RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000143603

Ensembl transcript IDs: ENST00000271915.9, ENST00000358505.2, ENST00000361147.8, ENST00000515643.1, ENST00000618040.4

Found 1075 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCCCAGCTAGAGGAAGCTAGCAGAAAAGGCAGCCCGGCTCTTTaGTGGCTCTGGCTGTTCATGTCCTGCCGGCTCCTCCCATCACTC +
Preference number: 1 (lower is better)
Translates to: SSQLEEASRKGSPAL*WLWLFMSCRLLPSL
Trigger: GAGTGATGGGAGGAGCCGGCAGGACATGAACAGCCAGAGCCAGCAAAGAGCCGGGCTGCCTTTTCTGCTAGCTTCCTCTAGCTGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp TTGAGCGTGGATTTCTGTTCTCCACCAACTCTGCAGCAAGGGCCCTaGCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAG +
Preference number: 1 (lower is better)
Translates to: LSVDFCSPPTLQQGP*QRRRFLSSPLPAPK
Trigger: CTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGGTGGAGAACAGAAATCCACGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR GCA 90 bp ACAGGCAGGGCCCATGGAGCTGTGGAGAGTTCACTGGGACTCCTCTaGCTTCTAAGACACAGGTTCCCACCTGCTTCAGGGAGAGAGACT +
Preference number: 1 (lower is better)
Translates to: TGRAHGAVESSLGLL*LLRHRFPPASGRET
Trigger: AGTCTCTCTCCCTGAAGCAGGTGGGAACCTGTGTCTTAGAAGGCAGAGGAGTCCCAGTGAACTCTCCACAGCTCCATGGGCCCTGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp CCCCTGGCTGCCAAGCCTTCCTACTCACAATTCCACAAATGTGCCTaGAGCTGTGAGGACAGCTGGAGAGATCTGTTGTCTTTCTGGTCA +
Preference number: 1 (lower is better)
Translates to: PLAAKPSYSQFHKCA*SCEDSWRDLLSFWS
Trigger: TGACCAGAAAGACAACAGATCTCTCCAGCTGTCCTCACAGCTGCAGGCACATTTGTGGAATTGTGAGTAGGAAGGCTTGGCAGCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp AGGCCACTCTTCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTaGGGCACTTGGCCCTTTTGCACTACTAACATCTGGGGCTGGAAA +
Preference number: 1 (lower is better)
Translates to: RPLFITSPPSSEAHN*GTWPFCTTNIWGWK
Trigger: TTTCCAGCCCCAGATGTTAGTAGTGCAAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGAAGAGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp CACTGTATACAGGGCATGACCTCTCTGACTTGGCCCTGCCTATTATaGAAGTGTCACCATGGGGGCAGGGAGCTAGAGAGATTTAGTTGG +
Preference number: 1 (lower is better)
Translates to: HCIQGMTSLTWPCLL*KCHHGGRELERFSW
Trigger: CCAACTAAATCTCTCTAGCTCCCTGCCCCCATGGTGACACTTTCATAATAGGCAGGGCCAAGTCAGAGAGGTCATGCCCTGTATACAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp CCCACCTTCAAGGTCACACTTCCATATTTTGCACAGAGAAGAAAATaGAGTCTCCCATCCAGATCCTCAGACCCACACACCAGCCCACCA +
Preference number: 1 (lower is better)
Translates to: PTFKVTLPYFAQRRK*SLPSRSSDPHTSPP
Trigger: TGGTGGGCTGGTGTGTGGGTCTGAGGATCTGGATGGGAGACTGCATTTTCTTCTCTGTGCAAAATATGGAAGTGTGACCTTGAAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp AGTAAGGAACACAGTAACAACGCGAACAAAACCACACAGAGCATGTaGAGACCGGGCCCTTCTGATGCTGATGTGTGGAGAAAACTGGGC +
Preference number: 1 (lower is better)
Translates to: SKEHSNNANKTTQSM*RPGPSDADVWRKLG
Trigger: GCCCAGTTTTCTCCACACATCAGCATCAGAAGGGCCCGGTCTTCACATGCTCTGTGTGGTTTTGTTCGCGTTGTTACTGTGTTCCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp TGTGCTTTTCCTCCACCAGCTTGGTTGGTCACGATGTGTCTCTTTTaGTTGTTTCAACACATAGCCCAGGCCCAAGATTACAGCTTCCAG +
Preference number: 1 (lower is better)
Translates to: CAFPPPAWLVTMCLF*LFQHIAQAQDYSFQ
Trigger: CTGGAAGCTGTAATCTTGGGCCTGGGCTATGTGTTGAAACAAGCAAAAGAGACACATCGTGACCAACCAAGCTGGTGGAGGAAAAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp GCTTGGGAAGGGAAGAGACACATAGGCTCAGTTAATCTGCCCCGATaGAACCTGGTTTGCACCTGTACAATATTGCACCAAAGCAACAAC +
Preference number: 1 (lower is better)
Translates to: AWEGKRHIGSVNLPR*NLVCTCTILHQSNN
Trigger: GTTGTTGCTTTGGTGCAATATTGTACAGGTGCAAACCAGGTTGCATCGGGGCAGATTAACTGAGCCTATGTGTCTCTTCCCTTCCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp GAACCTTGCTCCCTCAAGGGTATTGCCAATTTAGAAAAGCACATCTaGACACTGGACTCTTGTTGGGCCTTGTGTAGTTTGGAAAGCCGA +
Preference number: 1 (lower is better)
Translates to: EPCSLKGIANLEKHI*TLDSCWALCSLESR
Trigger: TCGGCTTTCCAAACTACACAAGGCCCAACAAGAGTCCAGTGTGCAGATGTGCTTTTCTAAATTGGCAATACCCTTGAGGGAGCAAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp CCACTAGTCCACCTTCTGTGTGTGTTACCAAAAGGAAGCCATATTTaGAGCTGGTCTAAGCTCCAGCCCCTGCAATTTCATTTGCCTTTC +
Preference number: 1 (lower is better)
Translates to: PLVHLLCVLPKGSHI*SWSKLQPLQFHLPF
Trigger: GAAAGGCAAATGAAATTGCAGGGGCTGGAGCTTAGACCAGCTCCAAATATGGCTTCCTTTTGGTAACACACACAGAAGGTGGACTAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp TCCTACTCACAATTCCACAAATGTGCCTGCAGCTGTGAGGACAGCTaGAGAGATCTGTTGTCTTTCTGGTCACCTCTGACATTTTGCAGT +
Preference number: 1 (lower is better)
Translates to: SYSQFHKCACSCEDS*RDLLSFWSPLTFCS
Trigger: ACTGCAAAATGTCAGAGGTGACCAGAAAGACAACAGATCTCTCCAGCTGTCCTCACAGCTGCAGGCACATTTGTGGAATTGTGAGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp TTAGCTCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTaGTGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACC +
Preference number: 1 (lower is better)
Translates to: LARSLFFPFPGLNVS*WQSDQERVDLHLKT
Trigger: GGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR TCA 90 bp CAGGATTGGCACACTCAGATCAGCCCACCAGTGGTCTTCACTTTGTaGAATGGAACTAATGCCACAAGGAAACTGCATGGTTACTTCATC +
Preference number: 1 (lower is better)
Translates to: QDWHTQISPPVVFTL*NGTNATRKLHGYFI
Trigger: GATGAAGTAACCATGCAGTTTCCTTGTGGCATTAGTTCCATTTCACAAAGTGAAGACCACTGGTGGGCTGATCTGAGTGTGCCAATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp GTCCACCTTCTGTGTGTGTTACCAAAAGGAAGCCATATTTGGAGCTaGTCTAAGCTCCAGCCCCTGCAATTTCATTTGCCTTTCCTTAGT +
Preference number: 1 (lower is better)
Translates to: VHLLCVLPKGSHIWS*SKLQPLQFHLPFLS
Trigger: ACTAAGGAAAGGCAAATGAAATTGCAGGGGCTGGAGCTTAGACCAGCTCCAAATATGGCTTCCTTTTGGTAACACACACAGAAGGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp CTGGTTTGCACCTGTACAATATTGCACCAAAGCAACAACAGCAAGTaGGGGTCCCAGGTGAGAAGAGGCTCACTGATTCTAGAAAATCTT +
Preference number: 1 (lower is better)
Translates to: LVCTCTILHQSNNSK*GSQVRRGSLILENL
Trigger: AAGATTTTCTAGAATCAGTGAGCCTCTTCTCACCTGGGACCCTCACTTGCTGTTGTTGCTTTGGTGCAATATTGTACAGGTGCAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp AAGGCCAATTCTGATGAAGAAGGTTTGATGTGGGGCCTGAGATTCTaGATTTCTAACAAGCTTACAGATGATGCTAACGCTGCTGGTCTG +
Preference number: 1 (lower is better)
Translates to: KANSDEEGLMWGLRF*ISNKLTDDANAAGL
Trigger: CAGACCAGCAGCGTTAGCATCATCTGTAAGCTTGTTAGAAATGCAGAATCTCAGGCCCCACATCAAACCTTCTTCATCAGAATTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp CCTGGAGTTCAGATGGCTTTAGTGGAGCTCGGCCTAACATATAACTaGGGAGTAATACAGGCACTGAGAGAATTTAGCTCCATAACAAGA +
Preference number: 1 (lower is better)
Translates to: PGVQMALVELGLTYN*GVIQALREFSSITR
Trigger: TCTTGTTATGGAGCTAAATTCTCTCAGTGCCTGTATTACTCCTCAGTTATATGTTAGGCCGAGCTCCACTAAAGCCATCTGAACTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp TCTACAATTGTCTACCTTGTGCTGTCCTTAGAAGAACAGGCCCAGTaGTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCAGAAT +
Preference number: 1 (lower is better)
Translates to: STIVYLVLSLEEQAQ*YRIKISMPSHCLQN
Trigger: ATTCTGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCTTCTAAGGACAGCACAAGGTAGACAATTGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp ACCAATAGGTCAATTCATGCTACAAATGTCCATGTGTTTCTAGGATaGCAGTGGCTACTGCTACCAGAAATAACTCCAGTCACTCCCTTG +
Preference number: 1 (lower is better)
Translates to: TNRSIHATNVHVFLG*QWLLLPEITPVTPL
Trigger: CAAGGGAGTGACTGGAGTTATTTCTGGTAGCAGTAGCCACTGGCATCCTAGAAACACATGGACATTTGTAGCATGAATTGACCTATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp AGGTCAATTCATGCTACAAATGTCCATGTGTTTCTAGGATGCCAGTaGCTACTGCTACCAGAAATAACTCCAGTCACTCCCTTGACTAGT +
Preference number: 1 (lower is better)
Translates to: RSIHATNVHVFLGCQ*LLLPEITPVTPLTS
Trigger: ACTAGTCAAGGGAGTGACTGGAGTTATTTCTGGTAGCAGTAGCCACTGGCATCCTAGAAACACATGGACATTTGTAGCATGAATTGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp CTGGACACATGTGGTCAATACACATCCTGGATCTTACAAATCCAATaGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCACTC +
Preference number: 1 (lower is better)
Translates to: LDTCGQYTSWILQIQ*WPAVELKPVSFHSL
Trigger: GAGTGAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAGATCCAGGATGTGTATTGACCACATGTGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp ACAAGGTTCCCTAAGGGTTCCCTTCATTCTCACAATATTTCATTTTaGGATGACTTAAGGTCAGGTAGAAGGGACCACATAGGCCACTCT +
Preference number: 1 (lower is better)
Translates to: TRFPKGSLHSHNISF*DDLRSGRRDHIGHS
Trigger: AGAGTGGCCTATGTGGTCCCTTCTACCTGACCTTAAGTCATCTCAAAATGAAATATTGTGAGAATGAAGGGAACCCTTAGGGAACCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp TTCATCTGTTTACACATCTGCTTATATGTTCAGCTGAACTGTCACTaGAAACAGGAGCACCATTCTTGGGACATGAAACAAGGAGGAGGG +
Preference number: 1 (lower is better)
Translates to: FICLHICLYVQLNCH*KQEHHSWDMKQGGG
Trigger: CCCTCCTCCTTGTTTCATGTCCCAAGAATGGTGCTCCTGTTTTCAGTGACAGTTCAGCTGAACATATAAGCAGATGTGTAAACAGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp TGGTACTGTGATGGGAGCAACACCGTTTGTCCTGGGATGAAACATTaGTTCTTAATTTGGAGTGTACTGTTTGTTGAGTTGCACTCTGGA +
Preference number: 1 (lower is better)
Translates to: WYCDGSNTVCPGMKH*FLIWSVLFVELHSG
Trigger: TCCAGAGTGCAACTCAACAAACAGTACACTCCAAATTAAGAATCAATGTTTCATCCCAGGACAAACGGTGTTGCTCCCATCACAGTACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp TCACGTCTTTCCTTGCCCACCTTGGAGTGTTTCTTGTTGGTGCAATaGGTAAGAGAATTGGCTTTCAAGGAGATTAGCAATGTTTCTAGA +
Preference number: 1 (lower is better)
Translates to: SRLSLPTLECFLLVQ*VRELAFKEISNVSR
Trigger: TCTAGAAACATTGCTAATCTCCTTGAAAGCCAATTCTCTTACTCATTGCACCAACAAGAAACACTCCAAGGTGGGCAAGGAAAGACGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp AATGCCAACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTaGATATCCAGGACAAAGCAATGTGCATTATGTCTGAAGGGATCC +
Preference number: 1 (lower is better)
Translates to: NANNFGLASISNQAR*ISRTKQCALCLKGS
Trigger: GGATCCCTTCAGACATAATGCACATTGCTTTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGTTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp TCTGCAGATGCTGTTATTTTTAGAAGCCTGCTTATCCCTCCTGAATaGCAACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTG +
Preference number: 1 (lower is better)
Translates to: SADAVIFRSLLIPPE*QQFWLGIHFKSSKV
Trigger: CACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGTTGGCATTCAGGAGGGATAAGCAGGCTTCTAAAAATAACAGCATCTGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp ATCTTGCATGTCATTTGGTTGAAATTAAGACTAAATCTCTATATGTaGACACACCCACACTCACACCCACACGCACACATATCACAGGGT +
Preference number: 1 (lower is better)
Translates to: ILHVIWLKLRLNLYM*THPHSHPHAHISQG
Trigger: ACCCTGTGATATGTGTGCGTGTGGGTGTGAGTGTGGGTGTGTGCACATATAGAGATTTAGTCTTAATTTCAACCAAATGACATGCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp ACATACACCTGGTCATGTGGACCATCGAAACACAACTTGTTTGGATaGAAGAAGAAAACTCTGCAGATGCTGTTATTTTTAGAAGCCTGC +
Preference number: 1 (lower is better)
Translates to: TYTWSCGPSKHNLFG*KKKTLQMLLFLEAC
Trigger: GCAGGCTTCTAAAAATAACAGCATCTGCAGAGTTTTCTTCTTCCATCCAAACAAGTTGTGTTTCGATGGTCCACATGACCAGGTGTATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp AATTTCCCACAGGCAGAAACCAAAGACCTCAGAATGAGAAAGTCATaGTTTTCACGTCACAAATGTTACGTGTGGTCAGATTATGGAGCA +
Preference number: 1 (lower is better)
Translates to: NFPQAETKDLRMRKS*FSRHKCYVWSDYGA
Trigger: TGCTCCATAATCTGACCACACGTAACATTTGTGACGTGAAAACCATGACTTTCTCATTCTGAGGTCTTTGGTTTCTGCCTGTGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp ACACTTTTGGCCAGGAAGAGTGGCAGTGGAATCTTGCATGTCATTTaGTTGAAATTAAGACTAAATCTCTATATGTGCACACACCCACAC +
Preference number: 1 (lower is better)
Translates to: TLLARKSGSGILHVI*LKLRLNLYMCTHPH
Trigger: GTGTGGGTGTGTGCACATATAGAGATTTAGTCTTAATTTCAACCAAATGACATGCAAGATTCCACTGCCACTCTTCCTGGCCAAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp GTATCACAGTACATCCCTGACTTTACAGTACATGAAGCTTTAATATaGCTTAAGCAATGGCAGGGGTGGGGGTGGTTCTGTATTTCTAAT +
Preference number: 1 (lower is better)
Translates to: VSQYIPDFTVHEALI*LKQWQGWGWFCISN
Trigger: ATTAGAAATACAGAACCACCCCCACCCCTGCCATTGCTTAAGCCATATTAAAGCTTCATGTACTGTAAAGTCAGGGATGTACTGTGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp ACGTATCTGATGAAGGTGGATCAGTCCTGGTTGAGATTCAAAAACTaGGACAACATGACACAGCTAGAGAATGTTGTTTATTCCTTGTCC +
Preference number: 1 (lower is better)
Translates to: TYLMKVDQSWLRFKN*DNMTQLENVVYSLS
Trigger: GGACAAGGAATAAACAACATTCTCTAGCTGTGTCATGTTGTCTCAGTTTTTGAATCTCAACCAGGACTGATCCACCTTCATCAGATACGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp AGTGAGCCCCTAGTCTGGTGTAATTTACCAACTAATGCTATGTCCTaGAATTCCACTGAGATTAGTGGTCTTAAAGTATCACAGTACATC +
Preference number: 1 (lower is better)
Translates to: SEPLVWCNLPTNAMS*NSTEISGLKVSQYI
Trigger: GATGTACTGTGATACTTTAAGACCACTAATCTCAGTGGAATTTCAGGACATAGCATTAGTTGGTAAATTACACCAGACTAGGGGCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 90 bp CAGTGGTCTTCACTTTGTGAAATGGAACTAATGCCACAAGGAAACTaGATGGTTACTTCATCTGTTTACACATCTGCTTATATGTTCAGC +
Preference number: 1 (lower is better)
Translates to: QWSSLCEMELMPQGN*MVTSSVYTSAYMFS
Trigger: GCTGAACATATAAGCAGATGTGTAAACAGATGAAGTAACCATGCAGTTTCCTTGTGGCATTAGTTCCATTTCACAAAGTGAAGACCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp TACTCGTCTAACAGGAGTTTAACATTAATTTCTATTCATGCAGCCTaGCACAAGCTTTCTACTACCACAAGCAGACAGTTACTATTGCGA +
Preference number: 1 (lower is better)
Translates to: YSSNRSLTLISIHAA*HKLSTTTSRQLLLR
Trigger: TCGCAATAGTAACTGTCTGCTTGTGGTAGTAGAAAGCTTGTGCCAGGCTGCATGAATAGAAATTAATGTTAAACTCCTGTTAGACGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp TCTGCGCCGCTCATTACACTAAATCTTGATGTTTCTGAAGTCTCTTaGAGTTTGAGATGTATTGGAATAGTTTTTCGCACCAAGATTAAC +
Preference number: 1 (lower is better)
Translates to: SAPLITLNLDVSEVS*SLRCIGIVFRTKIN
Trigger: GTTAATCTTGGTGCGAAAAACTATTCCAATACATCTCAAACTCCAAGAGACTTCAGAAACATCAAGATTTAGTGTAATGAGCGGCGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp ACAATGAATAAATCACAGTCTGTGCACACTTTTGGCCAGGAAGAGTaGCAGTGGAATCTTGCATGTCATTTGGTTGAAATTAAGACTAAA +
Preference number: 1 (lower is better)
Translates to: TMNKSQSVHTFGQEE*QWNLACHLVEIKTK
Trigger: TTTAGTCTTAATTTCAACCAAATGACATGCAAGATTCCACTGCCACTCTTCCTGGCCAAAAGTGTGCACAGACTGTGATTTATTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 90 bp TTGTTCTTTTGGATTGTATTAAGCACTTCTAGAGACATGATGTCATaGAGTTACGTATTAGGAAGATGGCAAGAGCAGTTCATAGACACT +
Preference number: 1 (lower is better)
Translates to: LFFWIVLSTSRDMMS*SYVLGRWQEQFIDT
Trigger: AGTGTCTATGAACTGCTCTTGCCATCTTCCTAATACGTAACTTCATGACATCATGTCTCTAGAAGTGCTTAATACAATCCAAAAGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 90 bp TACAATGAACAGGTTAAAGCCATTAATTTAGAACATAACTGTTTCTaGGTACATATCGAGTTATGGCGCCAATATCAGAATTCACGTCTT +
Preference number: 1 (lower is better)
Translates to: YNEQVKAINLEHNCF*VHIELWRQYQNSRL
Trigger: AAGACGTGAATTCTGATATTGGCGCCATAACTCGATATGTACCCAGAAACAGTTATGTTCTAAATTAATGGCTTTAACCTGTTCATTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGTTCTCCACCAACTCTaGAGCAAGGGCCCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGVLHQL*SKGPAR
Trigger: TCTGGCAGGGCCCTTGCTGCAGAGTTGGTGGAGAAC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR GCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCTGCAGCAAGGGCCCTaGCAGAGGCGTCGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPLQQGP*QRRRFL
Trigger: CAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR TCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTGGTCTGAATGTTTCTTaGTGGCAAAGCGACCAGGAG +
Preference number: 2 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSGLNVS*WQSDQE
Trigger: CTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACC...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR TCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACAGGTCTGAATGTTTCTTaGTGGCAAAGCGACCAGGAG +
Preference number: 2 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTGLNVS*WQSDQE
Trigger: CTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACC...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR TCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTTTCCGTTCCCTGGTCTaGATGTTTCTTGATGGCAAA +
Preference number: 2 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAFRSLV*MFLDGK
Trigger: TTTGCCATCAAGAAACATTCAGACCAGGGAACGGAA...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR GCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCAGGAGAGAGTTGATTTaGATCTTAAGACCTATGGGT +
Preference number: 2 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGRRELI*ILRPMG
Trigger: ACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCT...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR TCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACATTCCGTTCCCTGGTCTaGATGTTTCTTGATGGCAAA +
Preference number: 2 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTFRSLV*MFLDGK
Trigger: TTTGCCATCAAGAAACATTCAGACCAGGGAACGGAA...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCACTCCTGACCTCAGGTaGTCCTCTCGCCTTGCCCAA +
Preference number: 2 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHITPDLR*SSRLAQ
Trigger: TTGGGCAAGGCGAGAGGATCACCTGAGGTCAGGAGT...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACTTGTTGTTCTACCACTaGCCCCTGCTGAGGTCGGTC +
Preference number: 2 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYLLFYH*PLLRSV
Trigger: GACCGACCTCAGCAGGGGCCAGTGGTAGAACAACAA...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACGGCACTTGGCCCTTTTaGACTACTAACATCTGGGGC +
Preference number: 2 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYGTWPF*TTNIWG
Trigger: GCCCCAGATGTTAGTAGTGCAAAAGGGCCAAGTGCC...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGGAAAGGATACTGTCTaGGGCGTCATCAAGCCCACC +
Preference number: 2 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIGKDTV*GVIKPT
Trigger: GGTGGGCTTGATGACGCCCCAGACAGTATCCTTTCC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACGAGTGTACTGTTTGTTaGGTTGCACTCTGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYECTVC*VALWRR
Trigger: CCTCCTCCAGAGTGCAACTCAACAAACAGTACACTC...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAACTGCAGCAAGGGCCCTaGCAGAGGCGTCGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQLQQGP*QRRRFL
Trigger: CAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAG...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGGGGGTGCCTATTGTATaGAGGGTAAGGTGTCAAGTC +
Preference number: 2 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEGVPIV*RVRCQV
Trigger: GACTTGACACCTTACCCTGCATACAATAGGCACCCC...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACAAGCAATGGCAGGGGTaGGGGTGGTTCTGTATTTCT +
Preference number: 2 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYKQWQG*GWFCIS
Trigger: AGAAATACAGAACCACCCCCACCCCTGCCATTGCTT...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGCTCAGAAACAGTCATTaGGAGAGCAGGCTGACAGTG +
Preference number: 2 (lower is better)
Translates to: KADSYRQLYNCRQAGPMELRNSH*ESRLTV
Trigger: CACTGTCAGCCTGCTCTCCCAATGACTGTTTCTGAG...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTCAGTTGTGGTACTGTaGTGGGAGCAACACCGTTTG +
Preference number: 2 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHISVVVL*WEQHRL
Trigger: CAAACGGTGTTGCTCCCATCACAGTACCACAACTGA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGGGAGTTCTTACTGGTaGGATGCTGAGTTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIGSSYW*DAEFLK
Trigger: CTTGAGGAACTCAGCATCTCACCAGTAAGAACTCCC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGGAGAGAGTTGATTTaGATCTTAAGACCTATGGGT +
Preference number: 2 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQRRELI*ILRPMG
Trigger: ACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCT...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCAGCGGACCCCTCTTCTaGACTGGCTTCGCTGTTGGC +
Preference number: 2 (lower is better)
Translates to: LTNPMVASSRTEACKFSFSGPLF*TGFAVG
Trigger: GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCT...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGACTCTTGTTGTTCTCGTaGCCAGTGCAGAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGLLLFS*PVQNGE
Trigger: CTCTCCATTCTGCACTGGCCACGAGAACAACAAGAG...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp CCCTTAGGAGCTGGGCTCCATGTCCTTGATAAACATGTGGGAACCTaGCTCCCTCAAGGGTATTGCCAATTTAGAAAAGCACATCTGCAC +
Preference number: 2 (lower is better)
Translates to: PLGAGLHVLDKHVGT*LPQGYCQFRKAHLH
Trigger: GTGCAGATGTGCTTTTCTAAATTGGCAATACCCTTGAGGGAGCAAGGTTCCCACATGTTTATCAAGGACATGGAGCCCAGCTCCTAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp CTGGCGACTCTTCCTGGAGCTCTAGGGACTTCTAACCAGAGCAAGTaGGTTCATTACAAGCTGTCACACCACAGAAAGAGAAGACCTTTG +
Preference number: 2 (lower is better)
Translates to: LATLPGALGTSNQSK*VHYKLSHHRKRRPL
Trigger: CAAAGGTCTTCTCTTTCTGTGGTGTGACAGCTTGTAATGAACCAACTTGCTCTGGTTAGAAGTCCCTAGAGCTCCAGGAAGAGTCGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAGGGCTGGAAACCTGTTaGTGGATAAATACAGCTCAG +
Preference number: 2 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGGLETC*WINTAQ
Trigger: CTGAGCTGTATTTATCCAGCAACAGGTTTCCAGCCC...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGACATGTGTTTCTAGGATaGCAGTGGCTACTGCTACCA +
Preference number: 2 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGHVFLG*QWLLLP
Trigger: TGGTAGCAGTAGCCACTGGCATCCTAGAAACACATG...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCAGAGATTAGATTTCTaGTTTCAAGGCATGTCGGAC +
Preference number: 2 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPQRLDF*FQGMSD
Trigger: GTCCGACATGCCTTGAAACCAGAAATCTAATCTCTG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR CCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAAGTGAAGCTGGACGTTaGCTGCTTCGATCTGATTCA +
Preference number: 2 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGSEAGR*LLRSDS
Trigger: TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGCCGGTTTCACGTACATaGAGAAACTCAGAATGCCTA +
Preference number: 2 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEPVSRT*RNSECL
Trigger: TAGGCATTCTGAGTTTCTCCATGTACGTGAAACCGG...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp TTGTGCTTTTCCTCCACCAGCTTGGTTGGTCACGATGTGTCTCTTTaGCTTGTTTCAACACATAGCCCAGGCCCAAGATTACAGCTTCCA +
Preference number: 2 (lower is better)
Translates to: LCFSSTSLVGHDVSL*LVSTHSPGPRLQLP
Trigger: TGGAAGCTGTAATCTTGGGCCTGGGCTATGTGTTGAAACAAGCAAAAGAGACACATCGTGACCAACCAAGCTGGTGGAGGAAAAGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp TTCCACAAATGTGCCTGCAGCTGTGAGGACAGCTGGAGAGATCTGTaGTCTTTCTGGTCACCTCTGACATTTTGCAGTGTCTCTTCTGAT +
Preference number: 2 (lower is better)
Translates to: FHKCACSCEDSWRDL*SFWSPLTFCSVSSD
Trigger: ATCAGAAGAGACACTGCAAAATGTCAGAGGTGACCAGAAAGACAACAGATCTCTCCAGCTGTCCTCACAGCTGCAGGCACATTTGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp GAAGGCCATAGACTAAGCCCACCTTCAAGGTCACACTTCCATATTTaGCACAGAGAAGAAAATGCAGTCTCCCATCCAGATCCTCAGACC +
Preference number: 2 (lower is better)
Translates to: EGHRLSPPSRSHFHI*HREENAVSHPDPQT
Trigger: GGTCTGAGGATCTGGATGGGAGACTGCATTTTCTTCTCTGTGCAAAATATGGAAGTGTGACCTTGAAGGTGGGCTTAGTCTATGGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAGTAGGAACAGGCTACTaGCAAATCCATGTCCACTTA +
Preference number: 2 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGVGTGY*QIHVHL
Trigger: TAAGTGGACATGGATTTGTCAGTAGCCTGTTCCTAC...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGCTACTGGTAGTGCAATaGCTTCACAGTATCTCAGTT +
Preference number: 2 (lower is better)
Translates to: KADSYRQLYNCRQAGPMELLVVQ*LHSISV
Trigger: AACTGAGATACTGTGAAGTCATTGCACTACCAGTAG...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATGCACTACTAACATCTaGGGCTGGAAACCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSCTTNI*GWKPVA
Trigger: AGCAACAGGTTTCCAGCCCCAGATGTTAGTAGTGCA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACCTGAAAAAGTGGCCTTaGCTCTACAATTGTCTACCT +
Preference number: 2 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYLKKWP*LYNCLP
Trigger: AGGTAGACAATTGTAGAGCCAAGGCCACTTTTTCAG...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGCTGAAAAAGTGGCCTTaGCTCTACAATTGTCTACCT +
Preference number: 2 (lower is better)
Translates to: KADSYRQLYNCRQAGPMELKKWP*LYNCLP
Trigger: AGGTAGACAATTGTAGAGCCAAGGCCACTTTTTCAG...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAAGATCAGCCCACCAGTaGTCTTCACTTTGTGAAATG +
Preference number: 2 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGRSAHQ*SSLCEM
Trigger: CATTTCACAAAGTGAAGACCACTGGTGGGCTGATCT...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp GGATGCCAGTGGCTACTGCTACCAGAAATAACTCCAGTCACTCCCTaGACTAGTGTTGCTAGTTTGGTCTTTAGGGTTTACCTAAGTGAG +
Preference number: 2 (lower is better)
Translates to: GCQWLLLPEITPVTP*TSVASLVFRVYLSE
Trigger: CTCACTTAGGTAAACCCTAAAGACCAAACTAGCAACACTAGTCAAGGGAGTGACTGGAGTTATTTCTGGTAGCAGTAGCCACTGGCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGGAAGAAAACTTGGGTaGGCTACACCCAGAATAATT +
Preference number: 2 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIGRKLG*ATPRII
Trigger: AATTATTCTGGGTGTAGCTCACCCAAGTTTTCTTCC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATCCATGCCAAGCCACTaGCTTCAGAATGGTGATGAT +
Preference number: 2 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSSMPSH*LQNGDD
Trigger: ATCATCACCATTCTGAAGGCAGTGGCTTGGCATGGA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAGCAGACAGTTACTATTaGGATCCCTGTAAACTCCTT +
Preference number: 2 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGADSYY*DPCKLL
Trigger: AAGGAGTTTACAGGGATCGCAATAGTAACTGTCTGC...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTATCAATATTTCTGGTaGATACAGGTCACCTGGGGA +
Preference number: 2 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIYQYFW*IQVTWG
Trigger: TCCCCAGGTGACCTGTATGCACCAGAAATATTGATA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAACTCCAGTTCACGTTTaGGTGTTTCCAGTAATGGCG +
Preference number: 2 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSTPVHV*VFPVMA
Trigger: CGCCATTACTGGAAACACCCAAACGTGAACTGGAGT...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGCTTATCAATATTTCTaGTGCATACAGGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIAYQYF*CIQVTW
Trigger: CCAGGTGACCTGTATGCACCAGAAATATTGATAAGC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGAGTGTACTGTTTGTTaGGTTGCACTCTGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFECTVC*VALWRR
Trigger: CCTCCTCCAGAGTGCAACTCAACAAACAGTACACTC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGGGCACTTGGCCCTTTTaGACTACTAACATCTGGGGC +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVGTWPF*TTNIWG
Trigger: GCCCCAGATGTTAGTAGTGCAAAAGGGCCAAGTGCC...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATACTGTTTGTTGAGTTaGACTCTGGAGGAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSYCLLS*TLEEEE
Trigger: TTCCTCCTCCTCCAGAGTGCAACTCAACAAACAGTA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTAGCACATCTGCACACTaGACTCTTGTTGGGCCTTGT +
Preference number: 2 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFSTSAH*TLVGPC
Trigger: ACAAGGCCCAACAAGAGTCCAGTGTGCAGATGTGCT...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp TCACAGGGTTATAGCAGAATGAAAACGGTGGGTAGGAATCACCAGTaGAAGGCTGTAGGTTTAAATGATCAGGATTGGCACACTCAGATC +
Preference number: 2 (lower is better)
Translates to: SQGYSRMKTVGRNHQ*KAVGLNDQDWHTQI
Trigger: GATCTGAGTGTGCCAATCCTGATCATTTAAACCTACAGCCTTCAACTGGTGATTCCTACCCACCGTTTTCATTCTGCTATAACCCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGTGGTCTTCACTTTGTaGAATGGAACTAATGCCACA +
Preference number: 2 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSVVFTL*NGTNAT
Trigger: TGTGGCATTAGTTCCATTTCACAAAGTGAAGACCAC...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTTGAGATTCAAAAACTaGGACAACATGACACAGCTA +
Preference number: 2 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHILRFKN*DNMTQL
Trigger: TAGCTGTGTCATGTTGTCTCAGTTTTTGAATCTCAA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCATCTGTAAATCTATGTaGATTTTCAGGGCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIICKSM*IFRAWE
Trigger: TTCCCAAGCCCTGAAAATTCACATAGATTTACAGAT...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCACATGAAGCTTTAATATaGCTTAAGCAATGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSHEALI*LKQWQG
Trigger: CCCCTGCCATTGCTTAAGCCATATTAAAGCTTCATG...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGGGAGGAGGAAGGTTCTaGAACTACGTGCTAATCCCA +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVGGGRF*NYVLIP
Trigger: TGGGATTAGCACGTAGTTCCAGAACCTTCCTCCTCC...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGTTTCCTCCACCAGCTTaGTTGGTCACGATGTGTCTC +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVFPPPA*LVTMCL
Trigger: GAGACACATCGTGACCAACCAAGCTGGTGGAGGAAA...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGGCTAACTACCTGAACTaGAAGCACCCCATGTTCAGA +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVANYLN*KHPMFR
Trigger: TCTGAACATGGGGTGCTTTCAGTTCAGGTAGTTAGC...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACCTTGTCCTTCTTGAGTaGAGCTGGACGTTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDLVLLE*SWTLAA
Trigger: AGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAG...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCCCTGATAAAAACAAGTaGCCTGGAGTTCAGATGGCT +
Preference number: 2 (lower is better)
Translates to: LTNPMVASSRTEACKFSFPDKNK*PGVQMA
Trigger: AGCCATCTGAACTCCAGGGCACTTGTTTTTATCAGG...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCATTCACGTCTTTCCTTaGCCACCTTGGAGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: LTNPMVASSRTEACKFSFIHVFP*PPWSVS
Trigger: AGAAACACTCCAAGGTGGGCAAGGAAAGACGTGAAT...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp TTTTTAGAAGCCTGCTTATCCCTCCTGAATGCCAACAATTTTGGCTaGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAAAG +
Preference number: 2 (lower is better)
Translates to: FLEACLSLLNANNFG*ASISNQARCISRTK
Trigger: CTTTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGTTGGCATTCAGGAGGGATAAGCAGGCTTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp CACACTTTTGGCCAGGAAGAGTGGCAGTGGAATCTTGCATGTCATTaGGTTGAAATTAAGACTAAATCTCTATATGTGCACACACCCACA +
Preference number: 2 (lower is better)
Translates to: HTFGQEEWQWNLACH*VEIKTKSLYVHTPT
Trigger: TGTGGGTGTGTGCACATATAGAGATTTAGTCTTAATTTCAACCAAATGACATGCAAGATTCCACTGCCACTCTTCCTGGCCAAAAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp CACAGTCTGTGCACACTTTTGGCCAGGAAGAGTGGCAGTGGAATCTaGCATGTCATTTGGTTGAAATTAAGACTAAATCTCTATATGTGC +
Preference number: 2 (lower is better)
Translates to: HSLCTLLARKSGSGI*HVIWLKLRLNLYMC
Trigger: GCACATATAGAGATTTAGTCTTAATTTCAACCAAATGACATGCAAGATTCCACTGCCACTCTTCCTGGCCAAAAGTGTGCACAGACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp GACAACATGACACAGCTAGAGAATGTTGTTTATTCCTTGTCCTTCTaGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATA +
Preference number: 2 (lower is better)
Translates to: DNMTQLENVVYSLSF*SEAGRWLLRSDSDI
Trigger: TATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATAAACAACATTCTCTAGCTGTGTCATGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp TGTCTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTaGCTTAATTTTGCTATAAAGGACAATATCTCAACGGGAACCCTT +
Preference number: 2 (lower is better)
Translates to: CLSCSVEKEGCRFHE*LNFAIKDNISTGTL
Trigger: AAGGGTTCCCGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTCTCCAGTCACTCCCTTaGCTAGTGTTGCTAGTTTGG +
Preference number: 2 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFLQSLP*LVLLVW
Trigger: CCAAACTAGCAACACTAGTCAAGGGAGTGACTGGAG...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGAGGTACAAGAAGGCATaGCATGAGAATCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: GCRFHELLNFAIKDNISTRYKKA*HENPPA
Trigger: GGCAGGTGGATTCTCATGTCATGCCTTCTTGTACCT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATATCACCCAAGCTGGAGTaGAATGGCACGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYISPKLE*NGTILA
Trigger: AGCCAAGATCGTGCCATTGCACTCCAGCTTGGGTGA...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGAAGCTGGACGTTGGCTaGTTCGATCTGATTCAGATA +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVKLDVG*FDLIQI
Trigger: TATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTT...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGGACCCTTTTTCTGGGTaGCCGGCAATCACTAACAGT +
Preference number: 2 (lower is better)
