQALVL
Trigger: AAGAACCAAAGCCTGTTGGCTTAAACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTTTCTGGCAGAGTTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000521134.6
ENST00000621976.1
ENST00000638588.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AAGTGGAAATCCCCCTCCTGCTGGATAAACTGGGTGCTTTCCACGCGACACAAAAAATCGGAATACCTGTaGTCCTCCTTCTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: KWKSPSCWINWVLSTRHKKSEYL*SSFFSA
Trigger: AGCAGAGAAGAAGGAGGACAACAGGTATTCCGATTT...TTTGTGTCGCGTGGAAAGCACCCAGTTTATCCAGCAGGAGGGGGATTTCCACTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGCCTCTCCACATACGTaGTTGCTGAGGAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGASPHT*LLRKEE
Trigger: CTCCTCCTTCCTCAGCAACAACGTATGTGGAGAGGC...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGTCCAGCTCCTCGTGGTaGACCGACATCAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKESSSSW*TDIRDR
Trigger: TCTGTCCCTGATGTCGGTCAACCACGAGGAGCTGGA...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTCATTTGATGCAGCCATaGGTGTCCCCGCTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: VLPRLSAYILACLTVTYGHLMQP*VSPLVS
Trigger: GCTTACCAGCGGGGACACCAATGGCTGCATCAAATG...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTCGCACACGCATGCATTaGATGCAGCCATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: VLPRLSAYILACLTVTYGRTRMH*MQPLVS
Trigger: GGACACCAATGGCTGCATCAAATGCATGCGTGTGCG...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TTCAGAACTCTGCCAGAAAGCGTAGGCTTTCATGCGGAAGGCCGTGCGGAAACGACTCACTCTCCTTTATaGTTGGTTTCCAGTAACTCA +
Preference number: 5 (lower is better)
Translates to: FRTLPESVGFHAEGRAETTHSPL*LVSSNS
Trigger: TGAGTTACTGGAAACCAACAATAAAGGAGAGTGAGT...CGTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTTTCTGGCAGAGTTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGAACGATTGCAATTTCTaGGGCAAGTTTCAGAACGAC +
Preference number: 5 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKNDCNF*GKFQND
Trigger: GTCGTTCTGAAACTTGCCCAAGAAATTGCAATCGTT...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTTTCATTGCTAGGGTGTaGTCTGATAGCCACCATGCA +
Preference number: 5 (lower is better)
Translates to: NETQRSQCKGTPLVKLATFIARV*SDSHHA
Trigger: TGCATGGTGGCTATCAGACAACACCCTAGCAATGAA...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GACAACATGGGGATTCTCTGGGACAAGGCAAGAGGACCCAAGCTGTGTTCAAATTGCAAAGGGACACCTTaGGTAAAACTGGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: DNMGILWDKARGPKLCSNCKGTP*VKLATL
Trigger: CAAAGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCA...ATTTGAACACAGCTTGGGTCCTCTTGCCTTGTCCCAGAGAATCCCCATGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGCCAGGTACACGGGCTTaGGTTGAATATGCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: HANHAEKEALCCGDMGRKPGTRA*VEYAAL
Trigger: TAGAGCTGCATATTCAACCAAAGCCCGTGTACCTGG...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGCCCAAATCTTGCAACTaGGCCACCACCTGGACTCTT +
Preference number: 5 (lower is better)
Translates to: ETINQMSAIATVALDKTVPKSCN*ATTWTL
Trigger: AAGAGTCCAGGTGGTGGCCAAGTTGCAAGATTTGGG...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS GCA 90 bp AAAAGGCATTACCTTCAGAACTCTGCCAGAAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAACGCTCTTTATTGTTTAAGCCAACAG +
Preference number: 5 (lower is better)
Translates to: KRHYLQNSARKRRLS*GRPCGNALYCLSQQ
Trigger: CTGTTGGCTTAAACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTTTCTGGCAGAGTTCTGAAGGTAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGAGGTGGCCAGAACATaGCCTTGGTTTCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEEVART*PWFPTA
Trigger: TGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTC...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GCACTTGTGGATGATCTGCAGCCACACCAAGCCCCGAGAGCTAATGGATTCCAAAGCTTTCCTTTAGTATaGCTACCACGAGGATTAGAA +
Preference number: 5 (lower is better)
Translates to: ALVDDLQPHQAPRANGFQSFPLV*LPRGLE
Trigger: TTCTAATCCTCGTGGTAGCAATACTAAAGGAAAGCT...TTGGAATCCATTAGCTCTCGGGGCTTGGTGTGGCTGCAGATCATCCACAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp ATGGATTCATGTCACTGGGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCGAGACTTCTTGTGTTTaGGCGTGGAGGGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: MDSCHWEPPFVLQRLVFSETSCV*AWREVQ
Trigger: CTGGACCTCCCTCCACGCCAAAACACAAGAAGTCTC...GGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGTGACATGAATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGCCTCTCCACATACGTaGTTGCTGAGGAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEASPHT*LLRKEE
Trigger: CTCCTCCTTCCTCAGCAACAACGTATGTGGAGAGGC...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCATTTGATGCAGCCATaGGTGTCCCCGCTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGHLMQP*VSPLVS
Trigger: GCTTACCAGCGGGGACACCAATGGCTGCATCAAATG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCCGCACACGCATGCATTaGATGCAGCCATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIRTRMH*MQPLVS
Trigger: GGACACCAATGGCTGCATCAAATGCATGCGTGTGCG...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCAGGCCAGAGGATGGCTaGTGCTTAATATCACACCTG +
