RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000080709

Ensembl transcript IDs: ENST00000264773.7, ENST00000503706.5, ENST00000505491.1, ENST00000506812.2, ENST00000507750.5, ENST00000512097.9, ENST00000512927.2, ENST00000610748.4, ENST00000631899.2, ENST00000632892.1, ENST00000673685.1

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCACAGCGGCGAGGAGGTaGGGGTCCGGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPTAARR*GSGRRR
Trigger: GCGGCGCCTTCCGGACCCGCACCTCCTCGCCGCTGT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGGGCTGGCGGCGGGCTaGAGGCTGTGGCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQGLAAG*RLWHWW
Trigger: CCACCAGTGCCACAGCCTGCAGCCCGCCGCCAGCCC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGCCTGGGGCTGGTGGTaGTGGTGGTGCGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPAWGWW*WWCAGC
Trigger: GCACCCGGCGCACCACCAGCACCACCAGCCCCAGGC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGCCTGGGGCTGGTGGTaGTGGTGGTGCGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQAWGWW*WWCAGC
Trigger: GCACCCGGCGCACCACCAGCACCACCAGCCCCAGGC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCTGGCCGGCTGCTGGTaGGCGAGGTGCGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPLAGCW*ARCGWW
Trigger: CCACCACCCGCACCTCGCGCACCAGCAGCCGGCCAG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGGAGGCATGGGCTGCTaGCGCCGCTGGCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQGGMGC*RRWPAA
Trigger: AGCAGCCGGCCAGCGGCGGCAGCAGCCCATGCCTCC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAACCGGAGGCATGGGCTaGTGCCGCCGCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQTGGMG*CRRWPA
Trigger: AGCCGGCCAGCGGCGGCAGCAGCCCATGCCTCCGGT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCACCGGAGGCATGGGCTaGTGCCGCCGCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPTGGMG*CRRWPA
Trigger: AGCCGGCCAGCGGCGGCAGCAGCCCATGCCTCCGGT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATGCGGGTGGTGGTGGTaGTGCGAGAGCGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQCGWWW*CESGGP
Trigger: CGGGCCCCCGCTCTCGCACCACCACCACCACCCGCA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTGCGGGTGGTGGTGGTaGTGCGAGAGCGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPCGWWW*CESGGP
Trigger: CGGGCCCCCGCTCTCGCACCACCACCACCACCCGCA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGGGTGCGGGTGGTGGTaGTGGTGCGAGAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQGCGWW*WCESGG
Trigger: GCCCCCGCTCTCGCACCACCACCACCACCCGCACCC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGGGTGCGGGTGGTGGTaGTGGTGCGAGAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPGCGWW*WCESGG
Trigger: GCCCCCGCTCTCGCACCACCACCACCACCCGCACCC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGGCTGGTGGTGCTGGTaGTGCGCCGGGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQGWWCW*CAGCGW
Trigger: CCACCCGCACCCGGCGCACCACCAGCACCACCAGCC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGGCTGGTGGTGCTGGTaGTGCGCCGGGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPGWWCW*CAGCGW
Trigger: CCACCCGCACCCGGCGCACCACCAGCACCACCAGCC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACTCTCGCGGCGCGCCTaGGGCTGGTGGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQLSRRA*GWWCWW
Trigger: CCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAGGACCGCCGCCTCCTaGACGAGGACCGGGACCGCT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPRTAAS*TRTGTA
Trigger: AGCGGTCCCGGTCCTCGTCCAGGAGGCGGCGGTCCT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAGGACCGCCGCCTCCTaGACGAGGACCGGGACCGCT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQRTAAS*TRTGTA
Trigger: AGCGGTCCCGGTCCTCGTCCAGGAGGCGGCGGTCCT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATCAGCTCGCTCACATTaGGCTGGCTGCCCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQSARSH*AGCPGA
Trigger: CGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTCAGCTCGCTCACATTaGGCTGGCTGCCCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPSARSH*AGCPGA
Trigger: CGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCACGATCTCGGGGGCTaGGGACGAAACAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPHDLGG*GRNSGG
Trigger: GCCGCCGCTGTTTCGTCCTCAGCCCCCGAGATCGTG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACACGATCTCGGGGGCTaGGGACGAAACAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQHDLGG*GRNSGG
Trigger: GCCGCCGCTGTTTCGTCCTCAGCCCCCGAGATCGTG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGCCTTCTCCAGAACATaGGGGGATGGCGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQAFSRT*GDGAPG
Trigger: GCCGGGGGCGCCATCCCCTCATGTTCTGGAGAAGGC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACTGGCAATGCAGGTGTaGGGAGCGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSLAMQV*GARRRR
Trigger: CCGCCGCCGCCGCGCTCCTCACACCTGCATTGCCAG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGGCTGGCGGCGGGCTaGAGGCTGTGGCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGLAAG*RLWHWW
Trigger: CCACCAGTGCCACAGCCTGCAGCCCGCCGCCAGCCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGCCTGGGGCTGGTGGTaGTGGTGGTGCGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSAWGWW*WWCAGC
Trigger: GCACCCGGCGCACCACCAGCACCACCAGCCCCAGGC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGGGGGCTGCAGGGGCTaGGCCTCTGAGTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQGGCRG*ASESIS
Trigger: CGAGATGGACTCAGAGGCGCAGCCCCTGCAGCCCCC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGAGCCAGGCCCCCGCTaGCCACTCGCTGCTGATTGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPEPGPR*PLAADW
Trigger: CCAATCAGCAGCGAGTGGGCAGCGGGGGCCTGGCTC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAATTCCGTGCCTGCTTaGGGCCCGGGAGAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPNSVPA*GPGERP
Trigger: GGGGCGCTCTCCCGGGCCGCAAGCAGGCACGGAATT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGTCCCAGGGCTTCCTTaGCGGTGGAGAGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPVPGLP*RWRGRR
Trigger: CCGCCTGCCTCTCCACCGGCAAGGAAGCCCTGGGAC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACTGGCCGGCTGCTGGTaGGCGAGGTGCGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSELAGCW*ARCGWW
Trigger: CCACCACCCGCACCTCGCGCACCAGCAGCCGGCCAG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGAGGCATGGGCTGCTaGCGCCGCTGGCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGGMGC*RRWPAA
Trigger: AGCAGCCGGCCAGCGGCGGCAGCAGCCCATGCCTCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCGGAGCGCACTGGCATaGCTGGACGGCGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPRSALA*LDGVSS
Trigger: CGAGCTGACGCCGTCCAGCCATGCCAGTGCGCTCCG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGCTGCCGGAGCGCACTaGCATGGCTGGACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPAAGAH*HGWTAS
Trigger: TGACGCCGTCCAGCCATGCCAGTGCGCTCCGGCAGC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATGCGGGTGGTGGTGGTaGTGCGAGAGCGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSCGWWW*CESGGP
Trigger: CGGGCCCCCGCTCTCGCACCACCACCACCACCCGCA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGGTGCGGGTGGTGGTaGTGGTGCGAGAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGCGWW*WCESGG
Trigger: GCCCCCGCTCTCGCACCACCACCACCACCCGCACCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGGGTGCGGGTGGTGGTaGTGGTGCGAGAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEGCGWW*WCESGG
Trigger: GCCCCCGCTCTCGCACCACCACCACCACCCGCACCC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGGCTGGTGGTGCTGGTaGTGCGCCGGGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEGWWCW*CAGCGW
Trigger: CCACCCGCACCCGGCGCACCACCAGCACCACCAGCC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGCTGGTGGTGCTGGTaGTGCGCCGGGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGWWCW*CAGCGW
Trigger: CCACCCGCACCCGGCGCACCACCAGCACCACCAGCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACTCTCGCGGCGCGCCTaGGGCTGGTGGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSLSRRA*GWWCWW
Trigger: CCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACTCTCGCGGCGCGCCTaGGGCTGGTGGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSELSRRA*GWWCWW
Trigger: CCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGGGCTTCCTTGCCGGTaGAGAGGCAGGCGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPGLPCR*RGRRLA
Trigger: AGCGAGCCGCCTGCCTCTCCACCGGCAAGGAAGCCC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACCGGGTCCTGGGCTCTaGCGCTCAGGCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSPGPGL*RSGPPA
