RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000104783

Ensembl transcript IDs: ENST00000597184.5, ENST00000598836.1, ENST00000599107.1, ENST00000599720.5, ENST00000600408.1, ENST00000600909.1, ENST00000601549.2, ENST00000615047.4, ENST00000648053.1, ENST00000648319.1

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGAGAGTGAGAGTGGGACACACCGAGGTGCAGACAGAAACCGGTaGGCAGAAGTGGGAGACAGGGGGCAGGTGTTTCCGGGCCCCGAG +
Preference number: 1 (lower is better)
Translates to: RESESGTHRGADRNR*AEVGDRGQVFPGPE
Trigger: CTCGGGGCCCGGAAACACCTGCCCCCTGTCTCCCACTTCTGCCCACCGGTTTCTGTCTGCACCTCGGTGTGTCCCACTCTCACTCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR TCA 90 bp CCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTAACTaGAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTT +
Preference number: 1 (lower is better)
Translates to: PPQPHTQFFSSASGN*SLPESWIRAPSTLF
Trigger: AAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR TCA 90 bp CAAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATG +
Preference number: 1 (lower is better)
Translates to: QANPLQARAPFGPCT*GALFRAGSGVAETM
Trigger: CATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR GCA 90 bp CAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCAC +
Preference number: 1 (lower is better)
Translates to: QPTPSQGPLWSLHLR*FVQGWVRSGRDDVH
Trigger: GTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR CCA 90 bp CAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGG +
Preference number: 1 (lower is better)
Translates to: QGPLWSLHLRCFVQG*VRSGRDDVHHLSTG
Trigger: CCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR CCA 90 bp CAGCAGCCATCAGCAAGCCAACCCACTCCAAGCCAGGGCCCCCTTTaGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGT +
Preference number: 1 (lower is better)
Translates to: QQPSASQPTPSQGPL*SLHLRCFVQGWVRS
Trigger: ACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTTGCTGATGGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR CCA 90 bp ATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTaGCGGAACCTGGGTGTCCTGACCTGGACAGGCATGGACATGCAC +
Preference number: 1 (lower is better)
Translates to: MEFTCSRSFRCFSRT*RNLGVLTWTGMDMH
Trigger: GTGCATGTCCATGCCTGTCCAGGTCAGGACACCCAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
3UTR GCA 90 bp GGGTGTCCTGACCTGGACAGGCATGGACATGCACACACACAGCCGTaGAGAGAGGTGACTTGGACATGGGTGCACATGGACACGTGTGCA +
Preference number: 1 (lower is better)
Translates to: GCPDLDRHGHAHTQP*REVTWTWVHMDTCA
Trigger: TGCACACGTGTCCATGTGCACCCATGTCCAAGTCACCTCTCTGCACGGCTGTGTGTGTGCATGTCCATGCCTGTCCAGGTCAGGACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
3UTR CCA 90 bp GTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCTGGAGAGACAGAGAGACTGATGGAG +
Preference number: 1 (lower is better)
Translates to: VAETMSTTSVLGKVA*FLLVGPGETERLME
Trigger: CTCCATCAGTCTCTCTGTCTCTCCAGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR TCA 90 bp CCCAGGGACCCAGGAGTCCTGCCTCCAGTCGCCTGCACTTGTAACTaGGAGCTGGAGGTCGTCCATAGCAGCATAGTGAGAGTGTTTTTG +
Preference number: 1 (lower is better)
Translates to: PRDPGVLPPVACTCN*ELEVVHSSIVRVFL
Trigger: CAAAAACACTCTCACTATGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGCGACTGGAGGCAGGACTCCTGGGTCCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR TCA 90 bp CAGCTTCCCCGCCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTaGGCTGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCAT +
Preference number: 1 (lower is better)
Translates to: QLPRQRVNLFLQGPV*AAQILLQVIQDHVH
Trigger: ATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGGCGGGGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
3UTR GCA 90 bp CATCAAGGGTCAGTGAAGGGGAGAGGGTACACCATCTTCCTTCACTaGCAGTCCAGCCCCGAACTGAGTCCTTTCCTCCAGACAGTGCCA +
Preference number: 1 (lower is better)
Translates to: HQGSVKGRGYTIFLH*QSSPELSPFLQTVP
Trigger: TGGCACTGTCTGGAGGAAAGGACTCAGTTCGGGGCTGGACTGGCAGTGAAGGAAGATGGTGTACCCTCTCCCCTTCACTGACCCTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR GCA 90 bp CCAGCAGCTTGCGCTGATGCCTGCGGGCAGCATGAGACTCCTTCCTaGGAGTATGTTTGTAGAACATCCAGGCTTCTTGTAGCACTCGGG +
Preference number: 1 (lower is better)
Translates to: PAACADACGQHETPS*EYVCRTSRLLVALG
Trigger: CCCGAGTGCTACAAGAAGCCTGGATGTTCTACAAACATACTCGCAGGAAGGAGTCTCATGCTGCCCGCAGGCATCAGCGCAAGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR GCA 90 bp TCCCCGCCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGCTaGTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTTGG +
Preference number: 1 (lower is better)
Translates to: SPPACQSVSPGPGVS*SDSAAGHTGSCASW
Trigger: CCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
3UTR GCA 90 bp GTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTaGTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGTCCACC +
Preference number: 1 (lower is better)
Translates to: VSICFSRARCELLRF*CRSYRIMCILEMST
Trigger: GGTGGACATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
3UTR GCA 90 bp TCAATCTGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTGCTaGAGGTCATACAGGATCATGTGCATCTTGGAGATGTCCACCATG +
Preference number: 1 (lower is better)
Translates to: SICFSRARCELLRFC*RSYRIMCILEMSTM
Trigger: CATGGTGGACATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
3UTR-3UTR CCA 90 bp GGTGGGCAGAAGTGGGAGACAGGGGGCAGGTGTTTCCGGGCCCCGAGGCCAGGGTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: GGQKWETGGRCFRAPRPGCFVQG*VRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA...CCCTGGCCTCGGGGCCCGGAAACACCTGCCCCCTGTCTCCCACTTCTGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR-3UTR GCA 90 bp CACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTAACCCTTCCTCCAGGATaGCTTCCTGCCCAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: HLQPRPSLIPSSSARPAVTLPPG*LPAQVP
Trigger: TGGGACTTGGGCAGGAAGGCATCCTGGAGGAAGGGT...TACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR-3UTR CCA 90 bp CACACCGAGGTGCAGACAGAAACCGGTGGGCAGAAGTGGGAGACAGGGGGCAGGAGCCACATAGGGTGCTaGCCACAGGAACCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: HTEVQTETGGQKWETGGRSHIGC*PQEPFL
Trigger: GAGGAAGGGTTCCTGTGGCCAGCACCCTATGTGGCT...CCTGCCCCCTGTCTCCCACTTCTGCCCACCGGTTTCTGTCTGCACCTCGGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR CAA 90 bp CCAGCAGCCATCAGCAAGCCAACCCACTCCAAGCCAGGGCCCCCTTaGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: PAAISKPTHSKPGPP*VLALEVLCSGLGQE
Trigger: CTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTTGCTGATGGCTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR GCA 90 bp CACACCGAGGTGCAGACAGAAACCGGTGGGCAGAAGTGGGAGACAGGGGGCAGGCTTAGCCACATAGGGTaGTGGCCACAGGAACCCTTC +
Preference number: 2 (lower is better)
Translates to: HTEVQTETGGQKWETGGRLSHIG*WPQEPF
Trigger: GAAGGGTTCCTGTGGCCAGCACCCTATGTGGCTAAG...CCTGCCCCCTGTCTCCCACTTCTGCCCACCGGTTTCTGTCTGCACCTCGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR-3UTR GCA 90 bp GCATCCAGCTTCCCCGCCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGGGACAGGCATGGACATaGACACACACAGCCGTGCAG +
Preference number: 2 (lower is better)
Translates to: ASSFPASVSICFSRARCEGQAWT*THTAVQ
Trigger: CTGCACGGCTGTGTGTGTGCATGTCCATGCCTGTCC...CTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGGCGGGGAAGCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600408.1
3UTR-3UTR CCA 90 bp ATGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: MFPPGASGGPRPTHFSQRLGKVA*FLLVGP
Trigger: TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAG...ACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp AGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCACCTGGGGCCTCAGGTaGGCCAAGGCCTACCCACTT +
Preference number: 2 (lower is better)
Translates to: RCFVQGWVRSGRDDVHHLTWGLR*AKAYPL
Trigger: AAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGT...GAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp CTGGAAAAATGGTGTCCTCTTTGTTGTCCCACCAGGGGGCGCCACCTCCAGCCCAGCCTCCCAGAATCCTaGATCCGGGCCCCTAGTACC +
Preference number: 2 (lower is better)
Translates to: LEKWCPLCCPTRGRHLQPSLPES*IRAPST
Trigger: GGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCT...GGGCTGGAGGTGGCGCCCCCTGGTGGGACAACAAAGAGGACACCATTTTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp ATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCGATCTTGCCCCACATaGTGCCCGGCACCACGTCAC +
Preference number: 2 (lower is better)
Translates to: MEFTCSRSFRCFSRTWRNRSCPT*CPAPRH
Trigger: GTGACGTGGTGCCGGGCACCATGTGGGGCAAGATCG...GTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR CAA 90 bp GCAAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGAT +
Preference number: 2 (lower is better)
Translates to: ASQPTPSQGPLWSLH*RCFVQGWVRSGRDD
Trigger: ATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR CAA 90 bp CCATCAGCAAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTaGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: PSASQPTPSQGPLWS*HLRCFVQGWVRSGR
Trigger: TCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTTGCTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR TCA 90 bp CACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTATTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: HLQPRPSLIPSSSARPAVFGPCT*GALFRA
Trigger: AGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAA...TACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp GGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTGGGCTGGGTCAGGAGTaGCAGAGACGATGTCCACCA +
Preference number: 2 (lower is better)
Translates to: GWVRSGRDDVHHLSTGESGLGQE*QRRCPP
Trigger: TGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC...ACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp GCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCACCTGGGGCCTCAGGTaGGCCAAGGCCTACCCACTT +
Preference number: 2 (lower is better)
Translates to: AETMSTTSVLGKVAWFLLTWGLR*AKAYPL
Trigger: AAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGT...GAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp CCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGACCTGGGGCCTCAGGTaGGCCAAGGCCTACCCACTT +
Preference number: 2 (lower is better)
Translates to: PLVLALEVLCSGLGQEWQTWGLR*AKAYPL
Trigger: AAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGT...CTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTGACCATGTTCCCACCTaGGGCCTCAGGTGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGDHVPT*GLRWAK
Trigger: CTTGGCCCACCTGAGGCCCCAGGTGGGAACATGGTC...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp GGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTCCCAGAATCCTaGATCCGGGCCCCTAGTACC +
Preference number: 2 (lower is better)
Translates to: GWVRSGRDDVHHLSTGESSLPES*IRAPST
Trigger: GGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCT...ACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR TCA 90 bp TGCCTCCAGTCGCCTGCACTTGTAACTGAGAGCTGGAGGTCGTCCATAGCAGCATATGCAGAGTGGGGGTaGCCATGTTCCCACCTGGGG +
Preference number: 2 (lower is better)
Translates to: CLQSPALVTESWRSSIAAYAEWG*PCSHLG
Trigger: CCCCAGGTGGGAACATGGTCACCCCCACTCTGCATA...TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGCGACTGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR TCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTTCGGCCAGCGGTAACTaGAGCCTCCCAGAATCCTGG +
Preference number: 2 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGSASGN*SLPESW
Trigger: CCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGA...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR GCA 90 bp ATACCCAGTTCTTCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGAGGGACCCAGGAGTCCTaGCTCCAGTCGCCTGCACTT +
Preference number: 2 (lower is better)
Translates to: IPSSSARPAVTEASQNPGGTQES*LQSPAL
Trigger: AAGTGCAGGCGACTGGAGGCAGGACTCCTGGGTCCC...TCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGAAGAACTGGGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp TGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTAGCCAGGGCCCCCTTTaGTCCTTGCACTTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: CFVQGWVRSGRDDVHHLSSQGPL*SLHLRC
Trigger: GCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT...ACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp GCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCAGCCTCCCAGAATCCTaGATCCGGGCCCCTAGTACC +
Preference number: 2 (lower is better)
Translates to: AETMSTTSVLGKVAWFLLSLPES*IRAPST
Trigger: GGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCT...GAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR TCA 90 bp GAGCTGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGCCTGGCGGAACGCGTTaGTGGCGGCCAGCAGCTTGC +
Preference number: 2 (lower is better)
Translates to: ELLRFCCRSYRIMCILEMPGGTR*WRPAAC
Trigger: GCAAGCTGCTGGCCGCCATCAACGCGTTCCGCCAGG...CATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR GCA 90 bp GCCCGGTGTGAGCTGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCACAGGCAGACGATCTTaGCCCACATGGTGCCCGGCA +
Preference number: 2 (lower is better)
Translates to: ARCELLRFCCRSYRIMCITGRRS*PTWCPA
Trigger: TGCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGT...GATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR CCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGCTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVLGKVA*FLLVGP
Trigger: TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAG...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp TGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTGCAGACAGAAACCGGTaGGCAGAAGTGGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: CFVQGWVRSGRDDVHHLSADRNR*AEVGDR
Trigger: CCTGTCTCCCACTTCTGCCCACCGGTTTCTGTCTGC...ACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR-3UTR TCA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGTTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGFGPCT*GALFRA
Trigger: AGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAA...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR TCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTGCCTGCACTTGTAACTaGGAGCTGGAGGTCGTCCAT +
Preference number: 2 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPACTCN*ELEVVH
Trigger: ATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGC...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR TCA 90 bp TGCGCTGATGCCTGCGGGCAGCATGAGACTCCTTCCTGCGAGTATGTTTGTAGATGCAGCAGACACCCATaGCTCCAGTGCACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: CADACGQHETPSCEYVCRCSRHP*LQCTGR
Trigger: TCTGCCTGTGCACTGGAGTCATGGGTGTCTGCTGCA...TCTACAAACATACTCGCAGGAAGGAGTCTCATGCTGCCCGCAGGCATCAGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR GCA 90 bp GGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCACCATCTTCCTTCACTaGCAGTCCAGCCCCGAACTG +
Preference number: 2 (lower is better)
Translates to: GVAETMSTTSVLGKVAWFTIFLH*QSSPEL
Trigger: CAGTTCGGGGCTGGACTGGCAGTGAAGGAAGATGGT...GAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR-3UTR CCA 90 bp ATACCCAGTTCTTCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGACTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: IPSSSARPAVTEASQNPGLGKVA*FLLVGP
Trigger: TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAG...TCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGAAGAACTGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp CCCGGTGTGAGCTGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTGGGCTGGGTCAGGAGTaGCAGAGACGATGTCCACCA +
Preference number: 2 (lower is better)
Translates to: PGVSCSDSAAGHTGSCASGLGQE*QRRCPP
Trigger: TGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC...AGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR CCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGCFVQG*VRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVCFVQG*VRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR CAA 90 bp ATACAGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTaGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACGC +
Preference number: 2 (lower is better)
Translates to: IQDHVHLGDVHHGVH*FPELPVFQPHLAER
Trigger: GCGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATGATCCTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR GCA 90 bp GTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCATCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: VTEASQNPGSGPLVPSFPSLHLR*FVQGWV
Trigger: GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA...TGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR GCA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTATCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVSLHLR*FVQGWV
Trigger: GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR GCA 90 bp GCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCCCACCAGGTGCTCTCTaGAGCTCTGGAAAAATGGTG +
Preference number: 2 (lower is better)
Translates to: AETMSTTSVLGKVAWFLLPPGAL*SSGKMV