Translates to: GCRFHELLNFAIKDNISTDPFSG*PAITNS
Trigger: ACTGTTAGTGATTGCCGGGCACCCAGAAAAAGGGTC...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTTTAGAAAAGCACATCTaGACACTGGACTCTTGTTGG +
Preference number: 2 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFLEKHI*TLDSCW
Trigger: CCAACAAGAGTCCAGTGTGCAGATGTGCTTTTCTAA...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAACCCCTCTTCTGGACTaGCTTCGCTGTTGGCTACTT +
Preference number: 2 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYITPLLD*LRCWLL
Trigger: AAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGGTGGCCAGTGCAGAATaGAGAGTCTGGGACCAAAAT +
Preference number: 2 (lower is better)
Translates to: GCRFHELLNFAIKDNISTVASAE*RVWDQN
Trigger: ATTTTGGTCCCAGACTCTCCATTCTGCACTGGCCAC...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAAGCACATCTGCACACTaGACTCTTGTTGGGCCTTGT +
Preference number: 2 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKSTSAH*TLVGPC
Trigger: ACAAGGCCCAACAAGAGTCCAGTGTGCAGATGTGCT...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCCTCCTCAGTTTTCTATaGCCCAATTTTCCCATTGGA +
Preference number: 2 (lower is better)
Translates to: LTNPMVASSRTEACKFSFLLSFL*PNFPIG
Trigger: TCCAATGGGAAAATTGGGCCATAGAAAACTGAGGAG...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTGATCCACATCTTCAGTaGAACTCAGAATGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFDPHLQ*NSECGQ
Trigger: CTGGCCACATTCTGAGTTTCACTGAAGATGTGGATC...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGCAGATTATGGAGCAATaGAAACATTTTTCTGCGCCG +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVQIMEQ*KHFSAP
Trigger: CGGCGCAGAAAAATGTTTTCATTGCTCCATAATCTG...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGAGTCACAGACCACAATaGATAAATCACAGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVSHRPQ*INHSLC
Trigger: GCACAGACTGTGATTTATTCATTGTGGTCTGTGACT...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACGGAGTGGGCAGATCTTaGTCAGTACAGTATTGGAGT +
Preference number: 2 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDGVGRS*SVQYWS
Trigger: ACTCCAATACTGTACTGATCAAGATCTGCCCACTCC...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGCAGGACAAAGCAATGTaGATTATGTCTGAAGGGATC +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVQDKAM*IMSEGI
Trigger: GATCCCTTCAGACATAATGCACATTGCTTTGTCCTG...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTGGGCTGGAAACCTGTTaGTGGATAAATACAGCTCAG +
Preference number: 2 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFGLETC*WINTAQ
Trigger: CTGAGCTGTATTTATCCAGCAACAGGTTTCCAGCCC...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTTCCATGCCAAGCCACTaGCTTCAGAATGGTGATGAT +
Preference number: 2 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFSMPSH*LQNGDD
Trigger: ATCATCACCATTCTGAAGGCAGTGGCTTGGCATGGA...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGCGGCATCTCTGGTATaGAAAACAACTAATGAAAGT +
Preference number: 2 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFAASLV*KTTNES
Trigger: ACTTTCATTAGTTGTTTTGCATACCAGAGATGCCGC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGGGTGCTTATATGAATTaGCCAAAGATGTGGATCCAG +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVGAYMN*PKMWIQ
Trigger: CTGGATCCACATCTTTGGCCAATTCATATAAGCACC...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGCTCCACCAGCTTGGTTaGTCACGATGTGTCTCTTTT +
Preference number: 2 (lower is better)
Translates to: GCRFHELLNFAIKDNISTLHQLG*SRCVSF
Trigger: AAAAGAGACACATCGTGACCAACCAAGCTGGTGGAG...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp CACTTACAGACATACACCTGGTCATGTGGACCATCGAAACACAACTaGTTTGGATGGAAGAAGAAAACTCTGCAGATGCTGTTATTTTTA +
Preference number: 2 (lower is better)
Translates to: HLQTYTWSCGPSKHN*FGWKKKTLQMLLFL
Trigger: TAAAAATAACAGCATCTGCAGAGTTTTCTTCTTCCATCCAAACAAGTTGTGTTTCGATGGTCCACATGACCAGGTGTATGTCTGTAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp GAAGATTTGACAATGGTTTTGTTCAGAGGGAACTCCAGTTCACGTTaGGGTGTTTCCAGTAATGGCGTAAGACAAAAAGATCACAGTTAT +
Preference number: 2 (lower is better)
Translates to: EDLTMVLFRGNSSSR*GVSSNGVRQKDHSY
Trigger: ATAACTGTGATCTTTTTGTCTTACGCCATTACTGGAAACACCCAAACGTGAACTGGAGTTCCCTCTGAACAAAACCATTGTCAAATCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAAGCTGTCTAAGGTACTaGAATCAAACCCTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKSCLRY*NQTLQS
Trigger: ACTCTGCAGGGTTTGATTTCAGTACCTTAGACAGCT...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGAATGCCAACAATTTTaGCTTGGCATCCATTTCAAA +
Preference number: 2 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFECQQF*LGIHFK
Trigger: TTTGAAATGGATGCCAAGCCAAAATTGTTGGCATTC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAGCACCAAGATTAACATaGCACAGTAGGAACAGGCTA +
Preference number: 2 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKAPRLT*HSRNRL
Trigger: TAGCCTGTTCCTACTGTGCCATGTTAATCTTGGTGC...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGTACATGCTCAGCGCTTaGAATTTACTTTTGCGTACA +
Preference number: 2 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVYMLSA*NLLLRT
Trigger: TGTACGCAAAAGTAAATTCCAAGCGCTGAGCATGTA...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACCCGGTTTCACGTACATaGAGAAACTCAGAATGCCTA +
Preference number: 2 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDPVSRT*RNSECL
Trigger: TAGGCATTCTGAGTTTCTCCATGTACGTGAAACCGG...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGAACATAACTGTTTCTaGGTACATATCGAGTTATGG +
Preference number: 2 (lower is better)
Translates to: LTNPMVASSRTEACKFSFEHNCF*VHIELW
Trigger: CCATAACTCGATATGTACCCAGAAACAGTTATGTTC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAACTGCAGGTTGGAGTTaGATTTTGTGCTTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYITAGWS*ILCFSS
Trigger: GGAGGAAAAGCACAAAATTCAACTCCAACCTGCAGT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATACGAGTATATCTGTTTTaGCAAGTTGTGGGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIRVYLF*QVVGSS
Trigger: AGAGCTGCCCACAACTTGCCAAAACAGATATACTCG...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAACATGAAGCTTTAATATaGCTTAAGCAATGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKHEALI*LKQWQG
Trigger: CCCCTGCCATTGCTTAAGCCATATTAAAGCTTCATG...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR TCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAGCTTATATGTTCAGCTaGACTGTCACTGAAAACAGG +
Preference number: 2 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIAYMFS*TVTENR
Trigger: CCTGTTTTCAGTGACAGTTCAGCTGAACATATAAGC...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGTCAAATCAAGCAAGGTaGATATCCAGGACAAAGCAA +
Preference number: 2 (lower is better)
Translates to: GCRFHELLNFAIKDNISTSNQAR*ISRTKQ
Trigger: TTGCTTTGTCCTGGATATGCACCTTGCTTGATTTGA...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGACGATGTGTCTCTTTTaGTTGTTTCAACACATAGCC +
Preference number: 2 (lower is better)
Translates to: GCRFHELLNFAIKDNISTTMCLF*LFQHIA
Trigger: GGCTATGTGTTGAAACAAGCAAAAGAGACACATCGT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACCACAACTTGTTTGGATaGAAGAAGAAAACTCTGCAG +
Preference number: 2 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDHNLFG*KKKTLQ
Trigger: CTGCAGAGTTTTCTTCTTCCATCCAAACAAGTTGTG...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGTACATGCTCAGCGCTTaGAATTTACTTTTGCGTACA +
Preference number: 2 (lower is better)
Translates to: GCRFHELLNFAIKDNISTYMLSA*NLLLRT
Trigger: TGTACGCAAAAGTAAATTCCAAGCGCTGAGCATGTA...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 90 bp GAATTTAGGGTAGAATTATTCCTCTACTCTTGGAATAATGTTCTTTaGTCTCTAATACCCAGGCCTTGGAGAATTAGAATATGGCAGTTC +
Preference number: 2 (lower is better)
Translates to: EFRVELFLYSWNNVL*SLIPRPWRIRIWQF
Trigger: GAACTGCCATATTCTAATTCTCCAAGGCCTGGGTATTAGAGACAAAAGAACATTATTCCAAGAGTAGAGGAATAATTCTACCCTAAATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATATTATTTTTAGAAGCCTaGTTATCCCTCCTGAATGCC +
Preference number: 2 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYILFLEA*LSLLNA
Trigger: GGCATTCAGGAGGGATAAGCAGGCTTCTAAAAATAA...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTCAAAGGAAAACTGGTTaGCTAGGTTTGAGACTTATA +
Preference number: 2 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFQRKTG*LGLRLI
Trigger: TATAAGTCTCAAACCTAGCCAACCAGTTTTCCTTTG...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAATGAAAACATTTTTCTaGGCCGCTCATTACACTAAA +
Preference number: 2 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKMKTFF*AAHYTK
Trigger: TTTAGTGTAATGAGCGGCGCAGAAAAATGTTTTCAT...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTATCTGTTTACACATCTaGTTATATGTTCAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFICLHI*LYVQLN
Trigger: GTTCAGCTGAACATATAAGCAGATGTGTAAACAGAT...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR GCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAATCTGTTTACACATCTaGTTATATGTTCAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKICLHI*LYVQLN
Trigger: GTTCAGCTGAACATATAAGCAGATGTGTAAACAGAT...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp GCTAGCAGAAAAGGCAGCCCGGCTCTTTGCTGGCTCTaGCTGTTCATGTCCTGCCGGCTCCTCCCATCACTC +
Preference number: 3 (lower is better)
Translates to: ASRKGSPALCWL*LFMSCRLLPSL
Trigger: GAGTGATGGGAGGAGCCGGCAGGACATGAACAGCCAGAGCCAGCAAAGAGCCGGGCTGCCTTTTCTGCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp CTAGAGGAAGCTAGCAGAAAAGGCAGCCCGGCTCTTTaGTGGCTCTGGCTGTTCATGTCCTGCCGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: LEEASRKGSPAL*WLWLFMSCRLL
Trigger: GAGGAGCCGGCAGGACATGAACAGCCAGAGCCAGCAAAGAGCCGGGCTGCCTTTTCTGCTAGCTTCCTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp GCCCATGGAGCTGTGGAGAGTTCACTGGGACTCCTCTaGCTTCTAAGACACAGGTTCCCACCTGCTTCAGGG +
Preference number: 3 (lower is better)
Translates to: AHGAVESSLGLL*LLRHRFPPASG
Trigger: CCCTGAAGCAGGTGGGAACCTGTGTCTTAGAAGGCAGAGGAGTCCCAGTGAACTCTCCACAGCTCCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCGCGACCAGGAGAGAGTaGATTTGCATCTTAAGACCT +
Preference number: 3 (lower is better)
Translates to: NSAARALPEASLPVISSSATRRE*ICILRP
Trigger: AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR CCA 72 bp TATTTTGGCGGCAGTAGAGAAGGAAAGGATACTGTCTaGGGCGTCATCAAGCCCACCGACTGCAAGGGGAGA +
Preference number: 3 (lower is better)
Translates to: YFGGSREGKDTV*GVIKPTDCKGR
Trigger: TCTCCCCTTGCAGTCGGTGGGCTTGATGACGCCCCAGACAGTATCCTTTCCTTCTCTACTGCCGCCAAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp TGCCCCGATGCAACCTGGTTTGCACCTGTACAATATTaGACCAAAGCAACAACAGCAAGTGAGGGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: CPDATWFAPVQY*TKATTASEGPR
Trigger: CCTGGGACCCTCACTTGCTGTTGTTGCTTTGGTGCAATATTGTACAGGTGCAAACCAGGTTGCATCGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCGCGACCAGGAGAGAGTaGATTTGCATCTTAAGACCT +
Preference number: 3 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPATRRE*ICILRP
Trigger: AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR GCA 72 bp GCCAAGCCTTCCTACTCACAATTCCACAAATGTGCCTaGAGCTGTGAGGACAGCTGGAGAGATCTGTTGTCT +
Preference number: 3 (lower is better)
Translates to: AKPSYSQFHKCA*SCEDSWRDLLS
Trigger: AGACAACAGATCTCTCCAGCTGTCCTCACAGCTGCAGGCACATTTGTGGAATTGTGAGTAGGAAGGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp TCTGCACACTGGACTCTTGTTGGGCCTTGTGTAGTTTaGAAAGCCGACCCCGGTTTCACGTACATGGAGAAA +
Preference number: 3 (lower is better)
Translates to: SAHWTLVGPCVV*KADPGFTYMEK
Trigger: TTTCTCCATGTACGTGAAACCGGGGTCGGCTTTCCAAACTACACAAGGCCCAACAAGAGTCCAGTGTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCAGGAGAGAGTTGATTaGCATCTTAAGACCTATGGG +
Preference number: 3 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPQERVD*HLKTYG
Trigger: CCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR CAA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGACTCCAGTCACTCCCTaGACTAGTGTTGCTAGTTTG +
Preference number: 3 (lower is better)
Translates to: KADSYRQLYNCRQAGPMETPVTP*TSVASL
Trigger: CAAACTAGCAACACTAGTCAAGGGAGTGACTGGAGT...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp CCTCCACCAGCTTGGTTGGTCACGATGTGTCTCTTTTaGTTGTTTCAACACATAGCCCAGGCCCAAGATTAC +
Preference number: 3 (lower is better)
Translates to: PPPAWLVTMCLF*LFQHIAQAQDY
Trigger: GTAATCTTGGGCCTGGGCTATGTGTTGAAACAAGCAAAAGAGACACATCGTGACCAACCAAGCTGGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp CAATTCCACAAATGTGCCTGCAGCTGTGAGGACAGCTaGAGAGATCTGTTGTCTTTCTGGTCACCTCTGACA +
Preference number: 3 (lower is better)
Translates to: QFHKCACSCEDS*RDLLSFWSPLT
Trigger: TGTCAGAGGTGACCAGAAAGACAACAGATCTCTCCAGCTGTCCTCACAGCTGCAGGCACATTTGTGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTGGTCTGAATGTTTCTaGATGGCAAAGCGACCAGGA +
Preference number: 3 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIWSECF*MAKRPG
Trigger: TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAACTCCAGTCACTCCCTaGACTAGTGTTGCTAGTTTG +
Preference number: 3 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGTPVTP*TSVASL
Trigger: CAAACTAGCAACACTAGTCAAGGGAGTGACTGGAGT...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTATTCCTTGTCCTTCTaGAGTGAAGCTGGACGTTGG +
Preference number: 3 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIYSLSF*SEAGRW
Trigger: CCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp GTCTACCTTGTGCTGTCCTTAGAAGAACAGGCCCAGTaGTACAGAATAAAAATCTCCATGCCAAGCCACTGC +
Preference number: 3 (lower is better)
Translates to: VYLVLSLEEQAQ*YRIKISMPSHC
Trigger: GCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCTTCTAAGGACAGCACAAGGTAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp GGGAAGAGACACATAGGCTCAGTTAATCTGCCCCGATaGAACCTGGTTTGCACCTGTACAATATTGCACCAA +
Preference number: 3 (lower is better)
Translates to: GKRHIGSVNLPR*NLVCTCTILHQ
Trigger: TTGGTGCAATATTGTACAGGTGCAAACCAGGTTGCATCGGGGCAGATTAACTGAGCCTATGTGTCTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp CACCAGTTGAAGGCTGTAGGTTTAAATGATCAGGATTaGCACACTCAGATCAGCCCACCAGTGGTCTTCACT +
Preference number: 3 (lower is better)
Translates to: HQLKAVGLNDQD*HTQISPPVVFT
Trigger: AGTGAAGACCACTGGTGGGCTGATCTGAGTGTGCCAATCCTGATCATTTAAACCTACAGCCTTCAACTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGCCTTGGCTCTACAATaGTCTACCTTGTGCTGTCCT +
Preference number: 3 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSALALQ*STLCCP
Trigger: AGGACAGCACAAGGTAGACAATTGTAGAGCCAAGGC...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGACTCATACAGGCAGTaGTATAACTGTAGACAGGCA +
Preference number: 3 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIDSYRQ*YNCRQA
Trigger: TGCCTGTCTACAGTTATACAACTGCCTGTATGAGTC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTTTCACTAAGGTGTTATaGGATTGCTCCTGTTTGTGC +
Preference number: 3 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFFTKVL*DCSCLC
Trigger: GCACAAACAGGAGCAATCCAATAACACCTTAGTGAA...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGGTAGGAATCACCAGTaGAAGGCTGTAGGTTTAAAT +
Preference number: 3 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIGRNHQ*KAVGLN
Trigger: ATTTAAACCTACAGCCTTCAACTGGTGATTCCTACC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCCCTGTCATTCTCTTGTaGTTCTCGTGGCCAGTGCAG +
Preference number: 3 (lower is better)
Translates to: LTNPMVASSRTEACKFSFPVILL*FSWPVQ
Trigger: CTGCACTGGCCACGAGAACAACAAGAGAATGACAGG...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTCTAACCAGAGCAAGTaGGTTCATTACAAGCTGTCA +
Preference number: 3 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHISNQSK*VHYKLS
Trigger: TGACAGCTTGTAATGAACCAACTTGCTCTGGTTAGA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 72 bp CACACTCAGATCAGCCCACCAGTGGTCTTCACTTTGTaGAATGGAACTAATGCCACAAGGAAACTGCATGGT +
Preference number: 3 (lower is better)
Translates to: HTQISPPVVFTL*NGTNATRKLHG
Trigger: ACCATGCAGTTTCCTTGTGGCATTAGTTCCATTTCACAAAGTGAAGACCACTGGTGGGCTGATCTGAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp CTGGGCTCCATGTCCTTGATAAACATGTGGGAACCTTaGTCCCTCAAGGGTATTGCCAATTTAGAAAAGCAC +
Preference number: 3 (lower is better)
Translates to: LGSMSLINMWEP*SLKGIANLEKH
Trigger: GTGCTTTTCTAAATTGGCAATACCCTTGAGGGAGCAAGGTTCCCACATGTTTATCAAGGACATGGAGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp ATAGGCTCAGTTAATCTGCCCCGATGCAACCTGGTTTaGACCTGTACAATATTGCACCAAAGCAACAACAGC +
Preference number: 3 (lower is better)
Translates to: IGSVNLPRCNLV*TCTILHQSNNS
Trigger: GCTGTTGTTGCTTTGGTGCAATATTGTACAGGTGCAAACCAGGTTGCATCGGGGCAGATTAACTGAGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp TTTCAACTTGGGGAAATTCATTTCCCATCCCCTGGCTaGCAAGCCTTCCTACTCACAATTCCACAAATGTGC +
Preference number: 3 (lower is better)
Translates to: FQLGEIHFPSPG*QAFLLTIPQMC
Trigger: GCACATTTGTGGAATTGTGAGTAGGAAGGCTTGGCAGCCAGGGGATGGGAAATGAATTTCCCCAAGTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp CATGCTACAAATGTCCATGTGTTTCTAGGATGCCAGTaGCTACTGCTACCAGAAATAACTCCAGTCACTCCC +
Preference number: 3 (lower is better)
Translates to: HATNVHVFLGCQ*LLLPEITPVTP
Trigger: GGGAGTGACTGGAGTTATTTCTGGTAGCAGTAGCCACTGGCATCCTAGAAACACATGGACATTTGTAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp CTGTGTGTGTTACCAAAAGGAAGCCATATTTGGAGCTaGTCTAAGCTCCAGCCCCTGCAATTTCATTTGCCT +
Preference number: 3 (lower is better)
Translates to: LCVLPKGSHIWS*SKLQPLQFHLP
Trigger: AGGCAAATGAAATTGCAGGGGCTGGAGCTTAGACCAGCTCCAAATATGGCTTCCTTTTGGTAACACACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp CACCTTCTGTGTGTGTTACCAAAAGGAAGCCATATTTaGAGCTGGTCTAAGCTCCAGCCCCTGCAATTTCAT +
Preference number: 3 (lower is better)
Translates to: HLLCVLPKGSHI*SWSKLQPLQFH
Trigger: ATGAAATTGCAGGGGCTGGAGCTTAGACCAGCTCCAAATATGGCTTCCTTTTGGTAACACACACAGAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATTGGTCTGAATGTTTCTaGATGGCAAAGCGACCAGGA +
Preference number: 3 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHWSECF*MAKRPG
Trigger: TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCA...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR CAA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGGGGCTGGAAACCTGTaGCTGGATAAATACAGCTCA +
Preference number: 3 (lower is better)
Translates to: LTNPMVASSRTEACKFSFGAGNL*LDKYSS
Trigger: TGAGCTGTATTTATCCAGCAACAGGTTTCCAGCCCC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGCCTTGGCTCTACAATaGTCTACCTTGTGCTGTCCT +
Preference number: 3 (lower is better)
Translates to: LTNPMVASSRTEACKFSFALALQ*STLCCP
Trigger: AGGACAGCACAAGGTAGACAATTGTAGAGCCAAGGC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTAGGGGAGAGAAGGGGTaGTTCGTGCCTACTGGGAAG +
Preference number: 3 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFRGEKG*FVPTGK
Trigger: CTTCCCAGTAGGCACGAACAACCCCTTCTCTCCCCT...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 72 bp TCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTaGTGGCAAAGCGACCAGGAGAGAGTTGATTTGCAT +
Preference number: 3 (lower is better)
Translates to: SLFFPFPGLNVS*WQSDQERVDLH
Trigger: ATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR TCA 72 bp CAGATGGCTTTAGTGGAGCTCGGCCTAACATATAACTaGGGAGTAATACAGGCACTGAGAGAATTTAGCTCC +
Preference number: 3 (lower is better)
Translates to: QMALVELGLTYN*GVIQALREFSS
Trigger: GGAGCTAAATTCTCTCAGTGCCTGTATTACTCCTCAGTTATATGTTAGGCCGAGCTCCACTAAAGCCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp AACATCCTGTCATTCTCTTGTTGTTCTCGTGGCCAGTaGAGAATGGAGAGTCTGGGACCAAAATTGAGTTGT +
Preference number: 3 (lower is better)
Translates to: NILSFSCCSRGQ*RMESLGPKLSC
Trigger: ACAACTCAATTTTGGTCCCAGACTCTCCATTCTGCACTGGCCACGAGAACAACAAGAGAATGACAGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp TCCCTCAAGGGTATTGCCAATTTAGAAAAGCACATCTaGACACTGGACTCTTGTTGGGCCTTGTGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: SLKGIANLEKHI*TLDSCWALCSL
Trigger: CAAACTACACAAGGCCCAACAAGAGTCCAGTGTGCAGATGTGCTTTTCTAAATTGGCAATACCCTTGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp GATAAACATGTGGGAACCTTGCTCCCTCAAGGGTATTaGCAATTTAGAAAAGCACATCTGCACACTGGACTC +
Preference number: 3 (lower is better)
Translates to: DKHVGTLLPQGY*QFRKAHLHTGL
Trigger: GAGTCCAGTGTGCAGATGTGCTTTTCTAAATTGGCAATACCCTTGAGGGAGCAAGGTTCCCACATGTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp TCTCCCTCCACACTTACAGACATACACCTGGTCATGTaGACCATCGAAACACAACTTGTTTGGATGGAAGAA +
Preference number: 3 (lower is better)
Translates to: SPSTLTDIHLVM*TIETQLVWMEE
Trigger: TTCTTCCATCCAAACAAGTTGTGTTTCGATGGTCCACATGACCAGGTGTATGTCTGTAAGTGTGGAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp ATGATCAGGATTGGCACACTCAGATCAGCCCACCAGTaGTCTTCACTTTGTGAAATGGAACTAATGCCACAA +
Preference number: 3 (lower is better)
Translates to: MIRIGTLRSAHQ*SSLCEMELMPQ
Trigger: TTGTGGCATTAGTTCCATTTCACAAAGTGAAGACCACTGGTGGGCTGATCTGAGTGTGCCAATCCTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp TTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTaGATCTTAAGACCTATGGGTAATGCTTCTGGAGTG +
Preference number: 3 (lower is better)
Translates to: FLDGKATRRELI*ILRPMGNASGV
Trigger: CACTCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTCAGGAGAGAGTTGATTaGCATCTTAAGACCTATGGG +
Preference number: 3 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFQERVD*HLKTYG
Trigger: CCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTG...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTGCGACCAGGAGAGAGTaGATTTGCATCTTAAGACCT +
Preference number: 3 (lower is better)
Translates to: FQSDSSISVLASCGQLSFATRRE*ICILRP
Trigger: AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR CAA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTTGGTCTGAATGTTTCTaGATGGCAAAGCGACCAGGA +
Preference number: 3 (lower is better)
Translates to: FQSDSSISVLASCGQLSFWSECF*MAKRPG
Trigger: TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCA...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
3UTR-3UTR CAA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGAGGAGTGGGCAGATCTaGATCAGTACAGTATTGGAG +
Preference number: 3 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVRSGQI*ISTVLE
Trigger: CTCCAATACTGTACTGATCAAGATCTGCCCACTCCT...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 72 bp TCCTTGCCCACCTTGGAGTGTTTCTTGTTGGTGCAATaGGTAAGAGAATTGGCTTTCAAGGAGATTAGCAAT +
Preference number: 3 (lower is better)
Translates to: SLPTLECFLLVQ*VRELAFKEISN
Trigger: ATTGCTAATCTCCTTGAAAGCCAATTCTCTTACTCATTGCACCAACAAGAAACACTCCAAGGTGGGCAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp CAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTaGCTTCAGAATGGTGATGATGTCTTCTTACAAAGG +
Preference number: 3 (lower is better)
Translates to: QCYRIKISMPSH*LQNGDDVFLQR
Trigger: CCTTTGTAAGAAGACATCATCACCATTCTGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp TCTGATGAAGAAGGTTTGATGTGGGGCCTGAGATTCTaGATTTCTAACAAGCTTACAGATGATGCTAACGCT +
Preference number: 3 (lower is better)
Translates to: SDEEGLMWGLRF*ISNKLTDDANA
Trigger: AGCGTTAGCATCATCTGTAAGCTTGTTAGAAATGCAGAATCTCAGGCCCCACATCAAACCTTCTTCATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp CAGGCAGAAACCAAAGACCTCAGAATGAGAAAGTCATaGTTTTCACGTCACAAATGTTACGTGTGGTCAGAT +
Preference number: 3 (lower is better)
Translates to: QAETKDLRMRKS*FSRHKCYVWSD
Trigger: ATCTGACCACACGTAACATTTGTGACGTGAAAACCATGACTTTCTCATTCTGAGGTCTTTGGTTTCTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp AAATCACAGTCTGTGCACACTTTTGGCCAGGAAGAGTaGCAGTGGAATCTTGCATGTCATTTGGTTGAAATT +
Preference number: 3 (lower is better)
Translates to: KSQSVHTFGQEE*QWNLACHLVEI
Trigger: AATTTCAACCAAATGACATGCAAGATTCCACTGCCACTCTTCCTGGCCAAAAGTGTGCACAGACTGTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGGTACTGTTTGTTGAGTaGCACTCTGGAGGAGGAGGA +
Preference number: 3 (lower is better)
Translates to: GCRFHELLNFAIKDNISTVLFVE*HSGGGG
Trigger: TCCTCCTCCTCCAGAGTGCAACTCAACAAACAGTAC...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTGGAGTGTACTGTTTGTaGAGTTGCACTCTGGAGGAG +
Preference number: 3 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFGVYCL*SCTLEE
Trigger: CTCCTCCAGAGTGCAACTCAACAAACAGTACACTCC...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGGGAGTGTACTGTTTGTaGAGTTGCACTCTGGAGGAG +
Preference number: 3 (lower is better)
Translates to: GCRFHELLNFAIKDNISTGVYCL*SCTLEE
Trigger: CTCCTCCAGAGTGCAACTCAACAAACAGTACACTCC...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTTCCCTAATGTTTATTTaGGCGGCAGTAGAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFSLMFI*AAVEKE
Trigger: TTCCTTCTCTACTGCCGCCAAAATAAACATTAGGGA...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp GTCATTTGGTTGAAATTAAGACTAAATCTCTATATGTaGACACACCCACACTCACACCCACACGCACACATA +
Preference number: 3 (lower is better)
Translates to: VIWLKLRLNLYM*THPHSHPHAHI
Trigger: TATGTGTGCGTGTGGGTGTGAGTGTGGGTGTGTGCACATATAGAGATTTAGTCTTAATTTCAACCAAATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp TGGAATAATGTTCTTTTGTCTCTAATACCCAGGCCTTaGAGAATTAGAATATGGCAGTTCAGTAGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: WNNVLLSLIPRP*RIRIWQFSRLW
Trigger: CCACAGCCTACTGAACTGCCATATTCTAATTCTCCAAGGCCTGGGTATTAGAGACAAAAGAACATTATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp TTAGAACATAACTGTTTCTGGGTACATATCGAGTTATaGCGCCAATATCAGAATTCACGTCTTTCCTTGCCC +
Preference number: 3 (lower is better)
Translates to: LEHNCFWVHIEL*RQYQNSRLSLP
Trigger: GGGCAAGGAAAGACGTGAATTCTGATATTGGCGCCATAACTCGATATGTACCCAGAAACAGTTATGTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAACGTGAAGACCTGAGATaGAGCGTGGATTTCTGTTCT +
Preference number: 3 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKREDLR*SVDFCS
Trigger: AGAACAGAAATCCACGCTCAATCTCAGGTCTTCACG...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGAACTCCAGTTCACGTTaGGGTGTTTCCAGTAATGGC +
Preference number: 3 (lower is better)
Translates to: GCRFHELLNFAIKDNISTNSSSR*GVSSNG
Trigger: GCCATTACTGGAAACACCCAAACGTGAACTGGAGTT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGGATCCTAACTGCAGGTaGGAGTTGAATTTTGTGCTT +
Preference number: 3 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVDPNCR*ELNFVL
Trigger: AAGCACAAAATTCAACTCCAACCTGCAGTTAGGATC...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGCGAAACACAACTTGTTaGGATGGAAGAAGAAAACTC +
Preference number: 3 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVRNTTC*DGRRKL
Trigger: GAGTTTTCTTCTTCCATCCAAACAAGTTGTGTTTCG...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGTTTGGAGTGTACTGTTaGTTGAGTTGCACTCTGGAG +
Preference number: 3 (lower is better)
Translates to: GCRFHELLNFAIKDNISTFGVYC*LSCTLE
Trigger: CTCCAGAGTGCAACTCAACAAACAGTACACTCCAAA...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTTGCACCTGTACAATATaGCACCAAAGCAACAACAGC +
Preference number: 3 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFCTCTI*HQSNNS
Trigger: GCTGTTGTTGCTTTGGTGCAATATTGTACAGGTGCA...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 72 bp ATCCTGTTTTCATCTAGAAGTAGTGCCTTAGCCATATaGAGGAGGGAACTGAGAACTTCTACATGTATGTCT +
Preference number: 3 (lower is better)
Translates to: ILFSSRSSALAI*RRELRTSTCMS
Trigger: AGACATACATGTAGAAGTTCTCAGTTCCCTCCTTCATATGGCTAAGGCACTACTTCTAGATGAAAACAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp AGTGCTTATCAATATTTCTGGTGCATACAGGTCACCTaGGGATTTGTTAAAAGGCCAATTCTGATGAAGAAG +
Preference number: 3 (lower is better)
Translates to: SAYQYFWCIQVT*GFVKRPILMKK
Trigger: CTTCTTCATCAGAATTGGCCTTTTAACAAATCCCCAGGTGACCTGTATGCACCAGAAATATTGATAAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTGATTTGACAATGGTTTaGTTCAGAGGGAACTCCAGT +
Preference number: 3 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFDLTMV*FRGNSS
Trigger: ACTGGAGTTCCCTCTGAACAAAACCATTGTCAAATC...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACAGTCTGGGACCAAAATaGAGTTGTTGCGCCATTAAA +
Preference number: 3 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDSLGPK*SCCAIK
Trigger: TTTAATGGCGCAACAACTCAATTTTGGTCCCAGACT...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 72 bp TGGATTGTATTAAGCACTTCTAGAGACATGATGTCATaGAGTTACGTATTAGGAAGATGGCAAGAGCAGTTC +
Preference number: 3 (lower is better)
Translates to: WIVLSTSRDMMS*SYVLGRWQEQF
Trigger: GAACTGCTCTTGCCATCTTCCTAATACGTAACTTCATGACATCATGTCTCTAGAAGTGCTTAATACAATCCA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 72 bp ATGAAGGTGGATCAGTCCTGGTTGAGATTCAAAAACTaGGACAACATGACACAGCTAGAGAATGTTGTTTAT +
Preference number: 3 (lower is better)
Translates to: MKVDQSWLRFKN*DNMTQLENVVY
Trigger: ATAAACAACATTCTCTAGCTGTGTCATGTTGTCTCAGTTTTTGAATCTCAACCAGGACTGATCCACCTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR TCA 72 bp TTACAGGAAAACAGGACTCTTTCTTATGTCCAATTCTaGCATTGTCAAAGGAAAACTGGTTGGCTAGGTTTG +
Preference number: 3 (lower is better)
Translates to: LQENRTLSYVQF*HCQRKTGWLGL
Trigger: CAAACCTAGCCAACCAGTTTTCCTTTGACAATGTCAGAATTGGACATAAGAAAGAGTCCTGTTTTCCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp CATATAGCCATGGACTTGAATTACTGTCAAGAGGTCTaGTTTCCCCAAATGATGAATTTGCATTTGTTTCCT +
Preference number: 3 (lower is better)
Translates to: HIAMDLNYCQEV*FPQMMNLHLFP
Trigger: AGGAAACAAATGCAAATTCATCATTTGGGGAAAGCAGACCTCTTGACAGTAATTCAAGTCCATGGCTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp TGGTCATGTGGACCATCGAAACACAACTTGTTTGGATaGAAGAAGAAAACTCTGCAGATGCTGTTATTTTTA +
Preference number: 3 (lower is better)
Translates to: WSCGPSKHNLFG*KKKTLQMLLFL
Trigger: TAAAAATAACAGCATCTGCAGAGTTTTCTTCTTCCATCCAAACAAGTTGTGTTTCGATGGTCCACATGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp TTTGCTCCTCAGTTTTCTATGGCCCAATTTTCCCATTaGAATAATGGGAATAATATGTCATCCACCTTACAG +
Preference number: 3 (lower is better)
Translates to: FAPQFSMAQFSH*NNGNNMSSTLQ
Trigger: CTGTAAGGTGGATGACATATTATTCCCATTATTCCAATGGGAAAATTGGGCCATAGAAAACTGAGGAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACCCATCGAAACACAACTaGTTTGGATGGAAGAAGAAA +
Preference number: 3 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDPSKHN*FGWKKK
Trigger: TTTCTTCTTCCATCCAAACAAGTTGTGTTTCGATGG...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAACCATCGAAACACAACTaGTTTGGATGGAAGAAGAAA +
Preference number: 3 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKPSKHN*FGWKKK
Trigger: TTTCTTCTTCCATCCAAACAAGTTGTGTTTCGATGG...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTTGGAATAATGTTCTTTaGTCTCTAATACCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFWNNVL*SLIPRP
Trigger: AGGCCTGGGTATTAGAGACAAAAGAACATTATTCCA...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR GCA 72 bp TCACTTTGTGAAATGGAACTAATGCCACAAGGAAACTaGATGGTTACTTCATCTGTTTACACATCTGCTTAT +
Preference number: 3 (lower is better)
Translates to: SLCEMELMPQGN*MVTSSVYTSAY
Trigger: ATAAGCAGATGTGTAAACAGATGAAGTAACCATGCAGTTTCCTTGTGGCATTAGTTCCATTTCACAAAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp GTTTATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTaGCTGCTTCGATCTGATTCAGATATATATATATAT +
Preference number: 3 (lower is better)
Translates to: VYSLSFLSEAGR*LLRSDSDIYIY
Trigger: ATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp CAGGTTAAAGCCATTAATTTAGAACATAACTGTTTCTaGGTACATATCGAGTTATGGCGCCAATATCAGAAT +
Preference number: 3 (lower is better)
Translates to: QVKAINLEHNCF*VHIELWRQYQN
Trigger: ATTCTGATATTGGCGCCATAACTCGATATGTACCCAGAAACAGTTATGTTCTAAATTAATGGCTTTAACCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CCA 72 bp TTGATAGAATTTAGGGTAGAATTATTCCTCTACTCTTaGAATAATGTTCTTTTGTCTCTAATACCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: LIEFRVELFLYS*NNVLLSLIPRP
Trigger: AGGCCTGGGTATTAGAGACAAAAGAACATTATTCCAAGAGTAGAGGAATAATTCTACCCTAAATTCTATCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAGTGGGTGGTGCCCACTaGCACGCTGACACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLVGGAH*HADTPG
Trigger: GCCCGGGGTGTCAGCGTGGCAGTGGGCACCACCCAC...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGCGGTGGTGCCGGCATaGTGGTGGTTGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ARALPEASLPVISSSRSQAVVPA*WWLWVA
Trigger: TGCCACCCACAACCACCAGCATGCCGGCACCACCGC...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCCTTTGGGGAAGGTGGTaGTGCTGGCGGTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGLWGRW*CWRWCR
Trigger: CCGGCACCACCGCCAGCAGCACCACCTTCCCCAAAG...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACCAGGGTGGACGGGCTaGCTCTGGAGTTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLPGWTG*LWSWAS