Preference number: 5 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLRPEDG*CLISHL
Trigger: CAGGTGTGATATTAAGCACAAGCCATCCTCTGGCCT...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CACATAATCATCTCTGTCCTGGGAGATGCTGAAGCCACTTGGAGACCTCTCCAGGTCATCTGGATTATCTaGATTGTCACCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: HIIISVLGDAEATWRPLQVIWII*IVTMAT
Trigger: AGTTGCCATGGTGACAATCAAGATAATCCAGATGAC...CTGGAGAGGTCTCCAAGTGGCTTCAGCATCTCCCAGGACAGAGATGATTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp TTCAGAACTCTGCCAGAAAGCGTAGGCTTTCATGCGGAAGGCCGTGCGGAAACGTTCATGTCTGATGCATaGAGCATTCTGGTATATTTC +
Preference number: 5 (lower is better)
Translates to: FRTLPESVGFHAEGRAETFMSDA*SILVYF
Trigger: GAAATATACCAGAATGCTCAATGCATCAGACATGAA...CGTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTTTCTGGCAGAGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639496.1
CDS-3UTR CAA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGGCACTTTCAGCCATATaGAAGGAGTGGGGAAAAGGC +
Preference number: 5 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVALSAI*KEWGKG
Trigger: GCCTTTTCCCCACTCCTTCAATATGGCTGAAAGTGC...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ATGCATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTCACTCTCCTTTATTGTaGGTTTCCAGTAACTCATGT +
Preference number: 5 (lower is better)
Translates to: MHLMQPLVSPLVSVGCKSHSPLL*VSSNSC
Trigger: ACATGAGTTACTGGAAACCAACAATAAAGGAGAGTG...ACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TCTCTGCTGTCCTGGTCTTATGATCCAGCAGGGAAGCTAGACTGCCTGCCTATGCACTCTCCTTTATTGTaGGTTTCCAGTAACTCATGT +
Preference number: 5 (lower is better)
Translates to: SLLSWSYDPAGKLDCLPMHSPLL*VSSNSC
Trigger: ACATGAGTTACTGGAAACCAACAATAAAGGAGAGTG...CATAGGCAGGCAGTCTAGCTTCCCTGCTGGATCATAAGACCAGGACAGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAGCAGTGTCAGCTGCACCCTGAATTTCTGCTaGCTCACTGTGAGCCATATT +
Preference number: 5 (lower is better)
Translates to: IATVALDKTVRENSSVSCTLNFC*LTVSHI
Trigger: AATATGGCTCACAGTGAGCAAGCAGAAATTCAGGGT...GCAGCTGACACTGCTATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AGGGAAGAAGTCCCCAAAGGTATGTCCGGTTTAACAGTTTCTCAAGTGGGCCAGTGTGGTCATGTCATCTaGGGTCATGTTAACCAGTTC +
Preference number: 5 (lower is better)
Translates to: REEVPKGMSGLTVSQVGQCGHVI*GHVNQF
Trigger: GAACTGGTTAACATGACCCAAGATGACATGACCACA...CTGGCCCACTTGAGAAACTGTTAAACCGGACATACCTTTGGGGACTTCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCAGTTCTGCTGAAACGATaGCAATTTCTTGGGCAAGTT +
Preference number: 5 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAVLLKR*QFLGQV
Trigger: AACTTGCCCAAGAAATTGCAATCGTTTCAGCAGAAC...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CAGGGAGAGTGGGCAGACCTGACTTTTGAGTCCTGGTTCTCTATGGGACAACTGAGTTCTGGGCATATATaGGTGCTTAATAAACCCTGT +
Preference number: 5 (lower is better)
Translates to: QGEWADLTFESWFSMGQLSSGHI*VLNKPC
Trigger: ACAGGGTTTATTAAGCACCAATATATGCCCAGAACT...CAGTTGTCCCATAGAGAACCAGGACTCAAAAGTCAGGTCTGCCCACTCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGTCTGTCTGTATAGAGTaGTTTGCAGGGATGAAATCA +
Preference number: 5 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKSVCIE*FAGMKS
Trigger: TGATTTCATCCCTGCAAACAACTCTATACAGACAGA...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CATTTGATGCAGCCATTGGTGTCCCCGCTGGTAAGCGTCGGGTGTAAGAGTAAGATGAAGTTCAAAGCATaGAATCCAAACTCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: HLMQPLVSPLVSVGCKSKMKFKA*NPNSKS
Trigger: GGACTTCGAGTTTGGATTCAATGCTTTGAACTTCAT...CTTACTCTTACACCCGACGCTTACCAGCGGGGACACCAATGGCTGCATCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GGGAGCCCTGCCAAATTCTGGCCGATTTATCCCGAGAACAATGTAAGTGGAAACAAGTTCCCCCATTCATaGCTAGGGTGTTGTCTGATA +
Preference number: 5 (lower is better)
Translates to: GSPAKFWPIYPENNVSGNKFPHS*LGCCLI
Trigger: TATCAGACAACACCCTAGCAATGAATGGGGGAACTT...GTTTCCACTTACATTGTTCTCGGGATAAATCGGCCAGAATTTGGCAGGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCCGTGGGGCTTCATGTCTGATACCTTTGACAAGGTCTaGTCTTCAGTTTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: VLQIASMSNGSPWGFMSDTFDKV*SSVSSS
Trigger: AGATGAGGAAACTGAAGACAAGACCTTGTCAAAGGT...ATCAGACATGAAGCCCCACGGGCTTCCATTTGACATGCTGGCAATCTGAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTGAGCTAGGGCCTGATTaGAGAGGAAGAAGGGGGAGA +
Preference number: 5 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVELGPD*RGRRGR
Trigger: TCTCCCCCTTCTTCCTCTCAAATCAGGCCCTAGCTC...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTATTGGCGTTGTTTCTCTaGACTGGGCGGCTCAGCGGG +
Preference number: 5 (lower is better)
Translates to: GTSLLINSIVLGYINWKLLALFL*TGRLSG
Trigger: CCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCAA...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS-3UTR CAA 90 bp AATGAGACCCAGAGATCCCAGTGCAAAGGGACACCTTTGGTAAAACTGGCCACTGTCATCTGGATTATCTaGATTGTCACCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: NETQRSQCKGTPLVKLATVIWII*IVTMAT
Trigger: AGTTGCCATGGTGACAATCAAGATAATCCAGATGAC...AGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCACTGGGATCTCTGGGTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGCCTTTGTCCTTCAGATaGCCAGCATGTCAAATGGAA +