Trigger: CACCATTTTTCCAGAGCTGCAGAGAGCACCTGGTGG...GAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp AGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCAGCCAGGGCCCCCTTTaGTCCTTGCACTTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: RIMCILEMSTMEFTCSRSSQGPL*SLHLRC
Trigger: GCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT...GCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATGATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR CAA 90 bp ATACAGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTaGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCT +
Preference number: 2 (lower is better)
Translates to: IQDHVHLGDVHHGVH*FPELPVFQPHLAEP
Trigger: AGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATGATCCTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
3UTR-3UTR TCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGTTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVFGPCT*GALFRA
Trigger: AGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAA...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR GCA 90 bp TCTGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTGCTGCAGGTCATACATCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: SVSPGPGVSCSDSAAGHTSLHLR*FVQGWV
Trigger: GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA...TGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR GCA 90 bp GAGCTGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGGCTTGCGCTGATGCCTaGGGGCAGCATGAGACTCCT +
Preference number: 2 (lower is better)
Translates to: ELLRFCCRSYRIMCILEMACADA*GQHETP
Trigger: AGGAGTCTCATGCTGCCCGCAGGCATCAGCGCAAGC...CATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR CCA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGACAGAGACATTGGATaGACAGCCAGACAATGTGCC +
Preference number: 2 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVDRDIG*TARQCA
Trigger: GGCACATTGTCTGGCTGTCCATCCAATGTCTCTGTC...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR-3UTR CCA 90 bp ATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: ILEMSTMEFTCSRSFRCFCFVQG*VRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA...GAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR CCA 90 bp GCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGTCCACCTGGGTGTCCTGACCTaGACAGGCATGGACATGCAC +
Preference number: 2 (lower is better)
Translates to: AQILLQVIQDHVHLGDVHLGVLT*TGMDMH
Trigger: GTGCATGTCCATGCCTGTCCAGGTCAGGACACCCAG...GTGGACATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
3UTR-3UTR CCA 90 bp TTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCGACCATGTTCCCACCTaGGGCCTCAGGTGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: FITKIRAEAGELHFFLPTDHVPT*GLRWAK
Trigger: CTTGGCCCACCTGAGGCCCCAGGTGGGAACATGGTC...GGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR TCA 90 bp TTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCTCGGCCAGCGGTAACTaGAGCCTCCCAGAATCCTGG +
Preference number: 2 (lower is better)
Translates to: FITKIRAEAGELHFFLPTSASGN*SLPESW
Trigger: CCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGA...GGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp TTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACGCGTTGATGGCATCTCTTTGGTATACTaGATATCCATCATGAAGTTG +
Preference number: 2 (lower is better)
Translates to: LFPELPVFQPHLAERVDGISLVY*ISIMKL
Trigger: CAACTTCATGATGGATATCCAGTATACCAAAGAGAT...GCCATCAACGCGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR GCA 90 bp TTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCGACAGCCAGACAATGTaGCCAGGACAGGCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: FITKIRAEAGELHFFLPTDSQTM*PGQAER
Trigger: TCTCTCTGCCTGTCCTGGGCACATTGTCTGGCTGTC...GGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR-3UTR CCA 90 bp ATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCAGGCTTGTAACTGAGAGCTaGAGGTCGTCCATAGCAGCA +
Preference number: 2 (lower is better)
Translates to: ITKIRAEAGELHFFLPTRLVTES*RSSIAA
Trigger: TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAG...CCTGGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CCA 90 bp CTGGCTTTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCAGCCAGGGCCCCCTTTaGTCCTTGCACTTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: LALTFITKIRAEAGELHFSQGPL*SLHLRC
Trigger: GCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT...GAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAAAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR TCA 90 bp TTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCAGGAAGAGGGAGAGTaGGAGTGGGACACACCGAGG +
Preference number: 2 (lower is better)
Translates to: LTFITKIRAEAGELHFFLQEEGE*EWDTPR
Trigger: CCTCGGTGTGTCCCACTCTCACTCTCCCTCTTCCTG...GAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR-3UTR CCA 90 bp TTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCAGCCAGGGCCCCCTTTaGTCCTTGCACTTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: LTFITKIRAEAGELHFFLSQGPL*SLHLRC
Trigger: GCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT...GAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR GCA 72 bp AGCCTGGTTCCTCCTCGTGGGTCCAGCTACTTGGACTaGTGGCTGGGTTCTGGAAGCTGCCTCGGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: SLVPPRGSSYLD*WLGSGSCLGPR
Trigger: CCTGGGGCCGAGGCAGCTTCCAGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCACGAGGAGGAACCAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR CCA 72 bp CTGGTTCCTCCTCGTGGGTCCAGCTACTTGGACTGCTaGCTGGGTTCTGGAAGCTGCCTCGGCCCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: LVPPRGSSYLDC*LGSGSCLGPRA
Trigger: TGCCCTGGGGCCGAGGCAGCTTCCAGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCACGAGGAGGAACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR CAA 90 bp GCCACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGAAAATGGTGTCCTCTTaGTTGTCCCACCAGGGGGCG +
Preference number: 3 (lower is better)
Translates to: ATSSPAPASYPVLQLGQRKMVSS*LSHQGA
Trigger: CGCCCCCTGGTGGGACAACAAAGAGGACACCATTTT...CCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CAA 90 bp GCCACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGCTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGC +
Preference number: 3 (lower is better)
Translates to: ATSSPAPASYPVLQLGQRLWSLH*RCFVQG
Trigger: GCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAG...CCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR GCA 72 bp CTCCAGTGCACAGGCAGACGATCTTGCCCCACATGGTaGCCGGCACCACGTCACCATAGCCGATGGTCAGGA +
Preference number: 3 (lower is better)
Translates to: LQCTGRRSCPTW*PAPRHHSRWSG
Trigger: TCCTGACCATCGGCTATGGTGACGTGGTGCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGTGCACTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR CCA 72 bp GAGAGTGGGACACACCGAGGTGCAGACAGAAACCGGTaGGCAGAAGTGGGAGACAGGGGGCAGGTGTTTCCG +
Preference number: 3 (lower is better)
Translates to: ESGTHRGADRNR*AEVGDRGQVFP
Trigger: CGGAAACACCTGCCCCCTGTCTCCCACTTCTGCCCACCGGTTTCTGTCTGCACCTCGGTGTGTCCCACTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR CCA 72 bp ACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTaGCGGAACCTGGGTGTCCTGACCTGGACAGGCATG +
Preference number: 3 (lower is better)
Translates to: TCSRSFRCFSRT*RNLGVLTWTGM
Trigger: CATGCCTGTCCAGGTCAGGACACCCAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
3UTR TCA 72 bp CCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCA +
Preference number: 3 (lower is better)
Translates to: PLQARAPFGPCT*GALFRAGSGVA
Trigger: TGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR GCA 72 bp CCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGAC +
Preference number: 3 (lower is better)
Translates to: PSQGPLWSLHLR*FVQGWVRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR TCA 72 bp CCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTAACTaGAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGT +
Preference number: 3 (lower is better)
Translates to: PHTQFFSSASGN*SLPESWIRAPS
Trigger: ACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGAAGAACTGGGTATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR TCA 72 bp GGTTCCTCCTCGTGGGTCCTGGAGAGACAGAGAGACTaGTGGAGAGGCAGGCCAGGAAGAGGGAGAGTGAGA +
Preference number: 3 (lower is better)
Translates to: GSSSWVLERQRD*WRGRPGRGRVR
Trigger: TCTCACTCTCCCTCTTCCTGGCCTGCCTCTCCATCAGTCTCTCTGTCTCTCCAGGACCCACGAGGAGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR-3UTR CAA 90 bp TGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTAAGCCAGGGCCCCCTTaGGTCCTTGCACTTGAGGTG +
Preference number: 3 (lower is better)
Translates to: CFVQGWVRSGRDDVHHLSKPGPP*VLALEV
Trigger: CACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTT...ACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CAA 90 bp TGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTATGGTGTCCTCTTTGTaGTCCCACCAGGGGGCGCCA +
Preference number: 3 (lower is better)
Translates to: CFVQGWVRSGRDDVHHLSMVSSL*SHQGAP
Trigger: TGGCGCCCCCTGGTGGGACAACAAAGAGGACACCAT...ACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR GCA 72 bp GACCTGGACAGGCATGGACATGCACACACACAGCCGTaGAGAGAGGTGACTTGGACATGGGTGCACATGGAC +
Preference number: 3 (lower is better)
Translates to: DLDRHGHAHTQP*REVTWTWVHMD
Trigger: GTCCATGTGCACCCATGTCCAAGTCACCTCTCTGCACGGCTGTGTGTGTGCATGTCCATGCCTGTCCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
3UTR-3UTR CAA 90 bp TCTGCTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTACCTGGCGGAACGCGTaGATGGCGGCCAGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: SAAGHTGSCASWRCPPWSTWRNA*MAASSL
Trigger: CAAGCTGCTGGCCGCCATCAACGCGTTCCGCCAGGT...ACTCCATGGTGGACATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR TCA 72 bp CCAGGAGTCCTGCCTCCAGTCGCCTGCACTTGTAACTaGGAGCTGGAGGTCGTCCATAGCAGCATAGTGAGA +
Preference number: 3 (lower is better)
Translates to: PGVLPPVACTCN*ELEVVHSSIVR
Trigger: TCTCACTATGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGCGACTGGAGGCAGGACTCCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR TCA 72 bp CGCCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTaGGCTGCTCAGATTCTGCTGCAGGTCATACAGGAT +
Preference number: 3 (lower is better)
Translates to: RQRVNLFLQGPV*AAQILLQVIQD
Trigger: ATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
3UTR GCA 72 bp TCAGTGAAGGGGAGAGGGTACACCATCTTCCTTCACTaGCAGTCCAGCCCCGAACTGAGTCCTTTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: SVKGRGYTIFLH*QSSPELSPFLQ
Trigger: CTGGAGGAAAGGACTCAGTTCGGGGCTGGACTGGCAGTGAAGGAAGATGGTGTACCCTCTCCCCTTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR CCA 72 bp CTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGACGATGTCCACCACCTC +
Preference number: 3 (lower is better)
Translates to: LWSLHLRCFVQG*VRSGRDDVHHL
Trigger: GAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR CCA 72 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCTGGAGAGACAGAGAGA +
Preference number: 3 (lower is better)
Translates to: TMSTTSVLGKVA*FLLVGPGETER
Trigger: TCTCTCTGTCTCTCCAGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
3UTR CCA 72 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCAGCTACTTGGACTGCT +
Preference number: 3 (lower is better)
Translates to: TMSTTSVLGKVA*FLLVGPATWTA
Trigger: AGCAGTCCAAGTAGCTGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR CAA 90 bp TGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTCTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGC +
Preference number: 3 (lower is better)
Translates to: CFVQGWVRSGRDDVHHLSLWSLH*RCFVQG
Trigger: GCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAG...ACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CAA 90 bp GTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCACTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGC +
Preference number: 3 (lower is better)
Translates to: VTEASQNPGSGPLVPSFPLWSLH*RCFVQG
Trigger: GCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAG...TGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CAA 90 bp ATACCCAGTTCTTCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGAAAAATGGTGTCCTCTTaGTTGTCCCACCAGGGGGCG +
Preference number: 3 (lower is better)
Translates to: IPSSSARPAVTEASQNPGKMVSS*LSHQGA
Trigger: CGCCCCCTGGTGGGACAACAAAGAGGACACCATTTT...TCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGAAGAACTGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR GCA 72 bp TGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTaGTGCAGGTCATACAGGATCATGTGCATCTTGGAG +
Preference number: 3 (lower is better)
Translates to: CFSRARCELLRF*CRSYRIMCILE
Trigger: CTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
3UTR GCA 72 bp GCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGCTaGTCAGATTCTGCTGCAGGTCATACAGGATCATGT +
Preference number: 3 (lower is better)
Translates to: ACQSVSPGPGVS*SDSAAGHTGSC
Trigger: ACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGACACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
3UTR GCA 72 bp TGCGCTGATGCCTGCGGGCAGCATGAGACTCCTTCCTaGGAGTATGTTTGTAGAACATCCAGGCTTCTTGTA +
Preference number: 3 (lower is better)
Translates to: CADACGQHETPS*EYVCRTSRLLV
Trigger: TACAAGAAGCCTGGATGTTCTACAAACATACTCGCAGGAAGGAGTCTCATGCTGCCCGCAGGCATCAGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR CAA 90 bp CCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGATAGTGAGAGTGTTTTaGATGAGGGTATGCAGAGTG +
Preference number: 3 (lower is better)
Translates to: PLVLALEVLCSGLGQEWQIVRVF*MRVCRV
Trigger: CACTCTGCATACCCTCATCAAAAACACTCTCACTAT...CTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CAA 90 bp TTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCATGGTGTCCTCTTTGTaGTCCCACCAGGGGGCGCCA +
Preference number: 3 (lower is better)
Translates to: FITKIRAEAGELHFFLPTMVSSL*SHQGAP
Trigger: TGGCGCCCCCTGGTGGGACAACAAAGAGGACACCAT...GGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR-3UTR CAA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTGACTCCTTCATCTCTTaGGTATACTGGATATCCATC +
Preference number: 3 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPDSFIS*VYWISI
Trigger: GATGGATATCCAGTATACCAAAGAGATGAAGGAGTC...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599720.5
3UTR-3UTR CAA 90 bp ATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCAGGCTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGC +
Preference number: 3 (lower is better)
Translates to: ITKIRAEAGELHFFLPTRLWSLH*RCFVQG
Trigger: GCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAG...CCTGGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR CCA 72 bp CATACAGGATCATGTGCATCTTGGAGATGTCCACCATaGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCA +
Preference number: 3 (lower is better)
Translates to: HTGSCASWRCPP*SSLVPGASGVS
Trigger: TGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATGATCCTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
3UTR-3UTR CAA 90 bp TTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCATGGTGTCCTCTTTGTaGTCCCACCAGGGGGCGCCA +
Preference number: 3 (lower is better)
Translates to: LTFITKIRAEAGELHFFLMVSSL*SHQGAP
Trigger: TGGCGCCCCCTGGTGGGACAACAAAGAGGACACCAT...GAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
3UTR TCA 72 bp TTTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTaGGTTACACTTCTTCCTCCCCACCAGGTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: FNIYYKDKSRGW*VTLLPPHQVLS
Trigger: AGAGAGCACCTGGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp TGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCGCCAGAGGCCAAGCGTaGGGCCGAGCAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: CSHLGPQVGQGLPTLASVARGQA*GRAAGG
Trigger: GCCGCCTGCTGCTCGGCCTCACGCTTGGCCTCTGGC...GACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp ATGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCTCTGGGGAGTGGTaGCGGCCAGGCAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: MFPPGASGGPRPTHFSQRPSGEW*RPGRAG
Trigger: CCCCGCCCTGCCTGGCCGTCACCACTCCCCAGAGGG...ACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR TCA 90 bp CACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTACCTGGCGGAACGCGTTaGTGGCGGCCAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: HLQPRPSLIPSSSARPAVPGGTR*WRPAAC
Trigger: GCAAGCTGCTGGCCGCCATCAACGCGTTCCGCCAGG...TACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGCTGGGTTCTGGAAGCTaGCTCGGCCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GASGGPRPTHFSQRPLQQLGSGS*LGPRAV
Trigger: CACTGCCCTGGGGCCGAGGCAGCTTCCAGAACCCAG...CTGCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCCACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGACCTGGGGCCTCAGGTaGGCCAAGGCCTACCCACTT +
Preference number: 4 (lower is better)
Translates to: ATSSPAPASYPVLQLGQRTWGLR*AKAYPL
Trigger: AAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGT...CCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GCATCCAGCTTCCCCGCCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGGCGGCCCTCACGCGTTaGTGGCGGCCAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ASSFPASVSICFSRARCEAALTR*WRPAAC