Trigger: GCTCGCCCAACTCCAGAGCCAGCCCGTCCACCCTGG...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAAGGGGATGCGGTGGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRRGCGG*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCCACCGCATCCCCT...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGACTGCAGCAAGGGCCCTaGCAGAGGCGTCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRLQQGP*QRRRFL
Trigger: CAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAG...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTATGGTGGCGCTGGCGGTaGTGGCTGCTGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLWWRWR*WLLLLL
Trigger: CAACAGCAGCAGCAGCCACCACCGCCAGCGCCACCA...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGGCTGCTGGTGGCGCTaGCGGTGGTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTGCWWR*RWWLLL
Trigger: CAGCAGCAGCCACCACCGCCAGCGCCACCAGCAGCC...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGCTGGCTGCCTTGCCTaGAGGAAGGGTGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGAGCLA*RKGGGW
Trigger: CCATCCTCCACCCTTCCTCCAGGCAAGGCAGCCAGC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAAGGGTCTGGTGGGCATaGTTGTCCTCCCGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ARALPEASLPVISSSRSQRVWWA*LSSREE
Trigger: CTCCTCCCGGGAGGACAACCATGCCCACCAGACCCT...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTTGGAGTTGGGCGAGCTaGGACAGGGGATGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLWSWAS*DRGCGG
Trigger: GCCACCGCATCCCCTGTCTCAGCTCGCCCAACTCCA...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGGGACGAGGCATCGGTaGAGAGCTTGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGGTRHR*RACCAA
Trigger: TGCTGCACAGCAAGCTCTTCACCGATGCCTCGTCCC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGACCTGGCTGTATTCCCTaGAGCACAAGCCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRPGCIP*STSPHP
Trigger: GGGGTGGGGGCTTGTGCTGCAGGGAATACAGCCAGG...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGATGCTGCTGGCGGTGGTaGCGGCATGCTGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRCCWRW*RHAGGC
Trigger: ACAACCACCAGCATGCCGGCACCACCGCCAGCAGCA...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTATGGCAGACAGGAGCTaGTGCTGCTGCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAMADRS*CCCWRR
Trigger: CCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGCCAT...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTTGGAGCAGGGTCTGGTaGGCATGGTTGTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAWSRVW*AWLSSR
Trigger: CCGGGAGGACAACCATGCCCACCAGACCCTGCTCCA...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCAGCTGCTGCTGCTGCTaGCGCAGGGTGTCGGCGATG +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSSCCCC*RRVSAM
Trigger: CATCGCCGACACCCTGCGCCAGCAGCAGCAGCAGCT...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTAGCTGCTGCTGCTGCTaGCGCAGGGTGTCGGCGATG +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLSCCCC*RRVSAM
Trigger: CATCGCCGACACCCTGCGCCAGCAGCAGCAGCAGCT...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGATCGGAGATTGGGGTGTaGGTGGTGCCCACTGCCACG +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRSEIGV*VVPTAT
Trigger: CGTGGCAGTGGGCACCACCCACACCCCAATCTCCGA...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGGGGCTATCGGAGATTaGGGTGTGGGTGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAGAIGD*GVGGAH
Trigger: GTGGGCACCACCCACACCCCAATCTCCGATAGCCCC...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTCATGGCGATCTCCGTaGAGGGGTTGCTGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSSWRSP*RGCCPA
Trigger: GGCGGGACAGCAACCCCTTCACGGAGATCGCCATGA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGTGAAGAGCTTGCTGTaGAGCAGCATGACTCGGGCG +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGVKSLL*SSMTRA
Trigger: CGCCCGAGTCATGCTGCTGCACAGCAAGCTCTTCAC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCAAGCTGGCGGTGAGATaGTCCAGCTTCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGKLAVR*SSFDSR
Trigger: CCTGGAGTCGAAGCTGGAGCATCTCACCGCCAGCTT...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACCCACCCCCGAGTCATaGAAGTGCCCAGAAGTGTCC +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLPTPES*KCPEVS
Trigger: GGACACTTCTGGGCACTTCCATGACTCGGGGGTGGG...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGGAAGGTGGTGCTGCTaGCGGTGGTGCCGGCATGCT +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTGRWCC*RWCRHA
Trigger: AGCATGCCGGCACCACCGCCAGCAGCACCACCTTCC...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTATCGCCAGGAATGGGGTaGATGGCGCACACCAGCATC +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLSPGMG*MAHTSI
Trigger: GATGCTGGTGTGCGCCATCCACCCCATTCCTGGCGA...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACAAGCTGCTGCTGCTGCTaGCGCAGGGTGTCGGCGATG +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTSCCCC*RRVSAM
Trigger: CATCGCCGACACCCTGCGCCAGCAGCAGCAGCAGCT...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGTCCTCTCTTTGGCTTaGTTCGGTTCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGVLSLA*FGSLGL
Trigger: CAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGAC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAGTGAAGAGCTTGCTGTaGAGCAGCATGACTCGGGCG +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLVKSLL*SSMTRA
Trigger: CGCCCGAGTCATGCTGCTGCACAGCAAGCTCTTCAC...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTTCCGCTTGTTGGCTTTaGGGAAGGTGGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFASACWL*GRWCCW
Trigger: CCAGCAGCACCACCTTCCCCAAAGCCAACAAGCGGA...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCAGCGGACCCCTCTTCTaGACTGGCTTCGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSSGPLF*TGFAVG
Trigger: GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCT...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTGCTGTGCAGCAGCATaGCTCGGGCGATCAGGTACA +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSCCAAA*LGRSGT
Trigger: TGTACCTGATCGCCCGAGTCATGCTGCTGCACAGCA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAAGGCAGAGCTTGCAGTaGGCTGAGATGGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTRQSLQ*AEMAPL
Trigger: CAGTGGCGCCATCTCAGCTCACTGCAAGCTCTGCCT...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTAAGCTGGCGGTGAGATaGTCCAGCTTCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLKLAVR*SSFDSR
Trigger: CCTGGAGTCGAAGCTGGAGCATCTCACCGCCAGCTT...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTGGTGCACCAGGGGGCTaGCCTGTCGGTGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFGAPGG*PVGAGC
Trigger: GCAGCCGGCACCGACAGGCCAGCCCCCTGGTGCACC...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACAAAAAGCTGGAGGGGTTaGCCCTCAGTCTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTKSWRG*PSVSAS
Trigger: CGAGGCCGAGACTGAGGGCCAACCCCTCCAGCTTTT...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCAGGAATGGGGTGGATaGCGCACACCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLQEWGG*RTPASP
Trigger: TGGAGATGCTGGTGTGCGCCATCCACCCCATTCCTG...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACATCGCCAGGAATGGGGTaGATGGCGCACACCAGCATC +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTSPGMG*MAHTSI
Trigger: GATGCTGGTGTGCGCCATCCACCCCATTCCTGGCGA...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTTGTACTCGCCAGGAATaGGGTGGATGGCGCACACCA +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLCTRQE*GGWRTP
Trigger: TGGTGTGCGCCATCCACCCCATTCCTGGCGAGTACA...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCCTGTCACAGGGCACTTaGCACCTAGATTTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGLSQGT*HLDLEV
Trigger: GACCTCCAAATCTAGGTGCCAAGTGCCCTGTGACAG...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAGGGCCTTGTGTAGTTTaGAAAGCCGACCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLGPCVV*KADPGF
Trigger: GAAACCGGGGTCGGCTTTCCAAACTACACAAGGCCC...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGCAGTCTCGGCCTCGATaGGGTTCCTCCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEQSRPR*GSSGRR
Trigger: GCGCCTCCCGGAGGAACCTCATCGAGGCCGAGACTG...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACATGCTGTGCAGCAGCATaGCTCGGGCGATCAGGTACA +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTCCAAA*LGRSGT
Trigger: TGTACCTGATCGCCCGAGTCATGCTGCTGCACAGCA...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGGGACGAGGCATCGGTaGAGAGCTTGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQGTRHR*RACCAA
Trigger: TGCTGCACAGCAAGCTCTTCACCGATGCCTCGTCCC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGATCCTCTGTTCCATCTTaGCGCTCCTCAACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRSSVPS*RSSTGG
Trigger: TCCACCAGTTGAGGAGCGTCAAGATGGAACAGAGGA...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCAGGTACAAGAAGGCATaGCATGAGAATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGRYKKA*HENPPA
Trigger: GGCAGGTGGATTCTCATGTCATGCCTTCTTGTACCT...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACATGCTGCTGCTGCTGCTaGTCATCCCCAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTCCCCC*SSPEDG
Trigger: TCCATCCTCTGGGGATGAGCAGCAGCAGCAGCAGCA...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTCCTGTCGGTGCCGGCTaGCTCCGCCAGGCCCACTTG +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFPVGAG*LRQAHL
Trigger: CAAGTGGGCCTGGCGGAGGCAGCCGGCACCGACAGG...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTGGAGAAGGCCAGGCGTaGCGTCCAGAAGAACTTGTA +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSGEGQA*RPEELV
Trigger: TACAAGTTCTTCTGGACGGCACGCCTGGCCTTCTCC...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTGCTTCGACTCCAGGCTaGCAATCTGCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSASTPG*QSASPG
Trigger: ACCTGGAGAAGCAGATTGGCAGCCTGGAGTCGAAGC...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGGCACTTGGCCCTTTTaGACTACTAACATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAGTWPF*TTNIWG
Trigger: GCCCCAGATGTTAGTAGTGCAAAAGGGCCAAGTGCC...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGTTAATCTGCCCCGATaGAACCTGGTTTGCACCTGT +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGVNLPR*NLVCTC
Trigger: ACAGGTGCAAACCAGGTTGCATCGGGGCAGATTAAC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGATTCCACAAATGTGCCTaGAGCTGTGAGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRFHKCA*SCEDSW
Trigger: CCAGCTGTCCTCACAGCTGCAGGCACATTTGTGGAA...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACACTCTCATTCCAGATaGCCTAAGCCTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLHSHSR*PKPGSG
Trigger: TCCAGACCCAGGCTTAGGGCATCTGGAATGAGAGTG...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTATGGACAGGGGCACTTaGGGTCTTCATCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLMDRGT*GLHPSP
Trigger: GGGACTTGGATGAAGACCCCAAGTGCCCCTGTCCAT...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGTGGAACTTGGAGAGTaGCCAAGCAAGTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGVELGE*PSKWSL
Trigger: CAATGACCACTTGCTTGGCCACTCTCCAAGTTCCAC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTACGTCCTGCTGGTCATaGTACCTTTCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFATSCWS*YLSQTR
Trigger: CCGTGTCTGTGAAAGGTACCATGACCAGCAGGACGT...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000361147.8
CDS-3UTR CCA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAACGCTCCTCAACTGGTaGATAGCTTGGAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: ARALPEASLPVISSSRSQTLLNW*IAWRNF
Trigger: GAAGTTCCTCCAAGCTATCCACCAGTTGAGGAGCGT...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAACCCCTCTTCTGGACTaGCTTCGCTGTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRTPLLD*LRCWLL
Trigger: AAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGT...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCAAGCAATGGCAGGGGTaGGGGTGGTTCTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGKQWQG*GWFCIS
Trigger: AGAAATACAGAACCACCCCCACCCCTGCCATTGCTT...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCGGGCCTTGTGTAGTTTaGAAAGCCGACCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSGPCVV*KADPGF
Trigger: GAAACCGGGGTCGGCTTTCCAAACTACACAAGGCCC...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGCACAGTGGCTCACTTTaGGAGGCCCAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQHSGSL*EAQAGG
Trigger: TCCACCTGCCTGGGCCTCCCAAAGTGAGCCACTGTG...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCTTGCAGATGTCGCGTaGCAGGCCTGGTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLLADVA*QAWYQQ
Trigger: TTGCTGATACCAGGCCTGCCACGCGACATCTGCAAG...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS-3UTR TCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAAGAAAGAAGAGGGGGTaGAAGAACTCTCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRRKKRG*KNSLRR
Trigger: CCTCCTGAGAGAGTTCTTTCACCCCCTCTTCTTTCT...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTCAGTCTCGGCCTCGATaGGGTTCCTCCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFQSRPR*GSSGRR
Trigger: GCGCCTCCCGGAGGAACCTCATCGAGGCCGAGACTG...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGGTCTGAATGTTTCTTaGTGGCAAAGCGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAGLNVS*WQSDQE
Trigger: CTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACC...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAATTCCTTGTCCTTCTTaGGTGAAGCTGGACGTTGGC +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLIPCPS*VKLDVG
Trigger: GCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAAT...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGGCAGGAGAATTGCATaGACCCAGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTGRRIA*TQEAEL
Trigger: AAGCTCTGCCTCCTGGGTTCATGCAATTCTCCTGCC...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCACCTGTCGGTGCCGGCTaGCTCCGCCAGGCCCACTTG +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSPVGAG*LRQAHL
Trigger: CAAGTGGGCCTGGCGGAGGCAGCCGGCACCGACAGG...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGTTCTCCACCAACTCTaGAGCAAGGGCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQVLHQL*SKGPAR
Trigger: TCTGGCAGGGCCCTTGCTGCAGAGTTGGTGGAGAAC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAGTTAATCTGCCCCGATaGAACCTGGTTTGCACCTGT +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLVNLPR*NLVCTC
Trigger: ACAGGTGCAAACCAGGTTGCATCGGGGCAGATTAAC...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTCCAGGGTGGACGGGCTaGCTCTGGAGTTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESPGWTG*LWSWAS
Trigger: GCTCGCCCAACTCCAGAGCCAGCCCGTCCACCCTGG...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGTGGCCAGTGCAGAATaGAGAGTCTGGGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRVASAE*RVWDQN
Trigger: ATTTTGGTCCCAGACTCTCCATTCTGCACTGGCCAC...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGCTCTTTGCTGGCTCTaGCTGTTCATGTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQALCWL*LFMSCR
Trigger: CCGGCAGGACATGAACAGCCAGAGCCAGCAAAGAGC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCAGCTGTGAGGACAGCTaGAGAGATCTGTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGSCEDS*RDLLSF
Trigger: GAAAGACAACAGATCTCTCCAGCTGTCCTCACAGCT...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCACTGCAGGTTGGAGTTaGATTTTGTGCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGTAGWS*ILCFSS
Trigger: GGAGGAAAAGCACAAAATTCAACTCCAACCTGCAGT...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGTCCTCTCTTTGGCTTaGTTCGGTTCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQVLSLA*FGSLGL
Trigger: CAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGAC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATTGCTGTCCCGCCGGTaGACCAGGGGGCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRLLSRR*TRGLAC
Trigger: ACAGGCCAGCCCCCTGGTGCACCGGCGGGACAGCAA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGCCCCACCGCTATACTTaGAGGAGCTCATGGCGATCT +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQPHRYT*RSSWRS
Trigger: AGATCGCCATGAGCTCCTGCAAGTATAGCGGTGGGG...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTGCGGTGGTGCCGGCATaGTGGTGGTTGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESAVVPA*WWLWVA
Trigger: TGCCACCCACAACCACCAGCATGCCGGCACCACCGC...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCGAAGGACATTGGCTaGAGCATTCTTGATCCGCTT +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLPKDIG*SILDPL
Trigger: AAGCGGATCAAGAATGCTGCAGCCAATGTCCTTCGG...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGCTTCGACTCCAGGCTaGCAATCTGCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQASTPG*QSASPG
Trigger: ACCTGGAGAAGCAGATTGGCAGCCTGGAGTCGAAGC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAAGGAGCTGCTGCTGCTaGTGGCGCAGGGTGTCGGCG +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGRSCCC*WRRVSA
Trigger: CGCCGACACCCTGCGCCAGCAGCAGCAGCAGCTCCT...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGGCTGGAAACCTGTTaGTGGATAAATACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRGLETC*WINTAQ
Trigger: CTGAGCTGTATTTATCCAGCAACAGGTTTCCAGCCC...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAAGAAGGGGTTGTTCGTaGCTACTGGGAAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTRRGCS*LLGSHQ
Trigger: CTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCT...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACATGTTCTCGTGGCCAGTaGAGAATGGAGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTCSRGQ*RMESLG
Trigger: TCCCAGACTCTCCATTCTGCACTGGCCACGAGAACA...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTCATGTATGTCTCAGCTaGTCTGTAGAGAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAHVCLS*SVEKEG
Trigger: CCCCTCTTTCTCTACAGAGCAGCTGAGACATACATG...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTTGGAGGAACTTCCTCTaGTGTTTCCTCACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAWRNFL*CFLTLA
Trigger: TGCCAAAGTGAGGAAACACCAGAGGAAGTTCCTCCA...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTAACTGGTGGATAGCTTaGAGGAACTTCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFANWWIA*RNFLWC
Trigger: ACACCAGAGGAAGTTCCTCCAAGCTATCCACCAGTT...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTTGACGCTCCTCAACTaGTGGATAGCTTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSLTLLN*WIAWRN
Trigger: GTTCCTCCAAGCTATCCACCAGTTGAGGAGCGTCAA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCAGCGGACCCCTCTTCTaGACTGGCTTCGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPSGPLF*TGFAVG
Trigger: GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCT...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGCACCAAGATTAACATaGCACAGTAGGAACAGGCTA +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGAPRLT*HSRNRL
Trigger: TAGCCTGTTCCTACTGTGCCATGTTAATCTTGGTGC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTTTCCTCCACCAGCTTaGTTGGTCACGATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSFPPPA*LVTMCL
Trigger: GAGACACATCGTGACCAACCAAGCTGGTGGAGGAAA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTCTCAGAAACAGTCATTaGGAGAGCAGGCTGACAGTG +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSLRNSH*ESRLTV
Trigger: CACTGTCAGCCTGCTCTCCCAATGACTGTTTCTGAG...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTCCTTGATAAACATGTaGGAACCTTGCTCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGSLINM*EPCSLK
Trigger: CTTGAGGGAGCAAGGTTCCCACATGTTTATCAAGGA...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGAAGAAGGTTTGATGTaGGGCCTGAGATTCTGCATT +
Preference number: 4 (lower is better)
Translates to: ARALPEASLPVISSSRSQEEGLM*GLRFCI
Trigger: AATGCAGAATCTCAGGCCCCACATCAAACCTTCTTC...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGGAAGGAGGTGGAGCTaGCCCCAATGGGGCTATCGG +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIGRRWS*PQWGYR
Trigger: CCGATAGCCCCATTGGGGTCAGCTCCACCTCCTTCC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAAGTCACAGACCACAATaGATAAATCACAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: ARALPEASLPVISSSRSQSHRPQ*INHSLC
Trigger: GCACAGACTGTGATTTATTCATTGTGGTCTGTGACT...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCCGTAACATCAAGGTGTaGTCTAGATACAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGRNIKV*SRYSQS
Trigger: AGACTGACTGTATCTAGATCACACCTTGATGTTACG...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACAGAGTGTACTGTTTGTTaGGTTGCACTCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTECTVC*VALWRR
Trigger: CCTCCTCCAGAGTGCAACTCAACAAACAGTACACTC...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTTACTAGTTACGTCCTaGTGGTCATGGTACCTTTCA +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGLLVTS*WSWYLS
Trigger: TGAAAGGTACCATGACCAGCAGGACGTAACTAGTAA...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000361147.8
CDS-3UTR GCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACCGAAGGACATTGGCTaGAGCATTCTTGATCCGCTT +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTPKDIG*SILDPL
Trigger: AAGCGGATCAAGAATGCTGCAGCCAATGTCCTTCGG...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGAGGAGCTGCTGCTGCTaGTGGCGCAGGGTGTCGGCG +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMRSCCC*WRRVSA
Trigger: CGCCGACACCCTGCGCCAGCAGCAGCAGCAGCTCCT...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGCAGACAGGAGCTGCTaGTGCTGCTGGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGADRSC*CCWRRV
Trigger: CACCCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGC...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAATGGCAGACAGGAGCTaGTGCTGCTGCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGMADRS*CCCWRR
Trigger: CCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGCCAT...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCACTGCAGCAAGGGCCCTaGCAGAGGCGTCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSLQQGP*QRRRFL
Trigger: CAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAG...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAAAGCTGGACGTTGGCTaGTTCGATCTGATTCAGATA +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRKLDVG*FDLIQI
Trigger: TATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTT...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTGGGGCCTGAGATTCTaGATTTCTAACAAGCTTACA +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGWGLRF*ISNKLT
Trigger: TGTAAGCTTGTTAGAAATGCAGAATCTCAGGCCCCA...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAATGGGGCCTGAGATTCTaGATTTCTAACAAGCTTACA +
Preference number: 4 (lower is better)
Translates to: ARALPEASLPVISSSRSQWGLRF*ISNKLT
Trigger: TGTAAGCTTGTTAGAAATGCAGAATCTCAGGCCCCA...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAATATCAATATTTCTGGTaGATACAGGTCACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ARALPEASLPVISSSRSQYQYFW*IQVTWG
Trigger: TCCCCAGGTGACCTGTATGCACCAGAAATATTGATA...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGTGCCAGCTCAGTCCCTaGAAGGAGTGTCCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQCQLSP*KECPLS
Trigger: GCTTAAAGGACACTCCTTGCAGGGACTGAGCTGGCA...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGTGCCTGGAGGAAGGGTaGAGGATGGCGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMECLEEG*RMAVEL
Trigger: CAACTCCACCGCCATCCTCCACCCTTCCTCCAGGCA...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGGTGCACCAGGGGGCTaGCCTGTCGGTGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFGAPGG*PVGAGC
Trigger: GCAGCCGGCACCGACAGGCCAGCCCCCTGGTGCACC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCTAGGGCTGAAAAGCTaGAGGGGTTGGCCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPLGLKS*RGWPSV
Trigger: GACTGAGGGCCAACCCCTCCAGCTTTTCAGCCCTAG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCAACTGGTGGATAGCTTaGAGGAACTTCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSNWWIA*RNFLWC
Trigger: ACACCAGAGGAAGTTCCTCCAAGCTATCCACCAGTT...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTCGGAGATTGGGGTGTaGGTGGTGCCCACTGCCACG +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHISEIGV*VVPTAT
Trigger: CGTGGCAGTGGGCACCACCCACACCCCAATCTCCGA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACCACAGTGGCTCACTTTaGGAGGCCCAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYHSGSL*EAQAGG
Trigger: TCCACCTGCCTGGGCCTCCCAAAGTGAGCCACTGTG...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTGGGTCTGGACACATGTaGTCAATACACATCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSGSGHM*SIHILD
Trigger: ATCCAGGATGTGTATTGACCACATGTGTCCAGACCC...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp TCATCAAGCCCACCGACTGCAAGGGGAGAGAAGGGGTaGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSPPTARGEKG*FVPTGKSPDSC
Trigger: ACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTCTCCCCTTGCAGTCGGTGGGCTTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTTTCCGTTCCCTGGTCTaGATGTTTCTTGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLFRSLV*MFLDGK
Trigger: TTTGCCATCAAGAAACATTCAGACCAGGGAACGGAA...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAGGAAGAAAACTTGGGTaGGCTACACCCAGAATAATT +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLGRKLG*ATPRII
Trigger: AATTATTCTGGGTGTAGCTCACCCAAGTTTTCTTCC...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAGTCTGGGACCAAAATTaGGTTGTTGCGCCATTAAAA +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLVWDQN*VVAPLK
Trigger: TTTTAATGGCGCAACAACTCAATTTTGGTCCCAGAC...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTGGCCTAACATATAACTaGGGAGTAATACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSGLTYN*GVIQAL
Trigger: CAGTGCCTGTATTACTCCTCAGTTATATGTTAGGCC...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTAGGCAGAGCTTGCAGTaGGCTGAGATGGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFRQSLQ*AEMAPL
Trigger: CAGTGGCGCCATCTCAGCTCACTGCAAGCTCTGCCT...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACATTACTGGTGAGATGCTaGGTTCCTCAAGGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTLLVRC*VPQGKN
Trigger: GTTCTTCCCTTGAGGAACTCAGCATCTCACCAGTAA...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACATGTGTCCTTGAGCTTTaGGCACAGCAATGGAAACCT +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTCVLEL*AQQWKP
Trigger: AGGTTTCCATTGCTGTGCTCAAAGCTCAAGGACACA...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAAGGGGATGCGGTGGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGRGCGG*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCCACCGCATCCCCT...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATTTGCTGTCCCGCCGGTaGACCAGGGGGCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHLLSRR*TRGLAC
Trigger: ACAGGCCAGCCCCCTGGTGCACCGGCGGGACAGCAA...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCCCACCGCTATACTTaGAGGAGCTCATGGCGATCT +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPPHRYT*RSSWRS
Trigger: AGATCGCCATGAGCTCCTGCAAGTATAGCGGTGGGG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCTCCAGGCTGCCAATCTaGTTCTCCAGGTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPSRLPI*FSRSSL
Trigger: GAGCGAAGACCTGGAGAAGCAGATTGGCAGCCTGGA...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGTGGGTGGTGCCCACTaGCACGCTGACACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFVGGAH*HADTPG
Trigger: GCCCGGGGTGTCAGCGTGGCAGTGGGCACCACCCAC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAATGTCTGCACACACATaGACAATTTCTTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLMSAHT*TISCPL
Trigger: GAGAGGACAAGAAATTGTGCATGTGTGTGCAGACAT...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTATAAATCACAGTCTGTaGACACTTTTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAINHSL*TLLARK
Trigger: CTTCCTGGCCAAAAGTGTGCACAGACTGTGATTTAT...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACACTAAGCTCCAGCCCCTaGAATTTCATTTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTLSSSP*NFICLS
Trigger: GGAAAGGCAAATGAAATTGCAGGGGCTGGAGCTTAG...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGGCTGCTGGTGGCGCTaGCGGTGGTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFGCWWR*RWWLLL
Trigger: CAGCAGCAGCCACCACCGCCAGCGCCACCAGCAGCC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCAGCTGGCTGCCTTGCCTaGAGGAAGGGTGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSAGCLA*RKGGGW
Trigger: CCATCCTCCACCCTTCCTCCAGGCAAGGCAGCCAGC...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTAAAAGCTGGAGGGGTTaGCCCTCAGTCTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESKSWRG*PSVSAS
Trigger: CGAGGCCGAGACTGAGGGCCAACCCCTCCAGCTTTT...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATGGAGCAGGGTCTGGTaGGCATGGTTGTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSWSRVW*AWLSSR
Trigger: CCGGGAGGACAACCATGCCCACCAGACCCTGCTCCA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACTAGTTACGTCCTGCTaGTCATGGTACCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTLVTSC*SWYLSQ
Trigger: CTGTGAAAGGTACCATGACCAGCAGGACGTAACTAG...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000361147.8
CDS-3UTR CCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACATGGAGGAACTTCCTCTaGTGTTTCCTCACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTWRNFL*CFLTLA
Trigger: TGCCAAAGTGAGGAAACACCAGAGGAAGTTCCTCCA...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGACCAGAGTGTTGGCTTaGTCACTCAGCTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQTRVLA*SLSFLC
Trigger: ACAGAGGAAGCTGAGTGACCAAGCCAACACTCTGGT...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGATCGGAGATTGGGGTGTaGGTGGTGCCCACTGCCACG +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGSEIGV*VVPTAT
Trigger: CGTGGCAGTGGGCACCACCCACACCCCAATCTCCGA...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGTAATGCTTCTGGAGTaGGGAGATTTATTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGVMLLE*GDLFSN
Trigger: GTTGCTAAATAAATCTCCCCACTCCAGAAGCATTAC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGATGTAGGAAGAAAACTTaGGTGAGCTACACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRCRKKT*VSYTQN
Trigger: ATTCTGGGTGTAGCTCACCCAAGTTTTCTTCCTACA...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTATGTAGGAAGAAAACTTaGGTGAGCTACACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLCRKKT*VSYTQN
Trigger: ATTCTGGGTGTAGCTCACCCAAGTTTTCTTCCTACA...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTTCTATTCATGCAGCCTaGCACAAGCTTTCTACTACC +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSSIHAA*HKLSTT
Trigger: GGTAGTAGAAAGCTTGTGCCAGGCTGCATGAATAGA...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCGAAGAAGGTTTGATGTaGGGCCTGAGATTCTGCATT +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSEEGLM*GLRFCI
Trigger: AATGCAGAATCTCAGGCCCCACATCAAACCTTCTTC...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCAAAGGAAGCCATATTTaGAGCTGGTCTAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSKGSHI*SWSKLQ
Trigger: CTGGAGCTTAGACCAGCTCCAAATATGGCTTCCTTT...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGGGCCCATGGAGCTGTaGAGAGTTCACTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIGPMEL*RVHWDS
Trigger: GGAGTCCCAGTGAACTCTCCACAGCTCCATGGGCCC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATGGGTGGCATTAGGGTaGTGGAGCAGGGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSWVALG*WSRVWW
Trigger: CCACCAGACCCTGCTCCATCACCCTAATGCCACCCA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGACCAGCATCTCCAGGCTaGTGTACAGGATGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGPASPG*CTGCAR
Trigger: ACGAGCGCATCCTGTACATCAGCCTGGAGATGCTGG...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAGGAAGGAGGTGGAGCTaGCCCCAATGGGGCTATCGG +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGGRRWS*PQWGYR
Trigger: CCGATAGCCCCATTGGGGTCAGCTCCACCTCCTTCC...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCAATGTGCATTATGTCTaGAGGGATCCACATCTTCAG +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSNVHYV*RDPHLQ
Trigger: CTGAAGATGTGGATCCCTTCAGACATAATGCACATT...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACAAGGGTTATAGCAGAATaGAAACGGTGGGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTRVIAE*KRWVGI