Preference number: 5 (lower is better)
Translates to: HANHAEKEALCCGDMGRKPLSFR*PACQME
Trigger: TTCCATTTGACATGCTGGCAATCTGAAGGACAAAGG...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGACTGTGCATAGGCAACTaGAGCAGGTTTGGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRLCIGN*SRFGLP
Trigger: AGGCAAACCAAACCTGCTCAAGTTGCCTATGCACAG...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GAAACCATCAACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGTTCATTGCTAGGGTGTaGTCTGATAGCCACCATGCA +
Preference number: 5 (lower is better)
Translates to: ETINQMSAIATVALDKTVFIARV*SDSHHA
Trigger: TGCATGGTGGCTATCAGACAACACCCTAGCAATGAA...CACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTTGATGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGTCCCTGACCTCACTTTaGTGGGCAGAGGAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: QRGTSLLINSIVLGYINWSLTSL*WAEEEK
Trigger: CTTCTCTTCCTCTGCCCACAAAAGTGAGGTCAGGGA...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS TCA 90 bp AGTCTTTATTTCCACGTTGCAAGACTCCACGGTATTCTCAAGCTGTaGTGCTGTTCAGCCTTTCTTGGCACCCTCATTCTATTACCCAGA +
Preference number: 5 (lower is better)
Translates to: SLYFHVARLHGILKL*CCSAFLGTLILLPR
Trigger: TCTGGGTAATAGAATGAGGGTGCCAAGAAAGGCTGAACAGCATCACAGCTTGAGAATACCGTGGAGTCTTGCAACGTGGAAATAAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGACAGTCTCATACTCCTaGAATGTGGTCAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKETVSYS*NVVRTA
Trigger: GGCTGTCCTGACCACATTCAAGGAGTATGAGACTGT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGCAACCGTTCCATGTGTaGCATGTGCATATCCACGAG +
Preference number: 5 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGQPFHV*HVHIHE
Trigger: CTCGTGGATATGCACATGCAACACATGGAACGGTTG...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGTCTCCACATACGTTGTaGCTGAGGAAGGAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKESPHTL*LRKEEL
Trigger: CAACTCCTCCTTCCTCAGCAACAACGTATGTGGAGA...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGATTGTTTAGGGGCCAGTaGGCTCAGTTTGGAATGGTT +
Preference number: 5 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRLFRGQ*AQFGMV
Trigger: AACCATTCCAAACTGAGCCAACTGGCCCCTAAACAA...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GAGTGGGGAAAAGGCCCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCAGGCTTTGTGTGTACATaGATTGTCTCACTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: EWGKGPNNPCPLSFRLPAGFVCT*IVSLEN
Trigger: ATTTTCAAGTGAGACAATCAATGTACACACAAAGCC...TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGGGCCTTTTCCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GATTATCTTGATTGTCACCATGGCAACTATCCACAACCAGTGCCTAGGTGTGTGAACTGTTCTGAGCTTTaGGCCTCCCACAGAATGTTT +
Preference number: 5 (lower is better)
Translates to: DYLDCHHGNYPQPVPRCVNCSEL*ASHRMF
Trigger: AAACATTCTGTGGGAGGCCAAAAGCTCAGAACAGTT...CACACACCTAGGCACTGGTTGTGGATAGTTGCCATGGTGACAATCAAGATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTCAACAGTCTCATACTCCTaGAATGTGGTCAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: GVRVSELYKVCLHYKEGSTVSYS*NVVRTA
Trigger: GGCTGTCCTGACCACATTCAAGGAGTATGAGACTGT...TGACCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGACGGTTCTGGAAATTTaGCCTGTTTACACATCTGTA +
Preference number: 5 (lower is better)
Translates to: HANHAEKEALCCGDMGRKTVLEI*PVYTSV
Trigger: TACAGATGTGTAAACAGGCAAAATTTCCAGAACCGT...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGAATAACCCATGCCCTTaGTCCTTCAGATTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGNNPCP*SFRLPA
Trigger: TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATT...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAGAGCATAGTAACATGTaGGATGTTAGGCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: PGNSWVCDHFTVKLSERREHSNM*DVRQVI
Trigger: GATCACCTGCCTAACATCCAACATGTTACTATGCTC...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTCTGTGCATAGGCAACTaGAGCAGGTTTGGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: FCNLALSPTHHPDGATSGLCIGN*SRFGLP
Trigger: AGGCAAACCAAACCTGCTCAAGTTGCCTATGCACAG...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATAACGATTGCAATTTCTaGGGCAAGTTTCAGAACGAC +
Preference number: 5 (lower is better)
Translates to: NQMSAIATVALDKTVRENNDCNF*GKFQND
Trigger: GTCGTTCTGAAACTTGCCCAAGAAATTGCAATCGTT...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTTGCATGGCCATGGGATaGTTCTTCATTCCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVCMAMG*FFIPFL
Trigger: GAGAAAGGGAATGAAGAACAATCCCATGGCCATGCA...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGTGCAAAGGGACACCTTaGGTAAAACTGGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGCKGTP*VKLATL
Trigger: CAAAGTGGCCAGTTTTACCAAAGGTGTCCCTTTGCA...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CCAAATAACCCATGCCCTTTGTCCTTCAGATTGCCAGCATGTCAAATGGAAGCCATAAGATGTCCTAAGTaGAGTCCTGTCTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: PNNPCPLSFRLPACQMEAIRCPK*SPVCFF