Trigger: TGCCGGAGGGCCTGAGCGCCAGAGCCCAGGACCCGG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCGGCGGCGGCTGCTCTaGGAAGAAGCCGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPRRRLL*EEAALE
Trigger: TTCCAGCGCGGCTTCTTCCCAGAGCAGCCGCCGCCG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAGGAGGCGCAGCTGTTaGACCGGAGGCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQRRRSC*TGGMGC
Trigger: GCAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAGGAGGCGCAGCTGTTaGACCGGAGGCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPRRRSC*TGGMGC
Trigger: GCAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATGCTGCGCGTACTGCTaGCGGAGCGCACTGGCATGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQCCAYC*RSALAW
Trigger: CCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGGGCGTCAAATTCCGTaGCTGCTTGCGGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPGRQIP*LLAARE
Trigger: CTCCCGGGCCGCAAGCAGGCACGGAATTTGACGCCC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTCGCTCACATTGAGCTaGCTGCCCCGGCGCGACGAG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPSLTLS*LPRRDE
Trigger: CTCGTCGCGCCGGGGCAGCCAGCTCAATGTGAGCGA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGCGCACTGGCATGGCTaGACGGCGTCAGCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQAHWHG*TASARS
Trigger: TGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGCGCACTGGCATGGCTaGACGGCGTCAGCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPAHWHG*TASARS
Trigger: TGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATGGCACTGGTGGTACTaGGAGGCGGACGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQWHWWY*EADADC
Trigger: GCAGTCGGCGTCCGCCTCCCAGTACCACCAGTGCCA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTGGCACTGGTGGTACTaGGAGGCGGACGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPWHWWY*EADADC
Trigger: GCAGTCGGCGTCCGCCTCCCAGTACCACCAGTGCCA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAGGCTGTGGCACTGGTaGTACTGGGAGGCGGACGCC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPRLWHW*YWEADA
Trigger: GGCGTCCGCCTCCCAGTACCACCAGTGCCACAGCCT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAGGCTGTGGCACTGGTaGTACTGGGAGGCGGACGCC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQRLWHW*YWEADA
Trigger: GGCGTCCGCCTCCCAGTACCACCAGTGCCACAGCCT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGCGGGCTGCAGGCTGTaGCACTGGTGGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPAGCRL*HWWYWE
Trigger: CTCCCAGTACCACCAGTGCCACAGCCTGCAGCCCGC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATGCGCCGGGTGCGGGTaGTGGTGGTGGTGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSCAGCG*WWWCES
Trigger: GCTCTCGCACCACCACCACCACCCGCACCCGGCGCA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATGCGCCGGGTGCGGGTaGTGGTGGTGGTGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSECAGCG*WWWCES
Trigger: GCTCTCGCACCACCACCACCACCCGCACCCGGCGCA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAGGACCGCCGCCTCCTaGACGAGGACCGGGACCGCT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSERTAAS*TRTGTA
Trigger: AGCGGTCCCGGTCCTCGTCCAGGAGGCGGCGGTCCT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAAGGACCGCCGCCTCCTaGACGAGGACCGGGACCGCT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSRTAAS*TRTGTA
Trigger: AGCGGTCCCGGTCCTCGTCCAGGAGGCGGCGGTCCT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGGGGACTCCTGCTGCTaGTGCGAGGAAGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQGDSCC*CEEGPM
Trigger: CATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGTTGCACCGGAGGCATaGGCTGCTGCCGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSVAPEA*AAAAAG
Trigger: GCCAGCGGCGGCAGCAGCCCATGCCTCCGGTGCAAC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGTTGCACCGGAGGCATaGGCTGCTGCCGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEVAPEA*AAAAAG
Trigger: GCCAGCGGCGGCAGCAGCCCATGCCTCCGGTGCAAC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATCAGCTCGCTCACATTaGGCTGGCTGCCCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSSARSH*AGCPGA
Trigger: CGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACAGGGGCTGCGCCTCTaGGTCCATCTCGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQQGLRL*VHLVQV
Trigger: AACCTGCACGAGATGGACTCAGAGGCGCAGCCCCTG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCAGGGGCTGCGCCTCTaGGTCCATCTCGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPQGLRL*VHLVQV
Trigger: AACCTGCACGAGATGGACTCAGAGGCGCAGCCCCTG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACACGATCTCGGGGGCTaGGGACGAAACAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSHDLGG*GRNSGG
Trigger: GCCGCCGCTGTTTCGTCCTCAGCCCCCGAGATCGTG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATCTGAGTCCATCTCGTaGAGGTTCCGGCGGGACGCG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQSESIS*RFRRDA
Trigger: CGCGTCCCGCCGGAACCTGCACGAGATGGACTCAGA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGGGGCTGCAGGGGCTaGGCCTCTGAGTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGGCRG*ASESIS
Trigger: CGAGATGGACTCAGAGGCGCAGCCCCTGCAGCCCCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGGGGGCTGCAGGGGCTaGGCCTCTGAGTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEGGCRG*ASESIS
Trigger: CGAGATGGACTCAGAGGCGCAGCCCCTGCAGCCCCC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCAGCTCCCACCTGGCTaGCCCTGCTTCGGTACTGAC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPQLPPG*PCFGTD
Trigger: GTCAGTACCGAAGCAGGGGCAGCCAGGTGGGAGCTG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGTCAAATTCCGTGCCTaGTTGCGGCCCGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPVKFRA*LRPGRA
Trigger: CGCTCTCCCGGGCCGCAAGCAGGCACGGAATTTGAC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACAAAGGTGTGGGGGCTaGTCAGCCACCGCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEQRCGG*SATAGL
Trigger: GAGGCCGGCGGTGGCTGAGCAGCCCCCACACCTTTG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAGCGGGGACTCCTGCTaGTGGTGCGAGGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSESGDSC*WCEEGP
Trigger: GGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGGAGCGGGGACTCCTaGTGCTGGTGCGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGSGDS*CWCEEG
Trigger: CCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGTGCACCCTGCGCAATaGGTTATGGTCGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPVHPAQ*VMVGSG
Trigger: CCCGCTCCCGACCATAACGCATTGCGCAGGGTGCAC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTGCTGCTGCTGGCAATaGAGGTGTGAGGAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPCCCWQ*RCEERG
Trigger: GCCGCGCTCCTCACACCTGCATTGCCAGCAGCAGCA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATGCTGCTGCTGGCAATaGAGGTGTGAGGAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQCCCWQ*RCEERG
Trigger: GCCGCGCTCCTCACACCTGCATTGCCAGCAGCAGCA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACGGAGCGCACTGGCATaGCTGGACGGCGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSERSALA*LDGVSS
Trigger: CGAGCTGACGCCGTCCAGCCATGCCAGTGCGCTCCG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGCTGCCGGAGCGCACTaGCATGGCTGGACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSAAGAH*HGWTAS
Trigger: TGACGCCGTCCAGCCATGCCAGTGCGCTCCGGCAGC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGCTGCCGGAGCGCACTaGCATGGCTGGACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEAAGAH*HGWTAS
Trigger: TGACGCCGTCCAGCCATGCCAGTGCGCTCCGGCAGC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTGCAGGCTGTGGCACTaGTGGTACTGGGAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPCRLWH*WYWEAD
Trigger: GTCCGCCTCCCAGTACCACCAGTGCCACAGCCTGCA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAGGGAGACCAAGCGGTaGTGCACCCTGCGCAATGCG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPRETKR*CTLRNA
Trigger: CGCATTGCGCAGGGTGCACCACCGCTTGGTCTCCCT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACGGCGGCGGCTGCTCTaGGAAGAAGCCGCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSERRRLL*EEAALE
Trigger: TTCCAGCGCGGCTTCTTCCCAGAGCAGCCGCCGCCG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGGGCACGGCTTGTCCTaGCTCTGTTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPGHGLS*LCCCCW
Trigger: CCAGCAGCAGCAACAGAGCCAGGACAAGCCGTGCCC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGGGCACGGCTTGTCCTaGCTCTGTTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQGHGLS*LCCCCW