Trigger: GATTCCTACCCACCGTTTTCATTCTGCTATAACCCT...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTGGAAGAAAACTTGGGTaGGCTACACCCAGAATAATT +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLGRKLG*ATPRII
Trigger: AATTATTCTGGGTGTAGCTCACCCAAGTTTTCTTCC...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTCTACTGGTAGTGCAATaGCTTCACAGTATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSLLVVQ*LHSISV
Trigger: AACTGAGATACTGTGAAGTCATTGCACTACCAGTAG...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGATATGAAGGAGGGAACTaGGAACTTCTACATGTATGT +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRYEGGN*ELLHVC
Trigger: ACATACATGTAGAAGTTCTCAGTTCCCTCCTTCATA...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTGACCTCTTTAGATTaGAGTCCAAGGCACTTTTTA +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLLTSLD*SPRHFL
Trigger: TAAAAAGTGCCTTGGACTTCAATCTAAAGAGGTCAG...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTGCTGCTGCTGCTGCTaGTCATCCCCAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHICCCCC*SSPEDG
Trigger: TCCATCCTCTGGGGATGAGCAGCAGCAGCAGCAGCA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAACTTTGGGGAAGGTGGTaGTGCTGGCGGTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQLWGRW*CWRWCR
Trigger: CCGGCACCACCGCCAGCAGCACCACCTTCCCCAAAG...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTGTGAAGAGCTTGCTGTaGAGCAGCATGACTCGGGCG +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFVKSLL*SSMTRA
Trigger: CGCCCGAGTCATGCTGCTGCACAGCAAGCTCTTCAC...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAGATTTATTTAGCAACTaGTTGAACTTGTGTACGGGG +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLDLFSN*LNLCTG
Trigger: CCCCGTACACAAGTTCAAGCAGTTGCTAAATAAATC...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACACTTATCCCTCCTGAATaGCAACAATTTTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTLIPPE*QQFWLG
Trigger: GCCAAGCCAAAATTGTTGGCATTCAGGAGGGATAAG...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTATGTCTGCACACACATaGACAATTTCTTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLMSAHT*TISCPL
Trigger: GAGAGGACAAGAAATTGTGCATGTGTGTGCAGACAT...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTGAAGAACAGGCCCAGTaGTACAGAATAAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSEEQAQ*YRIKIS
Trigger: GGAGATTTTTATTCTGTAGCACTGGGCCTGTTCTTC...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTACGATGTGTCTCTTTTaGTTGTTTCAACACATAGCC +
Preference number: 4 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFATMCLF*LFQHIA
Trigger: GGCTATGTGTTGAAACAAGCAAAAGAGACACATCGT...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTCTCAAGGATATGGAGTaGTATTTAGGTAAGACCGGA +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSLKDME*YLGKTG
Trigger: TCCGGTCTTACCTAAATAGCACTCCATATCCTTGAG...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTGCCTTCCAGAGGACCTaGCCTGAGGTTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESAFQRT*PEVPPD
Trigger: ATCAGGTGGAACCTCAGGGCAGGTCCTCTGGAAGGC...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATTCTCTGGGGCTGCCTaGAGTCCAGACGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRFSGAA*SPDAAT
Trigger: AGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACCCCCCACCAGTATCTTaGCTCCAGTCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYPPPVS*LQSSLW
Trigger: CCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGG...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAATGGTGGCGCTGGCGGTaGTGGCTGCTGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQWWRWR*WLLLLL
Trigger: CAACAGCAGCAGCAGCCACCACCGCCAGCGCCACCA...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATGCCTGGAGGAAGGGTaGAGGATGGCGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRCLEEG*RMAVEL
Trigger: CAACTCCACCGCCATCCTCCACCCTTCCTCCAGGCA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATCGCCAGGAATGGGGTaGATGGCGCACACCAGCATC +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSSPGMG*MAHTSI
Trigger: GATGCTGGTGTGCGCCATCCACCCCATTCCTGGCGA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAGGGGCTATCGGAGATTaGGGTGTGGGTGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGGAIGD*GVGGAH
Trigger: GTGGGCACCACCCACACCCCAATCTCCGATAGCCCC...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGGGGGCTATCGGAGATTaGGGTGTGGGTGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMGAIGD*GVGGAH
Trigger: GTGGGCACCACCCACACCCCAATCTCCGATAGCCCC...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACGAGTATATCTGTTTTaGCAAGTTGTGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTRVYLF*QVVGSS
Trigger: AGAGCTGCCCACAACTTGCCAAAACAGATATACTCG...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGACCTGAAGCGAACGTaGGATGTGTATGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQDLKRT*DVYVCT
Trigger: TGTACACACATACACATCCCACGTTCGCTTCAGGTC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTGTGAAACTCAGAATGTaGCCAGAACTAGCTAACTAC +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLVKLRM*PELANY
Trigger: GTAGTTAGCTAGTTCTGGCCACATTCTGAGTTTCAC...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCTGAAAAAGTGGCCTTaGCTCTACAATTGTCTACCT +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSLKKWP*LYNCLP
Trigger: AGGTAGACAATTGTAGAGCCAAGGCCACTTTTTCAG...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAACAAAGGAAAACTGGTTaGCTAGGTTTGAGACTTATA +
Preference number: 4 (lower is better)
Translates to: ARALPEASLPVISSSRSQQRKTG*LGLRLI
Trigger: TATAAGTCTCAAACCTAGCCAACCAGTTTTCCTTTG...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTTACAAATCCAATGGTaGCCAGCAGTAGAACTGAAG +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSLQIQW*PAVELK
Trigger: CTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGCATCTCCAGGCTaGTGTACAGGATGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRPASPG*CTGCAR
Trigger: ACGAGCGCATCCTGTACATCAGCCTGGAGATGCTGG...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAGGAAGGAGGTGGAGCTaGCCCCAATGGGGCTATCGG +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELGRRWS*PQWGYR
Trigger: CCGATAGCCCCATTGGGGTCAGCTCCACCTCCTTCC...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGTAGGAACAGGCTACTaGCAAATCCATGTCCACTTA +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQVGTGY*QIHVHL
Trigger: TAAGTGGACATGGATTTGTCAGTAGCCTGTTCCTAC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACAGCTTATATGTTCAGCTaGACTGTCACTGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTAYMFS*TVTENR
Trigger: CCTGTTTTCAGTGACAGTTCAGCTGAACATATAAGC...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGGCTGTAGGTTTAAATaGTCAGGATTGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQGCRFK*SGLAHS
Trigger: TGAGTGTGCCAATCCTGATCATTTAAACCTACAGCC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAACTCCTGACCTCAGGTaGTCCTCTCGCCTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGTPDLR*SSRLAQ
Trigger: TTGGGCAAGGCGAGAGGATCACCTGAGGTCAGGAGT...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTATGAAGGAGGGAACTaGGAACTTCTACATGTATGT +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSYEGGN*ELLHVC
Trigger: ACATACATGTAGAAGTTCTCAGTTCCCTCCTTCATA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAATCTGTAAATCTATGTaGATTTTCAGGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GPARGVASCHLLFPLPSRICKSM*IFRAWE
Trigger: TTCCCAAGCCCTGAAAATTCACATAGATTTACAGAT...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTGGCAGGAGAATTGCATaGACCCAGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFGRRIA*TQEAEL
Trigger: AAGCTCTGCCTCCTGGGTTCATGCAATTCTCCTGCC...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTGATGGAATACAACTTTaGGGGGAAAGGTCAGAATAT +
Preference number: 4 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLDGIQL*GERSEY
Trigger: ATATTCTGACCTTTCCCCTCAAAGTTGTATTCCATC...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTTGGCCCTGCCTATTATaGAAGTGTCACCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFWPCLL*KCHHGG
Trigger: GCCCCCATGGTGACACTTTCATAATAGGCAGGGCCA...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAAAGCTGGCGGTGAGATaGTCCAGCTTCGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGKLAVR*SSFDSR
Trigger: CCTGGAGTCGAAGCTGGAGCATCTCACCGCCAGCTT...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTAGGAGCTGCTGCTGCTaGTGGCGCAGGGTGTCGGCG +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFRSCCC*WRRVSA
Trigger: CGCCGACACCCTGCGCCAGCAGCAGCAGCAGCTCCT...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGCAGACAGGAGCTGCTaGTGCTGCTGGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFADRSC*CCWRRV
Trigger: CACCCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAATGGCAGACAGGAGCTaGTGCTGCTGCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQMADRS*CCCWRR
Trigger: CCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGCCAT...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCCTGCAGCAAGGGCCCTaGCAGAGGCGTCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFLQQGP*QRRRFL
Trigger: CAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAG...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCGGGGTGCCTATTGTATaGAGGGTAAGGTGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPGVPIV*RVRCQV
Trigger: GACTTGACACCTTACCCTGCATACAATAGGCACCCC...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGTACTGTTTGTTGAGTTaGACTCTGGAGGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQYCLLS*TLEEEE
Trigger: TTCCTCCTCCTCCAGAGTGCAACTCAACAAACAGTA...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTATCAAGCCCACCGACTaGAAGGGGAGAGAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFIKPTD*KGREGV
Trigger: AACCCCTTCTCTCCCCTTGCAGTCGGTGGGCTTGAT...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGATTCACGTCTTTCCTTaGCCACCTTGGAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQIHVFP*PPWSVS
Trigger: AGAAACACTCCAAGGTGGGCAAGGAAAGACGTGAAT...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGATTCCCATCCCCTGGCTaGCAAGCCTTCCTACTCACA +
Preference number: 4 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGFPSPG*QAFLLT
Trigger: TGTGAGTAGGAAGGCTTGGCAGCCAGGGGATGGGAA...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACTTGCTTCGGTTCTCTaGGGCTGCCTGGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRLASVL*GCLESR
Trigger: TCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAG...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTGGAAGGTGGTGCTGCTaGCGGTGGTGCCGGCATGCT +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPGRWCC*RWCRHA
Trigger: AGCATGCCGGCACCACCGCCAGCAGCACCACCTTCC...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGGGCCAACGAAAACATaGAGTCCTTTGAGTACAAAC +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQGPTKT*SPLSTN
Trigger: GTTTGTACTCAAAGGACTCCATGTTTTCGTTGGCCC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCACAGGAATGGGGTGGATaGCGCACACCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSQEWGG*RTPASP
Trigger: TGGAGATGCTGGTGTGCGCCATCCACCCCATTCCTG...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCACGCTCCTCAACTGGTaGATAGCTTGGAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPTLLNW*IAWRNF
Trigger: GAAGTTCCTCCAAGCTATCCACCAGTTGAGGAGCGT...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCACCAGAGTGTTGGCTTaGTCACTCAGCTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPTRVLA*SLSFLC
Trigger: ACAGAGGAAGCTGAGTGACCAAGCCAACACTCTGGT...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGACCCCTCTTCTGGACTaGCTTCGCTGTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMETPLLD*LRCWLL
Trigger: AAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGT...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTGTTTTGGCAAGTTGTaGGCAGCTCTCTTTTACTTT +
Preference number: 4 (lower is better)
Translates to: NSAARALPEASLPVISSSCFGKL*AALFYF
Trigger: AAAGTAAAAGAGAGCTGCCCACAACTTGCCAAAACA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGTGAAACTCAGAATGTaGCCAGAACTAGCTAACTAC +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTVKLRM*PELANY
Trigger: GTAGTTAGCTAGTTCTGGCCACATTCTGAGTTTCAC...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACTGAAAAAGTGGCCTTaGCTCTACAATTGTCTACCT +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTLKKWP*LYNCLP
Trigger: AGGTAGACAATTGTAGAGCCAAGGCCACTTTTTCAG...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCAAGCAATGGCAGGGGTaGGGGTGGTTCTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPKQWQG*GWFCIS
Trigger: AGAAATACAGAACCACCCCCACCCCTGCCATTGCTT...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACATGAAGCTTTAATATaGCTTAAGCAATGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTHEALI*LKQWQG
Trigger: CCCCTGCCATTGCTTAAGCCATATTAAAGCTTCATG...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACACTAATACCCAGGCCTTaGAGAATTAGAATATGGCAG +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTLIPRP*RIRIWQ
Trigger: CTGCCATATTCTAATTCTCCAAGGCCTGGGTATTAG...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGTCCTTGATAAACATGTaGGAACCTTGCTCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQSLINM*EPCSLK
Trigger: CTTGAGGGAGCAAGGTTCCCACATGTTTATCAAGGA...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTATTCCTTGATTCTAGATaGAATACAACTTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLFLDSR*NTTLRG
Trigger: TCCCCTCAAAGTTGTATTCCATCTAGAATCAAGGAA...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGGGACGAGGCATCGGTaGAGAGCTTGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHGTRHR*RACCAA
Trigger: TGCTGCACAGCAAGCTCTTCACCGATGCCTCGTCCC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGATCCACAGAGAGATGCTaGACACGAGCAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGSTERC*TRAAQC
Trigger: GCACTGTGCTGCTCGTGTTCAGCATCTCTCTGTGGA...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGCTTCTCCGCTTTGGTaGGTTCCAGCTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSASPLW*VPAFGP
Trigger: TGGCCCGAAAGCTGGAACTCACCAAAGCGGAGAAGC...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAGCTTCTCCGCTTTGGTaGGTTCCAGCTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGASPLW*VPAFGP
Trigger: TGGCCCGAAAGCTGGAACTCACCAAAGCGGAGAAGC...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGCACTTCTAGAGACATaGTGTCATGAAGTTACGTAT +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTALLET*CHEVTY
Trigger: ATACGTAACTTCATGACATCATGTCTCTAGAAGTGC...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGCGTAACATCAAGGTGTaGTCTAGATACAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQRNIKV*SRYSQS
Trigger: AGACTGACTGTATCTAGATCACACCTTGATGTTACG...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTAGCAACAACAGCAAGTaGGGGTCCCAGGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESSNNSK*GSQVRR
Trigger: TCTTCTCACCTGGGACCCTCACTTGCTGTTGTTGCT...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATGGCCCTGCCTATTATaGAAGTGTCACCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRWPCLL*KCHHGG
Trigger: GCCCCCATGGTGACACTTTCATAATAGGCAGGGCCA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACATCTCCATCTATAACCTaGAGCAAAACACCAAACAAC +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTSPSIT*SKTPNN
Trigger: GTTGTTTGGTGTTTTGCTTCAGGTTATAGATGGAGA...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS-3UTR GCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATCCAGGCTGCCAATCTaGTTCTCCAGGTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSSRLPI*FSRSSL
Trigger: GAGCGAAGACCTGGAGAAGCAGATTGGCAGCCTGGA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACGTGGGTGGTGCCCACTaGCACGCTGACACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDVGGAH*HADTPG
Trigger: GCCCGGGGTGTCAGCGTGGCAGTGGGCACCACCCAC...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGATTTATTTAGCAACTaGTTGAACTTGTGTACGGGG +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTDLFSN*LNLCTG
Trigger: CCCCGTACACAAGTTCAAGCAGTTGCTAAATAAATC...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTGTTCTCCACCAACTCTaGAGCAAGGGCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNAVLHQL*SKGPAR
Trigger: TCTGGCAGGGCCCTTGCTGCAGAGTTGGTGGAGAAC...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGCGGCATCTCTGGTATaGAAAACAACTAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTAASLV*KTTNES
Trigger: ACTTTCATTAGTTGTTTTGCATACCAGAGATGCCGC...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAACGATCTTGGCTCACTaGAACCTCCACTTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGTILAH*NLHFRG
Trigger: ACCCCGGAAGTGGAGGTTGCAGTGAGCCAAGATCGT...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCATGTATGTCTCAGCTaGTCTGTAGAGAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPHVCLS*SVEKEG
Trigger: CCCCTCTTTCTCTACAGAGCAGCTGAGACATACATG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGCTCAAGGATATGGAGTaGTATTTAGGTAAGACCGGA +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQLKDME*YLGKTG
Trigger: TCCGGTCTTACCTAAATAGCACTCCATATCCTTGAG...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAGCCTTCCAGAGGACCTaGCCTGAGGTTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGAFQRT*PEVPPD
Trigger: ATCAGGTGGAACCTCAGGGCAGGTCCTCTGGAAGGC...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATTCCCATCCCCTGGCTaGCAAGCCTTCCTACTCACA +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSFPSPG*QAFLLT
Trigger: TGTGAGTAGGAAGGCTTGGCAGCCAGGGGATGGGAA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGAGCTCTAAGGAGTAGGTaGCAGCTCAGTCCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRALRSR*QLSPCK
Trigger: CTTGCAGGGACTGAGCTGGCACCTACTCCTTAGAGC...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS-3UTR CCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGACTCCAGTCCTCTCTTTaGCTTGCTTCGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGLQSSL*LASVLW
Trigger: CCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAG...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGTGTAGCTGTGGAACTTaGAGAGTGGCCAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMECSCGT*RVAKQV
Trigger: CACTTGCTTGGCCACTCTCCAAGTTCCACAGCTACA...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGCTAGGGCTGAAAAGCTaGAGGGGTTGGCCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMLGLKS*RGWPSV
Trigger: GACTGAGGGCCAACCCCTCCAGCTTTTCAGCCCTAG...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGTCCGCTTGTTGGCTTTaGGGAAGGTGGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMSACWL*GRWCCW
Trigger: CCAGCAGCACCACCTTCCCCAAAGCCAACAAGCGGA...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGATGTACTCGCCAGGAATaGGGTGGATGGCGCACACCA +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGCTRQE*GGWRTP
Trigger: TGGTGTGCGCCATCCACCCCATTCCTGGCGAGTACA...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGTTCCTCACTTTGGCATaGTCAATCTTCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQFLTLA*SIFFSS
Trigger: GCTGCTAAAGAAGATTGACCATGCCAAAGTGAGGAA...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACAGTAATGCTTCTGGAGTaGGGAGATTTATTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTVMLLE*GDLFSN
Trigger: GTTGCTAAATAAATCTCCCCACTCCAGAAGCATTAC...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGGTTCAAAGACCCCCATaGCGAAGAGCCCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMVQRPP*RRAHPP
Trigger: TGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAAC...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACACACAACTTGTTTGGATaGAAGAAGAAAACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTHNLFG*KKKTLQ
Trigger: CTGCAGAGTTTTCTTCTTCCATCCAAACAAGTTGTG...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTGTCTGTGCACACTTTTaGCCAGGAAGAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESVCAHF*PGRVAV
Trigger: CACTGCCACTCTTCCTGGCCAAAAGTGTGCACAGAC...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCAGTGAAGCTGGACGTTaGCTGCTTCGATCTGATTCA +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPSEAGR*LLRSDS
Trigger: TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACCTCTTGTTGTTCTCGTaGCCAGTGCAGAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYLLLFS*PVQNGE
Trigger: CTCTCCATTCTGCACTGGCCACGAGAACAACAAGAG...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGCTCTTTGCTGGCTCTaGCTGTTCATGTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSALCWL*LFMSCR
Trigger: CCGGCAGGACATGAACAGCCAGAGCCAGCAAAGAGC...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGGAGGCCCAGGCAGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHGGPGR*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCTGCCTGGGCCTCC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGCTTATCAATATTTCTaGTGCATACAGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQAYQYF*CIQVTW
Trigger: CCAGGTGACCTGTATGCACCAGAAATATTGATAAGC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCACAGCAATGGAAACCTaGCGACTCTTCCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHITAMET*RLFLEL
Trigger: GAGCTCCAGGAAGAGTCGCCAGGTTTCCATTGCTGT...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp ATCTGCACACTGGACTCTTGTTGGGCCTTGTGTAGTTaGGAAAGCCGACCCCGGTTTCACGTACATGGAGAA +
Preference number: 4 (lower is better)
Translates to: ICTLDSCWALCS*ESRPRFHVHGE
Trigger: TTCTCCATGTACGTGAAACCGGGGTCGGCTTTCCAAACTACACAAGGCCCAACAAGAGTCCAGTGTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCGGCTGTAGGTTTAAATaGTCAGGATTGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPGCRFK*SGLAHS
Trigger: TGAGTGTGCCAATCCTGATCATTTAAACCTACAGCC...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTCTCCAGTCACTCCCTTaGCTAGTGTTGCTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESLQSLP*LVLLVW
Trigger: CCAAACTAGCAACACTAGTCAAGGGAGTGACTGGAG...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAACTCCTGACCTCAGGTaGTCCTCTCGCCTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQTPDLR*SSRLAQ
Trigger: TTGGGCAAGGCGAGAGGATCACCTGAGGTCAGGAGT...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAGAGTGTACTGTTTGTTaGGTTGCACTCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGECTVC*VALWRR
Trigger: CCTCCTCCAGAGTGCAACTCAACAAACAGTACACTC...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTGCTGCCACTCAAGAATaGATTGTATTGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFAATQE*IVLGRE
Trigger: CTCCCTGCCCAATACAATGCATTCTTGAGTGGCAGC...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGTCGGTTCTCTGGGGCTaGCTGGAGTCCAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVSVLWG*LESRRC
Trigger: GCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGA...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGCCTGGCTGTATTCCCTaGAGCACAAGCCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVPGCIP*STSPHP
Trigger: GGGGTGGGGGCTTGTGCTGCAGGGAATACAGCCAGG...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTGGAGAAGGCCAGGCGTaGCGTCCAGAAGAACTTGTA +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNAGEGQA*RPEELV
Trigger: TACAAGTTCTTCTGGACGGCACGCCTGGCCTTCTCC...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAGGGGTGCCTATTGTATaGAGGGTAAGGTGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGGVPIV*RVRCQV
Trigger: GACTTGACACCTTACCCTGCATACAATAGGCACCCC...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTATCTGTTTACACATCTaGTTATATGTTCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSICLHI*LYVQLN
Trigger: GTTCAGCTGAACATATAAGCAGATGTGTAAACAGAT...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATGTTCTCGTGGCCAGTaGAGAATGGAGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRCSRGQ*RMESLG
Trigger: TCCCAGACTCTCCATTCTGCACTGGCCACGAGAACA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGGCAGCCCGGCTCTTTaGTGGCTCTGGCTGTTCATG +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFGSPAL*WLWLFM
Trigger: CATGAACAGCCAGAGCCAGCAAAGAGCCGGGCTGCC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGGCAGCCCGGCTCTTTaGTGGCTCTGGCTGTTCATG +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFGSPAL*WLWLFM
Trigger: CATGAACAGCCAGAGCCAGCAAAGAGCCGGGCTGCC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTCAAATTTTTAGCTATTaGCTTATGGGAACCACAGAA +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSQIFSY*LMGTTE
Trigger: TTCTGTGGTTCCCATAAGGCAATAGCTAAAAATTTG...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTCACTGGGACTCCTCTaGCTTCTAAGACACAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESSLGLL*LLRHRF
Trigger: GAACCTGTGTCTTAGAAGGCAGAGGAGTCCCAGTGA...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTTCTCTGGGGCTGCCTaGAGTCCAGACGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPFSGAA*SPDAAT
Trigger: AGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACTCCAGTCCTCTCTTTaGCTTGCTTCGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRLQSSL*LASVLW
Trigger: CCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAG...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGAGGGTCTGGTGGGCATaGTTGTCCTCCCGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVRVWWA*LSSREE
Trigger: CTCCTCCCGGGAGGACAACCATGCCCACCAGACCCT...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGTGGAGGAACTTCCTCTaGTGTTTCCTCACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEWRNFL*CFLTLA
Trigger: TGCCAAAGTGAGGAAACACCAGAGGAAGTTCCTCCA...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACGACCTGAAGCGAACGTaGGATGTGTATGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYDLKRT*DVYVCT
Trigger: TGTACACACATACACATCCCACGTTCGCTTCAGGTC...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGAATGCCAACAATTTTaGCTTGGCATCCATTTCAAA +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTECQQF*LGIHFK
Trigger: TTTGAAATGGATGCCAAGCCAAAATTGTTGGCATTC...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTGAGTTTGAGATGTATTaGAATAGTTTTTCGCACCAA +
Preference number: 4 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSEFEMY*NSFSHQ
Trigger: TTGGTGCGAAAAACTATTCCAATACATCTCAAACTC...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTTGTTGTTCTACCACTaGCCCCTGCTGAGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNALLFYH*PLLRSV
Trigger: GACCGACCTCAGCAGGGGCCAGTGGTAGAACAACAA...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACACTCCAGTTCACGTTTaGGTGTTTCCAGTAATGGCG +
Preference number: 4 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYTPVHV*VFPVMA
Trigger: CGCCATTACTGGAAACACCCAAACGTGAACTGGAGT...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGAAGCCATATTTGGAGCTaGTCTAAGCTCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRSHIWS*SKLQPL
Trigger: CAGGGGCTGGAGCTTAGACCAGCTCCAAATATGGCT...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATCATTTCCCATCCCCTaGCTGCCAAGCCTTCCTACT +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSSFPIP*LPSLPT
Trigger: AGTAGGAAGGCTTGGCAGCCAGGGGATGGGAAATGA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGATCATTTCCCATCCCCTaGCTGCCAAGCCTTCCTACT +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGSFPIP*LPSLPT
Trigger: AGTAGGAAGGCTTGGCAGCCAGGGGATGGGAAATGA...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTTGGAGTTGGGCGAGCTaGGACAGGGGATGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFWSWAS*DRGCGG
Trigger: GCCACCGCATCCCCTGTCTCAGCTCGCCCAACTCCA...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTGCTGTGCAGCAGCATaGCTCGGGCGATCAGGTACA +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPCCAAA*LGRSGT
Trigger: TGTACCTGATCGCCCGAGTCATGCTGCTGCACAGCA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGCTTCTCCGCTTTGGTaGGTTCCAGCTTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFASPLW*VPAFGP
Trigger: TGGCCCGAAAGCTGGAACTCACCAAAGCGGAGAAGC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCCTCTGTTCCATCTTaGCGCTCCTCAACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNASSVPS*RSSTGG
Trigger: TCCACCAGTTGAGGAGCGTCAAGATGGAACAGAGGA...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTGCTAACTACCTGAACTaGAAGCACCCCATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFANYLN*KHPMFR
Trigger: TCTGAACATGGGGTGCTTTCAGTTCAGGTAGTTAGC...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCGTGGTCTTCACTTTGTaGAATGGAACTAATGCCACA +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPVVFTL*NGTNAT
Trigger: TGTGGCATTAGTTCCATTTCACAAAGTGAAGACCAC...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGGAGTGGGCAGATCTTaGTCAGTACAGTATTGGAGT +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIGVGRS*SVQYWS
Trigger: ACTCCAATACTGTACTGATCAAGATCTGCCCACTCC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTCTTGTCCTTCTTGAGTaGAGCTGGACGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNALVLLE*SWTLAA
Trigger: AGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAG...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGCTTGTCCTTCTTGAGTaGAGCTGGACGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMLVLLE*SWTLAA
Trigger: AGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAG...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGGAGCTACTAAAGGAGTaGTGGCTTTTAAAATCTCTT +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQELLKE*WLLKSL
Trigger: AAGAGATTTTAAAAGCCATCACTCCTTTAGTAGCTC...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGAAGTGCCTTAGCCATATaGAGGAGGGAACTGAGAACT +
Preference number: 4 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGSALAI*RRELRT
Trigger: AGTTCTCAGTTCCCTCCTTCATATGGCTAAGGCACT...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTAGTGCCTTAGCCATATaGAGGAGGGAACTGAGAACT +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESSALAI*RRELRT
Trigger: AGTTCTCAGTTCCCTCCTTCATATGGCTAAGGCACT...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGAGGGAGTTCTTACTGGTaGGATGCTGAGTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRGSSYW*DAEFLK
Trigger: CTTGAGGAACTCAGCATCTCACCAGTAAGAACTCCC...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGGGAGTTCTTACTGGTaGGATGCTGAGTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGGSSYW*DAEFLK
Trigger: CTTGAGGAACTCAGCATCTCACCAGTAAGAACTCCC...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGACTGGAGTCCAGACGCTaGCACTCAAGAATGCATTGT +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGLESRR*HSRMHC
Trigger: ACAATGCATTCTTGAGTGGCAGCGTCTGGACTCCAG...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGACCGAAGGACATTGGCTaGAGCATTCTTGATCCGCTT +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGPKDIG*SILDPL
Trigger: AAGCGGATCAAGAATGCTGCAGCCAATGTCCTTCGG...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTGGGCTGGAAACCTGTTaGTGGATAAATACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESGLETC*WINTAQ
Trigger: CTGAGCTGTATTTATCCAGCAACAGGTTTCCAGCCC...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAATCTGTTTACACATCTaGTTATATGTTCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTICLHI*LYVQLN
Trigger: GTTCAGCTGAACATATAAGCAGATGTGTAAACAGAT...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTCATGTGTTTCTAGGATaGCAGTGGCTACTGCTACCA +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFHVFLG*QWLLLP
Trigger: TGGTAGCAGTAGCCACTGGCATCCTAGAAACACATG...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATCACCCAAGCTGGAGTaGAATGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSSPKLE*NGTILA
Trigger: AGCCAAGATCGTGCCATTGCACTCCAGCTTGGGTGA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAAGAAGGGGTTGTTCGTaGCTACTGGGAAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGRRGCS*LLGSHQ
Trigger: CTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCT...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACCCTGATAAAAACAAGTaGCCTGGAGTTCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYPDKNK*PGVQMA
Trigger: AGCCATCTGAACTCCAGGGCACTTGTTTTTATCAGG...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGTTCCACAAATGTGCCTaGAGCTGTGAGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMFHKCA*SCEDSW
Trigger: CCAGCTGTCCTCACAGCTGCAGGCACATTTGTGGAA...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGAGTGGAACTTGGAGAGTaGCCAAGCAAGTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRVELGE*PSKWSL
Trigger: CAATGACCACTTGCTTGGCCACTCTCCAAGTTCCAC...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTACGTCCTGCTGGTCATaGTACCTTTCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNATSCWS*YLSQTR