Trigger: AAAGAAGCAGACAGGACTCAACTTAGGACATCTTAT...GGCTTCCATTTGACATGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS GCA 90 bp CAGAATCAAGCACCCCAGGACAATCAGGAACATCGTGGCGTGTTCTaGAGGCTTCATAAGGTAATGAATGCAAGAACAAGATTTTTAACA +
Preference number: 5 (lower is better)
Translates to: QNQAPQDNQEHRGVF*RLHKVMNARTRFLT
Trigger: TGTTAAAAATCTTGTTCTTGCATTCATTACCTTATGAAGCCTGCAGAACACGCCACGATGTTCCTGATTGTCCTGGGGTGCTTGATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521134.6
CDS-3UTR CAA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTGAGGTGGCCAGAACATaGCCTTGGTTTCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTEVART*PWFPTA
Trigger: TGCTGTGGGAAACCAAGGCAATGTTCTGGCCACCTC...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp CCAGGGAACTCATGGGTCTGTGATCATTTTACTGTAAAGCTGAGTGAACGTAGAGTCATCTGGATTATCTaGATTGTCACCATGGCAACT +
Preference number: 5 (lower is better)
Translates to: PGNSWVCDHFTVKLSERRVIWII*IVTMAT
Trigger: AGTTGCCATGGTGACAATCAAGATAATCCAGATGAC...TCTACGTTCACTCAGCTTTACAGTAAAATGATCACAGACCCATGAGTTCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATGCTGCATACAGACATTaGTTTAGGTCATCTGGATTA +
Preference number: 5 (lower is better)
Translates to: NQMSAIATVALDKTVRENAAYRH*FRSSGL
Trigger: TAATCCAGATGACCTAAACAAATGTCTGTATGCAGC...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAAATAACCCATGCCCTTaGTCCTTCAGATTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRNNPCP*SFRLPA
Trigger: TGCTGGCAATCTGAAGGACAAAGGGCATGGGTTATT...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCGCCAGTTGGCTCAGTTaGGAATGGTTTAATATCAGC +
Preference number: 5 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIASWLS*EWFNIS
Trigger: GCTGATATTAAACCATTCCAAACTGAGCCAACTGGC...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCAAGTTCCCCCATTCATaGCTAGGGTGTTGTCTGATA +
Preference number: 5 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIKFPHS*LGCCLI
Trigger: TATCAGACAACACCCTAGCAATGAATGGGGGAACTT...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGTTTTTGCTAGGCCTTTaGAAGACAGCAGGAATCTGG +
Preference number: 5 (lower is better)
Translates to: QRGTSLLINSIVLGYINWFLLGL*KTAGIW
Trigger: CCAGATTCCTGCTGTCTTCAAAAGGCCTAGCAAAAA...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTATCCCTGACCTCACTTTaGTGGGCAGAGGAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: GTSLLINSIVLGYINWKLSLTSL*WAEEEK
Trigger: CTTCTCTTCCTCTGCCCACAAAAGTGAGGTCAGGGA...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAGGAAGACCTATCTTTCTAAGTaGATTTTTCAGGATGGCACA +
Preference number: 5 (lower is better)
Translates to: HANHAEKEALCCGDMGRKTYLSK*IFQDGT
Trigger: TGTGCCATCCTGAAAAATCAACTTAGAAAGATAGGT...CTTCCTCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGCGGAAACGCTCTTTATaGTTTAAGCCAACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKERKRSL*FKPTGF
Trigger: AAAGCCTGTTGGCTTAAACAATAAAGAGCGTTTCCG...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp ACTGGGTGCTTTCCACGCGACACAAAGTCATATATCTTGACACAATCTCTAGGAACTCACTCTCCTTTATaGTTGGTTTCCAGTAACTCA +
Preference number: 5 (lower is better)
Translates to: TGCFPRDTKSYILTQSLGTHSPL*LVSSNS
Trigger: TGAGTTACTGGAAACCAACAATAAAGGAGAGTGAGT...TCCTAGAGATTGTGTCAAGATATATGACTTTGTGTCGCGTGGAAAGCACCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TTTCCTAATGTTAGCTCAGTAGGCAGCCCCACTGATACACAATGTGGTTTTGTTGCCATATTGTTGAGATaGTCTGTGCATAGGCAACTT +
Preference number: 5 (lower is better)
Translates to: FPNVSSVGSPTDTQCGFVAILLR*SVHRQL
Trigger: AAGTTGCCTATGCACAGACAATCTCAACAATATGGC...AACAAAACCACATTGTGTATCAGTGGGGCTGCCTACTGAGCTAACATTAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTTATCATGCTGTTCCCTaGTCTGACAAAAGGATCTTT +
Preference number: 5 (lower is better)
Translates to: VLPRLSAYILACLTVTYGYHAVP*SDKRIF
Trigger: AAAGATCCTTTTGTCAGACAAGGGAACAGCATGATA...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGTTCTGCTGAAACGATaGCAATTTCTTGGGCAAGTT +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKEVLLKR*QFLGQV
Trigger: AACTTGCCCAAGAAATTGCAATCGTTTCAGCAGAAC...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTCCTGGTAGACATAGTTaGAAGGGACCTCTGATGTTT +
Preference number: 5 (lower is better)
Translates to: FCNLALSPTHHPDGATSGPGRHS*KGPLMF
Trigger: AAACATCAGAGGTCCCTTCAAACTATGTCTACCAGG...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AAAGTCATGCAAACCATGCTGAAAAGGAAGCACTTTGTTGTGGTGACATGGGGAATGAAGTTCAAAGCATaGAATCCAAACTCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: KVMQTMLKRKHFVVVTWGMKFKA*NPNSKS
Trigger: GGACTTCGAGTTTGGATTCAATGCTTTGAACTTCAT...TCCCCATGTCACCACAACAAAGTGCTTCCTTTTCAGCATGGTTTGCATGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp AACCAAATGTCTGCCATAGCTACTGTGGCTCTTGACAAGACTGTGAGGGAGAATGGCTTTGTGTGTACATaGATTGTCTCACTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: NQMSAIATVALDKTVRENGFVCT*IVSLEN
Trigger: ATTTTCAAGTGAGACAATCAATGTACACACAAAGCC...ATTCTCCCTCACAGTCTTGTCAAGAGCCACAGTAGCTATGGCAGACATTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TTCCCTACTACTGATCAATACAAACCCAATCTCTGCTGTCCTGGTCTTATGATCGTAAAACTGGCCACTTaGGGTCATATAGATCCCAAA +
Preference number: 5 (lower is better)
Translates to: FPTTDQYKPNLCCPGLMIVKLAT*GHIDPK