Trigger: GCAAGCTGCTGGCCGCCATCAACGCGTGAGGGCCGC...CTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGGCGGGGAAGCTGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR GCA 90 bp GCCACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTGCAGGTCGTCAGCCTaGTCTGCTGGCTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: ATSSPAPASYPVLQLGQRCRSSA*SAGSGT
Trigger: AGTCCCAGAGCCAGCAGAGCAGGCTGACGACCTGCA...CCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR GCA 90 bp CGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCGTAGGAAGCGTTGCCTaGCGCCCGGTCAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: RPAVTEASQNPGSGPLVPVGSVA*RPVSAT
Trigger: CGTGGCGCTGACCGGGCGGCAGGCAACGCTTCCTAC...GGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR CCA 90 bp GGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGACCTGGGGCCTCAGGTaGGCCAAGGCCTACCCACTT +
Preference number: 4 (lower is better)
Translates to: GASGGPRPTHFSQRPLQQTWGLR*AKAYPL
Trigger: AAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGT...CTGCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp CGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTGCGGTAGGAAGCGTTaGGCAGGACGCCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: RPAVTEASQNPGSGPLVPCGRKR*AGRRCA
Trigger: TGCGCAGCGGCGTCCTGCTCAACGCTTCCTACCGCA...GGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648319.1
CDS-3UTR GCA 90 bp GGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGGGGCCCGGTGTGAGCTaGTCAGATTCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GASGGPRPTHFSQRPLQQGPGVS*SDSAAG
Trigger: ACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCC...CTGCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCGCTTGCGCTGATGCCTaGGGGCAGCATGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: LGPQVGQGLPTLASVPSSACADA*GQHETP
Trigger: AGGAGTCTCATGCTGCCCGCAGGCATCAGCGCAAGC...GCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp AGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCCGCACGGGCGCCGGGTaGAGCCCACACACCACCAGC +
Preference number: 4 (lower is better)
Translates to: RCFVQGWVRSGRDDVHHLRTGAG*SPHTTS
Trigger: GCTGGTGGTGTGTGGGCTGCACCCGGCGCCCGTGCG...GAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648319.1
CDS-3UTR GCA 90 bp GGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAAATCCCGGCCAGGGCTaGGGGGAGGTCAGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: GALFRAGSGVAETMSTTSNPGQG*GEVSGA
Trigger: GGCGCCGCTGACCTCCCCGCAGCCCTGGCCGGGATT...TGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648319.1
CDS-3UTR CCA 90 bp CTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCGGGCTGGGTCAGGAGTaGCAGAGACGATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LGPQVGQGLPTLASVPSSGLGQE*QRRCPP
Trigger: TGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC...GCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGCCTCCCAGAATCCTaGATCCGGGCCCCTAGTACC +
Preference number: 4 (lower is better)
Translates to: LGPQVGQGLPTLASVPSSSLPES*IRAPST
Trigger: GGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCT...GCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCCACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGGTGGGTCCAGCTACTTaGACTGCTGGCTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ATSSPAPASYPVLQLGQRVGPAT*TAGWVL
Trigger: CAGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCAC...CCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCCCTGGCGGAACGCGTTaGTGGCGGCCAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVPGGTR*WRPAAC
Trigger: GCAAGCTGCTGGCCGCCATCAACGCGTTCCGCCAGG...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGGCCCGTTGTCGGTCATaGACAGCTGGACCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GASGGPRPTHFSQRPLQQARCRS*TAGPLW
Trigger: CCAAAGAGGTCCAGCTGTTCATGACCGACAACGGGC...CTGCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp CACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTATGGCGGAAGCGGACTTaGTTGAGAGCGCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: HLQPRPSLIPSSSARPAVWRKRT*LRAPML
Trigger: CAGCATCGGCGCTCTCAATCAAGTCCGCTTCCGCCA...TACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCGGGACCCAGGAGTCCTaGCTCCAGTCGCCTGCACTT +
Preference number: 4 (lower is better)
Translates to: CSHLGPQVGQGLPTLASVGTQES*LQSPAL
Trigger: AAGTGCAGGCGACTGGAGGCAGGACTCCTGGGTCCC...GACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTATCTTGCCCCACATGGTaGCCGGCACCACGTCACCAT +
Preference number: 4 (lower is better)
Translates to: HLQPRPSLIPSSSARPAVSCPTW*PAPRHH
Trigger: ATGGTGACGTGGTGCCGGGCACCATGTGGGGCAAGA...TACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCGTCGTCAGCCTGCTCTaGTGGCTCTGGGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: LGPQVGQGLPTLASVPSSVVSLL*WLWDFC
Trigger: GCAAAAGTCCCAGAGCCAGCAGAGCAGGCTGACGAC...GCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR CCA 90 bp TGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCGACCATGTTCCCACCTaGGGCCTCAGGTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CSHLGPQVGQGLPTLASVDHVPT*GLRWAK
Trigger: CTTGGCCCACCTGAGGCCCCAGGTGGGAACATGGTC...GACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCGCGGCCCTCACGCGTTaGTGGCGGCCAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GVAETMSTTSVLGKVAWFAALTR*WRPAAC
Trigger: GCAAGCTGCTGGCCGCCATCAACGCGTGAGGGCCGC...GAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR GCA 90 bp GGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGACCATCTTCCTTCACTaGCAGTCCAGCCCCGAACTG +
Preference number: 4 (lower is better)
Translates to: GASGGPRPTHFSQRPLQQTIFLH*QSSPEL
Trigger: CAGTTCGGGGCTGGACTGGCAGTGAAGGAAGATGGT...CTGCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR GCA 90 bp TCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGGGACCCAGGAGTCCTaGCTCCAGTCGCCTGCACTT +
Preference number: 4 (lower is better)
Translates to: SARPAVTEASQNPGSGPLGTQES*LQSPAL
Trigger: AAGTGCAGGCGACTGGAGGCAGGACTCCTGGGTCCC...TAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTGCCCCACATGGTaGCCGGCACCACGTCACCAT +
Preference number: 4 (lower is better)
Translates to: RPAVTEASQNPGSGPLVPSCPTW*PAPRHH
Trigger: ATGGTGACGTGGTGCCGGGCACCATGTGGGGCAAGA...GGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCACAGGCAGACGATCTTaGCCCACATGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: CSHLGPQVGQGLPTLASVTGRRS*PTWCPA
Trigger: TGCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGT...GACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCACGATCTGCGCCGCCTaGCGCCCGGTCAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: LHLRCFVQGWVRSGRDDVTICAA*RPVSAT
Trigger: CGTGGCGCTGACCGGGCGGCAGGCGGCGCAGATCGT...GACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648319.1
CDS-3UTR CCA 90 bp CTGGAAAAATGGTGTCCTCTTTGTTGTCCCACCAGGGGGCGCCACCTCCAGCCCCTGCTGGCTGGGTTCTaGAAGCTGCCTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LEKWCPLCCPTRGRHLQPLLAGF*KLPRPQ
Trigger: CTGGGGCCGAGGCAGCTTCCAGAACCCAGCCAGCAG...GGGCTGGAGGTGGCGCCCCCTGGTGGGACAACAAAGAGGACACCATTTTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LGPQVGQGLPTLASVPSSCFVQG*VRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA...GCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCAGCCAGGGCCCCCTTTaGTCCTTGCACTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RPAVTEASQNPGSGPLVPSQGPL*SLHLRC
Trigger: GCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT...GGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp ATGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTACCTGGGGCCTCAGGTaGGCCAAGGCCTACCCACTT +
Preference number: 4 (lower is better)
Translates to: MFPPGASGGPRPTHFSQRTWGLR*AKAYPL
Trigger: AAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGT...ACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp TGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCACAGGGCAGCCACTGTaGCTTGCAGGTCGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: CSHLGPQVGQGLPTLASVTGQPL*LAGRQP
Trigger: AGGCTGACGACCTGCAAGCCACAGTGGCTGCCCTGT...GACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp TCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCTGGGTGCGATCTTGCCCCACATaGTGCCCGGCACCACGTCAC +
Preference number: 4 (lower is better)
Translates to: SLVPGASGVSAAPGGTWVRSCPT*CPAPRH
Trigger: GTGACGTGGTGCCGGGCACCATGTGGGGCAAGATCG...CACCCAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR CCA 90 bp TGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCTGTTTCAGCCGCACCTaGCGGAACGCGTTGATGGCG +
Preference number: 4 (lower is better)
Translates to: CSHLGPQVGQGLPTLASVCFSRT*RNALMA
Trigger: CGCCATCAACGCGTTCCGCCAGGTGCGGCTGAAACA...GACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CTGGAAAAATGGTGTCCTCTTTGTTGTCCCACCAGGGGGCGCCACCTCCAGCCCAGCAGCGCTTCCCCTTaGCCCAGGAATCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LEKWCPLCCPTRGRHLQPSSASP*PRNPGQ
Trigger: CTGGCCGGGATTCCTGGGCCAAGGGGAAGCGCTGCT...GGGCTGGAGGTGGCGCCCCCTGGTGGGACAACAAAGAGGACACCATTTTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648319.1
CDS-3UTR TCA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGCTCCAGGGCCCGGTGTaGGCTGCTCAGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGLQGPV*AAQILL
Trigger: CAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAG...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp CACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTAGCCTGCACTTGTAACTaGGAGCTGGAGGTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: HLQPRPSLIPSSSARPAVACTCN*ELEVVH
Trigger: ATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGC...TACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCCCTGGCGGAACGCGTTaGTGGCGGCCAGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: AETMSTTSVLGKVAWFLLPGGTR*WRPAAC
Trigger: GCAAGCTGCTGGCCGCCATCAACGCGTTCCGCCAGG...GAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp AGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGGGCCAGAGGCCAAGCGTaGGGCCGAGCAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RVFLMRVCRVGVTMFPPGARGQA*GRAAGG
Trigger: GCCGCCTGCTGCTCGGCCTCACGCTTGGCCTCTGGC...CCCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CTGGAAAAATGGTGTCCTCTTTGTTGTCCCACCAGGGGGCGCCACCTCCAGCCCGGGACCCAGGAGTCCTaGCTCCAGTCGCCTGCACTT +
Preference number: 4 (lower is better)
Translates to: LEKWCPLCCPTRGRHLQPGTQES*LQSPAL
Trigger: AAGTGCAGGCGACTGGAGGCAGGACTCCTGGGTCCC...GGGCTGGAGGTGGCGCCCCCTGGTGGGACAACAAAGAGGACACCATTTTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GCGGAACCTGGGTGTCCTGACCTGGACAGGCATGGACATGCACACACACAGCCGTCTTGCCCCACATGGTaGCCGGCACCACGTCACCAT +
Preference number: 4 (lower is better)
Translates to: AEPGCPDLDRHGHAHTQPSCPTW*PAPRHH
Trigger: ATGGTGACGTGGTGCCGGGCACCATGTGGGGCAAGA...CGGCTGTGTGTGTGCATGTCCATGCCTGTCCAGGTCAGGACACCCAGGTTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR GCA 90 bp GCATCCAGCTTCCCCGCCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGGCTTGCGCTGATGCCTaGGGGCAGCATGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: ASSFPASVSICFSRARCEACADA*GQHETP
Trigger: AGGAGTCTCATGCTGCCCGCAGGCATCAGCGCAAGC...CTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGGCGGGGAAGCTGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CCA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCGACCATGTTCCCACCTaGGGCCTCAGGTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVDHVPT*GLRWAK
Trigger: CTTGGCCCACCTGAGGCCCCAGGTGGGAACATGGTC...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGAGCCCTGTGCCCTCTaGGGAGTGGTGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVEPCAL*GVVTAR
Trigger: CCTGGCCGTCACCACTCCCCAGAGGGCACAGGGCTC...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615047.4
3UTR CAA 72 bp CCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PTPSQGPLWSLH*RCFVQGWVRSG
Trigger: GCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTCTCCAGGGCCCGGTGTaGGCTGCTCAGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GWVRSGRDDVHHLSTGESLQGPV*AAQILL
Trigger: CAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAG...ACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp CATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACTCCAGGGCCCGGTGTaGGCTGCTCAGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HGVHLFPELPVFQPHLAELQGPV*AAQILL
Trigger: CAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAG...TTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR TCA 90 bp GTGGGACACACCGAGGTGCAGACAGAAACCGGTGGGCAGAAGTGGGAGACAGGGGAGAGACAGAGAGACTaGTGGAGAGGCAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VGHTEVQTETGGQKWETGERQRD*WRGRPG
Trigger: TCCTGGCCTGCCTCTCCATCAGTCTCTCTGTCTCTC...CCCTGTCTCCCACTTCTGCCCACCGGTTTCTGTCTGCACCTCGGTGTGTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR TCA 90 bp GGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGTTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GASGGPRPTHFSQRPLQQFGPCT*GALFRA
Trigger: AGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAA...CTGCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp CGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCGCCTGCACTTGTAACTaGGAGCTGGAGGTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: RPAVTEASQNPGSGPLVPACTCN*ELEVVH
Trigger: ATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGC...GGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGTCGGCCAGCGGTAACTaGAGCCTCCCAGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGSASGN*SLPESW
Trigger: CCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGA...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp CATCCAGCTTCCCCGCCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGCTGCAGCAGACACCCATaGCTCCAGTGCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HPASPPACQSVSPGPGVSCSRHP*LQCTGR
Trigger: TCTGCCTGTGCACTGGAGTCATGGGTGTCTGCTGCA...GCTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGGCGGGGAAGCTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR GCA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCGGGCCCGGTGTGAGCTaGTCAGATTCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVGPGVS*SDSAAG
Trigger: ACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCC...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTACTGGGTTCTGGAAGCTaGCTCGGCCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVLGSGS*LGPRAV
Trigger: CACTGCCCTGGGGCCGAGGCAGCTTCCAGAACCCAG...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTCTGGGTTCTGGAAGCTaGCTCGGCCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGLGSGS*LGPRAV
Trigger: CACTGCCCTGGGGCCGAGGCAGCTTCCAGAACCCAG...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GTGGGACACACCGAGGTGCAGACAGAAACCGGTGGGCAGAAGTGGGAGACAGGGACCCTTCCTCCAGGATaGCTTCCTGCCCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VGHTEVQTETGGQKWETGTLPPG*LPAQVP
Trigger: TGGGACTTGGGCAGGAAGGCATCCTGGAGGAAGGGT...CCCTGTCTCCCACTTCTGCCCACCGGTTTCTGTCTGCACCTCGGTGTGTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR GCA 90 bp AGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCTCCTGCCAGCACCAGTaGCCAGCCGGCCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: RCFVQGWVRSGRDDVHHLSCQHQ*PAGQRL
Trigger: AAGTCTCTGGCCGGCTGGGCACTGGTGCTGGCAGGA...GAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCATCCTGCCAGCACCAGTaGCCAGCCGGCCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: GALFRAGSGVAETMSTTSSCQHQ*PAGQRL
Trigger: AAGTCTCTGGCCGGCTGGGCACTGGTGCTGGCAGGA...TGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GCGGAACCTGGGTGTCCTGACCTGGACAGGCATGGACATGCACACACACAGCCGGGACAGGCATGGACATaGACACACACAGCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: AEPGCPDLDRHGHAHTQPGQAWT*THTAVQ
Trigger: CTGCACGGCTGTGTGTGTGCATGTCCATGCCTGTCC...CGGCTGTGTGTGTGCATGTCCATGCCTGTCCAGGTCAGGACACCCAGGTTCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR GCA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGGTGGCATTAACAGCCTaGCTCTCGGCCACGGACAGC +
Preference number: 4 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGVALTA*LSATDS
Trigger: GCTGTCCGTGGCCGAGAGGCAGGCTGTTAATGCCAC...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGCTGCTGGCTGGGTTCTaGAAGCTGCCTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLVLALEVLCSGLGQEWQLLAGF*KLPRPQ
Trigger: CTGGGGCCGAGGCAGCTTCCAGAACCCAGCCAGCAG...CTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCACTGCTGGCTGGGTTCTaGAAGCTGCCTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VTEASQNPGSGPLVPSFPLLAGF*KLPRPQ
Trigger: CTGGGGCCGAGGCAGCTTCCAGAACCCAGCCAGCAG...TGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCTGCTGGCTGGGTTCTaGAAGCTGCCTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPLLAGF*KLPRPQ
Trigger: CTGGGGCCGAGGCAGCTTCCAGAACCCAGCCAGCAG...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCGGGCTGGGTCAGGAGTaGCAGAGACGATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVGLGQE*QRRCPP
Trigger: TGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGGGGCTGGGTCAGGAGTaGCAGAGACGATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GLGQEWQRRCPPPQYWGKGLGQE*QRRCPP