Trigger: CCGTGTCTGTGAAAGGTACCATGACCAGCAGGACGT...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000361147.8
CDS-3UTR CCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAACGCTCCTCAACTGGTaGATAGCTTGGAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGTLLNW*IAWRNF
Trigger: GAAGTTCCTCCAAGCTATCCACCAGTTGAGGAGCGT...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTGTTCAAAGACCCCCATaGCGAAGAGCCCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPVQRPP*RRAHPP
Trigger: TGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAAC...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGCAGGTGCGGCATCTCTaGTATGCAAAACAACTAATG +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEQVRHL*YAKQLM
Trigger: CATTAGTTGTTTTGCATACCAGAGATGCCGCACCTG...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCTTAAATGATCAGGATTaGCACACTCAGATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPLNDQD*HTQISP
Trigger: TGGGCTGATCTGAGTGTGCCAATCCTGATCATTTAA...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTATTGTTGTTCTACCACTaGCCCCTGCTGAGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELLLFYH*PLLRSV
Trigger: GACCGACCTCAGCAGGGGCCAGTGGTAGAACAACAA...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGGAAAGGATACTGTCTaGGGCGTCATCAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHGKDTV*GVIKPT
Trigger: GGTGGGCTTGATGACGCCCCAGACAGTATCCTTTCC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCACTCTTGTTGTTCTCGTaGCCAGTGCAGAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSLLLFS*PVQNGE
Trigger: CTCTCCATTCTGCACTGGCCACGAGAACAACAAGAG...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAAGCACATCTGCACACTaGACTCTTGTTGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGSTSAH*TLVGPC
Trigger: ACAAGGCCCAACAAGAGTCCAGTGTGCAGATGTGCT...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGTTAGCTATTGCCTTATaGGAACCACAGAAATGGATT +
Preference number: 4 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQLAIAL*EPQKWI
Trigger: AATCCATTTCTGTGGTTCCCATAAGGCAATAGCTAA...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGAAAGGAAGCCATATTTaGAGCTGGTCTAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEKGSHI*SWSKLQ
Trigger: CTGGAGCTTAGACCAGCTCCAAATATGGCTTCCTTT...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAAGGGCCCATGGAGCTGTaGAGAGTTCACTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQGPMEL*RVHWDS
Trigger: GGAGTCCCAGTGAACTCTCCACAGCTCCATGGGCCC...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCTAACCAGAGCAAGTTaGTTCATTACAAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPLTRAS*FITSCH
Trigger: GTGACAGCTTGTAATGAACCAACTTGCTCTGGTTAG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAACAGCAATGGAAACCTaGCGACTCTTCCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSTAMET*RLFLEL
Trigger: GAGCTCCAGGAAGAGTCGCCAGGTTTCCATTGCTGT...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp TCCTCCACCAGCTTGGTTGGTCACGATGTGTCTCTTTaGCTTGTTTCAACACATAGCCCAGGCCCAAGATTA +
Preference number: 4 (lower is better)
Translates to: SSTSLVGHDVSL*LVSTHSPGPRL
Trigger: TAATCTTGGGCCTGGGCTATGTGTTGAAACAAGCAAAAGAGACACATCGTGACCAACCAAGCTGGTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCAAACATGGAGTCCTTTaGGTACAAACCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIKHGVL*VQTPRE
Trigger: CTCTCTTGGGGTTTGTACTCAAAGGACTCCATGTTT...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTCCAGCATCTCCAGGCTaGTGTACAGGATGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFPASPG*CTGCAR
Trigger: ACGAGCGCATCCTGTACATCAGCCTGGAGATGCTGG...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTCCACAGAGAGATGCTaGACACGAGCAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPSTERC*TRAAQC
Trigger: GCACTGTGCTGCTCGTGTTCAGCATCTCTCTGTGGA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAGGTCTGAATGTTTCTTaGTGGCAAAGCGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGGLNVS*WQSDQE
Trigger: CTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACC...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGGTGGTCTTCACTTTGTaGAATGGAACTAATGCCACA +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEVVFTL*NGTNAT
Trigger: TGTGGCATTAGTTCCATTTCACAAAGTGAAGACCAC...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTAGGTACAAGAAGGCATaGCATGAGAATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNARYKKA*HENPPA
Trigger: GGCAGGTGGATTCTCATGTCATGCCTTCTTGTACCT...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTTGCAGTGTCTCTTCTaGTTGACACTGTATACAGGG +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHILQCLF*LTLYTG
Trigger: CCCTGTATACAGTGTCAATCAGAAGAGACACTGCAA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAATGCTGCTGCTGCTGCTaGTGCTCATCCCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQCCCCC*CSSPED
Trigger: ATCCTCTGGGGATGAGCAGCAGCAGCAGCAGCAGCA...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTTGCTGCTGCTGCTGCTaGTGCTCATCCCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFCCCCC*CSSPED
Trigger: ATCCTCTGGGGATGAGCAGCAGCAGCAGCAGCAGCA...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGTGCTGCTGGCGGTGGTaGCGGCATGCTGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTCCWRW*RHAGGC
Trigger: ACAACCACCAGCATGCCGGCACCACCGCCAGCAGCA...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTCCAGGCTGCCAATCTaGTTCTCCAGGTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPSRLPI*FSRSSL
Trigger: GAGCGAAGACCTGGAGAAGCAGATTGGCAGCCTGGA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTGCTTCGACTCCAGGCTaGCAATCTGCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPASTPG*QSASPG
Trigger: ACCTGGAGAAGCAGATTGGCAGCCTGGAGTCGAAGC...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCAGGAGAGAGTTGATTTaGATCTTAAGACCTATGGGT +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPRRELI*ILRPMG
Trigger: ACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCT...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGGCACTTGGCCCTTTTaGACTACTAACATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHGTWPF*TTNIWG
Trigger: GCCCCAGATGTTAGTAGTGCAAAAGGGCCAAGTGCC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATTCACCCAAGCTGGAGTaGAATGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHSPKLE*NGTILA
Trigger: AGCCAAGATCGTGCCATTGCACTCCAGCTTGGGTGA...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTCGATGCAACCTGGTTTaGACCTGTACAATATTGCAC +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFRCNLV*TCTILH
Trigger: GTGCAATATTGTACAGGTGCAAACCAGGTTGCATCG...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAACACTCTCATTCCAGATaGCCTAAGCCTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQHSHSR*PKPGSG
Trigger: TCCAGACCCAGGCTTAGGGCATCTGGAATGAGAGTG...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGACAGGGGCACTTaGGGTCTTCATCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPMDRGT*GLHPSP
Trigger: GGGACTTGGATGAAGACCCCAAGTGCCCCTGTCCAT...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTGAGTGGCCAAGCAAGTaGTCATTGAGATTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNAEWPSK*SLRLSW
Trigger: CCAGCTCAATCTCAATGACCACTTGCTTGGCCACTC...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATGTAGCTGTGGAACTTaGAGAGTGGCCAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSCSCGT*RVAKQV
Trigger: CACTTGCTTGGCCACTCTCCAAGTTCCACAGCTACA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGGTTTTTCCGCTTGTTaGCTTTGGGGAAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHGFSAC*LWGRWC
Trigger: GCACCACCTTCCCCAAAGCCAACAAGCGGAAAAACC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGTGTACTCGCCAGGAATaGGGTGGATGGCGCACACCA +
Preference number: 4 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVCTRQE*GGWRTP
Trigger: TGGTGTGCGCCATCCACCCCATTCCTGGCGAGTACA...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGACCAGAGTGTTGGCTTaGTCACTCAGCTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMTRVLA*SLSFLC
Trigger: ACAGAGGAAGCTGAGTGACCAAGCCAACACTCTGGT...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTCAGGAAGAGTGGCAGTaGAATCTTGCATGTCATTTG +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESQEEWQ*NLACHL
Trigger: CAAATGACATGCAAGATTCCACTGCCACTCTTCCTG...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACCATGAAGCTTTAATATaGCTTAAGCAATGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYHEALI*LKQWQG
Trigger: CCCCTGCCATTGCTTAAGCCATATTAAAGCTTCATG...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTGGAAAGGATACTGTCTaGGGCGTCATCAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPGKDTV*GVIKPT
Trigger: GGTGGGCTTGATGACGCCCCAGACAGTATCCTTTCC...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGCTCAGAAACAGTCATTaGGAGAGCAGGCTGACAGTG +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMLRNSH*ESRLTV
Trigger: CACTGTCAGCCTGCTCTCCCAATGACTGTTTCTGAG...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTCCGGTTTCACGTACATaGAGAAACTCAGAATGCCTA +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFPVSRT*RNSECL
Trigger: TAGGCATTCTGAGTTTCTCCATGTACGTGAAACCGG...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCACACTGGACTCTTGTTaGGCCTTGTGTAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHITLDSC*ALCSLE
Trigger: TTCCAAACTACACAAGGCCCAACAAGAGTCCAGTGT...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTAGCACATCTGCACACTaGACTCTTGTTGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNASTSAH*TLVGPC
Trigger: ACAAGGCCCAACAAGAGTCCAGTGTGCAGATGTGCT...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTCTGATGCTGATGTGTaGAGAAAACTGGGCACTAGA +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESSDADV*RKLGTR
Trigger: TCTAGTGCCCAGTTTTCTCCACACATCAGCATCAGA...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGTTACAAATCCAATGGTaGCCAGCAGTAGAACTGAAG +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMELQIQW*PAVELK
Trigger: CTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAA...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAGATGAGCCAGAAGGCTaGGCTGGTGATTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELDEPEG*AGDSGL
Trigger: AAGTCCTGAATCACCAGCCCAGCCTTCTGGCTCATC...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618040.4
CDS-3UTR CCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGACGTCCTGCTGGTCATaGTACCAAGCAGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMTSCWS*YQAGSD
Trigger: ATCACTTCCTGCTTGGTACCATGACCAGCAGGACGT...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618040.4
CDS-3UTR TCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAATGGGTGGCATTAGGGTaGTGGAGCAGGGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKWVALG*WSRVWW
Trigger: CCACCAGACCCTGCTCCATCACCCTAATGCCACCCA...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATATTTAGCAACTGCTTaGACTTGTGTACGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSYLATA*TCVRGR
Trigger: CCGACCCCGTACACAAGTTCAAGCAGTTGCTAAATA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAAGGGTTATAGCAGAATaGAAACGGTGGGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGRVIAE*KRWVGI
Trigger: GATTCCTACCCACCGTTTTCATTCTGCTATAACCCT...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTAGTCACAGACCACAATaGATAAATCACAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFSHRPQ*INHSLC
Trigger: GCACAGACTGTGATTTATTCATTGTGGTCTGTGACT...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTATCAGTTGTGGTACTGTaGTGGGAGCAACACCGTTTG +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELSVVVL*WEQHRL
Trigger: CAAACGGTGTTGCTCCCATCACAGTACCACAACTGA...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCAACTGCAGGTTGGAGTTaGATTTTGTGCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSTAGWS*ILCFSS
Trigger: GGAGGAAAAGCACAAAATTCAACTCCAACCTGCAGT...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGTTCTTGTTGGTGCAATaGGTAAGAGAATTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEFLLVQ*VRELAF
Trigger: GAAAGCCAATTCTCTTACTCATTGCACCAACAAGAA...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACCTGACCTCTTTAGATTaGAGTCCAAGGCACTTTTTA +
Preference number: 4 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYLTSLD*SPRHFL
Trigger: TAAAAAGTGCCTTGGACTTCAATCTAAAGAGGTCAG...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTGTGTCCTTGAGCTTTaGGCACAGCAATGGAAACCT +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNACVLEL*AQQWKP
Trigger: AGGTTTCCATTGCTGTGCTCAAAGCTCAAGGACACA...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTAGTATAATGTGTCCTTaGGCTTTGAGCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFSIMCP*ALSTAM
Trigger: CATTGCTGTGCTCAAAGCTCAAGGACACATTATACT...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGAAGTGTCTCTTCTGATTaGCACTGTATACAGGGCATG +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRSVSSD*HCIQGM
Trigger: CATGCCCTGTATACAGTGTCAATCAGAAGAGACACT...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGACCCTTTTTCTGGGTaGCCGGCAATCACTAACAGT +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHDPFSG*PAITNS
Trigger: ACTGTTAGTGATTGCCGGGCACCCAGAAAAAGGGTC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCTTATTAAACTGGCTTTaGAGAGCTACTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPLLNWL*RATKGV
Trigger: CACTCCTTTAGTAGCTCTGCAAAGCCAGTTTAATAA...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTCCAAACAACTGTCCTTaGAGATGTCGCGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFPNNCP*RCRVAG
Trigger: GCCTGCCACGCGACATCTGCAAGGACAGTTGTTTGG...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATAAGAATGCATTGTATTaGGCAGGGAGGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHKNALY*AGRESR
Trigger: CCTGCTCTCCCTCCCTGCCCAATACAATGCATTCTT...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTCCCCCACCAGTATCTTaGCTCCAGTCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFPPPVS*LQSSLW
Trigger: CCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGG...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACCCCACCCCCGAGTCATaGAAGTGCCCAGAAGTGTCC +
Preference number: 4 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDPTPES*KCPEVS
Trigger: GGACACTTCTGGGCACTTCCATGACTCGGGGGTGGG...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTGGTTTTTCCGCTTGTTaGCTTTGGGGAAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPGFSAC*LWGRWC
Trigger: GCACCACCTTCCCCAAAGCCAACAAGCGGAAAAACC...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTATTGACGCTCCTCAACTaGTGGATAGCTTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELLTLLN*WIAWRN
Trigger: GTTCCTCCAAGCTATCCACCAGTTGAGGAGCGTCAA...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGACAGAGATTAGATTTCTaGTTTCAAGGCATGTCGGAC +
Preference number: 4 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGQRLDF*FQGMSD
Trigger: GTCCGACATGCCTTGAAACCAGAAATCTAATCTCTG...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTACCCCTCTTCTGGACTaGCTTCGCTGTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPTPLLD*LRCWLL
Trigger: AAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGT...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGATTTGGCCAGGAAGAGTaGCAGTGGAATCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGFGQEE*QWNLAC
Trigger: ACATGCAAGATTCCACTGCCACTCTTCCTGGCCAAA...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTGTCTGTGCACACTTTTaGCCAGGAAGAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPVCAHF*PGRVAV
Trigger: CACTGCCACTCTTCCTGGCCAAAAGTGTGCACAGAC...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCAACAGTATCTCAGTTGTaGTACTGTGATGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSTVSQL*YCDGSN
Trigger: GTTGCTCCCATCACAGTACCACAACTGAGATACTGT...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGATCTATTCATGCAGCCTaGCACAAGCTTTCTACTACC +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGSIHAA*HKLSTT
Trigger: GGTAGTAGAAAGCTTGTGCCAGGCTGCATGAATAGA...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGTGGCCAGTGCAGAATaGAGAGTCTGGGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQVASAE*RVWDQN
Trigger: ATTTTGGTCCCAGACTCTCCATTCTGCACTGGCCAC...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATGCCCCGATGCAACCTaGTTTGCACCTGTACAATAT +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSCPDAT*FAPVQY
Trigger: ATATTGTACAGGTGCAAACCAGGTTGCATCGGGGCA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGGGAGGCCCAGGCAGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTGGPGR*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCTGCCTGGGCCTCC...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCAGCCATATTTGGAGCTaGTCTAAGCTCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFSHIWS*SKLQPL
Trigger: CAGGGGCTGGAGCTTAGACCAGCTCCAAATATGGCT...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGACTAACCAGAGCAAGTTaGTTCATTACAAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGLTRAS*FITSCH
Trigger: GTGACAGCTTGTAATGAACCAACTTGCTCTGGTTAG...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTATCTTACAAATCCAATaGTGGCCAGCAGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFILQIQ*WPAVEL
Trigger: CAGTTCTACTGCTGGCCACCATTGGATTTGTAAGAT...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp CAATCACTAACAGTGATGTGTACTCAGAAACAGTCATaGGGAGAGCAGGCTGACAGTGGACCTGCTAAACAC +
Preference number: 4 (lower is better)
Translates to: QSLTVMCTQKQS*GEQADSGPAKH
Trigger: GTGTTTAGCAGGTCCACTGTCAGCCTGCTCTCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp GCTGGGCTCCATGTCCTTGATAAACATGTGGGAACCTaGCTCCCTCAAGGGTATTGCCAATTTAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: AGLHVLDKHVGT*LPQGYCQFRKA
Trigger: TGCTTTTCTAAATTGGCAATACCCTTGAGGGAGCAAGGTTCCCACATGTTTATCAAGGACATGGAGCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp CTTCCTGGAGCTCTAGGGACTTCTAACCAGAGCAAGTaGGTTCATTACAAGCTGTCACACCACAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LPGALGTSNQSK*VHYKLSHHRKR
Trigger: TCTCTTTCTGTGGTGTGACAGCTTGTAATGAACCAACTTGCTCTGGTTAGAAGTCCCTAGAGCTCCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTAGAAAGAAGAGGGGGTaGAAGAACTCTCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFRKKRG*KNSLRR
Trigger: CCTCCTGAGAGAGTTCTTTCACCCCCTCTTCTTTCT...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTTCCTCTGTTCCATCTTaGCGCTCCTCAACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFSSVPS*RSSTGG
Trigger: TCCACCAGTTGAGGAGCGTCAAGATGGAACAGAGGA...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTATATTTAGCAACTGCTTaGACTTGTGTACGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELYLATA*TCVRGR
Trigger: CCGACCCCGTACACAAGTTCAAGCAGTTGCTAAATA...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATTCCGTTCCCTGGTCTaGATGTTTCTTGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSFRSLV*MFLDGK
Trigger: TTTGCCATCAAGAAACATTCAGACCAGGGAACGGAA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAGATCCACATCTTCAGTaGAACTCAGAATGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELDPHLQ*NSECGQ
Trigger: CTGGCCACATTCTGAGTTTCACTGAAGATGTGGATC...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAACCTGCTTATCCCTCCTaGATGCCAACAATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQPAYPS*MPTILA
Trigger: AGCCAAAATTGTTGGCATTCAGGAGGGATAAGCAGG...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAACCATTCTTGGGACATaGAACAAGGAGGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQTILGT*NKEEGK
Trigger: TTTCCCCTCCTCCTTGTTTCATGTCCCAAGAATGGT...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGGAGTGGGCAGATCTTaGTCAGTACAGTATTGGAGT +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHGVGRS*SVQYWS
Trigger: ACTCCAATACTGTACTGATCAAGATCTGCCCACTCC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACCTTTTTGGTAACTACTaGCTGCATTCAAACGTAACA +
Preference number: 4 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYLFGNY*LHSNVT
Trigger: TGTTACGTTTGAATGCAGTCAGTAGTTACCAAAAAG...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTTCAGTTGTGGTACTGTaGTGGGAGCAACACCGTTTG +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFSVVVL*WEQHRL
Trigger: CAAACGGTGTTGCTCCCATCACAGTACCACAACTGA...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAAGCTGTCTAAGGTACTaGAATCAAACCCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSSCLRY*NQTLQS
Trigger: ACTCTGCAGGGTTTGATTTCAGTACCTTAGACAGCT...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCATTCCTTGTCCTTCTTaGGTGAAGCTGGACGTTGGC +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFIPCPS*VKLDVG
Trigger: GCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAAT...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTGGCCTAACATATAACTaGGGAGTAATACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNAGLTYN*GVIQAL
Trigger: CAGTGCCTGTATTACTCCTCAGTTATATGTTAGGCC...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGCTGCCACTCAAGAATaGATTGTATTGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFAATQE*IVLGRE
Trigger: CTCCCTGCCCAATACAATGCATTCTTGAGTGGCAGC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGCCCGAGTCATGGAAGTaGCCAGAAGTGTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVPESWK*PEVSIL
Trigger: CAAGATGGACACTTCTGGGCACTTCCATGACTCGGG...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGACTTATCCCTCCTGAATaGCAACAATTTTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGLIPPE*QQFWLG
Trigger: GCCAAGCCAAAATTGTTGGCATTCAGGAGGGATAAG...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAATCCATGCCAAGCCACTaGCTTCAGAATGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQSMPSH*LQNGDD
Trigger: ATCATCACCATTCTGAAGGCAGTGGCTTGGCATGGA...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGAAGGGTTGATTGTACTTaGAGGAGAACGGGTAACTTT +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRRVDCT*RRTGNF
Trigger: AAAGTTACCCGTTCTCCTGCAAGTACAATCAACCCT...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCAAGGGTTGATTGTACTTaGAGGAGAACGGGTAACTTT +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSRVDCT*RRTGNF
Trigger: AAAGTTACCCGTTCTCCTGCAAGTACAATCAACCCT...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGATTAGAAAAGCACATCTaGACACTGGACTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGLEKHI*TLDSCW
Trigger: CCAACAAGAGTCCAGTGTGCAGATGTGCTTTTCTAA...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCACGATGCAACCTGGTTTaGACCTGTACAATATTGCAC +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSRCNLV*TCTILH
Trigger: GTGCAATATTGTACAGGTGCAAACCAGGTTGCATCG...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCACCTGATAAAAACAAGTaGCCTGGAGTTCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSPDKNK*PGVQMA
Trigger: AGCCATCTGAACTCCAGGGCACTTGTTTTTATCAGG...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTTACTGTCAAGAGGTCTaGTTTCCCCAAATGATGAAT +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFYCQEV*FPQMMN
Trigger: ATTCATCATTTGGGGAAAGCAGACCTCTTGACAGTA...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATATCAATATTTCTGGTaGATACAGGTCACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRYQYFW*IQVTWG
Trigger: TCCCCAGGTGACCTGTATGCACCAGAAATATTGATA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGATTACTAGTTACGTCCTaGTGGTCATGGTACCAAGCA +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGLLVTS*WSWYQA
Trigger: TGCTTGGTACCATGACCAGCAGGACGTAACTAGTAA...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTAAGAATGCATTGTATTaGGCAGGGAGGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPKNALY*AGRESR
Trigger: CCTGCTCTCCCTCCCTGCCCAATACAATGCATTCTT...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACAGGAAGGGTGGAGGATaGCGGTGGAGTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDRKGGG*RWSWTK
Trigger: CTTCGTCCAACTCCACCGCCATCCTCCACCCTTCCT...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAAGGAAGGGTGGAGGATaGCGGTGGAGTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKRKGGG*RWSWTK
Trigger: CTTCGTCCAACTCCACCGCCATCCTCCACCCTTCCT...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAGGGCCAACGAAAACATaGAGTCCTTTGAGTACAAAC +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGGPTKT*SPLSTN
Trigger: GTTTGTACTCAAAGGACTCCATGTTTTCGTTGGCCC...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGCAGGAATGGGGTGGATaGCGCACACCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTQEWGG*RTPASP
Trigger: TGGAGATGCTGGTGTGCGCCATCCACCCCATTCCTG...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTACTAGTTACGTCCTGCTaGTCATGGTACCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELLVTSC*SWYLSQ
Trigger: CTGTGAAAGGTACCATGACCAGCAGGACGTAACTAG...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000361147.8
CDS-3UTR CCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTTTGACGCTCCTCAACTaGTGGATAGCTTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFLTLLN*WIAWRN
Trigger: GTTCCTCCAAGCTATCCACCAGTTGAGGAGCGTCAA...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGACAGAGATTAGATTTCTaGTTTCAAGGCATGTCGGAC +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGQRLDF*FQGMSD
Trigger: GTCCGACATGCCTTGAAACCAGAAATCTAATCTCTG...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAAGCGGACCCCTCTTCTaGACTGGCTTCGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYISGPLF*TGFAVG
Trigger: GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAGTTCAAAGACCCCCATaGCGAAGAGCCCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKVQRPP*RRAHPP
Trigger: TGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAAC...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTGTTTTGGCAAGTTGTaGGCAGCTCTCTTTTACTTT +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHICFGKL*AALFYF
Trigger: AAAGTAAAAGAGAGCTGCCCACAACTTGCCAAAACA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCAATACACCTGGTCATGTaGACCATCGAAACACAACTT +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSIHLVM*TIETQL
Trigger: AAGTTGTGTTTCGATGGTCCACATGACCAGGTGTAT...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGATTACAGACATACACCTaGTCATGTGGACCATCGAAA +
Preference number: 4 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGLQTYT*SCGPSK
Trigger: TTTCGATGGTCCACATGACCAGGTGTATGTCTGTAA...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCATCTTCCTGAAAAAGTaGCCTTGGCTCTACAATTGT +
Preference number: 4 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIIFLKK*PWLYNC
Trigger: ACAATTGTAGAGCCAAGGCCACTTTTTCAGGAAGAT...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGGAGGAGGAAGGTTCTaGAACTACGTGCTAATCCCA +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFGGGRF*NYVLIP
Trigger: TGGGATTAGCACGTAGTTCCAGAACCTTCCTCCTCC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTTTCCTCCACCAGCTTaGTTGGTCACGATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPFPPPA*LVTMCL
Trigger: GAGACACATCGTGACCAACCAAGCTGGTGGAGGAAA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGTGCATACAGGTCACCTaGGGATTTGTTAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMCIQVT*GFVKRP
Trigger: TGGCCTTTTAACAAATCCCCAGGTGACCTGTATGCA...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTTCCACAGAGAGATGCTaGACACGAGCAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFSTERC*TRAAQC
Trigger: GCACTGTGCTGCTCGTGTTCAGCATCTCTCTGTGGA...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTATTTAGCAACTGCTTaGACTTGTGTACGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPYLATA*TCVRGR
Trigger: CCGACCCCGTACACAAGTTCAAGCAGTTGCTAAATA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR TCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTGATCCACATCTTCAGTaGAACTCAGAATGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPDPHLQ*NSECGQ
Trigger: CTGGCCACATTCTGAGTTTCACTGAAGATGTGGATC...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCACAGATTATGGAGCAATaGAAACATTTTTCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSQIMEQ*KHFSAP
Trigger: CGGCGCAGAAAAATGTTTTCATTGCTCCATAATCTG...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTAGAGACATGATGTCATaGAGTTACGTATTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFRDMMS*SYVLGR
Trigger: TCTTCCTAATACGTAACTTCATGACATCATGTCTCT...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGACTACTGGTAGTGCAATaGCTTCACAGTATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGLLVVQ*LHSISV
Trigger: AACTGAGATACTGTGAAGTCATTGCACTACCAGTAG...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATAGCTGTCTAAGGTACTaGAATCAAACCCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHSCLRY*NQTLQS
Trigger: ACTCTGCAGGGTTTGATTTCAGTACCTTAGACAGCT...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTTTGAGATTCAAAAACTaGGACAACATGACACAGCTA +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFLRFKN*DNMTQL
Trigger: TAGCTGTGTCATGTTGTCTCAGTTTTTGAATCTCAA...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAGCTACACAAACAGACTaGAAACGGGCATTTAGACAT +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGATQTD*KRAFRH
Trigger: ATGTCTAAATGCCCGTTTTCAGTCTGTTTGTGTAGC...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCTTACTGGTGAGATGCTaGGTTCCTCAAGGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFLLVRC*VPQGKN
Trigger: GTTCTTCCCTTGAGGAACTCAGCATCTCACCAGTAA...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTCTGGAGTCCAGACGCTaGCACTCAAGAATGCATTGT +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFLESRR*HSRMHC
Trigger: ACAATGCATTCTTGAGTGGCAGCGTCTGGACTCCAG...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATTATTTTTAGAAGCCTaGTTATCCCTCCTGAATGCC +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRLFLEA*LSLLNA
Trigger: GGCATTCAGGAGGGATAAGCAGGCTTCTAAAAATAA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTGAAGAACAGGCCCAGTaGTACAGAATAAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNAEEQAQ*YRIKIS
Trigger: GGAGATTTTTATTCTGTAGCACTGGGCCTGTTCTTC...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTAAAATAGCTTGTACATaGTCAGCGCTTGGAATTTAC +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESKIACT*SALGIY
Trigger: GTAAATTCCAAGCGCTGAGCATGTACAAGCTATTTT...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGATCAAGCCCACCGACTaGAAGGGGAGAGAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTIKPTD*KGREGV
Trigger: AACCCCTTCTCTCCCCTTGCAGTCGGTGGGCTTGAT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAATTCACGTCTTTCCTTaGCCACCTTGGAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELIHVFP*PPWSVS
Trigger: AGAAACACTCCAAGGTGGGCAAGGAAAGACGTGAAT...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCCTAAGCTCCAGCCCCTaGAATTTCATTTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFLSSSP*NFICLS
Trigger: GGAAAGGCAAATGAAATTGCAGGGGCTGGAGCTTAG...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAAGAGTGGCCAAGCAAGTaGTCATTGAGATTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQEWPSK*SLRLSW
Trigger: CCAGCTCAATCTCAATGACCACTTGCTTGGCCACTC...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATCGAGTATATCTGTTTTaGCAAGTTGTGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHRVYLF*QVVGSS
Trigger: AGAGCTGCCCACAACTTGCCAAAACAGATATACTCG...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAACGAGTATATCTGTTTTaGCAAGTTGTGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQRVYLF*QVVGSS
Trigger: AGAGCTGCCCACAACTTGCCAAAACAGATATACTCG...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCTGCACTACTAACATCTaGGGCTGGAAACCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFCTTNI*GWKPVA
Trigger: AGCAACAGGTTTCCAGCCCCAGATGTTAGTAGTGCA...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATTTCTAGGATGCCAGTaGCTACTGCTACCAGAAATA +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSFLGCQ*LLLPEI
Trigger: TATTTCTGGTAGCAGTAGCCACTGGCATCCTAGAAA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCACAACACCGTTTGTCCTaGGATGAAACATTGATTCTT +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSQHRLS*DETLIL
Trigger: AAGAATCAATGTTTCATCCCAGGACAAACGGTGTTG...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTACTCCAGTTCACGTTTaGGTGTTTCCAGTAATGGCG +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFTPVHV*VFPVMA
Trigger: CGCCATTACTGGAAACACCCAAACGTGAACTGGAGT...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCCTCCACCAGCTTGGTTaGTCACGATGTGTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFLHQLG*SRCVSF