Trigger: TTTGGGATCTATATGACCCAAAGTGGCCAGTTTTAC...GATCATAAGACCAGGACAGCAGAGATTGGGTTTGTATTGATCAGTAGTAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GTGCTTCCCAGGCTGTCTGCTTACATTTTAGCTTGTCTTACGGTTACATATGGTATAAGATGTCCTAAGTaGAGTCCTGTCTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: VLPRLSAYILACLTVTYGIRCPK*SPVCFF
Trigger: AAAGAAGCAGACAGGACTCAACTTAGGACATCTTAT...ACCATATGTAACCGTAAGACAAGCTAAAATGTAAGCAGACAGCCTGGGAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGGGGAATGAAGATGTTCATTaGAGCCAACAGAGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: SGVRVSELYKVCLHYKEGNEDVH*SQQRPV
Trigger: AACAGGCCTCTGTTGGCTCAAATGAACATCTTCATT...CCCCTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGAAACTGTTCTGAGCTTTaGGCCTCCCACAGAATGTTT +
Preference number: 5 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRNCSEL*ASHRMF
Trigger: AAACATTCTGTGGGAGGCCAAAAGCTCAGAACAGTT...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GGTATATTTCCCATCTCAGACTTCAAGGTCTACACCCATCCATTTATGGGGCTCACCTATCTTTCTAAGTaGATTTTTCAGGATGGCACA +
Preference number: 5 (lower is better)
Translates to: GIFPISDFKVYTHPFMGLTYLSK*IFQDGT
Trigger: TGTGCCATCCTGAAAAATCAACTTAGAAAGATAGGT...GAGCCCCATAAATGGATGGGTGTAGACCTTGAAGTCTGAGATGGGAAATATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS TCA 90 bp TTCAACTTTTACAAACTTCCCCATCATGCTTTGGTCTTCGATTTCTaGTGTGGATGGTCTGGCTACATATGGTTCATTCCCTTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: FNFYKLPHHALVFDF*CGWSGYIWFIPFLR
Trigger: TCTCAGAAAGGGAATGAACCATATGTAGCCAGACCATCCACATCAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTGTAAAAGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519445.5
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGAGCTTTCCTTTAGTATaGCTACCACGAGGATTAGAA +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKESFPLV*LPRGLE
Trigger: TTCTAATCCTCGTGGTAGCAATACTAAAGGAAAGCT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000521134.6
ENST00000621976.1
CDS-3UTR CAA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAGCTTTCCTTTAGTATaGCTACCACGAGGATTAGAA +
Preference number: 5 (lower is better)
Translates to: QRGTSLLINSIVLGYINWSFPLV*LPRGLE
Trigger: TTCTAATCCTCGTGGTAGCAATACTAAAGGAAAGCT...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp CAGAGGGGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGACTCACTCTCCTTTATaGTTGGTTTCCAGTAACTCA +
Preference number: 5 (lower is better)
Translates to: QRGTSLLINSIVLGYINWTHSPL*LVSSNS
Trigger: TGAGTTACTGGAAACCAACAATAAAGGAGAGTGAGT...CCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCCCCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp GCGTCGGGTGTAAGAGTAAGTGAACTATACAAAGTCTGTCTACATTACAAGGAGAGTTCTGGGCATATATaGGTGCTTAATAAACCCTGT +
Preference number: 5 (lower is better)
Translates to: ASGVRVSELYKVCLHYKESSGHI*VLNKPC
Trigger: ACAGGGTTTATTAAGCACCAATATATGCCCAGAACT...CTCCTTGTAATGTAGACAGACTTTGTATAGTTCACTTACTCTTACACCCGACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TCTTTTTCATGTTCTGGGCTCAATCGTGATGCTTTGATTTCACTTGGTATTTTACCAGGTACACGGGCTTaGGTTGAATATGCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: SFSCSGLNRDALISLGILPGTRA*VEYAAL
Trigger: TAGAGCTGCATATTCAACCAAAGCCCGTGTACCTGG...TAAAATACCAAGTGAAATCAAAGCATCACGATTGAGCCCAGAACATGAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GGAACCTCCATTTGTTCTTCAAAGACTGGTGTTTTCCATCACTGCTACATTAGACACTCTCCTTTATTGTaGGTTTCCAGTAACTCATGT +
Preference number: 5 (lower is better)
Translates to: GTSICSSKTGVFHHCYIRHSPLL*VSSNSC
Trigger: ACATGAGTTACTGGAAACCAACAATAAAGGAGAGTG...TCTAATGTAGCAGTGATGGAAAACACCAGTCTTTGAAGAACAAATGGAGGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTAACCCTGAATTTCTGCTaGCTCACTGTGAGCCATATT +
Preference number: 5 (lower is better)
Translates to: GTSLLINSIVLGYINWKLTLNFC*LTVSHI
Trigger: AATATGGCTCACAGTGAGCAAGCAGAAATTCAGGGT...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TTTTGCAATTTGGCTTTATCTCCTACACATCATCCAGATGGTGCAACATCTGGTTATCATGCTGTTCCCTaGTCTGACAAAAGGATCTTT +
Preference number: 5 (lower is better)
Translates to: FCNLALSPTHHPDGATSGYHAVP*SDKRIF
Trigger: AAAGATCCTTTTGTCAGACAAGGGAACAGCATGATA...ACCAGATGTTGCACCATCTGGATGATGTGTAGGAGATAAAGCCAAATTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp GGCACTTCACTTCTGATAAATTCCATTGTCCTTGGCTACATAAATTGGAAACTAACTGGGAACCTCCATTaGTTCTTCAAAGACTGGTGT +
Preference number: 5 (lower is better)
Translates to: GTSLLINSIVLGYINWKLTGNLH*FFKDWC
Trigger: ACACCAGTCTTTGAAGAACAAATGGAGGTTCCCAGT...TAGTTTCCAATTTATGTAGCCAAGGACAATGGAATTTATCAGAAGTGAAGTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000621976.1
CDS-3UTR CAA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTGAGCATAGTAACATGTaGGATGTTAGGCAGGTGATC +
Preference number: 5 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTEHSNM*DVRQVI
Trigger: GATCACCTGCCTAACATCCAACATGTTACTATGCTC...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS-3UTR CAA 90 bp TCATTTATAAAAGGAAGTCCTTGGACTAGAAAATTTCTGTGTGCCTTCTTGACTCGGAAACGCTCTTTATaGTTTAAGCCAACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: SFIKGSPWTRKFLCAFLTRKRSL*FKPTGF