Trigger: CCAGCAGCAGCAACAGAGCCAGGACAAGCCGTGCCC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAGGAGGCGCAGCTGTTaGACCGGAGGCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSERRRSC*TGGMGC
Trigger: GCAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAAGGAGGCGCAGCTGTTaGACCGGAGGCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSRRRSC*TGGMGC
Trigger: GCAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATGCTGCGCGTACTGCTaGCGGAGCGCACTGGCATGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSCCAYC*RSALAW
Trigger: CCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATGCTGCGCGTACTGCTaGCGGAGCGCACTGGCATGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSECCAYC*RSALAW
Trigger: CCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAGCGGTGGTGCACCCTaGGCAATGCGTTATGGTCGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPSGGAP*AMRYGR
Trigger: CCGACCATAACGCATTGCGCAGGGTGCACCACCGCT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATCGCTCACATTGAGCTaGCTGCCCCGGCGCGACGAG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSESLTLS*LPRRDE
Trigger: CTCGTCGCGCCGGGGCAGCCAGCTCAATGTGAGCGA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGCGCACTGGCATGGCTaGACGGCGTCAGCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEAHWHG*TASARS
Trigger: TGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATGGCACTGGTGGTACTaGGAGGCGGACGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEWHWWY*EADADC
Trigger: GCAGTCGGCGTCCGCCTCCCAGTACCACCAGTGCCA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATGGCACTGGTGGTACTaGGAGGCGGACGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSWHWWY*EADADC
Trigger: GCAGTCGGCGTCCGCCTCCCAGTACCACCAGTGCCA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAAGGCTGTGGCACTGGTaGTACTGGGAGGCGGACGCC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSRLWHW*YWEADA
Trigger: GGCGTCCGCCTCCCAGTACCACCAGTGCCACAGCCT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGCGGGCTGCAGGCTGTaGCACTGGTGGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEAGCRL*HWWYWE
Trigger: CTCCCAGTACCACCAGTGCCACAGCCTGCAGCCCGC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGCGGGCTGCAGGCTGTaGCACTGGTGGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSAGCRL*HWWYWE
Trigger: CTCCCAGTACCACCAGTGCCACAGCCTGCAGCCCGC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAAGTTGGTGGTGCTGTaGAAGAGGACCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQKLVVL*KRTAAS
Trigger: GGAGGCGGCGGTCCTCTTCCACAGCACCACCAACTT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAAGTTGGTGGTGCTGTaGAAGAGGACCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPKLVVL*KRTAAS
Trigger: GGAGGCGGCGGTCCTCTTCCACAGCACCACCAACTT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACTCCCTGTGGGCTCGTaGGCTCGCTGGCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSELPVGS*ARWLQE
Trigger: CTCCTGAAGCCAGCGAGCCCACGAGCCCACAGGGAG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503706.5
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGCTCGCTCAAAGGTGTaGGGGCTGCTCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSARSKV*GLLSHR
Trigger: GCGGTGGCTGAGCAGCCCCCACACCTTTGAGCGAGC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATCATGGCTATTTCGGTaGAGGGGTTGCTCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQSWLFR*RGCSRG
Trigger: GCCGCGAGAGCAACCCCTTCACCGAAATAGCCATGA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACAGGGGCTGCGCCTCTaGGTCCATCTCGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSQGLRL*VHLVQV
Trigger: AACCTGCACGAGATGGACTCAGAGGCGCAGCCCCTG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACAGGGGCTGCGCCTCTaGGTCCATCTCGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEQGLRL*VHLVQV
Trigger: AACCTGCACGAGATGGACTCAGAGGCGCAGCCCCTG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACTGCCCACTCGCTGCTaGTTGGGGTCCAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQLPTRC*LGSNFW
Trigger: CCAAAAGTTGGACCCCAATCAGCAGCGAGTGGGCAG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATCTGAGTCCATCTCGTaGAGGTTCCGGCGGGACGCG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSESESIS*RFRRDA
Trigger: CGCGTCCCGCCGGAACCTGCACGAGATGGACTCAGA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATGCAGGCTGTGGCACTaGTGGTACTGGGAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSCRLWH*WYWEAD
Trigger: GTCCGCCTCCCAGTACCACCAGTGCCACAGCCTGCA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATGCAGGCTGTGGCACTaGTGGTACTGGGAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSECRLWH*WYWEAD
Trigger: GTCCGCCTCCCAGTACCACCAGTGCCACAGCCTGCA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATGCTGCCTGATGGTCTaGCTTATGAGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQCCLMV*LMSPGR
Trigger: CCTCCCTGGGCTCATAAGCCAGACCATCAGGCAGCA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTGCTGCCTGATGGTCTaGCTTATGAGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPCCLMV*LMSPGR
Trigger: CCTCCCTGGGCTCATAAGCCAGACCATCAGGCAGCA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACCACTCGCTGCTGATTaGGGTCCAACTTTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQPLAAD*GPTFGR
Trigger: GCGCCCAAAAGTTGGACCCCAATCAGCAGCGAGTGG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAAGGGAGACCAAGCGGTaGTGCACCCTGCGCAATGCG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSRETKR*CTLRNA
Trigger: CGCATTGCGCAGGGTGCACCACCGCTTGGTCTCCCT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACCCGGACCCTGGCGGTaGGTGTTACAGCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSPGPWR*VLQLLR
Trigger: CCTTAAGAGCTGTAACACTCACCGCCAGGGTCCGGG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503706.5
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACGCCCCCGTTGTACCTaGAGCTGCTCATGGCTATTT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQRPRCT*SCSWLF
Trigger: AAATAGCCATGAGCAGCTGCAGGTACAACGGGGGCG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCACCTGGCTGCCCCTaGTTCGGTACTGACTGTGCT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEPPGCP*FGTDCA
Trigger: AGCACAGTCAGTACCGAAGCAGGGGCAGCCAGGTGG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACCGCCGGCCTCCAGCTaGTCTTCTGCTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSPPASS*SSASLP
Trigger: AGGAAGAGAAGCAGAAGAGCAGCTGGAGGCCGGCGG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAGCGGTGGTGCACCCTaGGCAATGCGTTATGGTCGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSESGGAP*AMRYGR
Trigger: CCGACCATAACGCATTGCGCAGGGTGCACCACCGCT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATGGCTCTGTTGCTGCTaGTGGCAATGCAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQWLCCC*WQCRCE
Trigger: CTCACACCTGCATTGCCAGCAGCAGCAACAGAGCCA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTGGCTCTGTTGCTGCTaGTGGCAATGCAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPWLCCC*WQCRCE
Trigger: CTCACACCTGCATTGCCAGCAGCAGCAACAGAGCCA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTTGTCCTGGCTCTGTTaGTGCTGCTGGCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPLSWLC*CCWQCR
Trigger: CCTGCATTGCCAGCAGCAGCAACAGAGCCAGGACAA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAGAGCGCCAGGTTGTTaGAGTTGTTGTGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQRAPGC*SCCARA
Trigger: AGCCCGAGCACAACAACTCCAACAACCTGGCGCTCT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAGCGGTGGTTGTGGATaGGGCATAGGAGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQSGGCG*GIGEGK
Trigger: CTTGCCTTCTCCTATGCCCCATCCACAACCACCGCT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAGCGGTGGTTGTGGATaGGGCATAGGAGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPSGGCG*GIGEGK
Trigger: CTTGCCTTCTCCTATGCCCCATCCACAACCACCGCT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCATCAGCGGTGGTTGTaGATGGGGCATAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPHQRWL*MGHRRR
Trigger: CCTTCTCCTATGCCCCATCCACAACCACCGCTGATG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAAGTTGGTGGTGCTGTaGAAGAGGACCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEKLVVL*KRTAAS
Trigger: GGAGGCGGCGGTCCTCTTCCACAGCACCACCAACTT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAAAGTTGGTGGTGCTGTaGAAGAGGACCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSKLVVL*KRTAAS
Trigger: GGAGGCGGCGGTCCTCTTCCACAGCACCACCAACTT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGTTTCTTCCTTCTGGTaGGTTCCTGGTCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPVSSFW*VPGLAG