Trigger: TGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC...CTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGAGCCAGGGCCCCCTTTaGTCCTTGCACTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GLGQEWQRRCPPPQYWGKSQGPL*SLHLRC
Trigger: GCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT...CTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCACCTGGGGCCTCAGGTaGGCCAAGGCCTACCCACTT +
Preference number: 4 (lower is better)
Translates to: PLWSLHLRCFVQGWVRSGTWGLR*AKAYPL
Trigger: AAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGT...GCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGCCTCCCAGAATCCTaGATCCGGGCCCCTAGTACC +
Preference number: 4 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVSLPES*IRAPST
Trigger: GGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCT...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCACAGGGCAGCCACTGTaGCTTGCAGGTCGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVTGQPL*LAGRQP
Trigger: AGGCTGACGACCTGCAAGCCACAGTGGCTGCCCTGT...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGTGGAGATGTCCACCATaGAGTTCACTTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GASGGPRPTHFSQRPLQQWRCPP*SSLVPG
Trigger: TCCGGGAACAAGTGAACTCCATGGTGGACATCTCCA...CTGCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCCACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGGGATCATGTGCATCTTaGAGATGTCCACCATGGAGT +
Preference number: 4 (lower is better)
Translates to: ATSSPAPASYPVLQLGQRGSCAS*RCPPWS
Trigger: ACTCCATGGTGGACATCTCCAAGATGCACATGATCC...CCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CACCTGGCGGAACCTGGGTGTCCTGACCTGGACAGGCATGGACATGCACACACATGTTTCAGCCGCACCTaGCGGAACCTGGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HLAEPGCPDLDRHGHAHTCFSRT*RNLGVL
Trigger: CAGGACACCCAGGTTCCGCCAGGTGCGGCTGAAACA...TGTGTGTGCATGTCCATGCCTGTCCAGGTCAGGACACCCAGGTTCCGCCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR CCA 90 bp ATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTCCAACAGCACCCAGGCGGTaGTCAGCCAGAGGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: MSTTSVLGKVAWFLLVGPTAPRR*SARGQA
Trigger: CGCTTGGCCTCTGGCTGACCACCGCCTGGGTGCTGT...TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCGTCAGCCTGCTCTGCTaGCTCTGGGACTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RPAVTEASQNPGSGPLVPVSLLC*LWDFCS
Trigger: AGAGCAAAAGTCCCAGAGCCAGCAGAGCAGGCTGAC...GGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR TCA 90 bp GTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCACTCCAGGGCCCGGTGTaGGCTGCTCAGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VTEASQNPGSGPLVPSFPLQGPV*AAQILL
Trigger: CAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAG...TGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTCAGGAAGAGGGAGAGTaGGAGTGGGACACACCGAGG +
Preference number: 4 (lower is better)
Translates to: GWVRSGRDDVHHLSTGESQEEGE*EWDTPR
Trigger: CCTCGGTGTGTCCCACTCTCACTCTCCCTCTTCCTG...ACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR TCA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCTGCAGCAGACACCCATaGCTCCAGTGCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVCSRHP*LQCTGR
Trigger: TCTGCCTGTGCACTGGAGTCATGGGTGTCTGCTGCA...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTGCAGCAGACACCCATaGCTCCAGTGCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLGQEWQRRCPPPQYWGKCSRHP*LQCTGR
Trigger: TCTGCCTGTGCACTGGAGTCATGGGTGTCTGCTGCA...CTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp TGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCATGAAAGGCCACGATaGGGCAGAGGAGTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CSHLGPQVGQGLPTLASVHERPR*GRGVRR
Trigger: CCTTCTTACTCCTCTGCCTCATCGTGGCCTTTCATG...GACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGCTGGGACTTTTGCTCTaGGGCACAGCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGLGLLL*GTAEPC
Trigger: ACAGGGCTCTGCTGTGCCTCAGAGCAAAAGTCCCAG...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR GCA 90 bp GGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGCTGCTCAGATTCTGCTaGAGGTCATACAGGATCATG +
Preference number: 4 (lower is better)
Translates to: GASGGPRPTHFSQRPLQQLLRFC*RSYRIM
Trigger: CATGATCCTGTATGACCTGCAGCAGAATCTGAGCAG...CTGCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RPAVTEASQNPGSGPLVPSLHLR*FVQGWV
Trigger: GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA...GGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TGCCTCCAGTCGCCTGCACTTGTAACTGAGAGCTGGAGGTCGTCCATAGCAGCAGGGACCCAGGAGTCCTaGCTCCAGTCGCCTGCACTT +
Preference number: 4 (lower is better)
Translates to: CLQSPALVTESWRSSIAAGTQES*LQSPAL
Trigger: AAGTGCAGGCGACTGGAGGCAGGACTCCTGGGTCCC...TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGCGACTGGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp AGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCGCAGCCACTGTGGCTTaGAGGTCGTCAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RCFVQGWVRSGRDDVHHLAATVA*RSSACS
Trigger: AGAGCAGGCTGACGACCTGCAAGCCACAGTGGCTGC...GAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGGCCAGAGACTTCTCCTaGTCCAGCAAGCGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: GLGQEWQRRCPPPQYWGKARDFS*SSKRFR
Trigger: CCGAAAGCGCTTGCTGGAGCAGGAGAAGTCTCTGGC...CTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGGCCAGAGACTTCTCCTaGTCCAGCAAGCGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGARDFS*SSKRFR
Trigger: CCGAAAGCGCTTGCTGGAGCAGGAGAAGTCTCTGGC...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTTCCTGCCAGCACCAGTaGCCAGCCGGCCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPSCQHQ*PAGQRL
Trigger: AAGTCTCTGGCCGGCTGGGCACTGGTGCTGGCAGGA...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp ATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACACAGGCAGACGATCTTaGCCCACATGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: MEFTCSRSFRCFSRTWRNTGRRS*PTWCPA
Trigger: TGCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGT...GTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR GCA 90 bp AGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCGCTTGCGCTGATGCCTaGGGGCAGCATGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: RCFVQGWVRSGRDDVHHLACADA*GQHETP
Trigger: AGGAGTCTCATGCTGCCCGCAGGCATCAGCGCAAGC...GAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GCCACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTCATACAGGATCATGTaGATCTTGGAGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: ATSSPAPASYPVLQLGQRSYRIM*ILEMST
Trigger: GGTGGACATCTCCAAGATGCACATGATCCTGTATGA...CCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTAAGTGTGTCTGAAAGGTaGCCAGTGGCATTAACAGCC +
Preference number: 4 (lower is better)
Translates to: HLQPRPSLIPSSSARPAVSVSER*PVALTA
Trigger: GGCTGTTAATGCCACTGGGCACCTTTCAGACACACT...TACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCTGCTGGCTGGGTTCTaGAAGCTGCCTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SGRDDVHHLSTGESSLVPLLAGF*KLPRPQ
Trigger: CTGGGGCCGAGGCAGCTTCCAGAACCCAGCCAGCAG...AGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp TCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAAGCTACTTGGACTGCTaGCTGGGTTCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SARPAVTEASQNPGSGPLSYLDC*LGSGSC
Trigger: GCAGCTTCCAGAACCCAGCCAGCAGTCCAAGTAGCT...TAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GTGGGACACACCGAGGTGCAGACAGAAACCGGTGGGCAGAAGTGGGAGACAGGGCCTCCTCGTGGGTCCTaGAGAGACAGAGAGACTGAT +
Preference number: 4 (lower is better)
Translates to: VGHTEVQTETGGQKWETGPPRGS*RDRETD
Trigger: ATCAGTCTCTCTGTCTCTCCAGGACCCACGAGGAGG...CCCTGTCTCCCACTTCTGCCCACCGGTTTCTGTCTGCACCTCGGTGTGTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR CCA 90 bp CCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGGACCATGTTCCCACCTaGGGCCTCAGGTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PLVLALEVLCSGLGQEWQDHVPT*GLRWAK
Trigger: CTTGGCCCACCTGAGGCCCCAGGTGGGAACATGGTC...CTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTAGCCTCCCAGAATCCTaGATCCGGGCCCCTAGTACC +
Preference number: 4 (lower is better)
Translates to: KPTHSKPGPPLVLALEVLSLPES*IRAPST
Trigger: GGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCT...AAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCGTGGGTCCAGCTACTTaGACTGCTGGCTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVVGPAT*TAGWVL
Trigger: CAGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCAC...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp TTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCTGGGTCTGGGTGTCCTGACCTaGACAGGCATGGACATGCAC +
Preference number: 4 (lower is better)
Translates to: FTCSRSFRCFSRTWRNLGLGVLT*TGMDMH
Trigger: GTGCATGTCCATGCCTGTCCAGGTCAGGACACCCAG...ACCCAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR TCA 90 bp TCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATCTCCAGGGCCCGGTGTaGGCTGCTCAGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLHLRCFVQGWVRSGRDDLQGPV*AAQILL
Trigger: CAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAG...ATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAAGTCCAGCCCCGAACTaGGTCCTTTCCTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: GALFRAGSGVAETMSTTSSPAPN*VLSSRQ
Trigger: CTGTCTGGAGGAAAGGACTCAGTTCGGGGCTGGACT...TGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR TCA 90 bp GCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCATATGCAGAGTGGGGGTaGCCATGTTCCCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: ALEVLCSGLGQEWQRRCPYAEWG*PCSHLG
Trigger: CCCCAGGTGGGAACATGGTCACCCCCACTCTGCATA...TGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGTATGCAGAGTGGGGGTaGCCATGTTCCCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: VRSGRDDVHHLSTGESSLYAEWG*PCSHLG
Trigger: CCCCAGGTGGGAACATGGTCACCCCCACTCTGCATA...CAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp TGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTTATGCAGAGTGGGGGTaGCCATGTTCCCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: CFVQGWVRSGRDDVHHLSYAEWG*PCSHLG
Trigger: CCCCAGGTGGGAACATGGTCACCCCCACTCTGCATA...ACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GACGATCTTGCCCCACATGGTGCCCGGCACCACGTCACCATAGCCGATGGTCAGCGATGGTCAGGAATGTaGTGGGGATCAGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: DDLAPHGARHHVTIADGQRWSGM*WGSAKV
Trigger: CACTTTGGCTGATCCCCATCACATTCCTGACCATCG...CTGACCATCGGCTATGGTGACGTGGTGCCGGGCACCATGTGGGGCAAGATCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR TCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGTGCCTGCGGGCAGCATaGGACTCCTTCCTGCGAGTA +
Preference number: 4 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVCLRAA*DSFLRV
Trigger: TACTCGCAGGAAGGAGTCTCATGCTGCCCGCAGGCA...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp CACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACTGCCTGCGGGCAGCATaGGACTCCTTCCTGCGAGTA +
Preference number: 4 (lower is better)
Translates to: HLRCFVQGWVRSGRDDVHCLRAA*DSFLRV
Trigger: TACTCGCAGGAAGGAGTCTCATGCTGCCCGCAGGCA...GTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTGGAAGCGGACTTGATTaGGAGCGCCGATGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGGSGLD*ERRCCG
Trigger: ACCGCAGCATCGGCGCTCTCAATCAAGTCCGCTTCC...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGGAAGCGGACTTGATTaGGAGCGCCGATGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: AETMSTTSVLGKVAWFLLGSGLD*ERRCCG
Trigger: ACCGCAGCATCGGCGCTCTCAATCAAGTCCGCTTCC...GAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCATGGCGGAAGCGGACTTaGTTGAGAGCGCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: VTEASQNPGSGPLVPSFPWRKRT*LRAPML
Trigger: CAGCATCGGCGCTCTCAATCAAGTCCGCTTCCGCCA...TGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTGGGCCCGGTGTGAGCTaGTCAGATTCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CFVQGWVRSGRDDVHHLSGPGVS*SDSAAG
Trigger: ACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCC...ACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp AGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGGCTGGGTTCTGGAAGCTaGCTCGGCCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RVFLMRVCRVGVTMFPPGLGSGS*LGPRAV
Trigger: CACTGCCCTGGGGCCGAGGCAGCTTCCAGAACCCAG...CCCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTATCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SARPAVTEASQNPGSGPLSLHLR*FVQGWV
Trigger: GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA...TAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGCAGCCACTGTGGCTTaGAGGTCGTCAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVAATVA*RSSACS
Trigger: AGAGCAGGCTGACGACCTGCAAGCCACAGTGGCTGC...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTGCTTCCAATGCCAGTTCCTaGCAGCACCAGTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PACQSVSPGPGVSCSDSASNASS*QHQCPA
Trigger: GGCTGGGCACTGGTGCTGGCAGGAACTGGCATTGGA...AGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR GCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTTCCAATGCCAGTTCCTaGCAGCACCAGTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGSNASS*QHQCPA
Trigger: GGCTGGGCACTGGTGCTGGCAGGAACTGGCATTGGA...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGACAGGCAGACGATCTTaGCCCACATGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LFRAGSGVAETMSTTSVLTGRRS*PTWCPA
Trigger: TGCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGT...CAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAACAGGCAGACGATCTTaGCCCACATGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVTGRRS*PTWCPA
Trigger: TGCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGT...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGCTTGCGCTGATGCCTaGGGGCAGCATGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVACADA*GQHETP
Trigger: AGGAGTCTCATGCTGCCCGCAGGCATCAGCGCAAGC...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCTGGCACATGGACACGTGTaGATACAAAGCGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: EFTCSRSFRCFSRTWRNLAHGHV*IQSGPH
Trigger: GTGAGGGCCGCTTTGTATGCACACGTGTCCATGTGC...CAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR GCA 90 bp GGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGGACAGGCATGGACATaGACACACACAGCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: GALFRAGSGVAETMSTTSGQAWT*THTAVQ
Trigger: CTGCACGGCTGTGTGTGTGCATGTCCATGCCTGTCC...TGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR GCA 90 bp GAGCTGGAGGTCGTCCATAGCAGCATAGTGAGAGTGTTTTTGATGAGGGTATGCAGCTCCAGCACGATCTaGGCCGCCTGCCGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: ELEVVHSSIVRVFLMRVCSSSTI*AACRPV
Trigger: GACCGGGCGGCAGGCGGCGCAGATCGTGCTGGAGCT...GCATACCCTCATCAAAAACACTCTCACTATGCTGCTATGGACGACCTCCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648319.1
CDS-3UTR GCA 90 bp GTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGTGGCATTAACAGCCTaGCTCTCGGCCACGGACAGC +
Preference number: 4 (lower is better)
Translates to: VTEASQNPGSGPLVPSFPVALTA*LSATDS
Trigger: GCTGTCCGTGGCCGAGAGGCAGGCTGTTAATGCCAC...TGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGAGCTACTTGGACTGCTaGCTGGGTTCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGSYLDC*LGSGSC
Trigger: GCAGCTTCCAGAACCCAGCCAGCAGTCCAAGTAGCT...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTGGGCTGGGTCAGGAGTaGCAGAGACGATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPGLGQE*QRRCPP
Trigger: TGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGGGCTGGGTCAGGAGTaGCAGAGACGATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: AETMSTTSVLGKVAWFLLGLGQE*QRRCPP
Trigger: TGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC...GAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGCFVQG*VRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAAGCCAGGGCCCCCTTTaGTCCTTGCACTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVSQGPL*SLHLRC
Trigger: GCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTAGCCAGGGCCCCCTTTaGTCCTTGCACTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGSQGPL*SLHLRC
Trigger: GCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTAGCCTCCCAGAATCCTaGATCCGGGCCCCTAGTACC +
Preference number: 4 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPSLPES*IRAPST
Trigger: GGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCT...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCAACAGGGCAGCCACTGTaGCTTGCAGGTCGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALEVLCSGLGQEWQRRCPTGQPL*LAGRQP
Trigger: AGGCTGACGACCTGCAAGCCACAGTGGCTGCCCTGT...TGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACGATCTTGCCCCACATaGTGCCCGGCACCACGTCAC +
Preference number: 4 (lower is better)
Translates to: RCPPWSSLVPGASGVSAARSCPT*CPAPRH
Trigger: GTGACGTGGTGCCGGGCACCATGTGGGGCAAGATCG...TGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CCA 90 bp TTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCGATCTTGCCCCACATaGTGCCCGGCACCACGTCAC +
Preference number: 4 (lower is better)
Translates to: LHLRCFVQGWVRSGRDDVRSCPT*CPAPRH