Trigger: AAAGCCTGTTGGCTTAAACAATAAAGAGCGTTTCCG...AGTCAAGAAGGCACACAGAAATTTTCTAGTCCAAGGACTTCCTTTTATAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388996.10
ENST00000621976.1
ENST00000639496.1
CDS CAA 72 bp TCGCGGCCGCCGCCCTCCAGCAGCAGGGTCCCGTCTTaGTCGGCTCCGGCCCCGAGCGCCAAGGTGACTTGC +
Preference number: 6 (lower is better)
Translates to: SRPPPSSSRVPS*SAPAPSAKVTC
Trigger: GCAAGTCACCTTGGCGCTCGGGGCCGGAGCCGACAAAGACGGGACCCTGCTGCTGGAGGGCGGCGGCCGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS CAA 90 bp TGCCCCTCGTCGCGGCCGCCGCCCTCCAGCAGCAGGGTCCCGTCTTaGTCGGCTCCGGCCCCGAGCGCCAAGGTGACTTGCTCCACGTCG +
Preference number: 6 (lower is better)
Translates to: CPSSRPPPSSSRVPS*SAPAPSAKVTCSTS
Trigger: CGACGTGGAGCAAGTCACCTTGGCGCTCGGGGCCGGAGCCGACAAAGACGGGACCCTGCTGCTGGAGGGCGGCGGCCGCGACGAGGGGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS CAA 90 bp CAGGGTCCCGTCTTTGTCGGCTCCGGCCCCGAGCGCCAAGGTGACTaGCTCCACGTCGCCGGGCGCCAGCCCCACTTTCCGCTCCTCGTC +
Preference number: 6 (lower is better)
Translates to: QGPVFVGSGPERQGD*LHVAGRQPHFPLLV
Trigger: GACGAGGAGCGGAAAGTGGGGCTGGCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCTCGGGGCCGGAGCCGACAAAGACGGGACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS TCA 72 bp TCCCGTCTTTGTCGGCTCCGGCCCCGAGCGCCAAGGTaGCTTGCTCCACGTCGCCGGGCGCCAGCCCCACTT +
Preference number: 6 (lower is better)
Translates to: SRLCRLRPRAPR*LAPRRRAPAPL
Trigger: AAGTGGGGCTGGCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCTCGGGGCCGGAGCCGACAAAGACGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS GCA 72 bp TCTTTGTCGGCTCCGGCCCCGAGCGCCAAGGTGACTTaGTCCACGTCGCCGGGCGCCAGCCCCACTTTCCGC +
Preference number: 6 (lower is better)
Translates to: SLSAPAPSAKVT*STSPGASPTFR
Trigger: GCGGAAAGTGGGGCTGGCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCTCGGGGCCGGAGCCGACAAAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS CAA 72 bp GTCTTTGTCGGCTCCGGCCCCGAGCGCCAAGGTGACTaGCTCCACGTCGCCGGGCGCCAGCCCCACTTTCCG +
Preference number: 6 (lower is better)
Translates to: VFVGSGPERQGD*LHVAGRQPHFP
Trigger: CGGAAAGTGGGGCTGGCGCCCGGCGACGTGGAGCAAGTCACCTTGGCGCTCGGGGCCGGAGCCGACAAAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388996.10
ENST00000519445.5
CDS GCA 72 bp GCCCAAGACAGCATCGCAGTTTATTTACAAGCCCGGTaGCAGCCGCCCTCCCGCCCGCCAGCCACACGCGCC +
Preference number: 6 (lower is better)
Translates to: AQDSIAVYLQAR*QPPSRPPATRA
Trigger: GGCGCGTGTGGCTGGCGGGCGGGAGGGCGGCTGGCACCGGGCTTGTAAATAAACTGCGATGCTGTCTTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388996.10
CDS CCA 72 bp TTGGATGCGCCGGTACTTGGCGTTGTTTCTCTTGACTaGGCGGCTCAGCGGGGTCTTGGCCAGGAGCCCGAT +
Preference number: 6 (lower is better)
Translates to: LDAPVLGVVSLD*AAQRGLGQEPD
Trigger: ATCGGGCTCCTGGCCAAGACCCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCAAGTACCGGCGCATCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000639358.1
CDS CCA 72 bp CCTGTCTTCCGCCATGGGGTCACCTGTCCCGGCATCTaGGAGGGAGACACACATATGAACGGCAGGCCACAG +
Preference number: 6 (lower is better)
Translates to: PVFRHGVTCPGI*EGDTHMNGRPQ
Trigger: CTGTGGCCTGCCGTTCATATGTGTGTCTCCCTCCCAGATGCCGGGACAGGTGACCCCATGGCGGAAGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CCA 72 bp TGGGGAAGTCATTCCCATAGCCCCTGTCTTCCGCCATaGGGTCACCTGTCCCGGCATCTGGGAGGGAGACAC +
Preference number: 6 (lower is better)
Translates to: WGSHSHSPCLPP*GHLSRHLGGRH
Trigger: GTGTCTCCCTCCCAGATGCCGGGACAGGTGACCCCATGGCGGAAGACAGGGGCTATGGGAATGACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS TCA 72 bp AAGTTTGGATGCGCCGGTACTTGGCGTTGTTTCTCTTaGCTGGGCGGCTCAGCGGGGTCTTGGCCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: KFGCAGTWRCFS*LGGSAGSWPGA
Trigger: GGCTCCTGGCCAAGACCCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCAAGTACCGGCGCATCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000639358.1
CDS CAA 72 bp AAAGTTTGGATGCGCCGGTACTTGGCGTTGTTTCTCTaGACTGGGCGGCTCAGCGGGGTCTTGGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: KVWMRRYLALFL*TGRLSGVLARS
Trigger: GCTCCTGGCCAAGACCCCGCTGAGCCGCCCAGTCAAGAGAAACAACGCCAAGTACCGGCGCATCCAAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000639358.1
CDS GCA 72 bp GGCCATGGCTCCTACAGCCTCCAGAGGGCGCTTTTCTaGCACTCTTCCCGTGCCCTGGTCTCTAAATTGCTT +
Preference number: 6 (lower is better)
Translates to: GHGSYSLQRALF*HSSRALVSKLL
Trigger: AAGCAATTTAGAGACCAGGGCACGGGAAGAGTGGCAGAAAAGCGCCCTCTGGAGGCTGTAGGAGCCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CCA 72 bp ACATATGAACGGCAGGCCACAGACCTGGAAAAGGCTTaGGGACCCCACTGTTCGGTCAAAGCCTTCCACGCC +
Preference number: 6 (lower is better)
Translates to: TYERQATDLEKA*GPHCSVKAFHA
Trigger: GGCGTGGAAGGCTTTGACCGAACAGTGGGGTCCCCAAGCCTTTTCCAGGTCTGTGGCCTGCCGTTCATATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CAA 72 bp GCCCCGCGGTCTCTCCAGGGCGTCGTAGATCAAAGTTaGGATGCGCCGGTACTTGGCGTTGTTTCTCTTGAC +
Preference number: 6 (lower is better)
Translates to: APRSLQGVVDQS*DAPVLGVVSLD
Trigger: GTCAAGAGAAACAACGCCAAGTACCGGCGCATCCAAACTTTGATCTACGACGCCCTGGAGAGACCGCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000639358.1