Trigger: AAAAGAGACACATCGTGACCAACCAAGCTGGTGGAG...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCAGTGAAGCTGGACGTTaGCTGCTTCGATCTGATTCA +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFSEAGR*LLRSDS
Trigger: TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTCAAAGGAAAACTGGTTaGCTAGGTTTGAGACTTATA +
Preference number: 4 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFQRKTG*LGLRLI
Trigger: TATAAGTCTCAAACCTAGCCAACCAGTTTTCCTTTG...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTACCGGTTTCACGTACATaGAGAAACTCAGAATGCCTA +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELPVSRT*RNSECL
Trigger: TAGGCATTCTGAGTTTCTCCATGTACGTGAAACCGG...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTTGCCCCGATGCAACCTaGTTTGCACCTGTACAATAT +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFCPDAT*FAPVQY
Trigger: ATATTGTACAGGTGCAAACCAGGTTGCATCGGGGCA...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTTAGCTATTGCCTTATaGGAACCACAGAAATGGATT +
Preference number: 4 (lower is better)
Translates to: LSVPWSECFLMAKRPGESLAIAL*EPQKWI
Trigger: AATCCATTTCTGTGGTTCCCATAAGGCAATAGCTAA...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCACTCCTCAGTTTTCTATaGCCCAATTTTCCCATTGGA +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSLLSFL*PNFPIG
Trigger: TCCAATGGGAAAATTGGGCCATAGAAAACTGAGGAG...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAACTAGTTACGTCCTGCTaGTCATGGTACCAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQLVTSC*SWYQAG
Trigger: TCCTGCTTGGTACCATGACCAGCAGGACGTAACTAG...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618040.4
3UTR CAA 72 bp TGGCTACTGCTACCAGAAATAACTCCAGTCACTCCCTaGACTAGTGTTGCTAGTTTGGTCTTTAGGGTTTAC +
Preference number: 4 (lower is better)
Translates to: WLLLPEITPVTP*TSVASLVFRVY
Trigger: GTAAACCCTAAAGACCAAACTAGCAACACTAGTCAAGGGAGTGACTGGAGTTATTTCTGGTAGCAGTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp ACACAGCTAGAGAATGTTGTTTATTCCTTGTCCTTCTaGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGAT +
Preference number: 4 (lower is better)
Translates to: TQLENVVYSLSF*SEAGRWLLRSD
Trigger: ATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATAAACAACATTCTCTAGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCAAACATGGAGTCCTTTaGGTACAAACCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFKHGVL*VQTPRE
Trigger: CTCTCTTGGGGTTTGTACTCAAAGGACTCCATGTTT...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTTTCCGTTCCCTGGTCTaGATGTTTCTTGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFFRSLV*MFLDGK
Trigger: TTTGCCATCAAGAAACATTCAGACCAGGGAACGGAA...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTCCTGCTTATCCCTCCTaGATGCCAACAATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFPAYPS*MPTILA
Trigger: AGCCAAAATTGTTGGCATTCAGGAGGGATAAGCAGG...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATATATATGTGGCCTTTaGTCCAAAGGTGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSYICGL*SKGEDF
Trigger: AAAGTCTTCACCTTTGGATCAAAGGCCACATATATA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGATTCTTGTTGGTGCAATaGGTAAGAGAATTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGFLLVQ*VRELAF
Trigger: GAAAGCCAATTCTCTTACTCATTGCACCAACAAGAA...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATAGTATAATGTGTCCTTaGGCTTTGAGCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHSIMCP*ALSTAM
Trigger: CATTGCTGTGCTCAAAGCTCAAGGACACATTATACT...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAACCCGAGTCATGGAAGTaGCCAGAAGTGTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKPESWK*PEVSIL
Trigger: CAAGATGGACACTTCTGGGCACTTCCATGACTCGGG...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGGATTTATTTAGCAACTaGTTGAACTTGTGTACGGGG +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMDLFSN*LNLCTG
Trigger: CCCCGTACACAAGTTCAAGCAGTTGCTAAATAAATC...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATCAGGACAAAGCAATGTaGATTATGTCTGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHQDKAM*IMSEGI
Trigger: GATCCCTTCAGACATAATGCACATTGCTTTGTCCTG...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAAAGGTGTTATTGGATTaGTCCTGTTTGTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: ATRRELICILRPMGNASGKVLLD*SCLCMS
Trigger: AGACATGCACAAACAGGAGCAATCCAATAACACCTT...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATATAAATCACAGTCTGTaGACACTTTTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHINHSL*TLLARK
Trigger: CTTCCTGGCCAAAAGTGTGCACAGACTGTGATTTAT...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAACGATCTTGGCTCACTaGAACCTCCACTTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYITILAH*NLHFRG
Trigger: ACCCCGGAAGTGGAGGTTGCAGTGAGCCAAGATCGT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTACTGTCAAGAGGTCTaGTTTCCCCAAATGATGAAT +
Preference number: 4 (lower is better)
Translates to: GKATRRELICILRPMGNAYCQEV*FPQMMN
Trigger: ATTCATCATTTGGGGAAAGCAGACCTCTTGACAGTA...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATTTCCTCACTTTGGCATaGTCAATCTTCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHFLTLA*SIFFSS
Trigger: GCTGCTAAAGAAGATTGACCATGCCAAAGTGAGGAA...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATTTACAGACATACACCTaGTCATGTGGACCATCGAAA +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHLQTYT*SCGPSK
Trigger: TTTCGATGGTCCACATGACCAGGTGTATGTCTGTAA...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGCACCAAGATTAACATaGCACAGTAGGAACAGGCTA +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFAPRLT*HSRNRL
Trigger: TAGCCTGTTCCTACTGTGCCATGTTAATCTTGGTGC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAATTTGGCCAGGAAGAGTaGCAGTGGAATCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQFGQEE*QWNLAC
Trigger: ACATGCAAGATTCCACTGCCACTCTTCCTGGCCAAA...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATACATGCTCAGCGCTTaGAATTTACTTTTGCGTACA +
Preference number: 4 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSYMLSA*NLLLRT
Trigger: TGTACGCAAAAGTAAATTCCAAGCGCTGAGCATGTA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGCTGTCACAGGGCACTTaGCACCTAGATTTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTLSQGT*HLDLEV
Trigger: GACCTCCAAATCTAGGTGCCAAGTGCCCTGTGACAG...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATATGTCAACATCTCTTTaGGATCCTAACTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHMSTSL*DPNCRL
Trigger: CAACCTGCAGTTAGGATCCCAAAGAGATGTTGACAT...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAATGTCAACATCTCTTTaGGATCCTAACTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELMSTSL*DPNCRL
Trigger: CAACCTGCAGTTAGGATCCCAAAGAGATGTTGACAT...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAACTAATACCCAGGCCTTaGAGAATTAGAATATGGCAG +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQLIPRP*RIRIWQ
Trigger: CTGCCATATTCTAATTCTCCAAGGCCTGGGTATTAG...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTGCATACAGGTCACCTaGGGATTTGTTAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPCIQVT*GFVKRP
Trigger: TGGCCTTTTAACAAATCCCCAGGTGACCTGTATGCA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp ACACCTGGTCATGTGGACCATCGAAACACAACTTGTTaGGATGGAAGAAGAAAACTCTGCAGATGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: TPGHVDHRNTTC*DGRRKLCRCCY
Trigger: ATAACAGCATCTGCAGAGTTTTCTTCTTCCATCCAAACAAGTTGTGTTTCGATGGTCCACATGACCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp TATAGCAGAATGAAAACGGTGGGTAGGAATCACCAGTaGAAGGCTGTAGGTTTAAATGATCAGGATTGGCAC +
Preference number: 4 (lower is better)
Translates to: YSRMKTVGRNHQ*KAVGLNDQDWH
Trigger: GTGCCAATCCTGATCATTTAAACCTACAGCCTTCAACTGGTGATTCCTACCCACCGTTTTCATTCTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTGGTCTGAATGTTTCTTaGTGGCAAAGCGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFGLNVS*WQSDQE
Trigger: CTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACC...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGCTCCAGTCACTCCCTTaGCTAGTGTTGCTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTLQSLP*LVLLVW
Trigger: CCAAACTAGCAACACTAGTCAAGGGAGTGACTGGAG...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGCACTTCTAGAGACATaGTGTCATGAAGTTACGTAT +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHALLET*CHEVTY
Trigger: ATACGTAACTTCATGACATCATGTCTCTAGAAGTGC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGCTTTTTGGTAACTACTaGCTGCATTCAAACGTAACA +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMLFGNY*LHSNVT
Trigger: TGTTACGTTTGAATGCAGTCAGTAGTTACCAAAAAG...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAAGCAACAACAGCAAGTaGGGGTCCCAGGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYISNNSK*GSQVRR
Trigger: TCTTCTCACCTGGGACCCTCACTTGCTGTTGTTGCT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGATCTGTAAATCTATGTaGATTTTCAGGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMICKSM*IFRAWE
Trigger: TTCCCAAGCCCTGAAAATTCACATAGATTTACAGAT...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAATTGCAGTGTCTCTTCTaGTTGACACTGTATACAGGG +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQLQCLF*LTLYTG
Trigger: CCCTGTATACAGTGTCAATCAGAAGAGACACTGCAA...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTATCAAATCAAGCAAGGTaGATATCCAGGACAAAGCAA +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELSNQAR*ISRTKQ
Trigger: TTGCTTTGTCCTGGATATGCACCTTGCTTGATTTGA...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGAATGAAAACATTTTTCTaGGCCGCTCATTACACTAAA +
Preference number: 4 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRMKTFF*AAHYTK
Trigger: TTTAGTGTAATGAGCGGCGCAGAAAAATGTTTTCAT...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAATGCCACAAGGAAACTaGATGGTTACTTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQMPQGN*MVTSSV
Trigger: AACAGATGAAGTAACCATGCAGTTTCCTTGTGGCAT...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAGACCCTTTTTCTGGGTaGCCGGCAATCACTAACAGT +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKDPFSG*PAITNS
Trigger: ACTGTTAGTGATTGCCGGGCACCCAGAAAAAGGGTC...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTACTCCCTCAAGGGTATTaGCAATTTAGAAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELLPQGY*QFRKAH
Trigger: ATGTGCTTTTCTAAATTGGCAATACCCTTGAGGGAG...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTAACATGTGGGAACCTTaGTCCCTCAAGGGTATTGCC +
Preference number: 4 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFNMWEP*SLKGIA
Trigger: GGCAATACCCTTGAGGGAGCAAGGTTCCCACATGTT...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAATCACTGGGACTCCTCTaGCTTCTAAGACACAGGTTC +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKSLGLL*LLRHRF
Trigger: GAACCTGTGTCTTAGAAGGCAGAGGAGTCCCAGTGA...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTTTCCTCACTTTGGCATaGTCAATCTTCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFFLTLA*SIFFSS
Trigger: GCTGCTAAAGAAGATTGACCATGCCAAAGTGAGGAA...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTACACAACTTGTTTGGATaGAAGAAGAAAACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELHNLFG*KKKTLQ
Trigger: CTGCAGAGTTTTCTTCTTCCATCCAAACAAGTTGTG...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAAAGATCAGCCCACCAGTaGTCTTCACTTTGTGAAATG +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQRSAHQ*SSLCEM
Trigger: CATTTCACAAAGTGAAGACCACTGGTGGGCTGATCT...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTATACATGCTCAGCGCTTaGAATTTACTTTTGCGTACA +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELYMLSA*NLLLRT
Trigger: TGTACGCAAAAGTAAATTCCAAGCGCTGAGCATGTA...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGGTGCTTATATGAATTaGCCAAAGATGTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFGAYMN*PKMWIQ
Trigger: CTGGATCCACATCTTTGGCCAATTCATATAAGCACC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCGGTGCTTATATGAATTaGCCAAAGATGTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFGAYMN*PKMWIQ
Trigger: CTGGATCCACATCTTTGGCCAATTCATATAAGCACC...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTGGAGGAGGAAGGTTCTaGAACTACGTGCTAATCCCA +
Preference number: 4 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFGGGRF*NYVLIP
Trigger: TGGGATTAGCACGTAGTTCCAGAACCTTCCTCCTCC...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp GGCCAGGAAGAGTGGCAGTGGAATCTTGCATGTCATTaGGTTGAAATTAAGACTAAATCTCTATATGTGCAC +
Preference number: 4 (lower is better)
Translates to: GQEEWQWNLACH*VEIKTKSLYVH
Trigger: GTGCACATATAGAGATTTAGTCTTAATTTCAACCAAATGACATGCAAGATTCCACTGCCACTCTTCCTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp TGCACACTTTTGGCCAGGAAGAGTGGCAGTGGAATCTaGCATGTCATTTGGTTGAAATTAAGACTAAATCTC +
Preference number: 4 (lower is better)
Translates to: CTLLARKSGSGI*HVIWLKLRLNL
Trigger: GAGATTTAGTCTTAATTTCAACCAAATGACATGCAAGATTCCACTGCCACTCTTCCTGGCCAAAAGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp ACAATGGTTTTGTTCAGAGGGAACTCCAGTTCACGTTaGGGTGTTTCCAGTAATGGCGTAAGACAAAAAGAT +
Preference number: 4 (lower is better)
Translates to: TMVLFRGNSSSR*GVSSNGVRQKD
Trigger: ATCTTTTTGTCTTACGCCATTACTGGAAACACCCAAACGTGAACTGGAGTTCCCTCTGAACAAAACCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAGCTAACTACCTGAACTaGAAGCACCCCATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKANYLN*KHPMFR
Trigger: TCTGAACATGGGGTGCTTTCAGTTCAGGTAGTTAGC...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGAATGTGCATTATGTCTaGAGGGATCCACATCTTCAG +
Preference number: 4 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVNVHYV*RDPHLQ
Trigger: CTGAAGATGTGGATCCCTTCAGACATAATGCACATT...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAACAGATTATGGAGCAATaGAAACATTTTTCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQQIMEQ*KHFSAP
Trigger: CGGCGCAGAAAAATGTTTTCATTGCTCCATAATCTG...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGACCATTCTTGGGACATaGAACAAGGAGGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTTILGT*NKEEGK
Trigger: TTTCCCCTCCTCCTTGTTTCATGTCCCAAGAATGGT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTATTGAGATTCAAAAACTaGGACAACATGACACAGCTA +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELLRFKN*DNMTQL
Trigger: TAGCTGTGTCATGTTGTCTCAGTTTTTGAATCTCAA...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAACAGGACAAAGCAATGTaGATTATGTCTGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQQDKAM*IMSEGI
Trigger: GATCCCTTCAGACATAATGCACATTGCTTTGTCCTG...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTCAAATCAAGCAAGGTaGATATCCAGGACAAAGCAA +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPSNQAR*ISRTKQ
Trigger: TTGCTTTGTCCTGGATATGCACCTTGCTTGATTTGA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAAACATGTGGGAACCTTaGTCCCTCAAGGGTATTGCC +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYINMWEP*SLKGIA
Trigger: GGCAATACCCTTGAGGGAGCAAGGTTCCCACATGTT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTGCACCTGTACAATATTaGACCAAAGCAACAACAGCA +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFAPVQY*TKATTA
Trigger: TGCTGTTGTTGCTTTGGTGCAATATTGTACAGGTGC...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTTGCACTACTAACATCTaGGGCTGGAAACCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFCTTNI*GWKPVA
Trigger: AGCAACAGGTTTCCAGCCCCAGATGTTAGTAGTGCA...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCATCTTCCTGAAAAAGTaGCCTTGGCTCTACAATTGT +
Preference number: 4 (lower is better)
Translates to: LTNPMVASSRTEACKFSFIFLKK*PWLYNC
Trigger: ACAATTGTAGAGCCAAGGCCACTTTTTCAGGAAGAT...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAATTAAATGATCAGGATTaGCACACTCAGATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQLNDQD*HTQISP
Trigger: TGGGCTGATCTGAGTGTGCCAATCCTGATCATTTAA...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGTTTCTAGGATGCCAGTaGCTACTGCTACCAGAAATA +
Preference number: 4 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVFLGCQ*LLLPEI
Trigger: TATTTCTGGTAGCAGTAGCCACTGGCATCCTAGAAA...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTAGTGAGCCCCTAGTCTaGTGTAATTTACCAACTAAT +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPSEPLV*CNLPTN
Trigger: ATTAGTTGGTAAATTACACCAGACTAGGGGCTCACT...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAACTCCACCAGCTTGGTTaGTCACGATGTGTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKLHQLG*SRCVSF
Trigger: AAAAGAGACACATCGTGACCAACCAAGCTGGTGGAG...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGTACATATCGAGTTATaGCGCCAATATCAGAATTCA +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHVHIEL*RQYQNS
Trigger: TGAATTCTGATATTGGCGCCATAACTCGATATGTAC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAACATAACTGTTTCTaGGTACATATCGAGTTATGG +
Preference number: 4 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHEHNCF*VHIELW
Trigger: CCATAACTCGATATGTACCCAGAAACAGTTATGTTC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAACTCCTCAGTTTTCTATaGCCCAATTTTCCCATTGGA +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQLLSFL*PNFPIG
Trigger: TCCAATGGGAAAATTGGGCCATAGAAAACTGAGGAG...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTAGAGACATGATGTCATaGAGTTACGTATTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFRDMMS*SYVLGR
Trigger: TCTTCCTAATACGTAACTTCATGACATCATGTCTCT...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGAGCTACTAAAGGAGTaGTGGCTTTTAAAATCTCTT +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFELLKE*WLLKSL
Trigger: AAGAGATTTTAAAAGCCATCACTCCTTTAGTAGCTC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTAGGAGAGAGTTGATTTaGATCTTAAGACCTATGGGT +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFRRELI*ILRPMG
Trigger: ACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCT...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR GCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAAGCGGCATCTCTGGTATaGAAAACAACTAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQAASLV*KTTNES
Trigger: ACTTTCATTAGTTGTTTTGCATACCAGAGATGCCGC...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATACATGTGTTTCTAGGATaGCAGTGGCTACTGCTACCA +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIHVFLG*QWLLLP
Trigger: TGGTAGCAGTAGCCACTGGCATCCTAGAAACACATG...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTAAAATAGCTTGTACATaGTCAGCGCTTGGAATTTAC +
Preference number: 4 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFKIACT*SALGIY
Trigger: GTAAATTCCAAGCGCTGAGCATGTACAAGCTATTTT...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTACAAATTTTTAGCTATTaGCTTATGGGAACCACAGAA +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELQIFSY*LMGTTE
Trigger: TTCTGTGGTTCCCATAAGGCAATAGCTAAAAATTTG...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACCAGGTGCGGCATCTCTaGTATGCAAAACAACTAATG +
Preference number: 4 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDQVRHL*YAKQLM
Trigger: CATTAGTTGTTTTGCATACCAGAGATGCCGCACCTG...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAATACGTATTAGGAAGATaGCAAGAGCAGTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQYVLGR*QEQFID
Trigger: GTCTATGAACTGCTCTTGCCATCTTCCTAATACGTA...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGTACGTATTAGGAAGATaGCAAGAGCAGTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVYVLGR*QEQFID
Trigger: GTCTATGAACTGCTCTTGCCATCTTCCTAATACGTA...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTCAACACCGTTTGTCCTaGGATGAAACATTGATTCTT +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFQHRLS*DETLIL
Trigger: AAGAATCAATGTTTCATCCCAGGACAAACGGTGTTG...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTACAGTATCTCAGTTGTaGTACTGTGATGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFTVSQL*YCDGSN
Trigger: GTTGCTCCCATCACAGTACCACAACTGAGATACTGT...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACACACTGGACTCTTGTTaGGCCTTGTGTAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDTLDSC*ALCSLE
Trigger: TTCCAAACTACACAAGGCCCAACAAGAGTCCAGTGT...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTTCCTTGATTCTAGATaGAATACAACTTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPFLDSR*NTTLRG
Trigger: TCCCCTCAAAGTTGTATTCCATCTAGAATCAAGGAA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAGCCCAATTTTCCCATTaGAATAATGGGAATAATATG +
Preference number: 4 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELAQFSH*NNGNNM
Trigger: CATATTATTCCCATTATTCCAATGGGAAAATTGGGC...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp ATTTGGAGGTCATATGTTGAAGATTTGACAATGGTTTaGTTCAGAGGGAACTCCAGTTCACGTTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: IWRSYVEDLTMV*FRGNSSSRLGV
Trigger: AACACCCAAACGTGAACTGGAGTTCCCTCTGAACAAAACCATTGTCAAATCTTCAACATATGACCTCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp AGAGATTTAGTTGGTTTAAAGAAGTATAATGTGTCCTaGAGCTTTGAGCACAGCAATGGAAACCTGGCGACT +
Preference number: 4 (lower is better)
Translates to: RDLVGLKKYNVS*SFEHSNGNLAT
Trigger: AGTCGCCAGGTTTCCATTGCTGTGCTCAAAGCTCAAGGACACATTATACTTCTTTAAACCAACTAAATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAACCAAAGACCTCAGAATaGGAAAGTCATGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKPKTSE*ESHGFH
Trigger: GTGAAAACCATGACTTTCTCATTCTGAGGTCTTTGG...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGCCAAAGACCTCAGAATaGGAAAGTCATGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTPKTSE*ESHGFH
Trigger: GTGAAAACCATGACTTTCTCATTCTGAGGTCTTTGG...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGTATATATGTGGCCTTTaGTCCAAAGGTGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVYICGL*SKGEDF
Trigger: AAAGTCTTCACCTTTGGATCAAAGGCCACATATATA...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACGTCTGGGACCAAAATTaGGTTGTTGCGCCATTAAAA +
Preference number: 4 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDVWDQN*VVAPLK
Trigger: TTTTAATGGCGCAACAACTCAATTTTGGTCCCAGAC...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAATGTTTCCTCTTTGGTaGCCTGAGAAAGTTTACCGT +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKMFPLW*PEKVYR
Trigger: ACGGTAAACTTTCTCAGGTCACCAAAGAGGAAACAT...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAAGTGTCTCTTCTGATTaGCACTGTATACAGGGCATG +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYISVSSD*HCIQGM
Trigger: CATGCCCTGTATACAGTGTCAATCAGAAGAGACACT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGTTACTAGTTACGTCCTaGTGGTCATGGTACCTTTCA +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTLLVTS*WSWYLS
Trigger: TGAAAGGTACCATGACCAGCAGGACGTAACTAGTAA...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271915.9
CDS-3UTR GCA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGAAAACATTTTTCTaGGCCGCTCATTACACTAAA +
Preference number: 4 (lower is better)
Translates to: MFLDGKATRRELICILRPMKTFF*AAHYTK
Trigger: TTTAGTGTAATGAGCGGCGCAGAAAAATGTTTTCAT...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATATACTGTTTGTTGAGTTaGACTCTGGAGGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIYCLLS*TLEEEE
Trigger: TTCCTCCTCCTCCAGAGTGCAACTCAACAAACAGTA...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAGCAGACAGTTACTATTaGGATCCCTGTAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKADSYY*DPCKLL
Trigger: AAGGAGTTTACAGGGATCGCAATAGTAACTGTCTGC...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAAAGCTGGACGTTGGCTaGTTCGATCTGATTCAGATA +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIKLDVG*FDLIQI
Trigger: TATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGGCACCTGTACAATATTaGACCAAAGCAACAACAGCA +
Preference number: 4 (lower is better)
Translates to: GCRFHELLNFAIKDNISTAPVQY*TKATTA
Trigger: TGCTGTTGTTGCTTTGGTGCAATATTGTACAGGTGC...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAATACACCTGGTCATGTaGACCATCGAAACACAACTT +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKIHLVM*TIETQL
Trigger: AAGTTGTGTTTCGATGGTCCACATGACCAGGTGTAT...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTCTGGAAACCTGTTGCTaGATAAATACAGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFLETCC*INTAQQ
Trigger: TTGCTGAGCTGTATTTATCCAGCAACAGGTTTCCAG...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAACTGGAAACCTGTTGCTaGATAAATACAGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKLETCC*INTAQQ
Trigger: TTGCTGAGCTGTATTTATCCAGCAACAGGTTTCCAG...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAAGATCAGCCCACCAGTaGTCTTCACTTTGTGAAATG +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIRSAHQ*SSLCEM
Trigger: CATTTCACAAAGTGAAGACCACTGGTGGGCTGATCT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTGTACATATCGAGTTATaGCGCCAATATCAGAATTCA +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFVHIEL*RQYQNS
Trigger: TGAATTCTGATATTGGCGCCATAACTCGATATGTAC...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACGATGGAATACAACTTTaGGGGGAAAGGTCAGAATAT +
Preference number: 4 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDDGIQL*GERSEY
Trigger: ATATTCTGACCTTTCCCCTCAAAGTTGTATTCCATC...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR TCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAATGTTTCCTCTTTGGTaGCCTGAGAAAGTTTACCGT +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIMFPLW*PEKVYR
Trigger: ACGGTAAACTTTCTCAGGTCACCAAAGAGGAAACAT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAAAGGTGTTATTGGATTaGTCCTGTTTGTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKKVLLD*SCLCMS
Trigger: AGACATGCACAAACAGGAGCAATCCAATAACACCTT...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTATGCCACAAGGAAACTaGATGGTTACTTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFMPQGN*MVTSSV
Trigger: AACAGATGAAGTAACCATGCAGTTTCCTTGTGGCAT...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAGCAGACAGTTACTATTaGGATCCCTGTAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIADSYY*DPCKLL
Trigger: AAGGAGTTTACAGGGATCGCAATAGTAACTGTCTGC...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATATTAGAAAAGCACATCTaGACACTGGACTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYILEKHI*TLDSCW
Trigger: CCAACAAGAGTCCAGTGTGCAGATGTGCTTTTCTAA...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACCTCCCTCAAGGGTATTaGCAATTTAGAAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDLPQGY*QFRKAH
Trigger: ATGTGCTTTTCTAAATTGGCAATACCCTTGAGGGAG...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAGCTTATCAATATTTCTaGTGCATACAGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIAYQYF*CIQVTW
Trigger: CCAGGTGACCTGTATGCACCAGAAATATTGATAAGC...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTGCCCAATTTTCCCATTaGAATAATGGGAATAATATG +
Preference number: 4 (lower is better)
Translates to: FQSDSSISVLASCGQLSFAQFSH*NNGNNM
Trigger: CATATTATTCCCATTATTCCAATGGGAAAATTGGGC...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAATCTTACAAATCCAATaGTGGCCAGCAGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIILQIQ*WPAVEL
Trigger: CAGTTCTACTGCTGGCCACCATTGGATTTGTAAGAT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAAGGAGAGAGTTGATTTaGATCTTAAGACCTATGGGT +
Preference number: 4 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIRRELI*ILRPMG
Trigger: ACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR GCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAATTATTAAACTGGCTTTaGAGAGCTACTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKLLNWL*RATKGV
Trigger: CACTCCTTTAGTAGCTCTGCAAAGCCAGTTTAATAA...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAAGAATGCCAACAATTTTaGCTTGGCATCCATTTCAAA +
Preference number: 4 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKECQQF*LGIHFK
Trigger: TTTGAAATGGATGCCAAGCCAAAATTGTTGGCATTC...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CCA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACGAACATAACTGTTTCTaGGTACATATCGAGTTATGG +
Preference number: 4 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDEHNCF*VHIELW
Trigger: CCATAACTCGATATGTACCCAGAAACAGTTATGTTC...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp AATAGCTTGTACATGCTCAGCGCTTGGAATTTACTTTaGCGTACATTTTCTATGTCTCCTAATTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: NSLYMLSAWNLL*RTFSMSPNSQD
Trigger: ATCTTGTGAATTAGGAGACATAGAAAATGTACGCAAAAGTAAATTCCAAGCGCTGAGCATGTACAAGCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
3UTR CAA 72 bp GTAGAATTATTCCTCTACTCTTGGAATAATGTTCTTTaGTCTCTAATACCCAGGCCTTGGAGAATTAGAATA +
Preference number: 4 (lower is better)
Translates to: VELFLYSWNNVL*SLIPRPWRIRI
Trigger: TATTCTAATTCTCCAAGGCCTGGGTATTAGAGACAAAAGAACATTATTCCAAGAGTAGAGGAATAATTCTAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 90 bp GCCACGCTGACACCCCGGGCCTCGATGATGGCAGACAGGAGCTGCTaGTGCTGCTGGCGCAGGGTGTCGGCGATGAGCAGCGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ATLTPRASMMADRSC*CCWRRVSAMSSGRE
Trigger: CTCCCTGCCGCTGCTCATCGCCGACACCCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGCCATCATCGAGGCCCGGGGTGTCAGCGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000515643.1
ENST00000618040.4
CDS GCA 90 bp GGGGCTGCTGGTGGCGCTGGCGGTGGTGGCTGCTGCTGCTGTTGCTaGTGCTGCTGCTGCTGCTGCTCATCCCCAGAGGATGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: GAAGGAGGGGCCCCC*CCCCCCSSPEDGQG
Trigger: CCCCTGTCCATCCTCTGGGGATGAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCACCACCGCCAGCGCCACCAGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 90 bp AAGGGGTTGCTGTCCCGCCGGTGCACCAGGGGGCTGGCCTGTCGGTaGCGGCTGCCTCCGCCAGGCCCACTTGTAGCTGTGGAACTTGGA +
Preference number: 5 (lower is better)
Translates to: KGLLSRRCTRGLACR*RLPPPGPLVAVELG
Trigger: TCCAAGTTCCACAGCTACAAGTGGGCCTGGCGGAGGCAGCCGGCACCGACAGGCCAGCCCCCTGGTGCACCGGCGGGACAGCAACCCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 90 bp ACTGCCACGCTGACACCCCGGGCCTCGATGATGGCAGACAGGAGCTaGTGCTGCTGCTGGCGCAGGGTGTCGGCGATGAGCAGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: TATLTPRASMMADRS*CCCWRRVSAMSSGR
Trigger: CCTGCCGCTGCTCATCGCCGACACCCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGCCATCATCGAGGCCCGGGGTGTCAGCGTGGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000515643.1
ENST00000618040.4
CDS GCA 90 bp ACGCTGACACCCCGGGCCTCGATGATGGCAGACAGGAGCTGCTGCTaGTGCTGGCGCAGGGTGTCGGCGATGAGCAGCGGCAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: TLTPRASMMADRSCC*CWRRVSAMSSGREL
Trigger: CAACTCCCTGCCGCTGCTCATCGCCGACACCCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGCCATCATCGAGGCCCGGGGTGTCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000515643.1
ENST00000618040.4
CDS CCA 90 bp GACGGGCTGGCTCTGGAGTTGGGCGAGCTGAGACAGGGGATGCGGTaGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DGLALELGELRQGMR*LLLLLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACCGCATCCCCTGTCTCAGCTCGCCCAACTCCAGAGCCAGCCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 90 bp CTGACACCCCGGGCCTCGATGATGGCAGACAGGAGCTGCTGCTGCTaGTGGCGCAGGGTGTCGGCGATGAGCAGCGGCAGGGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LTPRASMMADRSCCC*WRRVSAMSSGRELK
Trigger: CTTCAACTCCCTGCCGCTGCTCATCGCCGACACCCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGCCATCATCGAGGCCCGGGGTGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000515643.1
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGGGCTGGCTCTGGAGTaGGGCGAGCTGAGACAGGGG +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQGLALE*GELRQG
Trigger: CCCCTGTCTCAGCTCGCCCAACTCCAGAGCCAGCCC...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAATGGGGCTATCGGAGATaGGGGTGTGGGTGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQWGYRR*GCGWCP
Trigger: TGGGCACCACCCACACCCCAATCTCCGATAGCCCCA...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCGAAAAGCTGGAGGGGTaGGCCCTCAGTCTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSEKLEG*ALSLGL
Trigger: GAGGCCGAGACTGAGGGCCAACCCCTCCAGCTTTTC...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAACAGTCATCCGCGCCATaGTCGATCACGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQQSSAP*SITKSW
Trigger: CCAGCTCTTCGTGATCGACAATGGCGCGGATGACTG...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS CCA 90 bp GCCAGGCGTGCCGTCCAGAAGAACTTGTACTCGCCAGGAATGGGGTaGATGGCGCACACCAGCATCTCCAGGCTGATGTACAGGATGCGC +
Preference number: 5 (lower is better)
Translates to: ARRAVQKNLYSPGMG*MAHTSISRLMYRMR
Trigger: GCGCATCCTGTACATCAGCCTGGAGATGCTGGTGTGCGCCATCCACCCCATTCCTGGCGAGTACAAGTTCTTCTGGACGGCACGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGTCTGGTGGGCATGGTaGTCCTCCCGGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTVWWAW*SSREEM
