Pregenerated sensors for KCNQ1DN (Homo sapiens)
Ensembl gene IDs: ENSG00000237941Ensembl transcript IDs: ENST00000441418.2, ENST00000610870.2
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCCGGGGCCTGGGACCAGGCCGGCTGGGTGTGGCTTCACCAGGATaGGCCGGGTTTCAGCCTCTGTTCTGGGGGCTGCATAAGTCAACT | + |
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Preference number: 5 (lower is better) Translates to: ARGLGPGRLGVASPG*AGFQPLFWGLHKST Trigger: AGTTGACTTATGCAGCCCCCAGAACAGAGGCTGAAACCCGGCGCATCCTGGTGAAGCCACACCCAGCCGGCCTGGTCCCAGGCCCCGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS TCA 90 bp | GCTGGGCATGCACGCAAGTGTCCAGAAAGCGGGAATCCAGGGCCCTaGGCCTGCGTCCCTGCCGACTCAGCCCCGGCTCTGAAAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AGHARKCPESGNPGP*ACVPADSAPALKGK Trigger: CTTCCCTTTCAGAGCCGGGGCTGAGTCGGCAGGGACGCAGGCTCAGGGCCCTGGATTCCCGCTTTCTGGACACTTGCGTGCATGCCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 90 bp | CAAGTGTCCAGAAAGCGGGAATCCAGGGCCCTGAGCCTGCGTCCCTaGCGACTCAGCCCCGGCTCTGAAAGGGAAGCAGATGGGAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: QVSRKRESRALSLRP*RLSPGSEREADGSG Trigger: TCCACTCCCATCTGCTTCCCTTTCAGAGCCGGGGCTGAGTCGGCAGGGACGCAGGCTCAGGGCCCTGGATTCCCGCTTTCTGGACACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 90 bp | GTGGCATGGGGAGTTGGTGCTCGGCAGTGGGTCCTGACCACTTCCTaGCCATCACAGCCACGGCTTCTCCCCTCTGAGGAGGGATTGCTT | + |
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Preference number: 5 (lower is better) Translates to: VAWGVGARQWVLTTS*PSQPRLLPSEEGLL Trigger: AAGCAATCCCTCCTCAGAGGGGAGAAGCCGTGGCTGTGATGGGCAGGAAGTGGTCAGGACCCACTGCCGAGCACCAACTCCCCATGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 90 bp | GACACTTCTCCTTGCCTCTTGCCTCTTGGGAAGCCTTTGATGGGCTaGACCCTGACGCGACCCCTTTCCAGGAGTCCAGGCGCACCCCTG | + |
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Preference number: 5 (lower is better) Translates to: DTSPCLLPLGKPLMG*TLTRPLSRSPGAPL Trigger: CAGGGGTGCGCCTGGACTCCTGGAAAGGGGTCGCGTCAGGGTGCAGCCCATCAAAGGCTTCCCAAGAGGCAAGAGGCAAGGAGAAGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 90 bp | TGGCTTCACCAGGATGCGCCGGGTTTCAGCCTCTGTTCTGGGGGCTaGATAAGTCAACTCGGGGCGAGTCCCAAACTGTGCTGGGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: WLHQDAPGFSLCSGG*ISQLGASPKLCWAS Trigger: CGAAGCCCAGCACAGTTTGGGACTCGCCCCGAGTTGACTTATGCAGCCCCCAGAACAGAGGCTGAAACCCGGCGCATCCTGGTGAAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 90 bp | CTGAGGAGGGATTGCTTTCTCAGAAGGGCGAGCTGGTGCTGGGCATaGACGCAAGTGTCCAGAAAGCGGGAATCCAGGGCCCTGAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: LRRDCFLRRASWCWA*TQVSRKRESRALSL Trigger: CAGGCTCAGGGCCCTGGATTCCCGCTTTCTGGACACTTGCGTGCATGCCCAGCACCAGCTCGCCCTTCTGAGAAAGCAATCCCTCCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 90 bp | CTTCCTGCCCATCACAGCCACGGCTTCTCCCCTCTGAGGAGGGATTaGTTTCTCAGAAGGGCGAGCTGGTGCTGGGCATGCACGCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: LPAHHSHGFSPLRRD*FLRRASWCWACTQV Trigger: CACTTGCGTGCATGCCCAGCACCAGCTCGCCCTTCTGAGAAAGCAATCCCTCCTCAGAGGGGAGAAGCCGTGGCTGTGATGGGCAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 90 bp | CTGGGTGTGGCTTCACCAGGATGCGCCGGGTTTCAGCCTCTGTTCTaGGGGCTGCATAAGTCAACTCGGGGCGAGTCCCAAACTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LGVASPGCAGFQPLF*GLHKSTRGESQTVL Trigger: CAGCACAGTTTGGGACTCGCCCCGAGTTGACTTATGCAGCCCCCAGAACAGAGGCTGAAACCCGGCGCATCCTGGTGAAGCCACACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 90 bp | TCCCCTCTGAGGAGGGATTGCTTTCTCAGAAGGGCGAGCTGGTGCTaGGCATGCACGCAAGTGTCCAGAAAGCGGGAATCCAGGGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: SPLRRDCFLRRASWC*ACTQVSRKRESRAL Trigger: CAGGGCCCTGGATTCCCGCTTTCTGGACACTTGCGTGCATGCCCAGCACCAGCTCGCCCTTCTGAGAAAGCAATCCCTCCTCAGAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 90 bp | TTCTCCCCTCTGAGGAGGGATTGCTTTCTCAGAAGGGCGAGCTGGTaGTGGGCATGCACGCAAGTGTCCAGAAAGCGGGAATCCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FSPLRRDCFLRRASW*WACTQVSRKRESRA Trigger: GGCCCTGGATTCCCGCTTTCTGGACACTTGCGTGCATGCCCAGCACCAGCTCGCCCTTCTGAGAAAGCAATCCCTCCTCAGAGGGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 90 bp | GGCTTCTCCCCTCTGAGGAGGGATTGCTTTCTCAGAAGGGCGAGCTaGTGCTGGGCATGCACGCAAGTGTCCAGAAAGCGGGAATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GFSPLRRDCFLRRAS*CWACTQVSRKRESR Trigger: CCTGGATTCCCGCTTTCTGGACACTTGCGTGCATGCCCAGCACCAGCTCGCCCTTCTGAGAAAGCAATCCCTCCTCAGAGGGGAGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 90 bp | CGCTACAAACAGCAGCAACATCCTTGGTGGAAAAGTTCAAGAATCTaGTCCAAAGGCAGCCTGAGTGAGCCAGCCGGGACCAGAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: RYKQQQHPWWKSSRI*SKGSLSEPAGTRTR Trigger: CCTGGTTCTGGTCCCGGCTGGCTCACTCAGGCTGCCTTTGGACCAGATTCTTGAACTTTTCCACCAAGGATGTTGCTGCTGTTTGTAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 90 bp | CAGCGATTTTCCAGGATCCGACGCTACAAACAGCAGCAACATCCTTaGTGGAAAAGTTCAAGAATCTGGTCCAAAGGCAGCCTGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: QRFSRIRRYKQQQHP*WKSSRIWSKGSLSE Trigger: CTCACTCAGGCTGCCTTTGGACCAGATTCTTGAACTTTTCCACCAAGGATGTTGCTGCTGTTTGTAGCGTCGGATCCTGGAAAATCGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS TCA 72 bp | GCACGCAAGTGTCCAGAAAGCGGGAATCCAGGGCCCTaGGCCTGCGTCCCTGCCGACTCAGCCCCGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ARKCPESGNPGP*ACVPADSAPAL Trigger: CAGAGCCGGGGCTGAGTCGGCAGGGACGCAGGCTCAGGGCCCTGGATTCCCGCTTTCTGGACACTTGCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 72 bp | AGAAAGCGGGAATCCAGGGCCCTGAGCCTGCGTCCCTaGCGACTCAGCCCCGGCTCTGAAAGGGAAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RKRESRALSLRP*RLSPGSEREAD Trigger: ATCTGCTTCCCTTTCAGAGCCGGGGCTGAGTCGGCAGGGACGCAGGCTCAGGGCCCTGGATTCCCGCTTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 72 bp | CCCGTCACACCTCTGCTGGGTTCACTCTCTCTGAGGTaGCAGAGTGAACAGGGCCGACCACTGAGGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PVTPLLGSLSLR*QSEQGRPLRLA Trigger: GGCCAGCCTCAGTGGTCGGCCCTGTTCACTCTGCCACCTCAGAGAGAGTGAACCCAGCAGAGGTGTGACGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 72 bp | CAGGATGCGCCGGGTTTCAGCCTCTGTTCTGGGGGCTaGATAAGTCAACTCGGGGCGAGTCCCAAACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: QDAPGFSLCSGG*ISQLGASPKLC Trigger: GCACAGTTTGGGACTCGCCCCGAGTTGACTTATGCAGCCCCCAGAACAGAGGCTGAAACCCGGCGCATCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 72 bp | GCTTCACCAGGATGCGCCGGGTTTCAGCCTCTGTTCTaGGGGCTGCATAAGTCAACTCGGGGCGAGTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: ASPGCAGFQPLF*GLHKSTRGESQ Trigger: TTGGGACTCGCCCCGAGTTGACTTATGCAGCCCCCAGAACAGAGGCTGAAACCCGGCGCATCCTGGTGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CAA 90 bp | ACTTCCTGCCCATCACAGCCACGGCTTCTCCCCTCTGAGGAGGGATaGCTTTCTCAGAAGGGCGAGCTGGTGCTGGGCATGCACGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: TSCPSQPRLLPSEEG*LSQKGELVLGMHAS Trigger: ACTTGCGTGCATGCCCAGCACCAGCTCGCCCTTCTGAGAAAGCAATCCCTCCTCAGAGGGGAGAAGCCGTGGCTGTGATGGGCAGGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 72 bp | CCTCTGAGGAGGGATTGCTTTCTCAGAAGGGCGAGCTaGTGCTGGGCATGCACGCAAGTGTCCAGAAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: PLRRDCFLRRAS*CWACTQVSRKR Trigger: CCGCTTTCTGGACACTTGCGTGCATGCCCAGCACCAGCTCGCCCTTCTGAGAAAGCAATCCCTCCTCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CAA 72 bp | GACACTTCTCCTTGCCTCTTGCCTCTTGGGAAGCCTTaGATGGGCTGCACCCTGACGCGACCCCTTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: DTSPCLLPLGKP*MGCTLTRPLSR Trigger: CCTGGAAAGGGGTCGCGTCAGGGTGCAGCCCATCAAAGGCTTCCCAAGAGGCAAGAGGCAAGGAGAAGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 72 bp | CTGAGGAGGGATTGCTTTCTCAGAAGGGCGAGCTGGTaGTGGGCATGCACGCAAGTGTCCAGAAAGCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LRRDCFLRRASW*WACTQVSRKRE Trigger: TTCCCGCTTTCTGGACACTTGCGTGCATGCCCAGCACCAGCTCGCCCTTCTGAGAAAGCAATCCCTCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS GCA 72 bp | GGCTGCATAAGTCAACTCGGGGCGAGTCCCAAACTGTaGTGGGCTTCGGTTTATCACAGTGGGGCTACCAGA | + |
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Preference number: 6 (lower is better) Translates to: GCISQLGASPKL*WASVYHSGATR Trigger: TCTGGTAGCCCCACTGTGATAAACCGAAGCCCAGCACAGTTTGGGACTCGCCCCGAGTTGACTTATGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 72 bp | CAGCAGCAACATCCTTGGTGGAAAAGTTCAAGAATCTaGTCCAAAGGCAGCCTGAGTGAGCCAGCCGGGACC | + |
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Preference number: 6 (lower is better) Translates to: QQQHPWWKSSRI*SKGSLSEPAGT Trigger: GGTCCCGGCTGGCTCACTCAGGCTGCCTTTGGACCAGATTCTTGAACTTTTCCACCAAGGATGTTGCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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| CDS CCA 72 bp | TGCATAAGTCAACTCGGGGCGAGTCCCAAACTGTGCTaGGCTTCGGTTTATCACAGTGGGGCTACCAGACAC | + |
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Preference number: 6 (lower is better) Translates to: CISQLGASPKLC*ASVYHSGATRH Trigger: GTGTCTGGTAGCCCCACTGTGATAAACCGAAGCCCAGCACAGTTTGGGACTCGCCCCGAGTTGACTTATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441418.2 ENST00000610870.2 |
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