CDS CAA 90 bp CAGAGGGCGCTTTTCTGCCACTCTTCCCGTGCCCTGGTCTCTAAATaGCTTTGCACCTGGCACCGCCCCATCCTTCAAGTTGACCTCCAT +
Preference number: 6 (lower is better)
Translates to: QRALFCHSSRALVSK*LCTWHRPILQVDLH
Trigger: ATGGAGGTCAACTTGAAGGATGGGGCGGTGCCAGGTGCAAAGCAATTTAGAGACCAGGGCACGGGAAGAGTGGCAGAAAAGCGCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS GCA 72 bp TGCCACTCTTCCCGTGCCCTGGTCTCTAAATTGCTTTaGACCTGGCACCGCCCCATCCTTCAAGTTGACCTC +
Preference number: 6 (lower is better)
Translates to: CHSSRALVSKLL*TWHRPILQVDL
Trigger: GAGGTCAACTTGAAGGATGGGGCGGTGCCAGGTGCAAAGCAATTTAGAGACCAGGGCACGGGAAGAGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CAA 90 bp GGCGGACCCTTAGAAACCAAGGTGACAGGTTTCCAGGCTCCTAACTaGGGAGCCTGCAGCCCTAGACTCCTGGGAATACATCACAATGCC +
Preference number: 6 (lower is better)
Translates to: GGPLETKVTGFQAPN*GACSPRLLGIHHNA
Trigger: GGCATTGTGATGTATTCCCAGGAGTCTAGGGCTGCAGGCTCCCAAGTTAGGAGCCTGGAAACCTGTCACCTTGGTTTCTAAGGGTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS GCA 72 bp AGGACAATCAGGAACCTGAAACACGCTTCCTCCCTCTaGTTCCTCATTGAGGTCCTCCATGCCTGTGCCACC +
Preference number: 6 (lower is better)
Translates to: RTIRNLKHASSL*FLIEVLHACAT
Trigger: GGTGGCACAGGCATGGAGGACCTCAATGAGGAAGCAGAGGGAGGAAGCGTGTTTCAGGTTCCTGATTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638588.1
ENST00000639496.1
CDS CCA 72 bp GCCCAAGGGACAGGAGGAGTTAGGGAAGCAAGAAGTTaGCTTGTCGAGGGAAGGGAGAGAGTTACCTTGTGG +
Preference number: 6 (lower is better)
Translates to: AQGTGGVREARS*LVEGRERVTLW
Trigger: CCACAAGGTAACTCTCTCCCTTCCCTCGACAAGCCAACTTCTTGCTTCCCTAACTCCTCCTGTCCCTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CAA 90 bp GCCTCAGCTGGGACTTTTGCTCTGTCAGTCTCTATCCTGGTGACCTaGGAGAAGTCACTTTCTGAGCCGCACACATCAGAGGCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: ASAGTFALSVSILVT*EKSLSEPHTSEALE
Trigger: CTCCAAGGCCTCTGATGTGTGCGGCTCAGAAAGTGACTTCTCCAAGGTCACCAGGATAGAGACTGACAGAGCAAAAGTCCCAGCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS TCA 72 bp ACAATGAGGATTGAGGGCCTGGGTGGGCTCAGACACTaGGGAAACAGGCTTTTCTGCATGTCCTCCCTTTGC +
Preference number: 6 (lower is better)
Translates to: TMRIEGLGGLRH*GNRLFCMSSLC
Trigger: GCAAAGGGAGGACATGCAGAAAAGCCTGTTTCCTCAGTGTCTGAGCCCACCCAGGCCCTCAATCCTCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CCA 72 bp TCTTCCCGTGCCCTGGTCTCTAAATTGCTTTGCACCTaGCACCGCCCCATCCTTCAAGTTGACCTCCATAAC +
Preference number: 6 (lower is better)
Translates to: SSRALVSKLLCT*HRPILQVDLHN
Trigger: GTTATGGAGGTCAACTTGAAGGATGGGGCGGTGCCAGGTGCAAAGCAATTTAGAGACCAGGGCACGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS TCA 72 bp ACAGAAGCCAGTCTCCCGAGACAGTCTCATACTCCTTaGATGTGGTCAGGACAGCCAGAATCAAGCACCCCA +
Preference number: 6 (lower is better)
Translates to: TEASLPRQSHTP*MWSGQPESSTP
Trigger: TGGGGTGCTTGATTCTGGCTGTCCTGACCACATTCAAGGAGTATGAGACTGTCTCGGGAGACTGGCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000521134.6
ENST00000621976.1
ENST00000638588.1
ENST00000639358.1
ENST00000639496.1
CDS TCA 72 bp TACCCAGAAGTCCAAGTCAAAAGTGTGCGCAGCTCATaGCTGGTAGTGAGGGAAAAGGCTAGCAGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: YPEVQVKSVRSS*LVVREKASREE
Trigger: CTCCTCCCTGCTAGCCTTTTCCCTCACTACCAGTCATGAGCTGCGCACACTTTTGACTTGGACTTCTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CCA 72 bp AAGCCAGCAAACAACACACACTGTGCAGGCCTCAGCTaGGACTTTTGCTCTGTCAGTCTCTATCCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: KPANNTHCAGLS*DFCSVSLYPGD
Trigger: GTCACCAGGATAGAGACTGACAGAGCAAAAGTCCCAGCTGAGGCCTGCACAGTGTGTGTTGTTTGCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CAA 72 bp AACAGAAGCCAGTCTCCCGAGACAGTCTCATACTCCTaGAATGTGGTCAGGACAGCCAGAATCAAGCACCCC +
Preference number: 6 (lower is better)
Translates to: NRSQSPETVSYS*NVVRTARIKHP
Trigger: GGGGTGCTTGATTCTGGCTGTCCTGACCACATTCAAGGAGTATGAGACTGTCTCGGGAGACTGGCTTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000521134.6
ENST00000621976.1
ENST00000638588.1
ENST00000639358.1
ENST00000639496.1
CDS CAA 90 bp GTCTCCAGTAACAGAAGCCAGTCTCCCGAGACAGTCTCATACTCCTaGAATGTGGTCAGGACAGCCAGAATCAAGCACCCCAGGACAATC +
Preference number: 6 (lower is better)
Translates to: VSSNRSQSPETVSYS*NVVRTARIKHPRTI
Trigger: GATTGTCCTGGGGTGCTTGATTCTGGCTGTCCTGACCACATTCAAGGAGTATGAGACTGTCTCGGGAGACTGGCTTCTGTTACTGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000521134.6
ENST00000621976.1
ENST00000638588.1
ENST00000639496.1
CDS CAA 90 bp GATGTCAGTAACAGAAGCCAGTCTCCCGAGACAGTCTCATACTCCTaGAATGTGGTCAGGACAGCCAGAATCAAGCACCCCAGGACAATC +
Preference number: 6 (lower is better)
Translates to: DVSNRSQSPETVSYS*NVVRTARIKHPRTI
Trigger: GATTGTCCTGGGGTGCTTGATTCTGGCTGTCCTGACCACATTCAAGGAGTATGAGACTGTCTCGGGAGACTGGCTTCTGTTACTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS CCA 72 bp GGCCAGAACATTGCCTTGGTTTCCCACAGCAACCACTaGCACAGAGGCAATCAGCACAAAGATGTCCAACAT +
Preference number: 6 (lower is better)
Translates to: GQNIALVSHSNH*HRGNQHKDVQH
Trigger: ATGTTGGACATCTTTGTGCTGATTGCCTCTGTGCCAGTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000521134.6