Trigger: GCCAGCGAGACCAGGAACCCACCAGAAGGAAGAAAC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503706.5
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATTGGGGTCCAACTTTTaGGCGCCCAGCTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSELGSNF*APSSHL
Trigger: CAGGTGGGAGCTGGGCGCCCAAAAGTTGGACCCCAA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGCGAGTCCGATTGGTTaGGCGCACCAAAACAATGGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQASPIG*AHQNNG
Trigger: CCCATTGTTTTGGTGCGCCCAACCAATCGGACTCGC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACTGCGCAATGCGTTATaGTCGGGAGCGGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSELRNAL*SGAGTP
Trigger: AGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGCGCTGGAACTGCAATaGGGTTTCCATGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPALELQ*GFHVRA
Trigger: AGCCCTGACATGGAAACCCCATTGCAGTTCCAGCGC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACTCTGTTGCTGCTGCTaGCAATGCAGGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQLCCCC*QCRCEE
Trigger: CTCCTCACACCTGCATTGCCAGCAGCAGCAACAGAG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCTCTGTTGCTGCTGCTaGCAATGCAGGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPLCCCC*QCRCEE
Trigger: CTCCTCACACCTGCATTGCCAGCAGCAGCAACAGAG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATCATGGCTATTTCGGTaGAGGGGTTGCTCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSESWLFR*RGCSRG
Trigger: GCCGCGAGAGCAACCCCTTCACCGAAATAGCCATGA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGCCGGGCCGTCCATGTaGATGTATAATTCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPAGPSM*MYNSQV
Trigger: TACCTGGGAATTATACATTCACATGGACGGCCCGGC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGACTGTGCTAAATATTaGACCGAATCCCAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPDCAKY*TESQAP
Trigger: GGGCGCCTGGGATTCGGTTCAATATTTAGCACAGTC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGCCAGTGGACAAAGCTaGAGATCGAGTCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQASGQS*RSSPLR
Trigger: TCTCAGTGGACTCGATCTTCAGCTTTGTCCACTGGC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCCTCAAAGCGGTAAATaGGGCCTTGGTGAAATGCGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPPQSGK*GLGEMR
Trigger: GCGCATTTCACCAAGGCCGCATTTACCGCTTTGAGG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAGACCAAGCGGTGGTaGACCCTGCGCAATGCGTTA +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSETKRW*TLRNAL
Trigger: TAACGCATTGCGCAGGGTGCACCACCGCTTGGTCTC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAAGCCGCGCTGGAACTaGAATGGGGTTTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPKPRWN*NGVSMS
Trigger: TGACATGGAAACCCCATTGCAGTTCCAGCGCGGCTT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATCTTTTTGCTGGACTTaGTGCCACTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQSFCWT*CHCCCR
Trigger: ACGGCAGCAGCAGTGGCACCAAGTCCAGCAAAAAGA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTCTTTTTGCTGGACTTaGTGCCACTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPSFCWT*CHCCCR
Trigger: ACGGCAGCAGCAGTGGCACCAAGTCCAGCAAAAAGA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATATCCACATCAGCGGTaGTTGTGGATGGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQYPHQR*LWMGHR
Trigger: CCTATGCCCCATCCACAACCACCGCTGATGTGGATA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTATCCACATCAGCGGTaGTTGTGGATGGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPYPHQR*LWMGHR
Trigger: CCTATGCCCCATCCACAACCACCGCTGATGTGGATA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATGCTGCCTGATGGTCTaGCTTATGAGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSCCLMV*LMSPGR
Trigger: CCTCCCTGGGCTCATAAGCCAGACCATCAGGCAGCA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATGCTGCCTGATGGTCTaGCTTATGAGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSECCLMV*LMSPGR
Trigger: CCTCCCTGGGCTCATAAGCCAGACCATCAGGCAGCA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACTTCTGGTGGGTTCCTaGTCTCGCTGGCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSELLVGS*SRWLRS
Trigger: ACTCCTGAGCCAGCGAGACCAGGAACCCACCAGAAG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503706.5
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGCGGCGAGTCCGATTaGTTGGGCGCACCAAAACAA +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGGESD*LGAPKQ
Trigger: TTGTTTTGGTGCGCCCAACCAATCGGACTCGCCGCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGGGAAGAAGCCGCGCTaGAACTGCAATGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEGKKPR*NCNGVS
Trigger: GGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCCC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGGAAGAAGCCGCGCTaGAACTGCAATGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGKKPR*NCNGVS
Trigger: GGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGCTCAGCATTGTAAGTaGCGTGCTTGTCGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPAQHCK*RACRSS
Trigger: AGAGCTACGACAAGCACGTCACTTACAATGCTGAGC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGCTCAGCATTGTAAGTaGCGTGCTTGTCGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQAQHCK*RACRSS
Trigger: AGAGCTACGACAAGCACGTCACTTACAATGCTGAGC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAGGTTCCCAGGATTCTaGCATCAGAACCCGGATAAC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQRFPGF*HQNPDN
Trigger: GTTATCCGGGTTCTGATGTCAGAATCCTGGGAACCT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACTAGTAACATCCTGTTaGTCATGGTACTGCGTCCGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQLVTSC*SWYCVR
Trigger: CCGGACGCAGTACCATGATCAACAGGATGTTACTAG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503706.5
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACGCCCCCGTTGTACCTaGAGCTGCTCATGGCTATTT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSERPRCT*SCSWLF
Trigger: AAATAGCCATGAGCAGCTGCAGGTACAACGGGGGCG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCAGGGAGGGCGTGGATaGTACCAATCAAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPQGGRG*YQSKSL
Trigger: TAGAGACTTTGATTGGTAGCATCCACGCCCTCCCTG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACAGGGAGGGCGTGGATaGTACCAATCAAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQQGGRG*YQSKSL
Trigger: TAGAGACTTTGATTGGTAGCATCCACGCCCTCCCTG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACTAGCCAGGACCATCTaGCTCTCGGGCGTCAAATTC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSELARTI*LSGVKF
Trigger: GAATTTGACGCCCGAGAGGCAGATGGTCCTGGCTAG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGCAAGAATCTCGTTCTaGAACCAGGAGTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEARISF*NQESRS
Trigger: GGAGCGGGACTCCTGGTTGCAGAACGAGATTCTTGC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATTGTCCTGGCTCTGTTaGTGCTGCTGGCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSELSWLC*CCWQCR
Trigger: CCTGCATTGCCAGCAGCAGCAACAGAGCCAGGACAA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAGAGCGCCAGGTTGTTaGAGTTGTTGTGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSERAPGC*SCCARA
Trigger: AGCCCGAGCACAACAACTCCAACAACCTGGCGCTCT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAAGAGCGCCAGGTTGTTaGAGTTGTTGTGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSRAPGC*SCCARA
Trigger: AGCCCGAGCACAACAACTCCAACAACCTGGCGCTCT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATGTATTTCCCTGGCGTaGTACACGATGATCAGACCG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQCISLA*YTMIRP
Trigger: CGGTCTGATCATCGTGTACCACGCCAGGGAAATACA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTGTATTTCCCTGGCGTaGTACACGATGATCAGACCG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPCISLA*YTMIRP
Trigger: CGGTCTGATCATCGTGTACCACGCCAGGGAAATACA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAGCGGTGGTTGTGGATaGGGCATAGGAGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSESGGCG*GIGEGK
Trigger: CTTGCCTTCTCCTATGCCCCATCCACAACCACCGCT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACATCAGCGGTGGTTGTaGATGGGGCATAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSHQRWL*MGHRRR
Trigger: CCTTCTCCTATGCCCCATCCACAACCACCGCTGATG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACATCAGCGGTGGTTGTaGATGGGGCATAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEHQRWL*MGHRRR
Trigger: CCTTCTCCTATGCCCCATCCACAACCACCGCTGATG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGCGCTGGAACTGCAATaGGGTTTCCATGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEALELQ*GFHVRA