Trigger: GTGACGTGGTGCCGGGCACCATGTGGGGCAAGATCG...GACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGTGTTTCAGCCGCACCTaGCGGAACGCGTTGATGGCG +
Preference number: 4 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVCFSRT*RNALMA
Trigger: CGCCATCAACGCGTTCCGCCAGGTGCGGCTGAAACA...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACTGTTTCAGCCGCACCTaGCGGAACGCGTTGATGGCG +
Preference number: 4 (lower is better)
Translates to: HLRCFVQGWVRSGRDDVHCFSRT*RNALMA
Trigger: CGCCATCAACGCGTTCCGCCAGGTGCGGCTGAAACA...GTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTCTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KPTHSKPGPPLVLALEVLLGKVA*FLLVGP
Trigger: TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAG...AAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTGCCATCAAGGGTCAGTaGAGGGGAGAGGGTACACCA +
Preference number: 4 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGAIKGQ*RGEGTP
Trigger: TGGTGTACCCTCTCCCCTTCACTGACCCTTGATGGC...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR TCA 90 bp TTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCTCGGCCAGCGGTAACTaGAGCCTCCCAGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLRCFVQGWVRSGRDDVSASGN*SLPESW
Trigger: CCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGA...GACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp CAATCTGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTGCTGCAGGTCATGGAACCTGGGTGTCCTaGCCTGGACAGGCATGGACA +
Preference number: 4 (lower is better)
Translates to: QSVSPGPGVSCSDSAAGHGTWVS*PGQAWT
Trigger: TGTCCATGCCTGTCCAGGTCAGGACACCCAGGTTCC...ATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR TCA 90 bp AAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGGACCTCTTTGGCATaGAAGGCCACGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KPTHSKPGPPLVLALEVLWTSLA*KATMRQ
Trigger: CTGCCTCATCGTGGCCTTTCATGCCAAAGAGGTCCA...AAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGCCCGTTGTCGGTCATaGACAGCTGGACCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VRSGRDDVHHLSTGESSLARCRS*TAGPLW
Trigger: CCAAAGAGGTCCAGCTGTTCATGACCGACAACGGGC...CAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp TGCCTCCAGTCGCCTGCACTTGTAACTGAGAGCTGGAGGTCGTCCATAGCAGCATGCCTGCGGGCAGCATaGGACTCCTTCCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: CLQSPALVTESWRSSIAACLRAA*DSFLFG
Trigger: ACCAAAGAGGAAGGAGTCTCATGCTGCCCGCAGGCA...TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGCGACTGGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR GCA 90 bp AGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCCTGGGTTCTGGAAGCTaGCTCGGCCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RIMCILEMSTMEFTCSRSLGSGS*LGPRAV
Trigger: CACTGCCCTGGGGCCGAGGCAGCTTCCAGAACCCAG...GCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR GCA 90 bp AAAGTAGCCTGGTTCCTCCTCGTGGGTCCTGGAGAGACAGAGAGACTGATGGAGTGGGACACACCGAGGTaGAGACAGAAACCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KVAWFLLVGPGETERLMEWDTPR*RQKPVG
Trigger: GCCCACCGGTTTCTGTCTGCACCTCGGTGTGTCCCA...CTCCATCAGTCTCTCTGTCTCTCCAGGACCCACGAGGAGGAACCAGGCTACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR GCA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGCCACCAGGTGCTCTCTaGAGCTCTGGAAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGPPGAL*SSGKMV
Trigger: CACCATTTTTCCAGAGCTGCAGAGAGCACCTGGTGG...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCGCAGCCACTGTGGCTTaGAGGTCGTCAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LHLRCFVQGWVRSGRDDVAATVA*RSSACS
Trigger: AGAGCAGGCTGACGACCTGCAAGCCACAGTGGCTGC...GACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGCCAGAGACTTCTCCTaGTCCAGCAAGCGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVARDFS*SSKRFR
Trigger: CCGAAAGCGCTTGCTGGAGCAGGAGAAGTCTCTGGC...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCTCTTGCCCCACATGGTaGCCGGCACCACGTCACCAT +
Preference number: 4 (lower is better)
Translates to: LHLRCFVQGWVRSGRDDVSCPTW*PAPRHH
Trigger: ATGGTGACGTGGTGCCGGGCACCATGTGGGGCAAGA...GACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTAGCTACTTGGACTGCTaGCTGGGTTCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KPTHSKPGPPLVLALEVLSYLDC*LGSGSC
Trigger: GCAGCTTCCAGAACCCAGCCAGCAGTCCAAGTAGCT...AAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTACCCTCACCAGCTACTTaGACTGCTGGCTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVPSPAT*TAGWVL
Trigger: CAGAACCCAGCCAGCAGTCCAAGTAGCTGGTGAGGG...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR CCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTCCTGGTTCCTCCTCGTaGGTCCTGGAGAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGPGSSS*VLERQR
Trigger: TCTCTGTCTCTCCAGGACCCACGAGGAGGAACCAGG...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR CCA 90 bp CCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PTPSQGPLWSLHLRCFVQCFVQG*VRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA...CTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp ATGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTTGGAGATGTCCACCATaGAGTTCACTTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: MFPPGASGGPRPTHFSQRWRCPP*SSLVPG
Trigger: TCCGGGAACAAGTGAACTCCATGGTGGACATCTCCA...ACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGTGGGTCCAGCTACTTaGACTGCTGGCTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVVGPAT*TAGWVL
Trigger: CAGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCAC...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGCCTGGTTCCTCCTCGTaGGTCCAGCTACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVPGSSS*VQLLGL
Trigger: CAGTCCAAGTAGCTGGACCCACGAGGAGGAACCAGG...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPLGKVA*FLLVGP
Trigger: TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAG...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp ATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTCCACTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: MSTTSVLGKVAWFLLVGPLGKVA*FLLVGP
Trigger: TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAG...TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ALEVLCSGLGQEWQRRCPLGKVA*FLLVGP
Trigger: TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAG...TGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp TCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTATGTTCATGTAAAGCTTaGCCACGAACCAGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: SARPAVTEASQNPGSGPLCSCKA*PRTSGG
Trigger: TCCGCCACTGGTTCGTGGCCAAGCTTTACATGAACA...TAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTTTCAGCCGCACCTaGCGGAACCTGGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: VLALEVLCSGLGQEWQRRCFSRT*RNLDRH
Trigger: ATGCCTGTCCAGGTTCCGCCAGGTGCGGCTGAAACA...TCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR TCA 90 bp ATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTCCAGCCTGCACTTGTAACTaGGAGCTGGAGGTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: MSTTSVLGKVAWFLLVGPACTCN*ELEVVH
Trigger: ATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGC...TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GAGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGTCGGCCAGCGGTAACTaGAGCCTCCCAGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: ESVFDEGMQSGGDHVPTWSASGN*SLPESW
Trigger: CCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGA...CCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp AGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCATGCAGCAGACACCCATaGCTCCAGTGCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RCPPWSSLVPGASGVSAACSRHP*LQCTGR
Trigger: TCTGCCTGTGCACTGGAGTCATGGGTGTCTGCTGCA...TGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR GCA 90 bp GAGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGGGGCCCGGTGTGAGCTaGTCAGATTCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ESVFDEGMQSGGDHVPTWGPGVS*SDSAAG
Trigger: ACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCC...CCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCACCACCAGGTGCTCTCTaGAGCTCTGGAAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: GALFRAGSGVAETMSTTSPPGAL*SSGKMV
Trigger: CACCATTTTTCCAGAGCTGCAGAGAGCACCTGGTGG...TGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCTTCCGGCTTGCGCTGATGCCTaGGGGCAGCATGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: HVHLGDVHHGVHLFPELPACADA*GQHETP
Trigger: AGGAGTCTCATGCTGCCCGCAGGCATCAGCGCAAGC...CGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR GCA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGCACATGGACACGTGTaGATACAAAGCGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVAHGHV*IQSGPH
Trigger: GTGAGGGCCGCTTTGTATGCACACGTGTCCATGTGC...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR CCA 90 bp TTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGAGCTACTTGGACTGCTaGCTGGGTTCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LFRAGSGVAETMSTTSVLSYLDC*LGSGSC
Trigger: GCAGCTTCCAGAACCCAGCCAGCAGTCCAAGTAGCT...CAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGAGCTACTTGGACTGCTaGCTGGGTTCTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VRSGRDDVHHLSTGESSLSYLDC*LGSGSC
Trigger: GCAGCTTCCAGAACCCAGCCAGCAGTCCAAGTAGCT...CAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTCTGGGGAAAGTAGCCTaGTTCCTCCTCGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RDDVHHLSTGESSLVPPRLGKVA*FLLVGP
Trigger: AGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAG...ACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR CCA 90 bp ATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTCCATGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: MSTTSVLGKVAWFLLVGPCFVQG*VRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA...TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTGTGGGTCCAGCTACTTaGACTGCTGGCTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SGRDDVHHLSTGESSLVPVGPAT*TAGWVL
Trigger: CAGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCAC...AGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp TCTGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTGCTGCAGGTCATACACCTGGTTCCTCCTCGTaGGTCCAGCTACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: SVSPGPGVSCSDSAAGHTPGSSS*VQLLGL
Trigger: CAGTCCAAGTAGCTGGACCCACGAGGAGGAACCAGG...TGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR CCA 90 bp AGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTGGTTCCTCCTCGTaGGTCCAGCTACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: SGRDDVHHLSTGESSLVPPGSSS*VQLLGL
Trigger: CAGTCCAAGTAGCTGGACCCACGAGGAGGAACCAGG...AGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACTGCTCTGCTGGCTCTaGGACTTTTGCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: ALEVLCSGLGQEWQRRCPLLCWL*DFCSEA
Trigger: TGCCTCAGAGCAAAAGTCCCAGAGCCAGCAGAGCAG...TGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR TCA 90 bp GGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTTTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GWVRSGRDDVHHLSTGESFGPCT*GALFRA
Trigger: AGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAA...ACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp AGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCTGCCTGCGGGCAGCATaGGACTCCTTCCTGCGAGTA +
Preference number: 4 (lower is better)
Translates to: RIMCILEMSTMEFTCSRSCLRAA*DSFLRV
Trigger: TACTCGCAGGAAGGAGTCTCATGCTGCCCGCAGGCA...GCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR TCA 90 bp GTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCATGAAAGGCCACGATaGGGCAGAGGAGTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: VAETMSTTSVLGKVAWFLHERPR*GRGVRR
Trigger: CCTTCTTACTCCTCTGCCTCATCGTGGCCTTTCATG...GAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp AGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACGCGTCTGCTCAGATTCTGCTaGAGGTCATACAGGATCATG +
Preference number: 4 (lower is better)
Translates to: SSLVPGASGVSAAPGGTRLLRFC*RSYRIM
Trigger: CATGATCCTGTATGACCTGCAGCAGAATCTGAGCAG...ACGCGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR GCA 90 bp TTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCTGGGTCTGCTCAGATTCTGCTaGAGGTCATACAGGATCATG +
Preference number: 4 (lower is better)
Translates to: FTCSRSFRCFSRTWRNLGLLRFC*RSYRIM
Trigger: CATGATCCTGTATGACCTGCAGCAGAATCTGAGCAG...ACCCAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR GCA 90 bp AGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCGGGCCCGGTGTGAGCTaGTCAGATTCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RIMCILEMSTMEFTCSRSGPGVS*SDSAAG
Trigger: ACCTGCAGCAGAATCTGAGCAGCTCACACCGGGCCC...GCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR GCA 90 bp TCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATCTTAGCCACATAGGGTaGTGGCCACAGGAACCCTTC +
Preference number: 4 (lower is better)
Translates to: SLHLRCFVQGWVRSGRDDLSHIG*WPQEPF
Trigger: GAAGGGTTCCTGTGGCCAGCACCCTATGTGGCTAAG...ATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR GCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTTCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPSLHLR*FVQGWV
Trigger: GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTTCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CFVQGWVRSGRDDVHHLSSLHLR*FVQGWV
Trigger: GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA...ACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCCACCAGGTGCTCTCTaGAGCTCTGGAAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: GVAETMSTTSVLGKVAWFPPGAL*SSGKMV
Trigger: CACCATTTTTCCAGAGCTGCAGAGAGCACCTGGTGG...GAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCCACCAGGTGCTCTCTaGAGCTCTGGAAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPPPGAL*SSGKMV
Trigger: CACCATTTTTCCAGAGCTGCAGAGAGCACCTGGTGG...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTGCTGAACCACAGCATCTCTaGATGCAGCACCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: PACQSVSPGPGVSCSDSAEPQHL*MQHHES
Trigger: GGACTCATGGTGCTGCATGCAGAGATGCTGTGGTTC...AGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR GCA 90 bp GCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGAACCACAGCATCTCTaGATGCAGCACCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: AETMSTTSVLGKVAWFLLEPQHL*MQHHES
Trigger: GGACTCATGGTGCTGCATGCAGAGATGCTGTGGTTC...GAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGGGCAGACAGAAACCGGTaGGCAGAAGTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: RVFLMRVCRVGVTMFPPGADRNR*AEVGDR
Trigger: CCTGTCTCCCACTTCTGCCCACCGGTTTCTGTCTGC...CCCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR CCA 90 bp TTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCTGCTTTGTTCAGGGCTaGGTCAGGAGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LHLRCFVQGWVRSGRDDVCFVQG*VRSGRD
Trigger: GTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCA...GACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCCTTGTAACTGAGAGCTaGAGGTCGTCCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RCFVQGWVRSGRDDVHHLLVTES*RSSIAA
Trigger: TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAG...GAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGGAGATGTCCACCATaGAGTTCACTTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KPTHSKPGPPLVLALEVLWRCPP*SSLVPG
Trigger: TCCGGGAACAAGTGAACTCCATGGTGGACATCTCCA...AAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCTGGGATCATGTGCATCTTaGAGATGTCCACCATGGAGT +
Preference number: 4 (lower is better)
Translates to: EFTCSRSFRCFSRTWRNLGSCAS*RCPPWS
Trigger: ACTCCATGGTGGACATCTCCAAGATGCACATGATCC...CAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR CCA 90 bp GTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGGATCATGTGCATCTTaGAGATGTCCACCATGGAGT +
Preference number: 4 (lower is better)
Translates to: VQGWVRSGRDDVHHLSTGGSCAS*RCPPWS
Trigger: ACTCCATGGTGGACATCTCCAAGATGCACATGATCC...CCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTAAGACTCCTTCCTCTTTaGTATACTGGATATCCATCA +
Preference number: 4 (lower is better)
Translates to: HLQPRPSLIPSSSARPAVRLLPL*YTGYPS
Trigger: TGATGGATATCCAGTATACCAAAGAGGAAGGAGTCT...TACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598836.1
3UTR CAA 72 bp CATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTaGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTG +
Preference number: 4 (lower is better)
Translates to: HVHLGDVHHGVH*FPELPVFQPHL
Trigger: CAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR TCA 90 bp GAGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGGCCTGCACTTGTAACTaGGAGCTGGAGGTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: ESVFDEGMQSGGDHVPTWACTCN*ELEVVH
Trigger: ATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGC...CCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp AGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTAAGAGCAGAGGCTGGTaGGTTACACTTCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SGRDDVHHLSTGESSLVPKSRGW*VTLLPP