ENST00000621976.1
ENST00000638588.1
ENST00000639496.1
CDS CCA 72 bp GGCCAGAACATTGCCTTGGTTTCCCACAGCAACCACTaGCACAGAGGCAATCAGCACAAAGATGTCAGTAAC +
Preference number: 6 (lower is better)
Translates to: GQNIALVSHSNH*HRGNQHKDVSN
Trigger: GTTACTGACATCTTTGTGCTGATTGCCTCTGTGCCAGTGGTTGCTGTGGGAAACCAAGGCAATGTTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639358.1
CDS CAA 72 bp TTAGAAACCAAGGTGACAGGTTTCCAGGCTCCTAACTaGGGAGCCTGCAGCCCTAGACTCCTGGGAATACAT +
Preference number: 6 (lower is better)
Translates to: LETKVTGFQAPN*GACSPRLLGIH
Trigger: ATGTATTCCCAGGAGTCTAGGGCTGCAGGCTCCCAAGTTAGGAGCCTGGAAACCTGTCACCTTGGTTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CAA 72 bp GGGACTTTTGCTCTGTCAGTCTCTATCCTGGTGACCTaGGAGAAGTCACTTTCTGAGCCGCACACATCAGAG +
Preference number: 6 (lower is better)
Translates to: GTFALSVSILVT*EKSLSEPHTSE
Trigger: CTCTGATGTGTGCGGCTCAGAAAGTGACTTCTCCAAGGTCACCAGGATAGAGACTGACAGAGCAAAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CAA 90 bp TCCACGCCTCTGGATGTGTCAATCCCCAGAGTCTTTATTTCCACGTaGCAAGACTCCACGGTATTCTCAAGCTGTGATGCTGTTCAGCCT +
Preference number: 6 (lower is better)
Translates to: STPLDVSIPRVFIST*QDSTVFSSCDAVQP
Trigger: AGGCTGAACAGCATCACAGCTTGAGAATACCGTGGAGTCTTGCAACGTGGAAATAAAGACTCTGGGGATTGACACATCCAGAGGCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS TCA 72 bp TTCCACGTTGCAAGACTCCACGGTATTCTCAAGCTGTaGTGCTGTTCAGCCTTTCTTGGCACCCTCATTCTA +
Preference number: 6 (lower is better)
Translates to: FHVARLHGILKL*CCSAFLGTLIL
Trigger: TAGAATGAGGGTGCCAAGAAAGGCTGAACAGCATCACAGCTTGAGAATACCGTGGAGTCTTGCAACGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS GCA 72 bp TACCTTCAGAACTCTGCCAGAAAGCGTAGGCTTTCATaGGGAAGGCCGTGCGGAAACGCTCTTTATTGTTTA +
Preference number: 6 (lower is better)
Translates to: YLQNSARKRRLS*GRPCGNALYCL
Trigger: TAAACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGAAAGCCTACGCTTTCTGGCAGAGTTCTGAAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS GCA 72 bp GCACCCCAGGACAATCAGGAACATCGTGGCGTGTTCTaGAGGCTTCATAAGGTAATGAATGCAAGAACAAGA +
Preference number: 6 (lower is better)
Translates to: APQDNQEHRGVF*RLHKVMNARTR
Trigger: TCTTGTTCTTGCATTCATTACCTTATGAAGCCTGCAGAACACGCCACGATGTTCCTGATTGTCCTGGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521134.6
CDS CAA 90 bp CAAGACTCCACGGTATTCTCAAGCTGTGATGCTGTTCAGCCTTTCTaGGCACCCTCATTCTATTACCCAGAAGTCCAAGTCAAAAGTGTG +
Preference number: 6 (lower is better)
Translates to: QDSTVFSSCDAVQPF*APSFYYPEVQVKSV
Trigger: CACACTTTTGACTTGGACTTCTGGGTAATAGAATGAGGGTGCCAAGAAAGGCTGAACAGCATCACAGCTTGAGAATACCGTGGAGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CCA 72 bp CGGTATTCTCAAGCTGTGATGCTGTTCAGCCTTTCTTaGCACCCTCATTCTATTACCCAGAAGTCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: RYSQAVMLFSLS*HPHSITQKSKS
Trigger: TGACTTGGACTTCTGGGTAATAGAATGAGGGTGCCAAGAAAGGCTGAACAGCATCACAGCTTGAGAATACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CAA 72 bp GCTTTCATGCGGAAGGCCGTGCGGAAACGCTCTTTATaGTTTAAGCCAACAGGCTTTGGTTCTTTAGAAGGA +
Preference number: 6 (lower is better)
Translates to: AFMRKAVRKRSL*FKPTGFGSLEG
Trigger: TCCTTCTAAAGAACCAAAGCCTGTTGGCTTAAACAATAAAGAGCGTTTCCGCACGGCCTTCCGCATGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000521134.6
ENST00000621976.1
ENST00000638588.1
ENST00000639496.1
CDS CAA 72 bp ACGGTATTCTCAAGCTGTGATGCTGTTCAGCCTTTCTaGGCACCCTCATTCTATTACCCAGAAGTCCAAGTC +
Preference number: 6 (lower is better)
Translates to: TVFSSCDAVQPF*APSFYYPEVQV
Trigger: GACTTGGACTTCTGGGTAATAGAATGAGGGTGCCAAGAAAGGCTGAACAGCATCACAGCTTGAGAATACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CAA 72 bp CTGGATGTGTCAATCCCCAGAGTCTTTATTTCCACGTaGCAAGACTCCACGGTATTCTCAAGCTGTGATGCT +
Preference number: 6 (lower is better)
Translates to: LDVSIPRVFIST*QDSTVFSSCDA
Trigger: AGCATCACAGCTTGAGAATACCGTGGAGTCTTGCAACGTGGAAATAAAGACTCTGGGGATTGACACATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519589.1
CDS CAA 90 bp TCTATGGCATCTACATTCAGAGGGGTAAATAGCTTTCCTTTAGTATaGCTACCACGAGGATTAGAAAGGCGAACCCGATCCAAGAGACCC +
Preference number: 6 (lower is better)
Translates to: SMASTFRGVNSFPLV*LPRGLERRTRSKRP
Trigger: GGGTCTCTTGGATCGGGTTCGCCTTTCTAATCCTCGTGGTAGCAATACTAAAGGAAAGCTATTTACCCCTCTGAATGTAGATGCCATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000521134.6
ENST00000621976.1
ENST00000638588.1
CDS TCA 72 bp TACAAACTTCCCCATCATGCTTTGGTCTTCGATTTCTaGTGTGGATGGTCTGGCTACATATGGTTCATTCCC +
Preference number: 6 (lower is better)
Translates to: YKLPHHALVFDF*CGWSGYIWFIP
Trigger: GGGAATGAACCATATGTAGCCAGACCATCCACATCAGAAATCGAAGACCAAAGCATGATGGGGAAGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519445.5
CDS CAA 72 bp TCTACATTCAGAGGGGTAAATAGCTTTCCTTTAGTATaGCTACCACGAGGATTAGAAAGGCGAACCCGATCC +
Preference number: 6 (lower is better)
Translates to: STFRGVNSFPLV*LPRGLERRTRS
Trigger: GGATCGGGTTCGCCTTTCTAATCCTCGTGGTAGCAATACTAAAGGAAAGCTATTTACCCCTCTGAATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388996.10
ENST00000519445.5
ENST00000519589.1
ENST00000521134.6
ENST00000621976.1
ENST00000638588.1