Trigger: CATCTCCTCCCGGGAGGACAACCATGCCCACCAGAC...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAACACCAGAGTGTTGGCTaGGTCACTCAGCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQHQSVG*VTQLPL
Trigger: CAGAGGAAGCTGAGTGACCAAGCCAACACTCTGGTG...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS GCA 90 bp CCAATCTCCCCCACCAGTATCTTGGCTCCAGTCCTCTCTTTGGCTTaGTTCGGTTCTCTGGGGCTGCCTGGAGTCCAGACGCTGCCACTC +
Preference number: 5 (lower is better)
Translates to: PISPTSILAPVLSLA*FGSLGLPGVQTLPL
Trigger: GAGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 90 bp GGAGAGTGGCCAAGCAAGTGGTCATTGAGATTGAGCTGGCTGCCTTaGCTGGAGGAAGGGTGGAGGATGGCGGTGGAGTTGGACGAAGGG +
Preference number: 5 (lower is better)
Translates to: GEWPSKWSLRLSWLP*LEEGWRMAVELDEG
Trigger: CCCTTCGTCCAACTCCACCGCCATCCTCCACCCTTCCTCCAGGCAAGGCAGCCAGCTCAATCTCAATGACCACTTGCTTGGCCACTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 90 bp GGCATCCAATCTCCCCCACCAGTATCTTGGCTCCAGTCCTCTCTTTaGCTTGCTTCGGTTCTCTGGGGCTGCCTGGAGTCCAGACGCTGC +
Preference number: 5 (lower is better)
Translates to: GIQSPPPVSWLQSSL*LASVLWGCLESRRC
Trigger: GCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGATTGGATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTTCCCCCACCAGTATCTaGGCTCCAGTCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFASPTSI*APVLSL
Trigger: CAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGA...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAACCAAGCAAGTGGTCATaGAGATTGAGCTGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQPSKWS*RLSWLP
Trigger: AGGCAGCCAGCTCAATCTCAATGACCACTTGCTTGG...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCCCTGTCATTCTCTTGTaGTTCTCGTGGCCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGPVILL*FSWPVQ
Trigger: CTGCACTGGCCACGAGAACAACAAGAGAATGACAGG...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGGGGCTGGCTCTGGAGTaGGGCGAGCTGAGACAGGGG +
Preference number: 5 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEGLALE*GELRQG
Trigger: CCCCTGTCTCAGCTCGCCCAACTCCAGAGCCAGCCC...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTCCAAGCAAGTGGTCATaGAGATTGAGCTGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAPSKWS*RLSWLP
Trigger: AGGCAGCCAGCTCAATCTCAATGACCACTTGCTTGG...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACACAGTCATCCGCGCCATaGTCGATCACGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTQSSAP*SITKSW
Trigger: CCAGCTCTTCGTGATCGACAATGGCGCGGATGACTG...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAGTCATCCGCGCCATaGTCGATCACGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTQSSAP*SITKSW
Trigger: CCAGCTCTTCGTGATCGACAATGGCGCGGATGACTG...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACAGCCGTCCAGAAGAACTaGTACTCGCCAGGAATGGGG +
Preference number: 5 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTAVQKN*YSPGMG
Trigger: CCCCATTCCTGGCGAGTACAAGTTCTTCTGGACGGC...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTATTCCTCTGTTCCATCTaGACGCTCCTCAACTGGTGG +
Preference number: 5 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLFLCSI*TLLNWW
Trigger: CCACCAGTTGAGGAGCGTCAAGATGGAACAGAGGAA...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCACCAGAGTGTTGGCTaGGTCACTCAGCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLHQSVG*VTQLPL
Trigger: CAGAGGAAGCTGAGTGACCAAGCCAACACTCTGGTG...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACCTCCACCAGCTTGGTaGGTCACGATGTGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLPPPAW*VTMCLF
Trigger: AAAGAGACACATCGTGACCAACCAAGCTGGTGGAGG...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCACCAAACAACTGTCCTaGCAGATGTCGCGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSTKQLS*QMSRGR
Trigger: CCTGCCACGCGACATCTGCAAGGACAGTTGTTTGGT...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS GCA 90 bp CTTTGGCTTGCTTCGGTTCTCTGGGGCTGCCTGGAGTCCAGACGCTaGCACTCAAGAATGCATTGTATTGGGCAGGGAGGGAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LWLASVLWGCLESRR*HSRMHCIGQGGRAG
Trigger: TCCTGCTCTCCCTCCCTGCCCAATACAATGCATTCTTGAGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 90 bp CCAAGGAGAGGTGCTCCCCCAGCTGATTCCAAGGCGGCGCCCAGCTaGTCTGCCCAGGTAACACCTGTAGCCATTTTTATCAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: PRRGAPPADSKAAPS*SAQVTPVAIFIRRC
Trigger: ACATCTCCTGATAAAAATGGCTACAGGTGTTACCTGGGCAGAGCAGCTGGGCGCCGCCTTGGAATCAGCTGGGGGAGCACCTCTCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358505.2
CDS CCA 90 bp GGCTCCAGTCCTCTCTTTGGCTTGCTTCGGTTCTCTGGGGCTGCCTaGAGTCCAGACGCTGCCACTCAAGAATGCATTGTATTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GSSPLFGLLRFSGAA*SPDAATQECIVLGR
Trigger: CCTGCCCAATACAATGCATTCTTGAGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTGGTTTTTCCGCTTGTaGGCTTTGGGGAAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSWFFRL*ALGKVV
Trigger: CACCACCTTCCCCAAAGCCAACAAGCGGAAAAACCA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACAGCATCGGTGAAGAGCTaGCTGTGCAGCAGCATGACT +
Preference number: 5 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTASVKS*LCSSMT
Trigger: AGTCATGCTGCTGCACAGCAAGCTCTTCACCGATGC...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAAGGTCCACCAGAGTGTaGGCTTGGTCACTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTRSTRV*AWSLSF
Trigger: GAAGCTGAGTGACCAAGCCAACACTCTGGTGGACCT...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAATGACATTCTGCATCTaGGAAAGGTCCACCAGAGTG +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQMTFCI*ERSTRV
Trigger: CACTCTGGTGGACCTTTCCAAGATGCAGAATGTCAT...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAAGCAACTGCTTGAACTaGTGTACGGGGTCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTSNCLN*CTGSGR
Trigger: CCTTCCCGACCCCGTACACAAGTTCAAGCAGTTGCT...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCGCGACCAGGAGAGAGTaGATTTGCATCTTAAGACCT +
Preference number: 5 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGATRRE*ICILRP
Trigger: AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGGAGTGTACTGTTTGTaGAGTTGCACTCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFAGVYCL*SCTLEE
Trigger: CTCCTCCAGAGTGCAACTCAACAAACAGTACACTCC...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGATGGGAGCAACACCGTTaGTCCTGGGATGAAACATTG +
Preference number: 5 (lower is better)
Translates to: GPARGVASCHLLFPLPSRWEQHR*SWDETL
Trigger: CAATGTTTCATCCCAGGACAAACGGTGTTGCTCCCA...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGATTTTCCTCCACCAGCTaGGTTGGTCACGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: GPARGVASCHLLFPLPSRFSSTS*VGHDVS
Trigger: AGACACATCGTGACCAACCAAGCTGGTGGAGGAAAA...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 90 bp GTCCCAGCTTATAGCCAATGTTTTGGTTTTTCCGCTTGTTGGCTTTaGGGAAGGTGGTGCTGCTGGCGGTGGTGCCGGCATGCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: VPAYSQCFGFSACWL*GRWCCWRWCRHAGG
Trigger: ACCACCAGCATGCCGGCACCACCGCCAGCAGCACCACCTTCCCCAAAGCCAACAAGCGGAAAAACCAAAACATTGGCTATAAGCTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCGTTTCCCGAAGGACATaGGCTGCAGCATTCTTGATC +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSVSRRT*AAAFLI
Trigger: GATCAAGAATGCTGCAGCCAATGTCCTTCGGGAAAC...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAACTGGTGGATAGCTaGGAGGAACTTCCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTQLVDS*EELPLV
Trigger: CACCAGAGGAAGTTCCTCCAAGCTATCCACCAGTTG...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACATTCCTCTGTTCCATCTaGACGCTCCTCAACTGGTGG +
Preference number: 5 (lower is better)
Translates to: ERCVQRPPWRRAHPPSLTFLCSI*TLLNWW
Trigger: CCACCAGTTGAGGAGCGTCAAGATGGAACAGAGGAA...TGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGGTCCACCAGAGTGTaGGCTTGGTCACTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQRSTRV*AWSLSF
Trigger: GAAGCTGAGTGACCAAGCCAACACTCTGGTGGACCT...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAATCTTCGCTCCGGTCATaGAGTTCTGTGATTAAGTCA +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQSSLRS*SSVIKS
Trigger: TGACTTAATCACAGAACTCAATGACCGGAGCGAAGA...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAATTATTTAGCAACTGCTaGAACTTGTGTACGGGGTCG +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQLFSNC*NLCTGS
Trigger: CGACCCCGTACACAAGTTCAAGCAGTTGCTAAATAA...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCATCTGTTTTGGCAAGTaGTGGGCAGCTCTCTTTTAC +
Preference number: 5 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGICFGK*WAALFY
Trigger: GTAAAAGAGAGCTGCCCACAACTTGCCAAAACAGAT...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTACAGGAGCACCATTCTaGGGACATGAAACAAGGAGG +
Preference number: 5 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLTGAPF*GHETRR
Trigger: CCTCCTTGTTTCATGTCCCAAGAATGGTGCTCCTGT...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTGGGAGCAACACCGTTaGTCCTGGGATGAAACATTG +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSWEQHR*SWDETL
Trigger: CAATGTTTCATCCCAGGACAAACGGTGTTGCTCCCA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAAATTCACGTCTTTCCTaGCCCACCTTGGAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: GPARGVASCHLLFPLPSRNSRLS*PTLECF
Trigger: GAAACACTCCAAGGTGGGCAAGGAAAGACGTGAATT...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 90 bp TCTTGGCTCCAGTCCTCTCTTTGGCTTGCTTCGGTTCTCTGGGGCTaGCTGGAGTCCAGACGCTGCCACTCAAGAATGCATTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: SWLQSSLWLASVLWG*LESRRCHSRMHCIG
Trigger: CCCAATACAATGCATTCTTGAGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 90 bp CCAGTATCTTGGCTCCAGTCCTCTCTTTGGCTTGCTTCGGTTCTCTaGGGCTGCCTGGAGTCCAGACGCTGCCACTCAAGAATGCATTGT +
Preference number: 5 (lower is better)
Translates to: PVSWLQSSLWLASVL*GCLESRRCHSRMHC
Trigger: ACAATGCATTCTTGAGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 90 bp TGTCCTCAAAGAAAGCCAGGCATCCAATCTCCCCCACCAGTATCTTaGCTCCAGTCCTCTCTTTGGCTTGCTTCGGTTCTCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: CPQRKPGIQSPPPVS*LQSSLWLASVLWGC
Trigger: GCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGATTGGATGCCTGGCTTTCTTTGAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 90 bp GCAAAACACCAAACAACTGTCCTTGCAGATGTCGCGTGGCAGGCCTaGTATCAGCAAGCTCTAAGGAGTAGGTGCCAGCTCAGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: AKHQTTVLADVAWQA*YQQALRSRCQLSPC
Trigger: GCAGGGACTGAGCTGGCACCTACTCCTTAGAGCTTGCTGATACCAGGCCTGCCACGCGACATCTGCAAGGACAGTTGTTTGGTGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGTCTGGTGGGCATGGTaGTCCTCCCGGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIVWWAW*SSREEM
Trigger: CATCTCCTCCCGGGAGGACAACCATGCCCACCAGAC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CCAACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTATGACATTCTGCATCTaGGAAAGGTCCACCAGAGTG +
Preference number: 5 (lower is better)
Translates to: PTLQQGPCQRRRFLSSPLMTFCI*ERSTRV
Trigger: CACTCTGGTGGACCTTTCCAAGATGCAGAATGTCAT...AAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACAGGAGAGAGTTGATTaGCATCTTAAGACCTATGGG +
Preference number: 5 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLQERVD*HLKTYG
Trigger: CCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTG...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTGCGACCAGGAGAGAGTaGATTTGCATCTTAAGACCT +
Preference number: 5 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSATRRE*ICILRP
Trigger: AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAATTCACTAAGGTGTTATaGGATTGCTCCTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQFTKVL*DCSCLC
Trigger: GCACAAACAGGAGCAATCCAATAACACCTTAGTGAA...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGTCTGTGCACACTTTaGGCCAGGAAGAGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQSLCTL*ARKSGS
Trigger: ACTGCCACTCTTCCTGGCCAAAAGTGTGCACAGACT...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAATCCCTAATGTTTATTTaGGCGGCAGTAGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQSLMFI*AAVEKE
Trigger: TTCCTTCTCTACTGCCGCCAAAATAAACATTAGGGA...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCCACGATGTGTCTCTTTaGCTTGTTTCAACACATAGC +
Preference number: 5 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGHDVSL*LVSTHS
Trigger: GCTATGTGTTGAAACAAGCAAAAGAGACACATCGTG...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGATGCACCTGTACAATATaGCACCAAAGCAACAACAGC +
Preference number: 5 (lower is better)
Translates to: GPARGVASCHLLFPLPSRCTCTI*HQSNNS
Trigger: GCTGTTGTTGCTTTGGTGCAATATTGTACAGGTGCA...TCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGCCTGACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGACTCATACAGGCAGTaGTATAACTGTAGACAGGCA +
Preference number: 5 (lower is better)
Translates to: KPDTTLPPSGPLFWTGFADSYRQ*YNCRQA
Trigger: TGCCTGTCTACAGTTATACAACTGCCTGTATGAGTC...AGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTCAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAATCTAACCAGAGCAAGTaGGTTCATTACAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQSNQSK*VHYKLS
Trigger: TGACAGCTTGTAATGAACCAACTTGCTCTGGTTAGA...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 90 bp AAGCTGGCGGTGAGATGCTCCAGCTTCGACTCCAGGCTGCCAATCTaGTTCTCCAGGTCTTCGCTCCGGTCATTGAGTTCTGTGATTAAG +
Preference number: 5 (lower is better)
Translates to: KLAVRCSSFDSRLPI*FSRSSLRSLSSVIK
Trigger: CTTAATCACAGAACTCAATGACCGGAGCGAAGACCTGGAGAAGCAGATTGGCAGCCTGGAGTCGAAGCTGGAGCATCTCACCGCCAGCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCGCTCCAGTCCTCTCTTaGGCTTGCTTCGGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPAPVLS*ACFGSL
Trigger: CAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGC...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAAAAGCTGGAGGGGTaGGCCCTCAGTCTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGEKLEG*ALSLGL
Trigger: GAGGCCGAGACTGAGGGCCAACCCCTCCAGCTTTTC...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACGCCGTCCAGAAGAACTaGTACTCGCCAGGAATGGGG +
Preference number: 5 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYAVQKN*YSPGMG
Trigger: CCCCATTCCTGGCGAGTACAAGTTCTTCTGGACGGC...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAACTAGTGTTGCTAGTTaGGTCTTTAGGGTTTACCTA +
Preference number: 5 (lower is better)
Translates to: ARALPEASLPVISSSRSQTSVAS*VFRVYL
Trigger: TAGGTAAACCCTAAAGACCAAACTAGCAACACTAGT...TTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GACACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTGGAATAATGTTCTTTaGTCTCTAATACCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: DTTLPPSGPLFWTGFAVGWNNVL*SLIPRP
Trigger: AGGCCTGGGTATTAGAGACAAAAGAACATTATTCCA...GCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCGACTCATACAGGCAGTaGTATAACTGTAGACAGGCA +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSDSYRQ*YNCRQA
Trigger: TGCCTGTCTACAGTTATACAACTGCCTGTATGAGTC...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTCCAGAAGTGTCCATCTaGGGGCCTGGCTGTATTCCC +
Preference number: 5 (lower is better)
Translates to: LSVPWSECFLMAKRPGESPEVSI*GPGCIP
Trigger: GGGAATACAGCCAGGCCCCAAGATGGACACTTCTGG...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCGATGGACAGGGGCACTaGGGGTCTTCATCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIDGQGH*GSSSKS
Trigger: GGACTTGGATGAAGACCCCAAGTGCCCCTGTCCATC...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCTGGTGTTTCCTCACTTaGGCATGGTCAATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSWCFLT*AWSIFF
Trigger: AAAGAAGATTGACCATGCCAAAGTGAGGAAACACCA...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GCGTCGCTTCCTGTCATCTCCTCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGTGGTCTGAATGTTTCTaGATGGCAAAGCGACCAGGA +
Preference number: 5 (lower is better)
Translates to: ASLPVISSSRSQVEAPKQWSECF*MAKRPG
Trigger: TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCA...CTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACGTAGGGGATCTGCCATaGGGTCAGTCCTCTAGGAGT +
Preference number: 5 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYVGDLP*GQSSRS
Trigger: ACTCCTAGAGGACTGACCCAATGGCAGATCCCCTAC...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTAAAGTATAATGTGTCCTaGAGCTTTGAGCACAGCAAT +
Preference number: 5 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLKYNVS*SFEHSN
Trigger: ATTGCTGTGCTCAAAGCTCAAGGACACATTATACTT...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGAAGTGGTCATTGAGATaGAGCTGGCTGCCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEKWSLR*SWLPCL
Trigger: CAGGCAAGGCAGCCAGCTCAATCTCAATGACCACTT...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTATCTCCGTGAAGGGGTaGCTGTCCCGCCGGTGCACC +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFISVKG*LSRRCT
Trigger: GGTGCACCGGCGGGACAGCAACCCCTTCACGGAGAT...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAATGGGGCTATCGGAGATaGGGGTGTGGGTGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQWGYRR*GCGWCP
Trigger: TGGGCACCACCCACACCCCAATCTCCGATAGCCCCA...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCCCATCGAAACACAACTaGTTTGGATGGAAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSPSKHN*FGWKKK
Trigger: TTTCTTCTTCCATCCAAACAAGTTGTGTTTCGATGG...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTACTAGTGTTGCTAGTTaGGTCTTTAGGGTTTACCTA +
Preference number: 5 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSTSVAS*VFRVYL
Trigger: TAGGTAAACCCTAAAGACCAAACTAGCAACACTAGT...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTTTAAGTCATCAAGGGTaGATTGTACTTGCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSLSHQG*IVLAGE
Trigger: TTCTCCTGCAAGTACAATCAACCCTTGATGACTTAA...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCTGGGCTCCATGTCCTaGATAAACATGTGGGAACCT +
Preference number: 5 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPLGSMS*INMWEP
Trigger: AGGTTCCCACATGTTTATCAAGGACATGGAGCCCAG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCAGATGGAATACAACTTaGAGGGGAAAGGTCAGAATA +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSRWNTT*RGKVRI
Trigger: TATTCTGACCTTTCCCCTCAAAGTTGTATTCCATCT...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AACTCTGCAGCAAGGGCCCTGCCAGAGGCGTCGCTTCCTGTCATCTCCTCTTCCACTGACCTCTTTAGATaGAAGTCCAAGGCACTTTTT +
Preference number: 5 (lower is better)
Translates to: NSAARALPEASLPVISSSTDLFR*KSKALF
Trigger: AAAAAGTGCCTTGGACTTCAATCTAAAGAGGTCAGT...GGAAGAGGAGATGACAGGAAGCGACGCCTCTGGCAGGGCCCTTGCTGCAGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CACAACCCTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTATCACACTTCCATATTTaGCACAGAGAAGAAAATGCA +
Preference number: 5 (lower is better)
Translates to: HNPPSQRTPLLDWLRCWLSHFHI*HREENA
Trigger: TGCATTTTCTTCTCTGTGCAAAATATGGAAGTGTGA...TAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAGGGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATATTGAGCTGGCTGCCTaGCCTGGAGGAAGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHIELAA*PGGRVE
Trigger: CTCCACCCTTCCTCCAGGCAAGGCAGCCAGCTCAAT...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGATTCCGCTTGTTGGCTTaGGGGAAGGTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ATRRELICILRPMGNASGFRLLA*GKVVLL
Trigger: CAGCAGCACCACCTTCCCCAAAGCCAACAAGCGGAA...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCTTCCTCTGTTCCATCTaGACGCTCCTCAACTGGTGG +
Preference number: 5 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIFLCSI*TLLNWW
Trigger: CCACCAGTTGAGGAGCGTCAAGATGGAACAGAGGAA...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTGGGGCTATCGGAGATaGGGGTGTGGGTGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: MFLDGKATRRELICILRPWGYRR*GCGWCP
Trigger: TGGGCACCACCCACACCCCAATCTCCGATAGCCCCA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAAGCAACTGCTTGAACTaGTGTACGGGGTCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGSNCLN*CTGSGR
Trigger: CCTTCCCGACCCCGTACACAAGTTCAAGCAGTTGCT...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCGTGAAGACCTGAGATaGAGCGTGGATTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPREDLR*SVDFCS
Trigger: AGAACAGAAATCCACGCTCAATCTCAGGTCTTCACG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCAGTCTGGGCTGCTGTaGATGACAAAGGTGATTTCA +
Preference number: 5 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPQSGLL*MTKVIS
Trigger: TGAAATCACCTTTGTCATCAACAGCAGCCCAGACTG...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCTTCACAGTATCTCAGTaGTGGTACTGTGATGGGAGC +
Preference number: 5 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPFTVSQ*WYCDGS
Trigger: GCTCCCATCACAGTACCACAACTGAGATACTGTGAA...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGAGGGGAGAGAAGGGGTaGTTCGTGCCTACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMRGEKG*FVPTGK
Trigger: CTTCCCAGTAGGCACGAACAACCCCTTCTCTCCCCT...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGACCTCCACCAGCTTGGTaGGTCACGATGTGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGPPPAW*VTMCLF
Trigger: AAAGAGACACATCGTGACCAACCAAGCTGGTGGAGG...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCCCAAGCCTGACACAACTGACCTCTTTAGATaGAAGTCCAAGGCACTTTTT +
Preference number: 5 (lower is better)
Translates to: EVCSKTPMAKSPSPKPDTTDLFR*KSKALF
Trigger: AAAAAGTGCCTTGGACTTCAATCTAAAGAGGTCAGT...TGTGTCAGGCTTGGGGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCCCTCCCAGCGGACCCCTCTTCTGGACTGGCTTCGCTGTTGGCTACTTCAGTTCACACTTCCATATTTaGCACAGAGAAGAAAATGCA +
Preference number: 5 (lower is better)
Translates to: LPPSGPLFWTGFAVGYFSSHFHI*HREENA
Trigger: TGCATTTTCTTCTCTGTGCAAAATATGGAAGTGTGA...ACTGAAGTAGCCAACAGCGAAGCCAGTCCAGAAGAGGGGTCCGCTGGGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATGGTTTTTCCGCTTGTaGGCTTTGGGGAAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSWFFRL*ALGKVV
Trigger: CACCACCTTCCCCAAAGCCAACAAGCGGAAAAACCA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGCATCGGTGAAGAGCTaGCTGTGCAGCAGCATGACT +
Preference number: 5 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSASVKS*LCSSMT
Trigger: AGTCATGCTGCTGCACAGCAAGCTCTTCACCGATGC...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACAACTGGTGGATAGCTaGGAGGAACTTCCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRQLVDS*EELPLV
Trigger: CACCAGAGGAAGTTCCTCCAAGCTATCCACCAGTTG...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGAGGAGTGGGCAGATCTaGATCAGTACAGTATTGGAG +
Preference number: 5 (lower is better)
Translates to: KADSYRQLYNCRQAGPMERSGQI*ISTVLE
Trigger: CTCCAATACTGTACTGATCAAGATCTGCCCACTCCT...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGACCTGTCATTCTCTTGTaGTTCTCGTGGCCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGPVILL*FSWPVQ
Trigger: CTGCACTGGCCACGAGAACAACAAGAGAATGACAGG...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTGGGCCTTGTGTAGTTaGGAAAGCCGACCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: GKATRRELICILRPMGNAWALCS*ESRPRF
Trigger: AAACCGGGGTCGGCTTTCCAAACTACACAAGGCCCA...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGCCGATGCAACCTGGTTaGCACCTGTACAATATTGCA +
Preference number: 5 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEPMQPG*HLYNIA
Trigger: TGCAATATTGTACAGGTGCAAACCAGGTTGCATCGG...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAAAGGAAAGGAGAGAGGTGTGTTCAAAGACCCCCATGGCGAAGAGCCCATCCCAGAAAGAGAAGACCTTaGGCTAAGGTAGAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: KRKGERCVQRPPWRRAHPRKRRP*AKVEKG
Trigger: GCCTTTCTCTACCTTAGCCAAAGGTCTTCTCTTTCT...GGGATGGGCTCTTCGCCATGGGGGTCTTTGAACACACCTCTCTCCTTTCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGCATGACCTCTCTGACTaGGCCCTGCCTATTATGAAA +
Preference number: 5 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEHDLSD*ALPIMK
Trigger: TTTCATAATAGGCAGGGCCAAGTCAGAGAGGTCATG...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAGCTCCAGTCCTCTCTTaGGCTTGCTTCGGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELAPVLS*ACFGSL
Trigger: CAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGC...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGATGGACAGGGGCACTaGGGGTCTTCATCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFDGQGH*GSSSKS
Trigger: GGACTTGGATGAAGACCCCAAGTGCCCCTGTCCATC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGCCGTCCAGAAGAACTaGTACTCGCCAGGAATGGGG +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFAVQKN*YSPGMG
Trigger: CCCCATTCCTGGCGAGTACAAGTTCTTCTGGACGGC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATCACCAGAGTGTTGGCTaGGTCACTCAGCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHHQSVG*VTQLPL
Trigger: CAGAGGAAGCTGAGTGACCAAGCCAACACTCTGGTG...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAAGTCTGTGCACACTTTaGGCCAGGAAGAGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSSLCTL*ARKSGS
Trigger: ACTGCCACTCTTCCTGGCCAAAAGTGTGCACAGACT...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAGTAGGGGATCTGCCATaGGGTCAGTCCTCTAGGAGT +
Preference number: 5 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELVGDLP*GQSSRS
Trigger: ACTCCTAGAGGACTGACCCAATGGCAGATCCCCTAC...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGTTTGGAGTGTACTGTTaGTTGAGTTGCACTCTGGAG +
Preference number: 5 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEFGVYC*LSCTLE
Trigger: CTCCAGAGTGCAACTCAACAAACAGTACACTCCAAA...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTTTCACAGTATCTCAGTaGTGGTACTGTGATGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFFTVSQ*WYCDGS
Trigger: GCTCCCATCACAGTACCACAACTGAGATACTGTGAA...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAACTGTCACAGGGCACTaGGCACCTAGATTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSTVTGH*APRFGG
Trigger: ACCTCCAAATCTAGGTGCCAAGTGCCCTGTGACAGT...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTATGGGCCTTGTGTAGTTaGGAAAGCCGACCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELWALCS*ESRPRF
Trigger: AAACCGGGGTCGGCTTTCCAAACTACACAAGGCCCA...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACTGCACCTGTACAATATaGCACCAAAGCAACAACAGC +
Preference number: 5 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYCTCTI*HQSNNS
Trigger: GCTGTTGTTGCTTTGGTGCAATATTGTACAGGTGCA...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACAGAAAGAGAAGACCTTaGGCTAAGGTAGAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYRKRRP*AKVEKG
Trigger: GCCTTTCTCTACCTTAGCCAAAGGTCTTCTCTTTCT...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAATCTCCGTGAAGGGGTaGCTGTCCCGCCGGTGCACC +
Preference number: 5 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIISVKG*LSRRCT
Trigger: GGTGCACCGGCGGGACAGCAACCCCTTCACGGAGAT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAATTCCGCTTGTTGGCTTaGGGGAAGGTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQFRLLA*GKVVLL
Trigger: CAGCAGCACCACCTTCCCCAAAGCCAACAAGCGGAA...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGAAAACATGGAGTCCTTaGAGTACAAACCCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEKTWSP*STNPKR
Trigger: TCTCTTGGGGTTTGTACTCAAAGGACTCCATGTTTT...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAGTTTCCCGAAGGACATaGGCTGCAGCATTCTTGATC +
Preference number: 5 (lower is better)
Translates to: ATRRELICILRPMGNASGVSRRT*AAAFLI
Trigger: GATCAAGAATGCTGCAGCCAATGTCCTTCGGGAAAC...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTAGGTCCACCAGAGTGTaGGCTTGGTCACTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFRSTRV*AWSLSF
Trigger: GAAGCTGAGTGACCAAGCCAACACTCTGGTGGACCT...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTAGCAACTGCTTGAACTaGTGTACGGGGTCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: MFLDGKATRRELICILRPSNCLN*CTGSGR
Trigger: CCTTCCCGACCCCGTACACAAGTTCAAGCAGTTGCT...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGATTATTTAGCAACTGCTaGAACTTGTGTACGGGGTCG +
Preference number: 5 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGLFSNC*NLCTGS
Trigger: CGACCCCGTACACAAGTTCAAGCAGTTGCTAAATAA...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGAGGGGCTGGAAACCTGTaGCTGGATAAATACAGCTCA +
Preference number: 5 (lower is better)
Translates to: ATRRELICILRPMGNASGGAGNL*LDKYSS
Trigger: TGAGCTGTATTTATCCAGCAACAGGTTTCCAGCCCC...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACGGTAGGAATCACCAGTaGAAGGCTGTAGGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYGRNHQ*KAVGLN
Trigger: ATTTAAACCTACAGCCTTCAACTGGTGATTCCTACC...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACAGTGGCAGTGGAATCTaGCATGTCATTTGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYSGSGI*HVIWLK
Trigger: TTTCAACCAAATGACATGCAAGATTCCACTGCCACT...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGAAGGGGTTGTTCGTGCCTACTGGGAAGTCACCAGATAGCTGTCTAAGGTACTCCCTAATGTTTATTTaGGCGGCAGTAGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: EKGLFVPTGKSPDSCLRYSLMFI*AAVEKE
Trigger: TTCCTTCTCTACTGCCGCCAAAATAAACATTAGGGA...GTACCTTAGACAGCTATCTGGTGACTTCCCAGTAGGCACGAACAACCCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAACTGTCACAGGGCACTaGGCACCTAGATTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELTVTGH*APRFGG
Trigger: ACCTCCAAATCTAGGTGCCAAGTGCCCTGTGACAGT...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATCTGATGAAGAAGGTTaGATGTGGGGCCTGAGATTC +
Preference number: 5 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRSDEEG*MWGLRF
Trigger: GAATCTCAGGCCCCACATCAAACCTTCTTCATCAGA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAATCCCCCACCAGTATCTaGGCTCCAGTCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQSPTSI*APVLSL
Trigger: CAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGA...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGATTGAGCTGGCTGCCTaGCCTGGAGGAAGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GCRFHELLNFAIKDNISTIELAA*PGGRVE
Trigger: CTCCACCCTTCCTCCAGGCAAGGCAGCCAGCTCAAT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCAAAACATGGAGTCCTTaGAGTACAAACCCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIKTWSP*STNPKR
Trigger: TCTCTTGGGGTTTGTACTCAAAGGACTCCATGTTTT...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGATGGTGTTTCCTCACTTaGGCATGGTCAATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGWCFLT*AWSIFF
Trigger: AAAGAAGATTGACCATGCCAAAGTGAGGAAACACCA...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTCAACTGGTGGATAGCTaGGAGGAACTTCCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFQLVDS*EELPLV
Trigger: CACCAGAGGAAGTTCCTCCAAGCTATCCACCAGTTG...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAATGACATTCTGCATCTaGGAAAGGTCCACCAGAGTG +
Preference number: 5 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSMTFCI*ERSTRV
Trigger: CACTCTGGTGGACCTTTCCAAGATGCAGAATGTCAT...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGATTATTTAGCAACTGCTaGAACTTGTGTACGGGGTCG +
Preference number: 5 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGLFSNC*NLCTGS
Trigger: CGACCCCGTACACAAGTTCAAGCAGTTGCTAAATAA...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCATGGTCTGAATGTTTCTaGATGGCAAAGCGACCAGGA +
Preference number: 5 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSWSECF*MAKRPG
Trigger: TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCA...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCACGTGAAGACCTGAGATaGAGCGTGGATTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSREDLR*SVDFCS
Trigger: AGAACAGAAATCCACGCTCAATCTCAGGTCTTCACG...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGCGTGAAGACCTGAGATaGAGCGTGGATTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMREDLR*SVDFCS
Trigger: AGAACAGAAATCCACGCTCAATCTCAGGTCTTCACG...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGAATCTGTTTTGGCAAGTaGTGGGCAGCTCTCTTTTAC +
Preference number: 5 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRICFGK*WAALFY
Trigger: GTAAAAGAGAGCTGCCCACAACTTGCCAAAACAGAT...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAGGGGCTGGAAACCTGTaGCTGGATAAATACAGCTCA +
Preference number: 5 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELGAGNL*LDKYSS
Trigger: TGAGCTGTATTTATCCAGCAACAGGTTTCCAGCCCC...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGAGTACATGCTCAGCGCTaGGAATTTACTTTTGCGTAC +