Trigger: GGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTT...AGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp TGTGCATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCTTCCGGTCTGCATGCAGCACCATaGGTCCAATGCCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CASWRCPPWSSLVPGASGLHAAP*VQCQFL
Trigger: CAGGAACTGGCATTGGACTCATGGTGCTGCATGCAG...ACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR TCA 90 bp AGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGGCTGCATGCAGCACCATaGGTCCAATGCCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RVFLMRVCRVGVTMFPPGLHAAP*VQCQFL
Trigger: CAGGAACTGGCATTGGACTCATGGTGCTGCATGCAG...CCCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp AGAGAGGTGACTTGGACATGGGTGCACATGGACACGTGTGCATACAAAGCGGCCCGATGGTCAGGAATGTaGTGGGGATCAGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: REVTWTWVHMDTCAYKAARWSGM*WGSAKV
Trigger: CACTTTGGCTGATCCCCATCACATTCCTGACCATCG...GGCCGCTTTGTATGCACACGTGTCCATGTGCACCCATGTCCAAGTCACCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR TCA 90 bp AGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCGATGGTCAGGAATGTaGTGGGGATCAGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGRDDVHHLSTGESSLVPRWSGM*WGSAKV
Trigger: CACTTTGGCTGATCCCCATCACATTCCTGACCATCG...AGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GAGCTGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGTGCCTGCGGGCAGCATaGGACTCCTTCCTGCGAGTA +
Preference number: 4 (lower is better)
Translates to: ELLRFCCRSYRIMCILEMCLRAA*DSFLRV
Trigger: TACTCGCAGGAAGGAGTCTCATGCTGCCCGCAGGCA...CATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR GCA 90 bp CCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGCTGCTCAGATTCTGCTaGAGGTCATACAGGATCATG +
Preference number: 4 (lower is better)
Translates to: PTPSQGPLWSLHLRCFVQLLRFC*RSYRIM
Trigger: CATGATCCTGTATGACCTGCAGCAGAATCTGAGCAG...CTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCAGAGCTGCTCAGATTCTaGTGCAGGTCATACAGGATC +
Preference number: 4 (lower is better)
Translates to: ALEVLCSGLGQEWQRRCPELLRF*CRSYRI
Trigger: GATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC...TGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCGAGCTGCTCAGATTCTaGTGCAGGTCATACAGGATC +
Preference number: 4 (lower is better)
Translates to: VAETMSTTSVLGKVAWFLELLRF*CRSYRI
Trigger: GATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC...GAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTGAGCTGCTCAGATTCTaGTGCAGGTCATACAGGATC +
Preference number: 4 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGELLRF*CRSYRI
Trigger: GATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCAGTGTGTCTGAAAGGTaGCCAGTGGCATTAACAGCC +
Preference number: 4 (lower is better)
Translates to: VAETMSTTSVLGKVAWFLSVSER*PVALTA
Trigger: GGCTGTTAATGCCACTGGGCACCTTTCAGACACACT...GAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTGACAGAGACATTGGATaGACAGCCAGACAATGTGCC +
Preference number: 4 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPDRDIG*TARQCA
Trigger: GGCACATTGTCTGGCTGTCCATCCAATGTCTCTGTC...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR CCA 90 bp ATGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTTTTAGACAGAGACATTaGATGGACAGCCAGACAATG +
Preference number: 4 (lower is better)
Translates to: MFPPGASGGPRPTHFSQRFRQRH*MDSQTM
Trigger: CATTGTCTGGCTGTCCATCCAATGTCTCTGTCTAAA...ACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR CCA 90 bp GCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCCTTGTAACTGAGAGCTaGAGGTCGTCCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AETMSTTSVLGKVAWFLLLVTES*RSSIAA
Trigger: TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAG...GAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTTGGAGATGTCCACCATaGAGTTCACTTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGWRCPP*SSLVPG
Trigger: TCCGGGAACAAGTGAACTCCATGGTGGACATCTCCA...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp TCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATTTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLHLRCFVQGWVRSGRDDFGPCT*GALFRA
Trigger: AGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAA...ATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCATGGTCTGTACTTTGTaGCACACACCTCTACTCACC +
Preference number: 4 (lower is better)
Translates to: VAETMSTTSVLGKVAWFLMVCTL*HTPLLT
Trigger: GGTGAGTAGAGGTGTGTGTCACAAAGTACAGACCAT...GAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR GCA 90 bp TGCCTCCAGTCGCCTGCACTTGTAACTGAGAGCTGGAGGTCGTCCATAGCAGCACTGCTCAGATTCTGCTaGAGGTCATACAGGATCATG +
Preference number: 4 (lower is better)
Translates to: CLQSPALVTESWRSSIAALLRFC*RSYRIM
Trigger: CATGATCCTGTATGACCTGCAGCAGAATCTGAGCAG...TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGCGACTGGAGGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp ATACCCAGTTCTTCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGAGAGCTGCTCAGATTCTaGTGCAGGTCATACAGGATC +
Preference number: 4 (lower is better)
Translates to: IPSSSARPAVTEASQNPGELLRF*CRSYRI
Trigger: GATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC...TCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGAAGAACTGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp TCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATCTTGTAACTGAGAGCTaGAGGTCGTCCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLHLRCFVQGWVRSGRDDLVTES*RSSIAA
Trigger: TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAG...ATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCGGATCATGTGCATCTTaGAGATGTCCACCATGGAGT +
Preference number: 4 (lower is better)
Translates to: GVAETMSTTSVLGKVAWFGSCAS*RCPPWS
Trigger: ACTCCATGGTGGACATCTCCAAGATGCACATGATCC...GAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp TTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCACAGCACCCAGGCGGTaGTCAGCCAGAGGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: FITKIRAEAGELHFFLPTTAPRR*SARGQA
Trigger: CGCTTGGCCTCTGGCTGACCACCGCCTGGGTGCTGT...GGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp GTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGACACACAGACACACGATaGGCTTTGTCACACACAATG +
Preference number: 4 (lower is better)
Translates to: VLALEVLCSGLGQEWQRRHTDTR*ALSHTM
Trigger: CATTGTGTGTGACAAAGCCCATCGTGTGTCTGTGTG...TCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR TCA 90 bp GAGCTGGAGGTCGTCCATAGCAGCATAGTGAGAGTGTTTTTGATGAGGGTATGCTGGACCTCTTTGGCATaGAAGGCCACGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ELEVVHSSIVRVFLMRVCWTSLA*KATMRQ
Trigger: CTGCCTCATCGTGGCCTTTCATGCCAAAGAGGTCCA...GCATACCCTCATCAAAAACACTCTCACTATGCTGCTATGGACGACCTCCAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGCATGAGACTCCTTCCTaGGAGTATGTTTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: PTPSQGPLWSLHLRCFVQHETPS*EYVCRT
Trigger: TGTTCTACAAACATACTCGCAGGAAGGAGTCTCATG...CTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCATCATACAGGATCATGTaGATCTTGGAGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: VTEASQNPGSGPLVPSFPSYRIM*ILEMST
Trigger: GGTGGACATCTCCAAGATGCACATGATCCTGTATGA...TGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp GGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTTCATACAGGATCATGTaGATCTTGGAGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: GRDDVHHLSTGESSLVPPSYRIM*ILEMST
Trigger: GGTGGACATCTCCAAGATGCACATGATCCTGTATGA...AGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp ATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTCCATCATACAGGATCATGTaGATCTTGGAGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: MSTTSVLGKVAWFLLVGPSYRIM*ILEMST
Trigger: GGTGGACATCTCCAAGATGCACATGATCCTGTATGA...TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCGGCGCCCCTAAATCCTaGACGCACGGCGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LTFITKIRAEAGELHFFLGAPKS*THGGPR
Trigger: GCGGGGCCCGCCGTGCGTGCAGGATTTAGGGGCGCC...GAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648319.1
CDS-3UTR CCA 90 bp GAGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGCTTGTAACTGAGAGCTaGAGGTCGTCCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ESVFDEGMQSGGDHVPTWLVTES*RSSIAA
Trigger: TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAG...CCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp GAGCTGGAGGTCGTCCATAGCAGCATAGTGAGAGTGTTTTTGATGAGGGTATGCAAGAGCAGAGGCTGGTaGGTTACACTTCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ELEVVHSSIVRVFLMRVCKSRGW*VTLLPP
Trigger: GGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTT...GCATACCCTCATCAAAAACACTCTCACTATGCTGCTATGGACGACCTCCAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp ATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCAGGGACAGCCAGACAATGTaGCCAGGACAGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ITKIRAEAGELHFFLPTRDSQTM*PGQAER
Trigger: TCTCTCTGCCTGTCCTGGGCACATTGTCTGGCTGTC...CCTGGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR GCA 90 bp CCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTGCTCATGAGACTCCTTCCTaGGAGTATGTTTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: PACQSVSPGPGVSCSDSAHETPS*EYVCRT
Trigger: TGTTCTACAAACATACTCGCAGGAAGGAGTCTCATG...AGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CCA 90 bp CGGTGTGAGCTGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTTGTGGAGATGTCCACCATaGAGTTCACTTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RCELLRFCCRSYRIMCILWRCPP*SSLVPG
Trigger: TCCGGGAACAAGTGAACTCCATGGTGGACATCTCCA...CAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTCACACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
3UTR CAA 72 bp CTGGAGGTCGTCCATAGCAGCATAGTGAGAGTGTTTTaGATGAGGGTATGCAGAGTGGGGGTGACCATGTTC +
Preference number: 4 (lower is better)
Translates to: LEVVHSSIVRVF*MRVCRVGVTMF
Trigger: GAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCTCACTATGCTGCTATGGACGACCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp ACTCCTTCCTGCGAGTATGTTTGTAGAACATCCAGGCTTCTTGTAGCACTCGGGGAGCTGCTCAGATTCTaGTGCAGGTCATACAGGATC +
Preference number: 4 (lower is better)
Translates to: TPSCEYVCRTSRLLVALGELLRF*CRSYRI
Trigger: GATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC...CCCGAGTGCTACAAGAAGCCTGGATGTTCTACAAACATACTCGCAGGAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR GCA 90 bp CTGCTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTTGAGCTGCTCAGATTCTaGTGCAGGTCATACAGGATC +
Preference number: 4 (lower is better)
Translates to: LLQVIQDHVHLGDVHHGVELLRF*CRSYRI
Trigger: GATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC...AACTCCATGGTGGACATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CCA 90 bp GGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGATCTCTTTGGTATACTaGATATCCATCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GLGQEWQRRCPPPQYWGKISLVY*ISIMKL
Trigger: CAACTTCATGATGGATATCCAGTATACCAAAGAGAT...CTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAAACTCCTTCATCTCTTTaGTATACTGGATATCCATCA +
Preference number: 4 (lower is better)
Translates to: HGVHLFPELPVFQPHLAETPSSL*YTGYPS
Trigger: TGATGGATATCCAGTATACCAAAGAGATGAAGGAGT...TTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CCA 90 bp AAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTACTCCTTCATCTCTTTaGTATACTGGATATCCATCA +
Preference number: 4 (lower is better)
Translates to: KPTHSKPGPPLVLALEVLTPSSL*YTGYPS
Trigger: TGATGGATATCCAGTATACCAAAGAGATGAAGGAGT...AAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCGGATCATGTGCATCTTaGAGATGTCCACCATGGAGT +
Preference number: 4 (lower is better)
Translates to: RIMCILEMSTMEFTCSRSGSCAS*RCPPWS
Trigger: ACTCCATGGTGGACATCTCCAAGATGCACATGATCC...GCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CCA 90 bp CACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCTTTGTCACACACAATaGTCTGTACTTTGTGACACA +
Preference number: 4 (lower is better)
Translates to: HLRCFVQGWVRSGRDDVHLCHTQ*SVLCDT
Trigger: TGTGTCACAAAGTACAGACCATTGTGTGTGACAAAG...GTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR TCA 90 bp TGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGTCCATTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CSDSAAGHTGSCASWRCPFGPCT*GALFRA
Trigger: AGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAA...TGGACATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR CCA 90 bp GTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCTCCTCTTTGGTATACTaGATATCCATCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VAETMSTTSVLGKVAWFLSSLVY*ISIMKL
Trigger: CAACTTCATGATGGATATCCAGTATACCAAAGAGGA...GAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR TCA 90 bp CTGGCTTTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTATGCAGAGTGGGGGTaGCCATGTTCCCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: LALTFITKIRAEAGELHFYAEWG*PCSHLG
Trigger: CCCCAGGTGGGAACATGGTCACCCCCACTCTGCATA...GAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAAAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp TTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCAAGAGCAGAGGCTGGTaGGTTACACTTCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FITKIRAEAGELHFFLPTKSRGW*VTLLPP
Trigger: GGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTT...GGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TACAGGATCATGTGCATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGTCATACAGGATCATGTaGATCTTGGAGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: YRIMCILEMSTMEFTCSRSYRIM*ILEMST
Trigger: GGTGGACATCTCCAAGATGCACATGATCCTGTATGA...CCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACATGATCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CCA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAATCTCTTTGGTATACTaGATATCCATCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVISLVY*ISIMKL
Trigger: CAACTTCATGATGGATATCCAGTATACCAAAGAGAT...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp ACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTATCTCTTTGGTATACTaGATATCCATCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TMSTTSVLGKVAWFLLVGISLVY*ISIMKL
Trigger: CAACTTCATGATGGATATCCAGTATACCAAAGAGAT...ACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp AGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTACTCCTTCATCTCTTTaGTATACTGGATATCCATCA +
Preference number: 4 (lower is better)
Translates to: SGRDDVHHLSTGESSLVPTPSSL*YTGYPS
Trigger: TGATGGATATCCAGTATACCAAAGAGATGAAGGAGT...AGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CCA 90 bp CTGGCTTTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCAGCCACATAGGGTGCTaGCCACAGGAACCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LALTFITKIRAEAGELHFSHIGC*PQEPFL
Trigger: GAGGAAGGGTTCCTGTGGCCAGCACCCTATGTGGCT...GAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAAAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR CCA 90 bp TGTGCATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCTTCCGGTACTCCTTCATCTCTTTaGTATACTGGATATCCATCA +
Preference number: 4 (lower is better)
Translates to: CASWRCPPWSSLVPGASGTPSSL*YTGYPS
Trigger: TGATGGATATCCAGTATACCAAAGAGATGAAGGAGT...ACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGATGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CCA 90 bp CTGGCTTTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCCCTGGTTCCTCCTCGTaGGTCCAGCTACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: LALTFITKIRAEAGELHFPGSSS*VQLLGL
Trigger: CAGTCCAAGTAGCTGGACCCACGAGGAGGAACCAGG...GAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAAAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp ATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCAGGCATGAGACTCCTTCCTaGGAGTATGTTTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: ITKIRAEAGELHFFLPTRHETPS*EYVCRT
Trigger: TGTTCTACAAACATACTCGCAGGAAGGAGTCTCATG...CCTGGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp TTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCTGCATGCAGCACCATaGGTCCAATGCCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LTFITKIRAEAGELHFFLLHAAP*VQCQFL
Trigger: CAGGAACTGGCATTGGACTCATGGTGCTGCATGCAG...GAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CTGGCTTTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTCCTTGCACTTGAGGTaGTTTGTTCAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LALTFITKIRAEAGELHFSLHLR*FVQGWV
Trigger: GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA...GAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAAAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp TTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCTGGCTCTGGGACTTTTaGTCTGAGGCACAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LTFITKIRAEAGELHFFLWLWDF*SEAQQS
Trigger: GCTCTGCTGTGCCTCAGAGCAAAAGTCCCAGAGCCA...GAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR CCA 90 bp ATCTTGGAGATGTCCACCATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCATCTCTTTGGTATACTaGATATCCATCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ILEMSTMEFTCSRSFRCFISLVY*ISIMKL