Trigger: AGCCCTGACATGGAAACCCCATTGCAGTTCCAGCGC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCTCCATTGTCCACCATaGACAACTGTATTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPLHCPP*TTVFPW
Trigger: CCAGGGAAATACAGTTGTTCATGGTGGACAATGGAG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGCCGGGCCGTCCATGTaGATGTATAATTCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSAGPSM*MYNSQV
Trigger: TACCTGGGAATTATACATTCACATGGACGGCCCGGC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGATCGAGTCCACTaGGAATTCCGGCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSEDRVH*EFRQVH
Trigger: GTGAACCTGCCGGAATTCTCAGTGGACTCGATCTTC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCCAAAACAATGGGCATaGCATCACATTTGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPPKQWA*HHICAF
Trigger: GAAGGCGCAAATGTGATGTCATGCCCATTGTTTTGG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAAATCTCTCTGCTGCTaGCTGATGGTCTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQKSLCC*LMVWLM
Trigger: CATAAGCCAGACCATCAGGCAGCAGCAGAGAGATTT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAAATCTCTCTGCTGCTaGCTGATGGTCTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPKSLCC*LMVWLM
Trigger: CATAAGCCAGACCATCAGGCAGCAGCAGAGAGATTT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCATGAAATCTCTCTGCTaGTGCCTGATGGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPMKSLC*CLMVWL
Trigger: AAGCCAGACCATCAGGCAGCAGCAGAGAGATTTCAT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAATGAAATCTCTCTGCTaGTGCCTGATGGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQMKSLC*CLMVWL
Trigger: AAGCCAGACCATCAGGCAGCAGCAGAGAGATTTCAT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATCAATGAAATCTCTCTaGTGCTGCCTGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQSMKSL*CCLMVW
Trigger: CCAGACCATCAGGCAGCAGCAGAGAGATTTCATTGA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTCAATGAAATCTCTCTaGTGCTGCCTGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPSMKSL*CCLMVW
Trigger: CCAGACCATCAGGCAGCAGCAGAGAGATTTCATTGA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATCTTTTTGCTGGACTTaGTGCCACTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSSFCWT*CHCCCR
Trigger: ACGGCAGCAGCAGTGGCACCAAGTCCAGCAAAAAGA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATCTTTTTGCTGGACTTaGTGCCACTGCTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSESFCWT*CHCCCR
Trigger: ACGGCAGCAGCAGTGGCACCAAGTCCAGCAAAAAGA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGGTTTTTCTTTTTGCTaGACTTGGTGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPGFSFC*TWCHCC
Trigger: GCAGCAGTGGCACCAAGTCCAGCAAAAAGAAAAACC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGGTTTTTCTTTTTGCTaGACTTGGTGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQGFSFC*TWCHCC
Trigger: GCAGCAGTGGCACCAAGTCCAGCAAAAAGAAAAACC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATATCCACATCAGCGGTaGTTGTGGATGGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEYPHQR*LWMGHR
Trigger: CCTATGCCCCATCCACAACCACCGCTGATGTGGATA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGAGTTTCTTCCTTCTaGTGGGTTCCTGGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGVSSF*WVPGLA
Trigger: AGCGAGACCAGGAACCCACCAGAAGGAAGAAACTCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503706.5
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATGCGTCCGGAATTGGTaGGTTCTTGGTCTCACTGAC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSCVRNW*VLGLTD
Trigger: GTCAGTGAGACCAAGAACCCACCAATTCCGGACGCA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503706.5
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTTCCCAGGTATGGGATaGATAGCACACACCAGTATT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPFPGMG*IAHTSI
Trigger: AATACTGGTGTGTGCTATTCATCCCATACCTGGGAA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATTCCCAGGTATGGGATaGATAGCACACACCAGTATT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQFPGMG*IAHTSI
Trigger: AATACTGGTGTGTGCTATTCATCCCATACCTGGGAA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGCTCAGCATTGTAAGTaGCGTGCTTGTCGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEAQHCK*RACRSS
Trigger: AGAGCTACGACAAGCACGTCACTTACAATGCTGAGC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGCTCAGCATTGTAAGTaGCGTGCTTGTCGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSAQHCK*RACRSS
Trigger: AGAGCTACGACAAGCACGTCACTTACAATGCTGAGC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAGGTTCCCAGGATTCTaGCATCAGAACCCGGATAAC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSERFPGF*HQNPDN
Trigger: GTTATCCGGGTTCTGATGTCAGAATCCTGGGAACCT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAAGGTTCCCAGGATTCTaGCATCAGAACCCGGATAAC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSRFPGF*HQNPDN
Trigger: GTTATCCGGGTTCTGATGTCAGAATCCTGGGAACCT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGATGTTCTGGGTCTTTaGCAAGTCCACCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQDVLGL*QVHQSV
Trigger: AACACTTTGGTGGACTTGGCAAAGACCCAGAACATC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACAGGGAGGGCGTGGATaGTACCAATCAAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEQGGRG*YQSKSL
Trigger: TAGAGACTTTGATTGGTAGCATCCACGCCCTCCCTG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATGTATTTCCCTGGCGTaGTACACGATGATCAGACCG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSCISLA*YTMIRP
Trigger: CGGTCTGATCATCGTGTACCACGCCAGGGAAATACA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATCATACATGATGTTCTaGGTCTTTGCCAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQSYMMF*VFAKST
Trigger: GGTGGACTTGGCAAAGACCCAGAACATCATGTATGA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGTGAAATGCGCCAGTaGACAAAGCTGAAGATCGAG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGEMRQ*TKLKIE
Trigger: CTCGATCTTCAGCTTTGTCCACTGGCGCATTTCACC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACTCCATTGTCCACCATaGACAACTGTATTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSELHCPP*TTVFPW
Trigger: CCAGGGAAATACAGTTGTTCATGGTGGACAATGGAG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACTCCATTGTCCACCATaGACAACTGTATTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSLHCPP*TTVFPW
Trigger: CCAGGGAAATACAGTTGTTCATGGTGGACAATGGAG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGGAGAGAAAAGTTATTaGTATCAACCACATCGCTCC +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQGEKSY*YQPHRS
Trigger: GGAGCGATGTGGTTGATATCAATAACTTTTCTCTCC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAGTCCCGCTCCATTTaGAGCTCAAATTTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSESRSI*SSNLPQ
Trigger: TTGAGGCAAATTTGAGCTTCAAATGGAGCGGGACTC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATATTCTCCAGTCATCTaGTCCATTGTCCACCATGAA +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQYSPVI*SIVHHE
Trigger: TTCATGGTGGACAATGGAGCAGATGACTGGAGAATA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTATTCTCCAGTCATCTaGTCCATTGTCCACCATGAA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPYSPVI*SIVHHE
Trigger: TTCATGGTGGACAATGGAGCAGATGACTGGAGAATA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGTCCACCAAAGTGTTTaGTTGGTCATTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQVHQSV*LVIQFP
Trigger: AGGAAACTGAATGACCAAGCAAACACTTTGGTGGAC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAAATCTCTCTGCTGCTaGCTGATGGTCTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEKSLCC*LMVWLM
Trigger: CATAAGCCAGACCATCAGGCAGCAGCAGAGAGATTT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAATGAAATCTCTCTGCTaGTGCCTGATGGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSMKSLC*CLMVWL
Trigger: AAGCCAGACCATCAGGCAGCAGCAGAGAGATTTCAT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATCAATGAAATCTCTCTaGTGCTGCCTGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSSMKSL*CCLMVW
Trigger: CCAGACCATCAGGCAGCAGCAGAGAGATTTCATTGA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATCAATGAAATCTCTCTaGTGCTGCCTGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSESMKSL*CCLMVW
Trigger: CCAGACCATCAGGCAGCAGCAGAGAGATTTCATTGA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACAGCTCTTAAGGCGGTaGATCTGGAGTTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEQLLRR*IWSCSF
Trigger: GAATGAACAACTCCAGATGCACCGCCTTAAGAGCTG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503706.5
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCCTCCTCACTGTTATTaGTTATATCCCACTCCATTC +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPPPHCY*LYPTPF