Preference number: 5 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRVHAQR*EFTFAY
Trigger: GTACGCAAAAGTAAATTCCAAGCGCTGAGCATGTAC...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTAGGTGCTTATATGAATaGGCCAAAGATGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: LSVPWSECFLMAKRPGESRCLYE*AKDVDP
Trigger: TGGATCCACATCTTTGGCCAATTCATATAAGCACCT...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGTACTGTTTGTTGAGTaGCACTCTGGAGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHVLFVE*HSGGGG
Trigger: TCCTCCTCCTCCAGAGTGCAACTCAACAAACAGTAC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTAGGAGTGTACTGTTTGTaGAGTTGCACTCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELGVYCL*SCTLEE
Trigger: CTCCTCCAGAGTGCAACTCAACAAACAGTACACTCC...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATTTGGAGTGTACTGTTaGTTGAGTTGCACTCTGGAG +
Preference number: 5 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRFGVYC*LSCTLE
Trigger: CTCCAGAGTGCAACTCAACAAACAGTACACTCCAAA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGAACTCCAGTTCACGTTaGGGTGTTTCCAGTAATGGC +
Preference number: 5 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMNSSSR*GVSSNG
Trigger: GCCATTACTGGAAACACCCAAACGTGAACTGGAGTT...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTACTGGGCTCCATGTCCTaGATAAACATGTGGGAACCT +
Preference number: 5 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELLGSMS*INMWEP
Trigger: AGGTTCCCACATGTTTATCAAGGACATGGAGCCCAG...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGACATATAGCCATGGACTaGAATTACTGTCAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGHIAMD*NYCQEV
Trigger: GACCTCTTGACAGTAATTCAAGTCCATGGCTATATG...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGATCTAACCAGAGCAAGTaGGTTCATTACAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGSNQSK*VHYKLS
Trigger: TGACAGCTTGTAATGAACCAACTTGCTCTGGTTAGA...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGCTGACTCATACAGGCAGTTGTATAACTGTAGACAGGCAGGGCCCATGGAGAAGTATAATGTGTCCTaGAGCTTTGAGCACAGCAAT +
Preference number: 5 (lower is better)
Translates to: KADSYRQLYNCRQAGPMEKYNVS*SFEHSN
Trigger: ATTGCTGTGCTCAAAGCTCAAGGACACATTATACTT...CTCCATGGGCCCTGCCTGTCTACAGTTATACAACTGCCTGTATGAGTCAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TATTCCTTGTCCTTCTTGAGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCACATGACCTCTCTGACTaGGCCCTGCCTATTATGAAA +
Preference number: 5 (lower is better)
Translates to: YSLSFLSEAGRWLLRSDSHDLSD*ALPIMK
Trigger: TTTCATAATAGGCAGGGCCAAGTCAGAGAGGTCATG...TGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGACCCCACCGCTATACTaGCAGGAGCTCATGGCGATC +
Preference number: 5 (lower is better)
Translates to: GCRFHELLNFAIKDNISTTPPLY*QELMAI
Trigger: GATCGCCATGAGCTCCTGCAAGTATAGCGGTGGGGT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTACCCCACCGCTATACTaGCAGGAGCTCATGGCGATC +
Preference number: 5 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFTPPLY*QELMAI
Trigger: GATCGCCATGAGCTCCTGCAAGTATAGCGGTGGGGT...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGACAGGAGAGAGTTGATTaGCATCTTAAGACCTATGGG +
Preference number: 5 (lower is better)
Translates to: ATRRELICILRPMGNASGQERVD*HLKTYG
Trigger: CCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTG...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp CTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTCGAAACACAACTTGTTaGGATGGAAGAAGAAAACTC +
Preference number: 5 (lower is better)
Translates to: LSVPWSECFLMAKRPGESRNTTC*DGRRKL
Trigger: GAGTTTTCTTCTTCCATCCAAACAAGTTGTGTTTCG...ACTCTCTCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCGGTCTCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGATTCACTAAGGTGTTATaGGATTGCTCCTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SVSLLSVPWSECFLMAKRFTKVL*DCSCLC
Trigger: GCACAAACAGGAGCAATCCAATAACACCTTAGTGAA...TCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGAGACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTGGTGAAGACTTTTATTaGGACTTCAATCTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFGEDFY*DFNLRR
Trigger: CCTCCTTAGATTGAAGTCCAAATAAAAGTCTTCACC...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTGTACTGTTTGTTGAGTaGCACTCTGGAGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFVLFVE*HSGGGG
Trigger: TCCTCCTCCTCCAGAGTGCAACTCAACAAACAGTAC...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGAGGGGAGAGAAGGGGTaGTTCGTGCCTACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: GCRFHELLNFAIKDNISTRGEKG*FVPTGK
Trigger: CTTCCCAGTAGGCACGAACAACCCCTTCTCTCCCCT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCTTCTTTCCGTTCCCTGGTCTGAATGTTTCTTGATGGCAAAGCGACCAGGAGATTTGACAATGGTTTaGTTCAGAGGGAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: SLLSVPWSECFLMAKRPGDLTMV*FRGNSS
Trigger: ACTGGAGTTCCCTCTGAACAAAACCATTGTCAAATC...TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCAGGGAACGGAAAGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCACTCAGAAACAGTCATaGGGAGAGCAGGCTGACAGT +
Preference number: 5 (lower is better)
Translates to: LTNPMVASSRTEACKFSFTQKQS*GEQADS
Trigger: ACTGTCAGCCTGCTCTCCCAATGACTGTTTCTGAGT...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTTGTCCAATTCTGACATaGTCAAAGGAAAACTGGTTG +
Preference number: 5 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFCPILT*SKENWL
Trigger: CAACCAGTTTTCCTTTGACAATGTCAGAATTGGACA...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTAAACATGTGGGAACCTaGCTCCCTCAAGGGTATTGC +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFKHVGT*LPQGYC
Trigger: GCAATACCCTTGAGGGAGCAAGGTTCCCACATGTTT...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCCTTTCCTTGCCCACCTaGGAGTGTTTCTTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LTNPMVASSRTEACKFSFLSLPT*ECFLLV
Trigger: CACCAACAAGAAACACTCCAAGGTGGGCAAGGAAAG...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTAGCTGGAGAGATCTGTaGTCTTTCTGGTCACCTCTG +
Preference number: 5 (lower is better)
Translates to: MFLDGKATRRELICILRPSWRDL*SFWSPL
Trigger: CAGAGGTGACCAGAAAGACAACAGATCTCTCCAGCT...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTGGGTGCCCGGCAATCACTAACAGTGATGTGTACTCAGAAACAGTCATTGGGATACAGGGTTTTCAACTaGGGGAAATTCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: LGARQSLTVMCTQKQSLGYRVFN*GKFISH
Trigger: ATGGGAAATGAATTTCCCCAAGTTGAAAACCCTGTA...TCCCAATGACTGTTTCTGAGTACACATCACTGTTAGTGATTGCCGGGCACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTCTTATAGCCAATGTTTaGGTTTTTCCGCTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: GKATRRELICILRPMGNALIANV*VFPLVG
Trigger: GCCAACAAGCGGAAAAACCAAAACATTGGCTATAAG...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACGCATCGGTGAAGAGCTaGCTGTGCAGCAGCATGACT +
Preference number: 5 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDASVKS*LCSSMT
Trigger: AGTCATGCTGCTGCACAGCAAGCTCTTCACCGATGC...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTGTTTCCCGAAGGACATaGGCTGCAGCATTCTTGATC +
Preference number: 5 (lower is better)
Translates to: FQSDSSISVLASCGQLSFVSRRT*AAAFLI
Trigger: GATCAAGAATGCTGCAGCCAATGTCCTTCGGGAAAC...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTGGTCTGAATGTTTCTaGATGGCAAAGCGACCAGGA +
Preference number: 5 (lower is better)
Translates to: MFLDGKATRRELICILRPWSECF*MAKRPG
Trigger: TCCTGGTCGCTTTGCCATCAAGAAACATTCAGACCA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTACAGGAGCACCATTCTaGGGACATGAAACAAGGAGG +
Preference number: 5 (lower is better)
Translates to: FQSDSSISVLASCGQLSFTGAPF*GHETRR
Trigger: CCTCCTTGTTTCATGTCCCAAGAATGGTGCTCCTGT...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGTACATGCTCAGCGCTaGGAATTTACTTTTGCGTAC +
Preference number: 5 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHVHAQR*EFTFAY
Trigger: GTACGCAAAAGTAAATTCCAAGCGCTGAGCATGTAC...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCAATAATAAAAATAGCTaGTACATGCTCAGCGCTTGG +
Preference number: 5 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHINNKNS*YMLSAW
Trigger: CCAAGCGCTGAGCATGTACAAGCTATTTTTATTATT...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTAGGTGCTTATATGAATaGGCCAAAGATGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: GKATRRELICILRPMGNARCLYE*AKDVDP
Trigger: TGGATCCACATCTTTGGCCAATTCATATAAGCACCT...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTCAGTCTGGGCTGCTGTaGATGACAAAGGTGATTTCA +
Preference number: 5 (lower is better)
Translates to: MFLDGKATRRELICILRPQSGLL*MTKVIS
Trigger: TGAAATCACCTTTGTCATCAACAGCAGCCCAGACTG...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCATCACTTCTCCTCCTAGCTCAGAGGCTCACAATTGAGGCACTTGGCCCTTTTTCCTGGGATGAAACATaGATTCTTAATTTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: SSLLLLAQRLTIEALGPFSWDET*ILNLEC
Trigger: ACACTCCAAATTAAGAATCAATGTTTCATCCCAGGA...AAAAGGGCCAAGTGCCTCAATTGTGAGCCTCTGAGCTAGGAGGAGAAGTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAGGCATGGATCCTAACTGCAGGTaGGAGTTGAATTTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: RSQVEAPKQRLDFWFQGMDPNCR*ELNFVL
Trigger: AAGCACAAAATTCAACTCCAACCTGCAGTTAGGATC...CATGCCTTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGAACAGGCCCAGTGCTACAGAATAAAAATCTCCATGCCAAGCCACTGCCTTCATGTCCAATTCTGACATaGTCAAAGGAAAACTGGTTG +
Preference number: 5 (lower is better)
Translates to: RTGPVLQNKNLHAKPLPSCPILT*SKENWL
Trigger: CAACCAGTTTTCCTTTGACAATGTCAGAATTGGACA...TGAAGGCAGTGGCTTGGCATGGAGATTTTTATTCTGTAGCACTGGGCCTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTCATTCCAGATGCCCTAAGCCTGGGTCTGGACACATGTGGTCAATACACATCCCAGGAGAAAACTTGTaGTTTTGCACTATCTGTAAA +
Preference number: 5 (lower is better)
Translates to: SHSRCPKPGSGHMWSIHIPGENL*FCTICK
Trigger: TTTACAGATAGTGCAAAACAACAAGTTTTCTCCTGG...GATGTGTATTGACCACATGTGTCCAGACCCAGGCTTAGGGCATCTGGAATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGCTTTCCTTGCCCACCTaGGAGTGTTTCTTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVLSLPT*ECFLLV
Trigger: CACCAACAAGAAACACTCCAAGGTGGGCAAGGAAAG...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACAAGTGGTCATTGAGATaGAGCTGGCTGCCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDKWSLR*SWLPCL
Trigger: CAGGCAAGGCAGCCAGCTCAATCTCAATGACCACTT...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCTCTTCGCTCCGGTCATaGAGTTCTGTGATTAAGTCA +
Preference number: 5 (lower is better)
Translates to: LTNPMVASSRTEACKFSFSSLRS*SSVIKS
Trigger: TGACTTAATCACAGAACTCAATGACCGGAGCGAAGA...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TCTTCCCGCTCCCAAGTAGAGGCACCTAAACAGAGATTAGATTTCTGGTTTCAAAGTGGCAGTGGAATCTaGCATGTCATTTGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SSRSQVEAPKQRLDFWFQSGSGI*HVIWLK
Trigger: TTTCAACCAAATGACATGCAAGATTCCACTGCCACT...TTGAAACCAGAAATCTAATCTCTGTTTAGGTGCCTCTACTTGGGAGCGGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTTCTGGATCAAAGGAAAACTGGTaGGCTAGGTTTGAGACTTAT +
Preference number: 5 (lower is better)
Translates to: ATRRELICILRPMGNASGSKENW*ARFETY
Trigger: ATAAGTCTCAAACCTAGCCAACCAGTTTTCCTTTGA...TCCAGAAGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAATCTGATGAAGAAGGTTaGATGTGGGGCCTGAGATTC +
Preference number: 5 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQSDEEG*MWGLRF
Trigger: GAATCTCAGGCCCCACATCAAACCTTCTTCATCAGA...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTCTTATAGCCAATGTTTaGGTTTTTCCGCTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFLIANV*VFPLVG
Trigger: GCCAACAAGCGGAAAAACCAAAACATTGGCTATAAG...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTTGGTGTTTCCTCACTTaGGCATGGTCAATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: MFLDGKATRRELICILRPWCFLT*AWSIFF
Trigger: AAAGAAGATTGACCATGCCAAAGTGAGGAAACACCA...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271915.9
ENST00000361147.8
ENST00000618040.4
CDS-3UTR CAA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGATCTGTTTTGGCAAGTaGTGGGCAGCTCTCTTTTAC +
Preference number: 5 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVICFGK*WAALFY
Trigger: GTAAAAGAGAGCTGCCCACAACTTGCCAAAACAGAT...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACGCCTTGGCTCTACAATaGTCTACCTTGTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDALALQ*STLCCP
Trigger: AGGACAGCACAAGGTAGACAATTGTAGAGCCAAGGC...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTGCCTTGGCTCTACAATaGTCTACCTTGTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFALALQ*STLCCP
Trigger: AGGACAGCACAAGGTAGACAATTGTAGAGCCAAGGC...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTATGGGTAATGCTAATAATAAAAATAGCTaGTACATGCTCAGCGCTTGG +
Preference number: 5 (lower is better)
Translates to: GKATRRELICILRPMGNANNKNS*YMLSAW
Trigger: CCAAGCGCTGAGCATGTACAAGCTATTTTTATTATT...AGCATTACCCATAGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTCACGATGTGTCTCTTTaGCTTGTTTCAACACATAGC +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFHDVSL*LVSTHS
Trigger: GCTATGTGTTGAAACAAGCAAAAGAGACACATCGTG...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATAACAAGAAAACTTGTGTACAAGTTAGGGCTCAGCTACACAAACAGACTGAAATTTTCCTCCACCAGCTaGGTTGGTCACGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: ITRKLVYKLGLSYTNRLKFSSTS*VGHDVS
Trigger: AGACACATCGTGACCAACCAAGCTGGTGGAGGAAAA...TTTCAGTCTGTTTGTGTAGCTGAGCCCTAACTTGTACACAAGTTTTCTTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTAAACATGTGGGAACCTaGCTCCCTCAAGGGTATTGC +
Preference number: 5 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFKHVGT*LPQGYC
Trigger: GCAATACCCTTGAGGGAGCAAGGTTCCCACATGTTT...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GAGATTAGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATAGATGGAATACAACTTaGAGGGGAAAGGTCAGAATA +
Preference number: 5 (lower is better)
Translates to: EIRFLVSRHVGPSTLNEHRWNTT*RGKVRI
Trigger: TATTCTGACCTTTCCCCTCAAAGTTGTATTCCATCT...ATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCTAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTCAGCTGCTCTGTAGAGAAAGAGGGGTGTAGATTCCATGAGTTGCTTAATTTTCATATAGCCATGGACTaGAATTACTGTCAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: LSCSVEKEGCRFHELLNFHIAMD*NYCQEV
Trigger: GACCTCTTGACAGTAATTCAAGTCCATGGCTATATG...AAAATTAAGCAACTCATGGAATCTACACCCCTCTTTCTCTACAGAGCAGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGGCGACCAGGAGAGAGTaGATTTGCATCTTAAGACCT +
Preference number: 5 (lower is better)
Translates to: GCRFHELLNFAIKDNISTATRRE*ICILRP
Trigger: AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGC...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATGTTTCTTGATGGCAAAGCGACCAGGAGAGAGTTGATTTGCATCTTAAGACCTCCATCGAAACACAACTaGTTTGGATGGAAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: MFLDGKATRRELICILRPPSKHN*FGWKKK
Trigger: TTTCTTCTTCCATCCAAACAAGTTGTGTTTCGATGG...AGGTCTTAAGATGCAAATCAACTCTCTCCTGGTCGCTTTGCCATCAAGAAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ACAATTTTGGCTTGGCATCCATTTCAAATCAAGCAAGGTGCATATCCAGGACAAGGTAGGAATCACCAGTaGAAGGCTGTAGGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: TILAWHPFQIKQGAYPGQGRNHQ*KAVGLN
Trigger: ATTTAAACCTACAGCCTTCAACTGGTGATTCCTACC...TTGTCCTGGATATGCACCTTGCTTGATTTGAAATGGATGCCAAGCCAAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGAGGAGTGGGCAGATCTaGATCAGTACAGTATTGGAG +
Preference number: 5 (lower is better)
Translates to: GCRFHELLNFAIKDNISTRSGQI*ISTVLE
Trigger: CTCCAATACTGTACTGATCAAGATCTGCCCACTCCT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGATTTCTGGTTTCAAGGCATGTCGGACCAAGCACGCTGAATGAACATGAGTTATCCTGGGATGAAACATaGATTCTTAATTTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: RFLVSRHVGPSTLNEHELSWDET*ILNLEC
Trigger: ACACTCCAAATTAAGAATCAATGTTTCATCCCAGGA...TAACTCATGTTCATTCAGCGTGCTTGGTCCGACATGCCTTGAAACCAGAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGTATTCCTTGTCCTTCTaGAGTGAAGCTGGACGTTGG +
Preference number: 5 (lower is better)
Translates to: GCRFHELLNFAIKDNISTYSLSF*SEAGRW
Trigger: CCAACGTCCAGCTTCACTCAAGAAGGACAAGGAATA...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GCCATGAAAATGTTTCCTCCATTAACATCCTGTCATTCTCTTGTTGTTCTCGTGAGTCTGGGACCAAAATaGAGTTGTTGCGCCATTAAA +
Preference number: 5 (lower is better)
Translates to: AMKMFPPLTSCHSLVVLVSLGPK*SCCAIK
Trigger: TTTAATGGCGCAACAACTCAATTTTGGTCCCAGACT...CACGAGAACAACAAGAGAATGACAGGATGTTAATGGAGGAAACATTTTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAACTCAGAAACAGTCATaGGGAGAGCAGGCTGACAGT +
Preference number: 5 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYITQKQS*GEQADS
Trigger: ACTGTCAGCCTGCTCTCCCAATGACTGTTTCTGAGT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp CTTACAAATCCAATGGTGGCCAGCAGTAGAACTGAAGCCTGTAAGTTTTCATTCTCAAAGGAAAACTGGTaGGCTAGGTTTGAGACTTAT +
Preference number: 5 (lower is better)
Translates to: LTNPMVASSRTEACKFSFSKENW*ARFETY
Trigger: ATAAGTCTCAAACCTAGCCAACCAGTTTTCCTTTGA...GAATGAAAACTTACAGGCTTCAGTTCTACTGCTGGCCACCATTGGATTTGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTCCGATGCAACCTGGTTaGCACCTGTACAATATTGCA +
Preference number: 5 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFPMQPG*HLYNIA
Trigger: TGCAATATTGTACAGGTGCAAACCAGGTTGCATCGG...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGAATTCACGTCTTTCCTaGCCCACCTTGGAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: GCRFHELLNFAIKDNISTNSRLS*PTLECF
Trigger: GAAACACTCCAAGGTGGGCAAGGAAAGACGTGAATT...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAAGCTGGAGAGATCTGTaGTCTTTCTGGTCACCTCTG +
Preference number: 5 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYISWRDL*SFWSPL
Trigger: CAGAGGTGACCAGAAAGACAACAGATCTCTCCAGCT...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGTCTTCGCTCCGGTCATaGAGTTCTGTGATTAAGTCA +
Preference number: 5 (lower is better)
Translates to: GCRFHELLNFAIKDNISTSSLRS*SSVIKS
Trigger: TGACTTAATCACAGAACTCAATGACCGGAGCGAAGA...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp TTTCAGTCTGATTCGAGTATATCTGTTTTGGCAAGTTGTGGGCAGCTCTCTTTTTTAAGTCATCAAGGGTaGATTGTACTTGCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: FQSDSSISVLASCGQLSFLSHQG*IVLAGE
Trigger: TTCTCCTGCAAGTACAATCAACCCTTGATGACTTAA...AAAAGAGAGCTGCCCACAACTTGCCAAAACAGATATACTCGAATCAGACTGAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp ATTTATGGGAAGGAAAGTAAGGGTACAGGGTTTTCAACTTGGGGAAATTCATTTCGAAACACAACTTGTTaGGATGGAAGAAGAAAACTC +
Preference number: 5 (lower is better)
Translates to: IYGKESKGTGFSTWGNSFRNTTC*DGRRKL
Trigger: GAGTTTTCTTCTTCCATCCAAACAAGTTGTGTTTCG...AAATGAATTTCCCCAAGTTGAAAACCCTGTACCCTTACTTTCCTTCCCATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACGGTGAAGACTTTTATTaGGACTTCAATCTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDGEDFY*DFNLRR
Trigger: CCTCCTTAGATTGAAGTCCAAATAAAAGTCTTCACC...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATAGATCCTAACTGCAGGTaGGAGTTGAATTTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIDPNCR*ELNFVL
Trigger: AAGCACAAAATTCAACTCCAACCTGCAGTTAGGATC...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp GGGTGTAGATTCCATGAGTTGCTTAATTTTGCTATAAAGGACAATATCTCAACGTGGAATAATGTTCTTTaGTCTCTAATACCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GCRFHELLNFAIKDNISTWNNVL*SLIPRP
Trigger: AGGCCTGGGTATTAGAGACAAAAGAACATTATTCCA...CGTTGAGATATTGTCCTTTATAGCAAAATTAAGCAACTCATGGAATCTACACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AAGGATATGGAGTGCTATTTAGGTAAGACCGGAAAAAGACTATCTCTTATTGACCCAGGAGAAAACTTGTaGTTTTGCACTATCTGTAAA +
Preference number: 5 (lower is better)
Translates to: KDMECYLGKTGKRLSLIDPGENL*FCTICK
Trigger: TTTACAGATAGTGCAAAACAACAAGTTTTCTCCTGG...GTCAATAAGAGATAGTCTTTTTCCGGTCTTACCTAAATAGCACTCCATATCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS-3UTR CAA 90 bp AGTGAAGCTGGACGTTGGCTGCTTCGATCTGATTCAGATATATATATATATATATACAGGGTTTTCAACTaGGGGAAATTCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: SEAGRWLLRSDSDIYIYIYRVFN*GKFISH
Trigger: ATGGGAAATGAATTTCCCCAAGTTGAAAACCCTGTA...TATATATATATATATATCTGAATCAGATCGAAGCAGCCAACGTCCAGCTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 72 bp CTGTCCCGCCGGTGCACCAGGGGGCTGGCCTGTCGGTaGCGGCTGCCTCCGCCAGGCCCACTTGTAGCTGTG +
Preference number: 6 (lower is better)
Translates to: LSRRCTRGLACR*RLPPPGPLVAV
Trigger: CACAGCTACAAGTGGGCCTGGCGGAGGCAGCCGGCACCGACAGGCCAGCCCCCTGGTGCACCGGCGGGACAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CAA 90 bp CCACCGCTATACTTGCAGGAGCTCATGGCGATCTCCGTGAAGGGGTaGCTGTCCCGCCGGTGCACCAGGGGGCTGGCCTGTCGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: PPLYLQELMAISVKG*LSRRCTRGLACRCR
Trigger: CCGGCACCGACAGGCCAGCCCCCTGGTGCACCGGCGGGACAGCAACCCCTTCACGGAGATCGCCATGAGCTCCTGCAAGTATAGCGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 72 bp ACACCCCGGGCCTCGATGATGGCAGACAGGAGCTGCTaGTGCTGCTGGCGCAGGGTGTCGGCGATGAGCAGC +
Preference number: 6 (lower is better)
Translates to: TPRASMMADRSC*CCWRRVSAMSS
Trigger: GCTGCTCATCGCCGACACCCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGCCATCATCGAGGCCCGGGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000515643.1
ENST00000618040.4
CDS GCA 72 bp CTGACACCCCGGGCCTCGATGATGGCAGACAGGAGCTaGTGCTGCTGCTGGCGCAGGGTGTCGGCGATGAGC +
Preference number: 6 (lower is better)
Translates to: LTPRASMMADRS*CCCWRRVSAMS
Trigger: GCTCATCGCCGACACCCTGCGCCAGCAGCAGCAGCAGCTCCTGTCTGCCATCATCGAGGCCCGGGGTGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000515643.1
ENST00000618040.4
CDS CCA 72 bp CCACTCCCTCTGGGAGGGAAACCCCCTCCTCCGTCTTaGGGCTGGACTGAGAGGCTGGAGCAGTGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: PLPLGGKPPPPS*GWTERLEQWGQ
Trigger: CTGGCCCCACTGCTCCAGCCTCTCAGTCCAGCCCCAAGACGGAGGAGGGGGTTTCCCTCCCAGAGGGAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358505.2
CDS GCA 72 bp GGCGGTGGTGGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGCTGCTGCTCATCCCCAGAGGATGGACAGGGG +
Preference number: 6 (lower is better)
Translates to: GGGGCCCCCCCC*CCCSSPEDGQG
Trigger: CCCCTGTCCATCCTCTGGGGATGAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCACCACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 72 bp GGTGGCGCTGGCGGTGGTGGCTGCTGCTGCTGTTGCTaGTGCTGCTGCTGCTGCTGCTCATCCCCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: GGAGGGGCCCCC*CCCCCCSSPED
Trigger: ATCCTCTGGGGATGAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCACCACCGCCAGCGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS TCA 72 bp CACCGCTATACTTGCAGGAGCTCATGGCGATCTCCGTaGAGGGGTTGCTGTCCCGCCGGTGCACCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: HRYTCRSSWRSP*RGCCPAGAPGG
Trigger: GCCCCCTGGTGCACCGGCGGGACAGCAACCCCTTCACGGAGATCGCCATGAGCTCCTGCAAGTATAGCGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 72 bp GAGCAGTGGGGCCAGCTCCCCGCTAAAGCCAGTGCCTaGTGTTCTCCATCCGGGCGCGCACTCACACACACA +
Preference number: 6 (lower is better)
Translates to: EQWGQLPAKASA*CSPSGRALTHT
Trigger: TGTGTGTGTGAGTGCGCGCCCGGATGGAGAACAGCAGGCACTGGCTTTAGCGGGGAGCTGGCCCCACTGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358505.2
CDS CCA 72 bp GGAGGTGGAGCTGACCCCAATGGGGCTATCGGAGATTaGGGTGTGGGTGGTGCCCACTGCCACGCTGACACC +
Preference number: 6 (lower is better)
Translates to: GGGADPNGAIGD*GVGGAHCHADT
Trigger: GGTGTCAGCGTGGCAGTGGGCACCACCCACACCCCAATCTCCGATAGCCCCATTGGGGTCAGCTCCACCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000618040.4
CDS CAA 72 bp TACTTGCAGGAGCTCATGGCGATCTCCGTGAAGGGGTaGCTGTCCCGCCGGTGCACCAGGGGGCTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: YLQELMAISVKG*LSRRCTRGLAC
Trigger: ACAGGCCAGCCCCCTGGTGCACCGGCGGGACAGCAACCCCTTCACGGAGATCGCCATGAGCTCCTGCAAGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS TCA 72 bp GTGCCGGCATGCTGGTGGTTGTGGGTGGCATTAGGGTaGTGGAGCAGGGTCTGGTGGGCATGGTTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: VPACWWLWVALG*WSRVWWAWLSS
Trigger: GGAGGACAACCATGCCCACCAGACCCTGCTCCATCACCCTAATGCCACCCACAACCACCAGCATGCCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 72 bp ATGCTGCGGGACGAGGCATCGGTGAAGAGCTTGCTGTaGAGCAGCATGACTCGGGCGATCAGGTACAGGCGC +
Preference number: 6 (lower is better)
Translates to: MLRDEASVKSLL*SSMTRAIRYRR
Trigger: GCGCCTGTACCTGATCGCCCGAGTCATGCTGCTGCACAGCAAGCTCTTCACCGATGCCTCGTCCCGCAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000618040.4
CDS CAA 72 bp ACCCCCGAGTCATGGAAGTGCCCAGAAGTGTCCATCTaGGGGCCTGGCTGTATTCCCTGCAGCACAAGCCCC +
Preference number: 6 (lower is better)
Translates to: TPESWKCPEVSI*GPGCIPCSTSP
Trigger: GGGGCTTGTGCTGCAGGGAATACAGCCAGGCCCCAAGATGGACACTTCTGGGCACTTCCATGACTCGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 72 bp GGTGCTCCCCCAGCTGATTCCAAGGCGGCGCCCAGCTaGTCTGCCCAGGTAACACCTGTAGCCATTTTTATC +
Preference number: 6 (lower is better)
Translates to: GAPPADSKAAPS*SAQVTPVAIFI
Trigger: GATAAAAATGGCTACAGGTGTTACCTGGGCAGAGCAGCTGGGCGCCGCCTTGGAATCAGCTGGGGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358505.2
CDS CCA 72 bp TCTCCCCCACCAGTATCTTGGCTCCAGTCCTCTCTTTaGCTTGCTTCGGTTCTCTGGGGCTGCCTGGAGTCC +
Preference number: 6 (lower is better)
Translates to: SPPPVSWLQSSL*LASVLWGCLES
Trigger: GGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CAA 90 bp TCCAATCTCCCCCACCAGTATCTTGGCTCCAGTCCTCTCTTTGGCTaGCTTCGGTTCTCTGGGGCTGCCTGGAGTCCAGACGCTGCCACT +
Preference number: 6 (lower is better)
Translates to: SNLPHQYLGSSPLFG*LRFSGAAWSPDAAT
Trigger: AGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGATTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CAA 90 bp AGGCATCCAATCTCCCCCACCAGTATCTTGGCTCCAGTCCTCTCTTaGGCTTGCTTCGGTTCTCTGGGGCTGCCTGGAGTCCAGACGCTG +
Preference number: 6 (lower is better)
Translates to: RHPISPTSILAPVLS*ACFGSLGLPGVQTL
Trigger: CAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGATTGGATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CAA 72 bp ATCTCCCCCACCAGTATCTTGGCTCCAGTCCTCTCTTaGGCTTGCTTCGGTTCTCTGGGGCTGCCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: ISPTSILAPVLS*ACFGSLGLPGV
Trigger: GACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 72 bp CAGTCCTCTCTTTGGCTTGCTTCGGTTCTCTGGGGCTaGCTGGAGTCCAGACGCTGCCACTCAAGAATGCAT +
Preference number: 6 (lower is better)
Translates to: QSSLWLASVLWG*LESRRCHSRMH
Trigger: ATGCATTCTTGAGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS GCA 72 bp GTGAGATGCTCCAGCTTCGACTCCAGGCTGCCAATCTaGTTCTCCAGGTCTTCGCTCCGGTCATTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: VRCSSFDSRLPI*FSRSSLRSLSS
Trigger: AGAACTCAATGACCGGAGCGAAGACCTGGAGAAGCAGATTGGCAGCCTGGAGTCGAAGCTGGAGCATCTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000618040.4
CDS GCA 72 bp TGGCAGGCCTGGTATCAGCAAGCTCTAAGGAGTAGGTaGCAGCTCAGTCCCTGCAAGGAGTGTCCTTTAAGC +
Preference number: 6 (lower is better)
Translates to: WQAWYQQALRSR*QLSPCKECPLS
Trigger: GCTTAAAGGACACTCCTTGCAGGGACTGAGCTGGCACCTACTCCTTAGAGCTTGCTGATACCAGGCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS CCA 72 bp CCTCTCTTTGGCTTGCTTCGGTTCTCTGGGGCTGCCTaGAGTCCAGACGCTGCCACTCAAGAATGCATTGTA +
Preference number: 6 (lower is better)
Translates to: PLFGLLRFSGAA*SPDAATQECIV
Trigger: TACAATGCATTCTTGAGTGGCAGCGTCTGGACTCCAGGCAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 72 bp CAAACAACTGTCCTTGCAGATGTCGCGTGGCAGGCCTaGTATCAGCAAGCTCTAAGGAGTAGGTGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: QTTVLADVAWQA*YQQALRSRCQL
Trigger: GAGCTGGCACCTACTCCTTAGAGCTTGCTGATACCAGGCCTGCCACGCGACATCTGCAAGGACAGTTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS CAA 90 bp ATGTCCTCAAAGAAAGCCAGGCATCCAATCTCCCCCACCAGTATCTaGGCTCCAGTCCTCTCTTTGGCTTGCTTCGGTTCTCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: MSSKKARHPISPTSI*APVLSLACFGSLGL
Trigger: CAGCCCCAGAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGATTGGATGCCTGGCTTTCTTTGAGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 72 bp AGAAAGCCAGGCATCCAATCTCCCCCACCAGTATCTTaGCTCCAGTCCTCTCTTTGGCTTGCTTCGGTTCTC +
Preference number: 6 (lower is better)
Translates to: RKPGIQSPPPVS*LQSSLWLASVL
Trigger: GAGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGATTGGATGCCTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 72 bp CTTGTAGCTGTGGAACTTGGAGAGTGGCCAAGCAAGTaGTCATTGAGATTGAGCTGGCTGCCTTGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: LVAVELGEWPSK*SLRLSWLPCLE
Trigger: CTCCAGGCAAGGCAGCCAGCTCAATCTCAATGACCACTTGCTTGGCCACTCTCCAAGTTCCACAGCTACAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 72 bp TATAGCCAATGTTTTGGTTTTTCCGCTTGTTGGCTTTaGGGAAGGTGGTGCTGCTGGCGGTGGTGCCGGCAT +
Preference number: 6 (lower is better)
Translates to: YSQCFGFSACWL*GRWCCWRWCRH
Trigger: ATGCCGGCACCACCGCCAGCAGCACCACCTTCCCCAAAGCCAACAAGCGGAAAAACCAAAACATTGGCTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CCA 72 bp TCATGGTACCAAGCAGGAAGTGATGAGCCAGAAGGCTaGGCTGGTGATTCAGGACTTTCACAGACACGGACG +
Preference number: 6 (lower is better)
Translates to: SWYQAGSDEPEG*AGDSGLSQTRT
Trigger: CGTCCGTGTCTGTGAAAGTCCTGAATCACCAGCCCAGCCTTCTGGCTCATCACTTCCTGCTTGGTACCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618040.4
CDS CCA 72 bp GCAAAACACCAAACAACTGTCCTTGCAGATGTCGCGTaGCAGGCCTGGTATCAGCAAGCTCTAAGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: AKHQTTVLADVA*QAWYQQALRSR
Trigger: CCTACTCCTTAGAGCTTGCTGATACCAGGCCTGCCACGCGACATCTGCAAGGACAGTTGTTTGGTGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS CCA 72 bp GCACCCAGAAAGTTACTAGTTACGTCCTGCTGGTCATaGTACCAAGCAGGAAGTGATGAGCCAGAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: APRKLLVTSCWS*YQAGSDEPEGW
Trigger: CCAGCCTTCTGGCTCATCACTTCCTGCTTGGTACCATGACCAGCAGGACGTAACTAGTAACTTTCTGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618040.4
CDS CAA 72 bp AAGAAAGCCAGGCATCCAATCTCCCCCACCAGTATCTaGGCTCCAGTCCTCTCTTTGGCTTGCTTCGGTTCT +
Preference number: 6 (lower is better)
Translates to: KKARHPISPTSI*APVLSLACFGS
Trigger: AGAACCGAAGCAAGCCAAAGAGAGGACTGGAGCCAAGATACTGGTGGGGGAGATTGGATGCCTGGCTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS CAA 72 bp CAGGGCCCTCCTGTGTCCCAGCTTATAGCCAATGTTTaGGTTTTTCCGCTTGTTGGCTTTGGGGAAGGTGGT +
Preference number: 6 (lower is better)
Translates to: QGPPVSQLIANV*VFPLVGFGEGG
Trigger: ACCACCTTCCCCAAAGCCAACAAGCGGAAAAACCAAAACATTGGCTATAAGCTGGGACACAGGAGGGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271915.9
ENST00000618040.4
CDS TCA 72 bp TGCTTCTGGAGTGGGGAGATTTATTTAGCAACTGCTTaGACTTGTGTACGGGGTCGGGAAGGAGGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: CFWSGEIYLATA*TCVRGREGGGA
Trigger: AGCTCCACCTCCTTCCCGACCCCGTACACAAGTTCAAGCAGTTGCTAAATAAATCTCCCCACTCCAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000618040.4
CDS CCA 72 bp CACATGGCACCCAGAAAGTTACTAGTTACGTCCTGCTaGTCATGGTACCAAGCAGGAAGTGATGAGCCAGAA +
Preference number: 6 (lower is better)
Translates to: HMAPRKLLVTSC*SWYQAGSDEPE
Trigger: TTCTGGCTCATCACTTCCTGCTTGGTACCATGACCAGCAGGACGTAACTAGTAACTTTCTGGGTGCCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618040.4
CDS CAA 72 bp ATTCTGCATCTTGGAAAGGTCCACCAGAGTGTTGGCTaGGTCACTCAGCTTCCTCTGTTCCATCTTGACGCT +
Preference number: 6 (lower is better)
Translates to: ILHLGKVHQSVG*VTQLPLFHLDA
Trigger: AGCGTCAAGATGGAACAGAGGAAGCTGAGTGACCAAGCCAACACTCTGGTGGACCTTTCCAAGATGCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000618040.4
CDS CAA 72 bp ATCTATAACCTGAAGCAAAACACCAAACAACTGTCCTaGCAGATGTCGCGTGGCAGGCCTGGTATCAGCAAG +
Preference number: 6 (lower is better)
Translates to: IYNLKQNTKQLS*QMSRGRPGISK
Trigger: CTTGCTGATACCAGGCCTGCCACGCGACATCTGCAAGGACAGTTGTTTGGTGTTTTGCTTCAGGTTATAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361147.8
CDS CAA 90 bp GACTCCAGGCTGCCAATCTGCTTCTCCAGGTCTTCGCTCCGGTCATaGAGTTCTGTGATTAAGTCATACATGACATTCTGCATCTTGGAA +
Preference number: 6 (lower is better)
Translates to: DSRLPICFSRSSLRS*SSVIKSYMTFCILE
Trigger: TTCCAAGATGCAGAATGTCATGTATGACTTAATCACAGAACTCAATGACCGGAGCGAAGACCTGGAGAAGCAGATTGGCAGCCTGGAGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000618040.4
CDS CAA 72 bp CTGCCAATCTGCTTCTCCAGGTCTTCGCTCCGGTCATaGAGTTCTGTGATTAAGTCATACATGACATTCTGC +
Preference number: 6 (lower is better)
Translates to: LPICFSRSSLRS*SSVIKSYMTFC
Trigger: GCAGAATGTCATGTATGACTTAATCACAGAACTCAATGACCGGAGCGAAGACCTGGAGAAGCAGATTGGCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271915.9
ENST00000358505.2
ENST00000361147.8
ENST00000618040.4