Trigger: CAACTTCATGATGGATATCCAGTATACCAAAGAGAT...GAAACACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTGGACATCTCCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR TCA 90 bp TTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCGATGGTCAGGAATGTaGTGGGGATCAGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LTFITKIRAEAGELHFFLRWSGM*WGSAKV
Trigger: CACTTTGGCTGATCCCCATCACATTCCTGACCATCG...GAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR TCA 90 bp TTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCTTTGGTCCTTGCACTTaGGGTGCTTTGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LTFITKIRAEAGELHFFLFGPCT*GALFRA
Trigger: AGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAA...GAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR GCA 90 bp CTGGCTTTAACATTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCCATGAGACTCCTTCCTaGGAGTATGTTTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: LALTFITKIRAEAGELHFHETPS*EYVCRT
Trigger: TGTTCTACAAACATACTCGCAGGAAGGAGTCTCATG...GAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAATGTTAAAGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS GCA 90 bp GGGTGCAGCCCACACACCACCAGCTCCAGCACGATCTGCGCCGCCTaGCGCCCGGTCAGCGCCACGCGCCAGTCCCGCAGCCCGTTGTCG +
Preference number: 5 (lower is better)
Translates to: GCSPHTTSSSTICAA*RPVSATRQSRSPLS
Trigger: CGACAACGGGCTGCGGGACTGGCGCGTGGCGCTGACCGGGCGGCAGGCGGCGCAGATCGTGCTGGAGCTGGTGGTGTGTGGGCTGCACCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599107.1
ENST00000648319.1
CDS GCA 90 bp GCCCCTAAATCCTGCACGCACGGCGGGCCCCGCACGGGCGCCGGGTaGAGCCCACACACCACCAGCTCCAGCACGATCTGCGCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: APKSCTHGGPRTGAG*SPHTTSSSTICAAC
Trigger: GCAGGCGGCGCAGATCGTGCTGGAGCTGGTGGTGTGTGGGCTGCACCCGGCGCCCGTGCGGGGCCCGCCGTGCGTGCAGGATTTAGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599107.1
ENST00000648319.1
CDS TCA 90 bp CGGCCACGGACAGCACCCAGGCGGTGGTCAGCCAGAGGCCAAGCGTaGGGCCGAGCAGCAGGCGGCCAGGGTGCGTGTTCATGTAAAGCT +
Preference number: 5 (lower is better)
Translates to: RPRTAPRRWSARGQA*GRAAGGQGACSCKA
Trigger: AGCTTTACATGAACACGCACCCTGGCCGCCTGCTGCTCGGCCTCACGCTTGGCCTCTGGCTGACCACCGCCTGGGTGCTGTCCGTGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000601549.2
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCTGGGTGTCCTGACCTGAGCGGCCCTCACGCGTaGATGGCGGCCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PELPVFQPHLAEPGCPDLSGPHA*MAASSL
Trigger: CAAGCTGCTGGCCGCCATCAACGCGTGAGGGCCGCT...CAGGTCAGGACACCCAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS GCA 90 bp CCAGTTCCTGCCAGCACCAGTGCCCAGCCGGCCAGAGACTTCTCCTaGTCCAGCAAGCGCTTTCGGCGTCTCAAGGCCCCCAGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: PVPASTSAQPARDFS*SSKRFRRLKAPRPS
Trigger: GCTTGGCCTGGGGGCCTTGAGACGCCGAAAGCGCTTGCTGGAGCAGGAGAAGTCTCTGGCCGGCTGGGCACTGGTGCTGGCAGGAACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS CCA 90 bp CTGCCCAGGGTCCCCCACCTCGCAGCACGCACAGGGCAGCCACTGTaGCTTGCAGGTCGTCAGCCTGCTCTGCTGGCTCTGGGACTTTTG +
Preference number: 5 (lower is better)
Translates to: LPRVPHLAARTGQPL*LAGRQPALLALGLL
Trigger: CAAAAGTCCCAGAGCCAGCAGAGCAGGCTGACGACCTGCAAGCCACAGTGGCTGCCCTGTGCGTGCTGCGAGGTGGGGGACCCTGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS-3UTR CAA 90 bp CTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCCAGTCCCGCAGCCCGTaGTCGGTCATGAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: LGPQVGQGLPTLASVPSSQSRSP*SVMNSW
Trigger: CCAGCTGTTCATGACCGACAACGGGCTGCGGGACTG...GCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCAGAAGCCAGGGCCCCCTTaGGTCCTTGCACTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: GASGGPRPTHFSQRPLQQKPGPP*VLALEV
Trigger: CACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTT...CTGCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCCGTGGGTCCAGCTACTaGGACTGCTGGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: LGPQVGQGLPTLASVPSSRGSSY*DCWLGS
Trigger: AGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCACG...GCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGAGCGGCCCTCACGCGTaGATGGCGGCCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGSGPHA*MAASSL
Trigger: CAAGCTGCTGGCCGCCATCAACGCGTGAGGGCCGCT...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR CAA 90 bp CTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCCCCTCCAGCGGGCTAGGGTGTGTCTaGGGGCAGAGCAAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: LGPQVGQGLPTLASVPSSGLGCV*GQSKKE
Trigger: CTCTTTCTTGCTCTGCCCCAAGACACACCCTAGCCC...GCTGGAGGGGACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS TCA 90 bp TGGGTGCACATGGACACGTGTGCATACAAAGCGGCCCTCACGCGTTaGTGGCGGCCAGCAGCTTGCGCTGATGCCTGCGGGCAGCATGAG +
Preference number: 5 (lower is better)
Translates to: WVHMDTCAYKAALTR*WRPAACADACGQHE
Trigger: CTCATGCTGCCCGCAGGCATCAGCGCAAGCTGCTGGCCGCCATCAACGCGTGAGGGCCGCTTTGTATGCACACGTGTCCATGTGCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000600408.1
ENST00000601549.2
CDS-3UTR CAA 90 bp CGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCAAGCCAGGGCCCCCTTaGGTCCTTGCACTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: RPAVTEASQNPGSGPLVPKPGPP*VLALEV
Trigger: CACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTT...GGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCGGCAGCCACTGTGGCTaGCAGGTCGTCAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVGSHCG*QVVSLL
Trigger: GAGCAGGCTGACGACCTGCAAGCCACAGTGGCTGCC...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp TTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCTGGGTCACAGGCAGACGATCTaGCCCCACATGGTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: FTCSRSFRCFSRTWRNLGHRQTI*PHMVPG
Trigger: GCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGTG...ACCCAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS-3UTR CAA 90 bp TCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTACCCCTCACCAGCTACTaGGACTGCTGGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: SARPAVTEASQNPGSGPLPLTSY*DCWLGS
Trigger: AGAACCCAGCCAGCAGTCCAAGTAGCTGGTGAGGGG...TAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600909.1
CDS-3UTR CAA 90 bp TCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAAAGCCAGGGCCCCCTTaGGTCCTTGCACTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: SARPAVTEASQNPGSGPLKPGPP*VLALEV
Trigger: CACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTT...TAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGCACAGGCAGACGATCTaGCCCCACATGGTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: PTPSQGPLWSLHLRCFVQHRQTI*PHMVPG
Trigger: GCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGTG...CTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTCACAGGCAGACGATCTaGCCCCACATGGTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: GWVRSGRDDVHHLSTGESHRQTI*PHMVPG
Trigger: GCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGTG...ACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS TCA 90 bp TCATGTAAAGCTTGGCCACGAACCAGTGGCGGAAGCGGACTTGATTaGGAGCGCCGATGCTGCGGTAGGAAGCGTTGCCTGCCGCCCGGT +
Preference number: 5 (lower is better)
Translates to: SCKAWPRTSGGSGLD*ERRCCGRKRCLPPG
Trigger: ACCGGGCGGCAGGCAACGCTTCCTACCGCAGCATCGGCGCTCTCAATCAAGTCCGCTTCCGCCACTGGTTCGTGGCCAAGCTTTACATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS GCA 90 bp TGCATGCAGCACCATGAGTCCAATGCCAGTTCCTGCCAGCACCAGTaGCCAGCCGGCCAGAGACTTCTCCTGCTCCAGCAAGCGCTTTCG +
Preference number: 5 (lower is better)
Translates to: CMQHHESNASSCQHQ*PAGQRLLLLQQALS
Trigger: CGAAAGCGCTTGCTGGAGCAGGAGAAGTCTCTGGCCGGCTGGGCACTGGTGCTGGCAGGAACTGGCATTGGACTCATGGTGCTGCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS GCA 90 bp GCCGTGCAGAGAGGTGACTTGGACATGGGTGCACATGGACACGTGTaGATACAAAGCGGCCCTCACGCGTTGATGGCGGCCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: AVQRGDLDMGAHGHV*IQSGPHALMAASSL
Trigger: CAAGCTGCTGGCCGCCATCAACGCGTGAGGGCCGCTTTGTATGCACACGTGTCCATGTGCACCCATGTCCAAGTCACCTCTCTGCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000600408.1
ENST00000601549.2
CDS GCA 90 bp CCGGTGTTTCAGCCGCACCTGGCGGAACCTGGACAGGCATGGACATaGACACACACAGCCGTGCAGAGAGGTGACTTGGACATGGGTGCA +
Preference number: 5 (lower is better)
Translates to: PVFQPHLAEPGQAWT*THTAVQRGDLDMGA
Trigger: TGCACCCATGTCCAAGTCACCTCTCTGCACGGCTGTGTGTGTGCATGTCCATGCCTGTCCAGGTTCCGCCAGGTGCGGCTGAAACACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR CAA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGATGGTGTCCTCTTTGTaGTCCCACCAGGGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGMVSSL*SHQGAP
Trigger: TGGCGCCCCCTGGTGGGACAACAAAGAGGACACCAT...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGGCAGCCACTGTGGCTaGCAGGTCGTCAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: VRSGRDDVHHLSTGESSLGSHCG*QVVSLL
Trigger: GAGCAGGCTGACGACCTGCAAGCCACAGTGGCTGCC...CAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp TTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGCAGCCACTGTGGCTaGCAGGTCGTCAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LFRAGSGVAETMSTTSVLGSHCG*QVVSLL
Trigger: GAGCAGGCTGACGACCTGCAAGCCACAGTGGCTGCC...CAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACAGGCAGACGATCTaGCCCCACATGGTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: HLRCFVQGWVRSGRDDVHHRQTI*PHMVPG
Trigger: GCCGGGCACCATGTGGGGCAAGATCGTCTGCCTGTG...GTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGACCTGGCGGAACGCGTaGATGGCGGCCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: VRSGRDDVHHLSTGESSLTWRNA*MAASSL
Trigger: CAAGCTGCTGGCCGCCATCAACGCGTTCCGCCAGGT...CAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGACCTGGCGGAACGCGTaGATGGCGGCCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PLVLALEVLCSGLGQEWQTWRNA*MAASSL
Trigger: CAAGCTGCTGGCCGCCATCAACGCGTTCCGCCAGGT...CTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACACCTGGCGGAACGCGTaGATGGCGGCCAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HLRCFVQGWVRSGRDDVHTWRNA*MAASSL
Trigger: CAAGCTGCTGGCCGCCATCAACGCGTTCCGCCAGGT...GTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp ACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGGGGTGGCGGAAGCGGACTaGATTGAGAGCGCCGATGCT +
Preference number: 5 (lower is better)
Translates to: TEASQNPGSGPLVPSFPGVAEAD*IESADA
Trigger: AGCATCGGCGCTCTCAATCAAGTCCGCTTCCGCCAC...CCCTGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS CCA 90 bp ATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTaGCGGAACCTGGACAGGCATGGACATGCACACACACAGCCGTGC +
Preference number: 5 (lower is better)
Translates to: MEFTCSRSFRCFSRT*RNLDRHGHAHTQPC
Trigger: GCACGGCTGTGTGTGTGCATGTCCATGCCTGTCCAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR CAA 90 bp AGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCCACCATGGAGTTCACTaGTTCCCGGAGCTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: SQGPLWSLHLRCFVQGWVHHGVH*FPELPV
Trigger: CACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTG...GACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CACCTCCAGCCCCGCCCCAGCCTCATACCCAGTTCTTCAGCTCGGCCAGCGGTAAGGATCATGTGCATCTaGGAGATGTCCACCATGGAG +
Preference number: 5 (lower is better)
Translates to: HLQPRPSLIPSSSARPAVRIMCI*EMSTME
Trigger: CTCCATGGTGGACATCTCCAAGATGCACATGATCCT...TACCGCTGGCCGAGCTGAAGAACTGGGTATGAGGCTGGGGCGGGGCTGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTCGTGGGTCCAGCTACTaGGACTGCTGGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: GWVRSGRDDVHHLSTGESRGSSY*DCWLGS
Trigger: AGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCACG...ACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS GCA 90 bp ACCTGGCGGAACCTGGACAGGCATGGACATGCACACACACAGCCGTaGAGAGAGGTGACTTGGACATGGGTGCACATGGACACGTGTGCA +
Preference number: 5 (lower is better)
Translates to: TWRNLDRHGHAHTQP*REVTWTWVHMDTCA
Trigger: TGCACACGTGTCCATGTGCACCCATGTCCAAGTCACCTCTCTGCACGGCTGTGTGTGTGCATGTCCATGCCTGTCCAGGTTCCGCCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR CAA 90 bp GCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAAAGCCAGGGCCCCCTTaGGTCCTTGCACTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: AGSGVAETMSTTSVLGKVKPGPP*VLALEV
Trigger: CACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTT...TACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp TGCCTCCAGTCGCCTGCACTTGTAACTGAGAGCTGGAGGTCGTCCATAGCAGCAATGGTGTCCTCTTTGTaGTCCCACCAGGGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: CLQSPALVTESWRSSIAAMVSSL*SHQGAP
Trigger: TGGCGCCCCCTGGTGGGACAACAAAGAGGACACCAT...TGCTGCTATGGACGACCTCCAGCTCTCAGTTACAAGTGCAGGCGACTGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGATGGTGTCCTCTTTGTaGTCCCACCAGGGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: PLVLALEVLCSGLGQEWQMVSSL*SHQGAP
Trigger: TGGCGCCCCCTGGTGGGACAACAAAGAGGACACCAT...CTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGATGGTGTCCTCTTTGTaGTCCCACCAGGGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: VRSGRDDVHHLSTGESSLMVSSL*SHQGAP
Trigger: TGGCGCCCCCTGGTGGGACAACAAAGAGGACACCAT...CAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCCACCATGGAGTTCACTaGTTCCCGGAGCTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: PLWSLHLRCFVQGWVRSGHHGVH*FPELPV
Trigger: CACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTG...GCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp ATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGGGTCCACGTGGGTCCAGCTACTaGGACTGCTGGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: MSTTSVLGKVAWFLLVGPRGSSY*DCWLGS
Trigger: AGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCACG...TGGACCCACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGCGTGGGTCCAGCTACTaGGACTGCTGGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: VRSGRDDVHHLSTGESSLRGSSY*DCWLGS
Trigger: AGAACCCAGCCAGCAGTCCAAGTAGCTGGACCCACG...CAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp AGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTCAGTCCCGCAGCCCGTaGTCGGTCATGAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: RDDVHHLSTGESSLVPPRQSRSP*SVMNSW
Trigger: CCAGCTGTTCATGACCGACAACGGGCTGCGGGACTG...ACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACGTGGCGGAAGCGGACTaGATTGAGAGCGCCGATGCT +
Preference number: 5 (lower is better)
Translates to: HLRCFVQGWVRSGRDDVHVAEAD*IESADA
Trigger: AGCATCGGCGCTCTCAATCAAGTCCGCTTCCGCCAC...GTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGCTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: VQGWVRSGRDDVHHLSTGLWSLH*RCFVQG
Trigger: GCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAG...CCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGCTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GLGQEWQRRCPPPQYWGKLWSLH*RCFVQG
Trigger: GCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAG...CTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CCCCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAAAATGGTGTCCTCTTaGTTGTCCCACCAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: PLWSLHLRCFVQGWVRSGKMVSS*LSHQGA
Trigger: CGCCCCCTGGTGGGACAACAAAGAGGACACCATTTT...GCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp AAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTGTGCAGAGAGGTGACTaGGACATGGGTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: KPTHSKPGPPLVLALEVLVQRGD*DMGAHG
Trigger: TCCATGTGCACCCATGTCCAAGTCACCTCTCTGCAC...AAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS TCA 90 bp ACATGGTGCCCGGCACCACGTCACCATAGCCGATGGTCAGGAATGTaGTGGGGATCAGCCAAAGTGTGTCTGAAAGGTGCCCAGTGGCAT +
Preference number: 5 (lower is better)
Translates to: TWCPAPRHHSRWSGM*WGSAKVCLKGAQWH
Trigger: ATGCCACTGGGCACCTTTCAGACACACTTTGGCTGATCCCCATCACATTCCTGACCATCGGCTATGGTGACGTGGTGCCGGGCACCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000601549.2
ENST00000615047.4
ENST00000648053.1
ENST00000648319.1
CDS GCA 90 bp ATGGTCAGGAATGTGATGGGGATCAGCCAAAGTGTGTCTGAAAGGTaGCCAGTGGCATTAACAGCCTGCCTCTCGGCCACGGACAGCACC +
Preference number: 5 (lower is better)
Translates to: MVRNVMGISQSVSER*PVALTACLSATDST
Trigger: GGTGCTGTCCGTGGCCGAGAGGCAGGCTGTTAATGCCACTGGGCACCTTTCAGACACACTTTGGCTGATCCCCATCACATTCCTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000601549.2
ENST00000615047.4
ENST00000648319.1
CDS CCA 90 bp GCTTCCGGTGTTTCAGCCGCACCTGGCGGAACCTGTGGGAAGAAGTaGGGAGTCAGTTTTACAAGCCTGGTCCCTGAATGTAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: ASGVSAAPGGTCGKK*GVSFTSLVPECSCS
Trigger: GCTACAGCTACATTCAGGGACCAGGCTTGTAAAACTGACTCCCCACTTCTTCCCACAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597184.5
ENST00000601549.2
CDS-3UTR CAA 90 bp TTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGAAAATGGTGTCCTCTTaGTTGTCCCACCAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: LFRAGSGVAETMSTTSVLKMVSS*LSHQGA
Trigger: CGCCCCCTGGTGGGACAACAAAGAGGACACCATTTT...CAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTGAAAATGGTGTCCTCTTaGTTGTCCCACCAGGGGGCG +
Preference number: 5 (lower is better)
Translates to: ETMSTTSVLGKVAWFLLVKMVSS*LSHQGA
Trigger: CGCCCCCTGGTGGGACAACAAAGAGGACACCATTTT...CACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GGGCTGGGTCAGGAGTGGCAGAGACGATGTCCACCACCTCAGTACTGGGGAAAGAGGATCATGTGCATCTaGGAGATGTCCACCATGGAG +