Trigger: GAATGGAGTGGGATATAAGCAATAACAGTGAGGAGG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGTTTTTCTTTTTGCTaGACTTGGTGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGFSFC*TWCHCC
Trigger: GCAGCAGTGGCACCAAGTCCAGCAAAAAGAAAAACC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATACGCTCATAAGTCATaGCTATTCTCCAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQYAHKS*LFSSHL
Trigger: CAGATGACTGGAGAATAGCCATGACTTATGAGCGTA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATTCCCAGGTATGGGATaGATAGCACACACCAGTATT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEFPGMG*IAHTSI
Trigger: AATACTGGTGTGTGCTATTCATCCCATACCTGGGAA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATGCTATGTAAAAGCATaGCTCTGGCAATCAGATAGA +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQCYVKA*LWQSDR
Trigger: TCTATCTGATTGCCAGAGTCATGCTTTTACATAGCA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTGCTATGTAAAAGCATaGCTCTGGCAATCAGATAGA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPCYVKA*LWQSDR
Trigger: TCTATCTGATTGCCAGAGTCATGCTTTTACATAGCA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGATGTTCTGGGTCTTTaGCAAGTCCACCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSDVLGL*QVHQSV
Trigger: AACACTTTGGTGGACTTGGCAAAGACCCAGAACATC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGATGTTCTGGGTCTTTaGCAAGTCCACCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEDVLGL*QVHQSV
Trigger: AACACTTTGGTGGACTTGGCAAAGACCCAGAACATC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATCATACATGATGTTCTaGGTCTTTGCCAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSSYMMF*VFAKST
Trigger: GGTGGACTTGGCAAAGACCCAGAACATCATGTATGA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACATTTTTCCTCTTGCTaGAGTCCATCCTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQHFSSC*SPSFCS
Trigger: ACTACAAAAGGATGGACTCCAGCAAGAGGAAAAATG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR TCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGTATTTCCAAGCAGATaGAGAAAATACGCTCATAAG +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQVFPSR*RKYAHK
Trigger: CTTATGAGCGTATTTTCTTCATCTGCTTGGAAATAC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGGAGAGAAAAGTTATTaGTATCAACCACATCGCTCC +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEGEKSY*YQPHRS
Trigger: GGAGCGATGTGGTTGATATCAATAACTTTTCTCTCC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGGAGAGAAAAGTTATTaGTATCAACCACATCGCTCC +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSGEKSY*YQPHRS
Trigger: GGAGCGATGTGGTTGATATCAATAACTTTTCTCTCC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCACTCTTTTAGTCAGCTaGGTATCCATCATGAAATTG +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPTLLVS*VSIMKL
Trigger: CAATTTCATGATGGATACTCAGCTGACTAAAAGAGT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAAATCATATCATACATaGTGTTCTGGGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPKSYHT*CSGSLP
Trigger: TGGCAAAGACCCAGAACATCATGTATGATATGATTT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATATTCTCCAGTCATCTaGTCCATTGTCCACCATGAA +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEYSPVI*SIVHHE
Trigger: TTCATGGTGGACAATGGAGCAGATGACTGGAGAATA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATATTCTCCAGTCATCTaGTCCATTGTCCACCATGAA +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSYSPVI*SIVHHE
Trigger: TTCATGGTGGACAATGGAGCAGATGACTGGAGAATA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGTCCACCAAAGTGTTTaGTTGGTCATTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEVHQSV*LVIQFP
Trigger: AGGAAACTGAATGACCAAGCAAACACTTTGGTGGAC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGTCCACCAAAGTGTTTaGTTGGTCATTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSVHQSV*LVIQFP
Trigger: AGGAAACTGAATGACCAAGCAAACACTTTGGTGGAC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTATAGCAATAATAGGTaGATTCCCTGTGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPYSNNR*IPCASE
Trigger: TTCAGATGCACAGGGAATGCACCTATTATTGCTATA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATACGCTCATAAGTCATaGCTATTCTCCAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEYAHKS*LFSSHL
Trigger: CAGATGACTGGAGAATAGCCATGACTTATGAGCGTA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATGCTATGTAAAAGCATaGCTCTGGCAATCAGATAGA +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSECYVKA*LWQSDR
Trigger: TCTATCTGATTGCCAGAGTCATGCTTTTACATAGCA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTCATTCAGTTTCCTCTaGTCCATTTTTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPSFSFL*SIFTLL
Trigger: AAGAAGTGTAAAAATGGAGCAGAGGAAACTGAATGA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATCATTCAGTTTCCTCTaGTCCATTTTTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: DSDIRTRITLIRTIGALQSFSFL*SIFTLL
Trigger: AAGAAGTGTAAAAATGGAGCAGAGGAAACTGAATGA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATTTGAAGCTCAAATTTaGCTCAAAGCGGTAAATGCG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSFEAQI*LKAVNA
Trigger: CGCATTTACCGCTTTGAGGCAAATTTGAGCTTCAAA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGTATTTCCAAGCAGATaGAGAAAATACGCTCATAAG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSVFPSR*RKYAHK
Trigger: CTTATGAGCGTATTTTCTTCATCTGCTTGGAAATAC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGTATTTCCAAGCAGATaGAGAAAATACGCTCATAAG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEVFPSR*RKYAHK
Trigger: CTTATGAGCGTATTTTCTTCATCTGCTTGGAAATAC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAACTCTTTTAGTCAGCTaGGTATCCATCATGAAATTG +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSTLLVS*VSIMKL
Trigger: CAATTTCATGATGGATACTCAGCTGACTAAAAGAGT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAACTCTTTTAGTCAGCTaGGTATCCATCATGAAATTG +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSETLLVS*VSIMKL
Trigger: CAATTTCATGATGGATACTCAGCTGACTAAAAGAGT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAAATCATATCATACATaGTGTTCTGGGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEKSYHT*CSGSLP
Trigger: TGGCAAAGACCCAGAACATCATGTATGATATGATTT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR TCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAAAATCATATCATACATaGTGTTCTGGGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSKSYHT*CSGSLP
Trigger: TGGCAAAGACCCAGAACATCATGTATGATATGATTT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATATAGCAATAATAGGTaGATTCCCTGTGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSEYSNNR*IPCASE
Trigger: TTCAGATGCACAGGGAATGCACCTATTATTGCTATA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATATAGCAATAATAGGTaGATTCCCTGTGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSYSNNR*IPCASE
Trigger: TTCAGATGCACAGGGAATGCACCTATTATTGCTATA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAATTCATTTTTCCTCTTaGTGGAGTCCATCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSIHFSS*WSPSFC
Trigger: ACAAAAGGATGGACTCCAGCAAGAGGAAAAATGAAT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR GCA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATCATTCAGTTTCCTCTaGTCCATTTTTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: THFGLKLSVQVPRILTSESFSFL*SIFTLL
Trigger: AAGAAGTGTAAAAATGGAGCAGAGGAAACTGAATGA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR GCA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATCATTCAGTTTCCTCTaGTCCATTTTTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSSFSFL*SIFTLL
Trigger: AAGAAGTGTAAAAATGGAGCAGAGGAAACTGAATGA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS CCA 90 bp CGGCGCGCCTGGGGCTGGTGGTGCTGGTGGTGCGCCGGGTGCGGGTaGTGGTGGTGGTGCGAGAGCGGGGGCCCGGAGCCCAGACTGCCG +
Preference number: 5 (lower is better)
Translates to: RRAWGWWCWWCAGCG*WWWCESGGPEPRLP
Trigger: CGGCAGTCTGGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCGCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS TCA 90 bp CTGCCGCCGCTGGCCGGCTGCTGGTGCGCGAGGTGCGGGTGGTGGTaGGGGTGCGGGAGGGGCGCGAAGGGCGGGCACGGCTTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPPLAGCWCARCGWW*GCGRGAKGGHGLSW
Trigger: CCAGGACAAGCCGTGCCCGCCCTTCGCGCCCCTCCCGCACCCTCACCACCACCCGCACCTCGCGCACCAGCAGCCGGCCAGCGGCGGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS CCA 90 bp CGCGCCTGGGGCTGGTGGTGCTGGTGGTGCGCCGGGTGCGGGTGGTaGTGGTGGTGCGAGAGCGGGGGCCCGGAGCCCAGACTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RAWGWWCWWCAGCGW*WWCESGGPEPRLPR
Trigger: CCTCGGCAGTCTGGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp GGCTGGTGGTGCTGGTGGTGCGCCGGGTGCGGGTGGTGGTGGTGGTaGGAGAGCGGGGGCCCGGAGCCCAGACTGCCGAGGCTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GWWCWWCAGCGWWWW*ESGGPEPRLPRLPV
Trigger: CACGGGCAGCCTCGGCAGTCTGGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp CCGGGGCACCGGAGGAGGCGCAGCTGTTGCACCGGAGGCATGGGCTaGTGCCGCCGCTGGCCGGCTGCTGGTGCGCGAGGTGCGGGTGGT +
Preference number: 5 (lower is better)
Translates to: PGHRRRRSCCTGGMG*CRRWPAAGARGAGG
Trigger: ACCACCCGCACCTCGCGCACCAGCAGCCGGCCAGCGGCGGCAGCAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCTCCGGTGCCCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS CCA 90 bp TGGGGCTGGTGGTGCTGGTGGTGCGCCGGGTGCGGGTGGTGGTGGTaGTGCGAGAGCGGGGGCCCGGAGCCCAGACTGCCGAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: WGWWCWWCAGCGWWW*CESGGPEPRLPRLP
Trigger: GGGCAGCCTCGGCAGTCTGGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 90 bp GCCTGGGGCTGGTGGTGCTGGTGGTGCGCCGGGTGCGGGTGGTGGTaGTGGTGCGAGAGCGGGGGCCCGGAGCCCAGACTGCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: AWGWWCWWCAGCGWW*WCESGGPEPRLPRL
Trigger: CAGCCTCGGCAGTCTGGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp GGGCACCGGAGGAGGCGCAGCTGTTGCACCGGAGGCATGGGCTGCTaGCGCCGCTGGCCGGCTGCTGGTGCGCGAGGTGCGGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: GHRRRRSCCTGGMGC*RRWPAAGARGAGGG
Trigger: ACCACCACCCGCACCTCGCGCACCAGCAGCCGGCCAGCGGCGGCAGCAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCTCCGGTGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS CCA 90 bp CAGAACATGAGGGGATGGCGCCCCCGGCCGCCGGGTCCTGGGCTCTaGCGCTCAGGCCCTCCGGCAGCCCGAATCCGGAGGTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QNMRGWRPRPPGPGL*RSGPPAARIRRSQG
Trigger: GCCCTGGGACCTCCGGATTCGGGCTGCCGGAGGGCCTGAGCGCCAGAGCCCAGGACCCGGCGGCCGGGGGCGCCATCCCCTCATGTTCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 90 bp CCCGTGGGGCTGGCGGCGGGCTGCAGGCTGTGGCACTGGTGGTACTaGGAGGCGGACGCCGACTGCTGCGCGGACTGCTGCGCGTACTGC +
Preference number: 5 (lower is better)
Translates to: PVGLAAGCRLWHWWY*EADADCCADCCAYC
Trigger: GCAGTACGCGCAGCAGTCCGCGCAGCAGTCGGCGTCCGCCTCCCAGTACCACCAGTGCCACAGCCTGCAGCCCGCCGCCAGCCCCACGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 90 bp TCGGTGAAGGGGTTGCTCTCGCGGCGCGCCTGGGGCTGGTGGTGCTaGTGGTGCGCCGGGTGCGGGTGGTGGTGGTGGTGCGAGAGCGGG +
Preference number: 5 (lower is better)
Translates to: SVKGLLSRRAWGWWC*WCAGCGWWWWCESG
Trigger: CCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAGCAACCCCTTCACCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp AGGGGCGCGAAGGGCGGGCACGGCTTGTCCTGGCTCTGTTGCTGCTaGTGGCAATGCAGGTGTGAGGAGCGCGGCGGCGGCGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: RGAKGGHGLSWLCCC*WQCRCEERGGGGGC
Trigger: GCAGCCGCCGCCGCCGCCGCGCTCCTCACACCTGCATTGCCAGCAGCAGCAACAGAGCCAGGACAAGCCGTGCCCGCCCTTCGCGCCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS CCA 90 bp CCTTCTCCAGAACATGAGGGGATGGCGCCCCCGGCCGCCGGGTCCTaGGCTCTGGCGCTCAGGCCCTCCGGCAGCCCGAATCCGGAGGTC +
Preference number: 5 (lower is better)
Translates to: PSPEHEGMAPPAAGS*ALALRPSGSPNPEV
Trigger: GACCTCCGGATTCGGGCTGCCGGAGGGCCTGAGCGCCAGAGCCCAGGACCCGGCGGCCGGGGGCGCCATCCCCTCATGTTCTGGAGAAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 90 bp TGCTGCTGCCGTGCCCGCTCCCGCCACCGCCGCCGCCTCCTCCAGTaGTGCCTCCGCCGCCGGTTCCATAGAGCGCCAGGTTGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: CCCRARSRHRRRLLQ*CLRRRFHRAPGCWS
Trigger: ACTCCAACAACCTGGCGCTCTATGGAACCGGCGGCGGAGGCAGCACTGGAGGAGGCGGCGGCGGTGGCGGGAGCGGGCACGGCAGCAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS TCA 90 bp GCCGGAGCGCACTGGCATGGCTGGACGGCGTCAGCTCGCTCACATTaGGCTGGCTGCCCCGGCGCGACGAGCAGCAGCAGCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AGAHWHGWTASARSH*AGCPGATSSSSSSR
Trigger: CCTGCTGCTGCTGCTGCTGCTCGTCGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGCTCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp TGGGAGGCGGACGCCGACTGCTGCGCGGACTGCTGCGCGTACTGCTaGCGGAGCGCACTGGCATGGCTGGACGGCGTCAGCTCGCTCACA +
Preference number: 5 (lower is better)
Translates to: WEADADCCADCCAYC*RSALAWLDGVSSLT
Trigger: TGTGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCAGTCCGCGCAGCAGTCGGCGTCCGCCTCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp TACTGGGAGGCGGACGCCGACTGCTGCGCGGACTGCTGCGCGTACTaGTGCCGGAGCGCACTGGCATGGCTGGACGGCGTCAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: YWEADADCCADCCAY*CRSALAWLDGVSSL
Trigger: GAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCAGTCCGCGCAGCAGTCGGCGTCCGCCTCCCAGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp ATTTCGGTGAAGGGGTTGCTCTCGCGGCGCGCCTGGGGCTGGTGGTaGTGGTGGTGCGCCGGGTGCGGGTGGTGGTGGTGGTGCGAGAGC +
Preference number: 5 (lower is better)
Translates to: ISVKGLLSRRAWGWW*WWCAGCGWWWWCES
Trigger: GCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAGCAACCCCTTCACCGAAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp TGCTGCCGTGCCCGCTCCCGCCACCGCCGCCGCCTCCTCCAGTGCTaGCTCCGCCGCCGGTTCCATAGAGCGCCAGGTTGTTGGAGTTGT +
Preference number: 5 (lower is better)
Translates to: CCRARSRHRRRLLQC*LRRRFHRAPGCWSC
Trigger: ACAACTCCAACAACCTGGCGCTCTATGGAACCGGCGGCGGAGGCAGCACTGGAGGAGGCGGCGGCGGTGGCGGGAGCGGGCACGGCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS GCA 90 bp CTCAGGCCCTCCGGCAGCCCGAATCCGGAGGTCCCAGGGCTTCCTTaGCGGTGGAGAGGCAGGCGGCTCGCTCAAAGGTGTGGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LRPSGSPNPEVPGLP*RWRGRRLAQRCGGC
Trigger: GCAGCCCCCACACCTTTGAGCGAGCCGCCTGCCTCTCCACCGGCAAGGAAGCCCTGGGACCTCCGGATTCGGGCTGCCGGAGGGCCTGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 90 bp CCCTCCGGCAGCCCGAATCCGGAGGTCCCAGGGCTTCCTTGCCGGTaGAGAGGCAGGCGGCTCGCTCAAAGGTGTGGGGGCTGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PSGSPNPEVPGLPCR*RGRRLAQRCGGCSA
Trigger: GGCTGAGCAGCCCCCACACCTTTGAGCGAGCCGCCTGCCTCTCCACCGGCAAGGAAGCCCTGGGACCTCCGGATTCGGGCTGCCGGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 90 bp TGCTGCGCGGACTGCTGCGCGTACTGCTGCCGGAGCGCACTGGCATaGCTGGACGGCGTCAGCTCGCTCACATTGAGCTGGCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: CCADCCAYCCRSALA*LDGVSSLTLSWLPR
Trigger: CCGGGGCAGCCAGCTCAATGTGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCAGTCCGCGCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 90 bp ATGGCTATTTCGGTGAAGGGGTTGCTCTCGCGGCGCGCCTGGGGCTaGTGGTGCTGGTGGTGCGCCGGGTGCGGGTGGTGGTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: MAISVKGLLSRRAWG*WCWWCAGCGWWWWC
Trigger: GCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAGCAACCCCTTCACCGAAATAGCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp AGGAGTCCTAGCCAGGACCATCTGCCTCTCGGGCGTCAAATTCCGTaGCTGCTTGCGGCCCGGGAGAGCGCCCCCGGCTCCCCAGCTTCG +
Preference number: 5 (lower is better)
Translates to: RSPSQDHLPLGRQIP*LLAARESAPGSPAS
Trigger: CGAAGCTGGGGAGCCGGGGGCGCTCTCCCGGGCCGCAAGCAGGCACGGAATTTGACGCCCGAGAGGCAGATGGTCCTGGCTAGGACTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS CCA 90 bp AGCGCACTGGCATGGCTGGACGGCGTCAGCTCGCTCACATTGAGCTaGCTGCCCCGGCGCGACGAGCAGCAGCAGCAGCAGCAGGACGAG +
Preference number: 5 (lower is better)
Translates to: SALAWLDGVSSLTLS*LPRRDEQQQQQQDE
Trigger: CTCGTCCTGCTGCTGCTGCTGCTGCTCGTCGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 90 bp CCTTGCCGGTGGAGAGGCAGGCGGCTCGCTCAAAGGTGTGGGGGCTaGTCAGCCACCGCCGGCCTCCAGCTGCTCTTCTGCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PCRWRGRRLAQRCGG*SATAGLQLLFCFSS
Trigger: GGAAGAGAAGCAGAAGAGCAGCTGGAGGCCGGCGGTGGCTGAGCAGCCCCCACACCTTTGAGCGAGCCGCCTGCCTCTCCACCGGCAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 90 bp CACCCTGCGCAATGCGTTATGGTCGGGAGCGGGGACTCCTGCTGCTaGTGCGAGGAAGGGCCCATGCCGGCTCCGGTAGAATCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: HPAQCVMVGSGDSCC*CEEGPMPAPVESRR
Trigger: CCGCCTGGATTCTACCGGAGCCGGCATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 90 bp GTGCACCCTGCGCAATGCGTTATGGTCGGGAGCGGGGACTCCTGCTaGTGGTGCGAGGAAGGGCCCATGCCGGCTCCGGTAGAATCCAGG +
Preference number: 5 (lower is better)
Translates to: VHPAQCVMVGSGDSC*WCEEGPMPAPVESR
Trigger: CCTGGATTCTACCGGAGCCGGCATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 90 bp GTGGTGCACCCTGCGCAATGCGTTATGGTCGGGAGCGGGGACTCCTaGTGCTGGTGCGAGGAAGGGCCCATGCCGGCTCCGGTAGAATCC +
Preference number: 5 (lower is better)
Translates to: VVHPAQCVMVGSGDS*CWCEEGPMPAPVES
Trigger: GGATTCTACCGGAGCCGGCATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 90 bp TGCTGCTGGCAATGCAGGTGTGAGGAGCGCGGCGGCGGCGGCGGCTaGTCTGGGAAGAAGCCGCGCTGGAACTGCAATGGGGTTTCCATG +