Preference number: 5 (lower is better)
Translates to: GLGQEWQRRCPPPQYWGKRIMCI*EMSTME
Trigger: CTCCATGGTGGACATCTCCAAGATGCACATGATCCT...CTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCTGCCACTCCTGACCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp TGCACACACACAGCCGTGCAGAGAGGTGACTTGGACATGGGTGCACATGGACACGTGCAGAGAGGTGACTaGGACATGGGTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: CTHTAVQRGDLDMGAHGHVQRGD*DMGAHG
Trigger: TCCATGTGCACCCATGTCCAAGTCACCTCTCTGCAC...GTGTCCATGTGCACCCATGTCCAAGTCACCTCTCTGCACGGCTGTGTGTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600408.1
CDS TCA 90 bp ACACATAGAGTCATGCACGGTCAGATCCAGGTGAGACCTGGATGTTaGGTGAGACCACACCTGGGTGTCCTGACCTGGACAGGCATGGAC +
Preference number: 5 (lower is better)
Translates to: THRVMHGQIQVRPGC*VRPHLGVLTWTGMD
Trigger: GTCCATGCCTGTCCAGGTCAGGACACCCAGGTGTGGTCTCACTCAACATCCAGGTCTCACCTGGATCTGACCGTGCATGACTCTATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601549.2
CDS GCA 90 bp CCCAGTAGAAACCCAGGTACCCAGGTCCGCAGACACACCGAGATATaGGGAGACAAACCAGCACAGACACATAGAGTCATGCACGGTCAG +
Preference number: 5 (lower is better)
Translates to: PSRNPGTQVRRHTEI*GDKPAQTHRVMHGQ
Trigger: CTGACCGTGCATGACTCTATGTGTCTGTGCTGGTTTGTCTCCGCATATCTCGGTGTGTCTGCGGACCTGGGTACCTGGGTTTCTACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601549.2
CDS CCA 90 bp ATGGAGTTCACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTaGCGGAACCTGTGGGAAGAAGTGGGGAGTCAGTTTTACAAGCCT +
Preference number: 5 (lower is better)
Translates to: MEFTCSRSFRCFSRT*RNLWEEVGSQFYKP
Trigger: AGGCTTGTAAAACTGACTCCCCACTTCTTCCCACAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGTGAACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597184.5
ENST00000601549.2
CDS-3UTR CAA 90 bp CCTTTGGTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGCTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: PLVLALEVLCSGLGQEWQLWSLH*RCFVQG
Trigger: GCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAG...CTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp TGTTCCCACCTGGGGCCTCAGGTGGGCCAAGGCCTACCCACTTTAGCCAGCGTCATAGTGAGAGTGTTTTaGATGAGGGTATGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: CSHLGPQVGQGLPTLASVIVRVF*MRVCRV
Trigger: CACTCTGCATACCCTCATCAAAAACACTCTCACTAT...GACGCTGGCTAAAGTGGGTAGGCCTTGGCCCACCTGAGGCCCCAGGTGGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GAGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGCACCATGGAGTTCACTaGTTCCCGGAGCTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: ESVFDEGMQSGGDHVPTWHHGVH*FPELPV
Trigger: CACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTG...CCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp AAGCCAACCCACTCCAAGCCAGGGCCCCCTTTGGTCCTTGCACTTGAGGTGCTTAGGATCATGTGCATCTaGGAGATGTCCACCATGGAG +
Preference number: 5 (lower is better)
Translates to: KPTHSKPGPPLVLALEVLRIMCI*EMSTME
Trigger: CTCCATGGTGGACATCTCCAAGATGCACATGATCCT...AAGCACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTTGGAGTGGGTTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp AGAGACGATGTCCACCACCTCAGTACTGGGGAAAGTAGCCTGGTTCCTCCTCGTCTTTGGTCCTTGCACTaGAGGTGCTTTGTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: RDDVHHLSTGESSLVPPRLWSLH*RCFVQG
Trigger: GCCCTGAACAAAGCACCTCAAGTGCAAGGACCAAAG...ACGAGGAGGAACCAGGCTACTTTCCCCAGTACTGAGGTGGTGGACATCGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CTGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGTCCAAGCCAGGGCCCCCTTaGGTCCTTGCACTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: LLRFCCRSYRIMCILEMSKPGPP*VLALEV
Trigger: CACCTCAAGTGCAAGGACCAAAGGGGGCCCTGGCTT...GGACATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599720.5
CDS-3UTR CAA 90 bp TCAGCTCGGCCAGCGGTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAATAGTGAGAGTGTTTTaGATGAGGGTATGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: SARPAVTEASQNPGSGPLIVRVF*MRVCRV
Trigger: CACTCTGCATACCCTCATCAAAAACACTCTCACTAT...TAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTACCGCTGGCCGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp TCAGGGCATCCAGCTTCCCCGCCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGACTCCTTCATCTCTTaGGTATACTGGATATCCATC +
Preference number: 5 (lower is better)
Translates to: SGHPASPPACQSVSPGPGDSFIS*VYWISI
Trigger: GATGGATATCCAGTATACCAAAGAGATGAAGGAGTC...ACCGGGCCCTGGAGAAACAGATTGACACGCTGGCGGGGAAGCTGGATGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CAA 90 bp GCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGTCCAAGGATCATGTGCATCTaGGAGATGTCCACCATGGAG +
Preference number: 5 (lower is better)
Translates to: ALEVLCSGLGQEWQRRCPRIMCI*EMSTME
Trigger: CTCCATGGTGGACATCTCCAAGATGCACATGATCCT...TGGACATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp CCAGCGTGTCAATCTGTTTCTCCAGGGCCCGGTGTGAGCTGCTCAGATTCTGCTAGGATCATGTGCATCTaGGAGATGTCCACCATGGAG +
Preference number: 5 (lower is better)
Translates to: PACQSVSPGPGVSCSDSARIMCI*EMSTME
Trigger: CTCCATGGTGGACATCTCCAAGATGCACATGATCCT...AGCAGAATCTGAGCAGCTCACACCGGGCCCTGGAGAAACAGATTGACACGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CAA 90 bp CTGGAAAAATGGTGTCCTCTTTGTTGTCCCACCAGGGGGCGCCACCTCCAGCCCATAGTGAGAGTGTTTTaGATGAGGGTATGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LEKWCPLCCPTRGRHLQPIVRVF*MRVCRV
Trigger: CACTCTGCATACCCTCATCAAAAACACTCTCACTAT...GGGCTGGAGGTGGCGCCCCCTGGTGGGACAACAAAGAGGACACCATTTTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GAGCTGCTCAGATTCTGCTGCAGGTCATACAGGATCATGTGCATCTTGGAGATGCACCATGGAGTTCACTaGTTCCCGGAGCTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: ELLRFCCRSYRIMCILEMHHGVH*FPELPV
Trigger: CACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTG...CATCTCCAAGATGCACATGATCCTGTATGACCTGCAGCAGAATCTGAGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000600408.1
CDS-3UTR CAA 90 bp GTCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGAATAGTGAGAGTGTTTTaGATGAGGGTATGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: VLALEVLCSGLGQEWQRRIVRVF*MRVCRV
Trigger: CACTCTGCATACCCTCATCAAAAACACTCTCACTAT...TCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598836.1
ENST00000600909.1
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GTAACTGAAGCCTCCCAGAATCCTGGATCCGGGCCCCTAGTACCCTCTTTCCCAGACTCCTTCATCTCTTaGGTATACTGGATATCCATC +
Preference number: 5 (lower is better)
Translates to: VTEASQNPGSGPLVPSFPDSFIS*VYWISI
Trigger: GATGGATATCCAGTATACCAAAGAGATGAAGGAGTC...TGGGAAAGAGGGTACTAGGGGCCCGGATCCAGGATTCTGGGAGGCTTCAGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp TCCTTGCACTTGAGGTGCTTTGTTCAGGGCTGGGTCAGGAGTGGCAGAGACGATGACTCCTTCATCTCTTaGGTATACTGGATATCCATC +
Preference number: 5 (lower is better)
Translates to: SLHLRCFVQGWVRSGRDDDSFIS*VYWISI
Trigger: GATGGATATCCAGTATACCAAAGAGATGAAGGAGTC...ATCGTCTCTGCCACTCCTGACCCAGCCCTGAACAAAGCACCTCAAGTGCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp TTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCCACCATGGAGTTCACTaGTTCCCGGAGCTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: FITKIRAEAGELHFFLPTHHGVH*FPELPV
Trigger: CACCGGAAGCTCCGGGAACAAGTGAACTCCATGGTG...GGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GAGAGTGTTTTTGATGAGGGTATGCAGAGTGGGGGTGACCATGTTCCCACCTGGGACTCCTTCATCTCTTaGGTATACTGGATATCCATC +
Preference number: 5 (lower is better)
Translates to: ESVFDEGMQSGGDHVPTWDSFIS*VYWISI
Trigger: GATGGATATCCAGTATACCAAAGAGATGAAGGAGTC...CCAGGTGGGAACATGGTCACCCCCACTCTGCATACCCTCATCAAAAACACTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615047.4
ENST00000648319.1
CDS-3UTR CAA 90 bp GAGCTGGAGGTCGTCCATAGCAGCATAGTGAGAGTGTTTTTGATGAGGGTATGCGAGACTCCTTCCTCTTaGGTATACTGGATATCCATC +
Preference number: 5 (lower is better)
Translates to: ELEVVHSSIVRVFLMRVCETPSS*VYWISI
Trigger: GATGGATATCCAGTATACCAAAGAGGAAGGAGTCTC...GCATACCCTCATCAAAAACACTCTCACTATGCTGCTATGGACGACCTCCAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS-3UTR CAA 90 bp TTTATTACAAAGATAAGAGCAGAGGCTGGTGAGTTACACTTCTTCCTCCCCACCGACACACGATGGGCTTaGTCACACACAATGGTCTGT +
Preference number: 5 (lower is better)
Translates to: FITKIRAEAGELHFFLPTDTRWA*SHTMVC
Trigger: ACAGACCATTGTGTGTGACAAAGCCCATCGTGTGTC...GGTGGGGAGGAAGAAGTGTAACTCACCAGCCTCTGCTCTTATCTTTGTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS GCA 72 bp CCACACACCACCAGCTCCAGCACGATCTGCGCCGCCTaGCGCCCGGTCAGCGCCACGCGCCAGTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: PHTTSSSTICAA*RPVSATRQSRS
Trigger: GCTGCGGGACTGGCGCGTGGCGCTGACCGGGCGGCAGGCGGCGCAGATCGTGCTGGAGCTGGTGGTGTGTGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599107.1
ENST00000648319.1
CDS GCA 72 bp GGGTGCAGCCCACACACCACCAGCTCCAGCACGATCTaGGCCGCCTGCCGCCCGGTCAGCGCCACGCGCCAG +
Preference number: 6 (lower is better)
Translates to: GCSPHTTSSSTI*AACRPVSATRQ
Trigger: CTGGCGCGTGGCGCTGACCGGGCGGCAGGCGGCGCAGATCGTGCTGGAGCTGGTGGTGTGTGGGCTGCACCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599107.1
ENST00000648319.1
CDS GCA 72 bp TCCTGCACGCACGGCGGGCCCCGCACGGGCGCCGGGTaGAGCCCACACACCACCAGCTCCAGCACGATCTGC +
Preference number: 6 (lower is better)
Translates to: SCTHGGPRTGAG*SPHTTSSSTIC
Trigger: GCAGATCGTGCTGGAGCTGGTGGTGTGTGGGCTGCACCCGGCGCCCGTGCGGGGCCCGCCGTGCGTGCAGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599107.1
ENST00000648319.1
CDS CCA 72 bp CGCAGCAGCATGGCCAGGGACAGCAGCGCTTCCCCTTaGCCCAGGAATCCCGGCCAGGGCTGCGGGGAGGTC +
Preference number: 6 (lower is better)
Translates to: RSSMARDSSASP*PRNPGQGCGEV
Trigger: GACCTCCCCGCAGCCCTGGCCGGGATTCCTGGGCCAAGGGGAAGCGCTGCTGTCCCTGGCCATGCTGCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599107.1
ENST00000601549.2
ENST00000648319.1
CDS CAA 72 bp ACGCAGCAGCATGGCCAGGGACAGCAGCGCTTCCCCTaGGCCCAGGAATCCCGGCCAGGGCTGCGGGGAGGT +
Preference number: 6 (lower is better)
Translates to: TQQHGQGQQRFP*AQESRPGLRGG
Trigger: ACCTCCCCGCAGCCCTGGCCGGGATTCCTGGGCCAAGGGGAAGCGCTGCTGTCCCTGGCCATGCTGCTGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599107.1
ENST00000601549.2
ENST00000648319.1
CDS TCA 72 bp ACAGCACCCAGGCGGTGGTCAGCCAGAGGCCAAGCGTaGGGCCGAGCAGCAGGCGGCCAGGGTGCGTGTTCA +
Preference number: 6 (lower is better)
Translates to: TAPRRWSARGQA*GRAAGGQGACS
Trigger: TGAACACGCACCCTGGCCGCCTGCTGCTCGGCCTCACGCTTGGCCTCTGGCTGACCACCGCCTGGGTGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000601549.2
ENST00000615047.4
ENST00000648319.1
CDS CCA 72 bp GTCCCCCACCTCGCAGCACGCACAGGGCAGCCACTGTaGCTTGCAGGTCGTCAGCCTGCTCTGCTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: VPHLAARTGQPL*LAGRQPALLAL
Trigger: CAGAGCCAGCAGAGCAGGCTGACGACCTGCAAGCCACAGTGGCTGCCCTGTGCGTGCTGCGAGGTGGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599720.5
ENST00000615047.4
CDS TCA 72 bp GCTTGGCCACGAACCAGTGGCGGAAGCGGACTTGATTaGGAGCGCCGATGCTGCGGTAGGAAGCGTTGCCTG +
Preference number: 6 (lower is better)
Translates to: AWPRTSGGSGLD*ERRCCGRKRCL
Trigger: CAGGCAACGCTTCCTACCGCAGCATCGGCGCTCTCAATCAAGTCCGCTTCCGCCACTGGTTCGTGGCCAAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS GCA 72 bp CAGCCGCACCTGGCGGAACCTGGACAGGCATGGACATaGACACACACAGCCGTGCAGAGAGGTGACTTGGAC +
Preference number: 6 (lower is better)
Translates to: QPHLAEPGQAWT*THTAVQRGDLD
Trigger: GTCCAAGTCACCTCTCTGCACGGCTGTGTGTGTGCATGTCCATGCCTGTCCAGGTTCCGCCAGGTGCGGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS GCA 72 bp GGCAGCCACTGTGGCTTGCAGGTCGTCAGCCTGCTCTaGTGGCTCTGGGACTTTTGCTCTGAGGCACAGCAG +
Preference number: 6 (lower is better)
Translates to: GSHCGLQVVSLL*WLWDFCSEAQQ
Trigger: CTGCTGTGCCTCAGAGCAAAAGTCCCAGAGCCAGCAGAGCAGGCTGACGACCTGCAAGCCACAGTGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS GCA 72 bp CACCATGAGTCCAATGCCAGTTCCTGCCAGCACCAGTaGCCAGCCGGCCAGAGACTTCTCCTGCTCCAGCAA +
Preference number: 6 (lower is better)
Translates to: HHESNASSCQHQ*PAGQRLLLLQQ
Trigger: TTGCTGGAGCAGGAGAAGTCTCTGGCCGGCTGGGCACTGGTGCTGGCAGGAACTGGCATTGGACTCATGGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599720.5
ENST00000615047.4
ENST00000648319.1
CDS CCA 72 bp AGCCACTGTGGCTTGCAGGTCGTCAGCCTGCTCTGCTaGCTCTGGGACTTTTGCTCTGAGGCACAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: SHCGLQVVSLLC*LWDFCSEAQQS
Trigger: GCTCTGCTGTGCCTCAGAGCAAAAGTCCCAGAGCCAGCAGAGCAGGCTGACGACCTGCAAGCCACAGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS CAA 90 bp CGTGTTCATGTAAAGCTTGGCCACGAACCAGTGGCGGAAGCGGACTaGATTGAGAGCGCCGATGCTGCGGTAGGAAGCGTTGCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: RVHVKLGHEPVAEAD*IESADAAVGSVACR
Trigger: GCGGCAGGCAACGCTTCCTACCGCAGCATCGGCGCTCTCAATCAAGTCCGCTTCCGCCACTGGTTCGTGGCCAAGCTTTACATGAACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS GCA 72 bp AGAGGTGACTTGGACATGGGTGCACATGGACACGTGTaGATACAAAGCGGCCCTCACGCGTTGATGGCGGCC +
Preference number: 6 (lower is better)
Translates to: RGDLDMGAHGHV*IQSGPHALMAA
Trigger: GGCCGCCATCAACGCGTGAGGGCCGCTTTGTATGCACACGTGTCCATGTGCACCCATGTCCAAGTCACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598836.1
ENST00000600408.1
ENST00000601549.2
CDS CCA 72 bp ACTTGTTCCCGGAGCTTCCGGTGTTTCAGCCGCACCTaGCGGAACCTGGACAGGCATGGACATGCACACACA +
Preference number: 6 (lower is better)
Translates to: TCSRSFRCFSRT*RNLDRHGHAHT
Trigger: TGTGTGTGCATGTCCATGCCTGTCCAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCGGGAACAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS CAA 90 bp CGTGTTCATGTAAAGCTTGGCCACGAACCAGTGGCGGAAGCGGACTaGATTGAGAGCGCCGATGCTGCGGTAGGAAGCGTTGAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: RVHVKLGHEPVAEAD*IESADAAVGSVEQD
Trigger: GTCCTGCTCAACGCTTCCTACCGCAGCATCGGCGCTCTCAATCAAGTCCGCTTCCGCCACTGGTTCGTGGCCAAGCTTTACATGAACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599107.1
ENST00000601549.2
ENST00000648319.1
CDS CAA 72 bp GTAAAGCTTGGCCACGAACCAGTGGCGGAAGCGGACTaGATTGAGAGCGCCGATGCTGCGGTAGGAAGCGTT +
Preference number: 6 (lower is better)
Translates to: VKLGHEPVAEAD*IESADAAVGSV
Trigger: AACGCTTCCTACCGCAGCATCGGCGCTCTCAATCAAGTCCGCTTCCGCCACTGGTTCGTGGCCAAGCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000599107.1
ENST00000601549.2
ENST00000615047.4
ENST00000648319.1
CDS TCA 72 bp CCGGCACCACGTCACCATAGCCGATGGTCAGGAATGTaGTGGGGATCAGCCAAAGTGTGTCTGAAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: PAPRHHSRWSGM*WGSAKVCLKGA
Trigger: GGCACCTTTCAGACACACTTTGGCTGATCCCCATCACATTCCTGACCATCGGCTATGGTGACGTGGTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000601549.2
ENST00000615047.4
ENST00000648053.1
ENST00000648319.1
CDS TCA 72 bp GTCATGCACGGTCAGATCCAGGTGAGACCTGGATGTTaGGTGAGACCACACCTGGGTGTCCTGACCTGGACA +
Preference number: 6 (lower is better)
Translates to: VMHGQIQVRPGC*VRPHLGVLTWT
Trigger: TGTCCAGGTCAGGACACCCAGGTGTGGTCTCACTCAACATCCAGGTCTCACCTGGATCTGACCGTGCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601549.2
CDS GCA 72 bp AACCTGGACAGGCATGGACATGCACACACACAGCCGTaGAGAGAGGTGACTTGGACATGGGTGCACATGGAC +
Preference number: 6 (lower is better)
Translates to: NLDRHGHAHTQP*REVTWTWVHMD
Trigger: GTCCATGTGCACCCATGTCCAAGTCACCTCTCTGCACGGCTGTGTGTGTGCATGTCCATGCCTGTCCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598836.1
CDS CCA 72 bp GTTTCAGCCGCACCTGGCGGAACCTGTGGGAAGAAGTaGGGAGTCAGTTTTACAAGCCTGGTCCCTGAATGT +
Preference number: 6 (lower is better)
Translates to: VSAAPGGTCGKK*GVSFTSLVPEC
Trigger: ACATTCAGGGACCAGGCTTGTAAAACTGACTCCCCACTTCTTCCCACAGGTTCCGCCAGGTGCGGCTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597184.5
ENST00000601549.2
CDS CCA 72 bp AAACAAAGAAACAAAGTTGTCGAAGAGCTGAAAGAGTaGGAGGGGATGCACCCTGCCTCCCCACGAGCCCCC +
Preference number: 6 (lower is better)
Translates to: KQRNKVVEELKE*EGMHPASPRAP
Trigger: GGGGGCTCGTGGGGAGGCAGGGTGCATCCCCTCCCACTCTTTCAGCTCTTCGACAACTTTGTTTCTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601549.2
CDS TCA 72 bp CCGTTGTCGGTCATGAACAGCTGGACCTCTTTGGCATaGAAGGCCACGATGAGGCAGAGGAGTAAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: PLSVMNSWTSLA*KATMRQRSKKV
Trigger: CACCTTCTTACTCCTCTGCCTCATCGTGGCCTTTCATGCCAAAGAGGTCCAGCTGTTCATGACCGACAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599107.1
ENST00000615047.4
ENST00000648319.1
CDS CCA 72 bp TCCCCTGCAAATCAGTCCCTCTTGATGTGTCGGTTCTaGAGAAGTCTCAAAACCATCATCTGGGCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: SPANQSLLMCRF*RSLKTIIWAQC
Trigger: GCACTGGGCCCAGATGATGGTTTTGAGACTTCTCCAGAACCGACACATCAAGAGGGACTGATTTGCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599107.1
CDS TCA 72 bp CGATGGGCTTTGTCACACACAATGGTCTGTACTTTGTaGCACACACCTCTACTCACCACACCCAGACACCGA +
Preference number: 6 (lower is better)
Translates to: RWALSHTMVCTL*HTPLLTTPRHR
Trigger: TCGGTGTCTGGGTGTGGTGAGTAGAGGTGTGTGTCACAAAGTACAGACCATTGTGTGTGACAAAGCCCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615047.4
CDS CCA 72 bp CACACACAGACACACGATGGGCTTTGTCACACACAATaGTCTGTACTTTGTGACACACACCTCTACTCACCA +
Preference number: 6 (lower is better)
Translates to: HTQTHDGLCHTQ*SVLCDTHLYSP
Trigger: TGGTGAGTAGAGGTGTGTGTCACAAAGTACAGACCATTGTGTGTGACAAAGCCCATCGTGTGTCTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615047.4