Preference number: 5 (lower is better)
Translates to: CCWQCRCEERGGGGG*SGKKPRWNCNGVSM
Trigger: CATGGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCCCAGAGCAGCCGCCGCCGCCGCCGCGCTCCTCACACCTGCATTGCCAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS CCA 90 bp ATGGGCATGACATCACATTTGCGCCTTCTCCAGAACATGAGGGGATaGCGCCCCCGGCCGCCGGGTCCTGGGCTCTGGCGCTCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: MGMTSHLRLLQNMRG*RPRPPGPGLWRSGP
Trigger: AGGGCCTGAGCGCCAGAGCCCAGGACCCGGCGGCCGGGGGCGCCATCCCCTCATGTTCTGGAGAAGGCGCAAATGTGATGTCATGCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 90 bp AGCTGCAGGGAGACCAAGCGGTGGTGCACCCTGCGCAATGCGTTATaGTCGGGAGCGGGGACTCCTGCTGCTGGTGCGAGGAAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SCRETKRWCTLRNAL*SGAGTPAAGARKGP
Trigger: TGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCACCGCTTGGTCTCCCTGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 90 bp CGCGGCGGCGGCGGCGGCTGCTCTGGGAAGAAGCCGCGCTGGAACTaGAATGGGGTTTCCATGTCAGGGCTGTTAAAGCTGCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RGGGGGCSGKKPRWN*NGVSMSGLLKLQGD
Trigger: GTCTCCCTGCAGCTTTAACAGCCCTGACATGGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCCCAGAGCAGCCGCCGCCGCCGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS GCA 90 bp GTCAGGGCTGTTAAAGCTGCAGGGAGACCAAGCGGTGGTGCACCCTaGGCAATGCGTTATGGTCGGGAGCGGGGACTCCTGCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VRAVKAAGRPSGGAP*AMRYGRERGLLLLV
Trigger: CACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCACCGCTTGGTCTCCCTGCAGCTTTAACAGCCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 90 bp GCCGGTGGCCCAGCTTGTAGCCGATGTTCTGGTTTTTCTTTTTGCTaGACTTGGTGCCACTGCTGCTGCCGTGCCCGCTCCCGCCACCGC +
Preference number: 5 (lower is better)
Translates to: AGGPACSRCSGFSFC*TWCHCCCRARSRHR
Trigger: GCGGTGGCGGGAGCGGGCACGGCAGCAGCAGTGGCACCAAGTCCAGCAAAAAGAAAAACCAGAACATCGGCTACAAGCTGGGCCACCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS CCA 90 bp CGGCGGCGGCGGCTGCTCTGGGAAGAAGCCGCGCTGGAACTGCAATaGGGTTTCCATGTCAGGGCTGTTAAAGCTGCAGGGAGACCAAGC +
Preference number: 5 (lower is better)
Translates to: RRRRLLWEEAALELQ*GFHVRAVKAAGRPS
Trigger: GCTTGGTCTCCCTGCAGCTTTAACAGCCCTGACATGGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCCCAGAGCAGCCGCCGCCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS GCA 90 bp CTGTTAAAGCTGCAGGGAGACCAAGCGGTGGTGCACCCTGCGCAATaGGTTATGGTCGGGAGCGGGGACTCCTGCTGCTGGTGCGAGGAA +
Preference number: 5 (lower is better)
Translates to: LLKLQGDQAVVHPAQ*VMVGSGDSCCWCEE
Trigger: TTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCACCGCTTGGTCTCCCTGCAGCTTTAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 90 bp GCCCATGCCGGCTCCGGTAGAATCCAGGCGGCGAGTCCGATTGGTTaGGCGCACCAAAACAATGGGCATGACATCACATTTGCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: AHAGSGRIQAASPIG*AHQNNGHDITFAPS
Trigger: AGAAGGCGCAAATGTGATGTCATGCCCATTGTTTTGGTGCGCCCAACCAATCGGACTCGCCGCCTGGATTCTACCGGAGCCGGCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS TCA 90 bp CGTGGGCTCGCTGGCTTCAGGAGTGAAGCTGCAGACCTTTCGCGGTaGGTGTTACAGCTCATAAAGGCAGTGTGGACCCAAAGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: RGLAGFRSEAADLSR*VLQLIKAVWTQRVS
Trigger: GCTCACTCTTTGGGTCCACACTGCCTTTATGAGCTGTAACACTCACCGCGAAAGGTCTGCAGCTTCACTCCTGAAGCCAGCGAGCCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503706.5
ENST00000505491.1
CDS TCA 90 bp TGTTCATTCCTCCCTGTGGGCTCGTGGGCTCGCTGGCTTCAGGAGTaGAGCTGCAGACCTTTCGCGGTGAGTGTTACAGCTCATAAAGGC +
Preference number: 5 (lower is better)
Translates to: CSFLPVGSWARWLQE*SCRPFAVSVTAHKG
Trigger: GCCTTTATGAGCTGTAACACTCACCGCGAAAGGTCTGCAGCTTCACTCCTGAAGCCAGCGAGCCCACGAGCCCACAGGGAGGAATGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503706.5
ENST00000505491.1
CDS CCA 90 bp AACTTATTCTCTTCTAGCTACTCTCTGATGAAGTTGGTGGTGCTGTaGAAGAGGACCGCCGCCTCCTGGACGAGGACCGGGACCGCTCAG +
Preference number: 5 (lower is better)
Translates to: NLFSSSYSLMKLVVL*KRTAASWTRTGTAQ
Trigger: CTGAGCGGTCCCGGTCCTCGTCCAGGAGGCGGCGGTCCTCTTCCACAGCACCACCAACTTCATCAGAGAGTAGCTAGAAGAGAATAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS CCA 90 bp CTGATGTTCGGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCCTaGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: LMFGCVRSFFLLVGS*SRWLRSEAADLRRE
Trigger: CTCACGGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCAGGAACCCACCAGAAGGAAGAAACTCCGAACACATCCGAACATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503706.5
ENST00000505491.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGAGGAGGCGCAGCTGTaGCACCGGAGGCATGGGCTG +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPEEAQL*HRRHGL
Trigger: CAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCTC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGTCAGCTCGCTCACATaGAGCTGGCTGCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPVSSLT*SWLPRR
Trigger: GCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGAC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACGGGACGCGCTCAAGTaGCTGAGCGGCCGCATGACG +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQRDALK*LSGRMT
Trigger: CGTCATGCGGCCGCTCAGCAACTTGAGCGCGTCCCG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCGGGACGCGCTCAAGTaGCTGAGCGGCCGCATGACG +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPRDALK*LSGRMT
Trigger: CGTCATGCGGCCGCTCAGCAACTTGAGCGCGTCCCG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS TCA 90 bp AAAGCGGTAAATGCGGCCTTGGTGAAATGCGCCAGTGGACAAAGCTaGAGATCGAGTCCACTGAGAATTCCGGCAGGTTCACCGGGAGAA +
Preference number: 5 (lower is better)
Translates to: KAVNAALVKCASGQS*RSSPLRIPAGSPGE
Trigger: TTCTCCCGGTGAACCTGCCGGAATTCTCAGTGGACTCGATCTTCAGCTTTGTCCACTGGCGCATTTCACCAAGGCCGCATTTACCGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS TCA 90 bp CGCATTCCCACACCCTCGTTCTGCAACCAGGAGTCCCGCTCCATTTaGAGCTCAAATTTGCCTCAAAGCGGTAAATGCGGCCTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: RIPTPSFCNQESRSI*SSNLPQSGKCGLGE
Trigger: TTCACCAAGGCCGCATTTACCGCTTTGAGGCAAATTTGAGCTTCAAATGGAGCGGGACTCCTGGTTGCAGAACGAGGGTGTGGGAATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512927.2
CDS GCA 90 bp CCTCGTTCTGCAACCAGGAGTCCCGCTCCATTTGAAGCTCAAATTTaGCTCAAAGCGGTAAATGCGGCCTTGGTGAAATGCGCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: PRSATRSPAPFEAQI*LKAVNAALVKCASG
Trigger: TCCACTGGCGCATTTCACCAAGGCCGCATTTACCGCTTTGAGGCAAATTTGAGCTTCAAATGGAGCGGGACTCCTGGTTGCAGAACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512927.2
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAATTTCGGTGAAGGGGTaGCTCTCGCGGCGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQISVKG*LSRRAW
Trigger: CCAGGCGCGCCGCGAGAGCAACCCCTTCACCGAAAT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAAGGGCGGGCACGGCTaGTCCTGGCTCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQKGGHG*SWLCCC
Trigger: GCAGCAACAGAGCCAGGACAAGCCGTGCCCGCCCTT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS GCA 90 bp TCTCGTTCTGCAACCAGGAGTCCCGCTCCATTTGAAGCTCAAATTTaGCTCAAAGCGGTAAATGCGGCCTTGGTGAAATGCGCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: SRSATRSPAPFEAQI*LKAVNAALVKCASG
Trigger: TCCACTGGCGCATTTCACCAAGGCCGCATTTACCGCTTTGAGGCAAATTTGAGCTTCAAATGGAGCGGGACTCCTGGTTGCAGAACGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CAA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAGGAGGCGCAGCTGTaGCACCGGAGGCATGGGCTG +
Preference number: 5 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSEEAQL*HRRHGL
Trigger: CAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCTC...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGTCAGCTCGCTCACATaGAGCTGGCTGCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEVSSLT*SWLPRR
Trigger: GCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGAC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCGCATGACGCCCCCGTaGTACCTGCAGCTGCTCATG +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPRMTPP*YLQLLM
Trigger: CATGAGCAGCTGCAGGTACAACGGGGGCGTCATGCG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACGCATGACGCCCCCGTaGTACCTGCAGCTGCTCATG +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQRMTPP*YLQLLM
Trigger: CATGAGCAGCTGCAGGTACAACGGGGGCGTCATGCG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACGGGACGCGCTCAAGTaGCTGAGCGGCCGCATGACG +
Preference number: 5 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSRDALK*LSGRMT
Trigger: CGTCATGCGGCCGCTCAGCAACTTGAGCGCGTCCCG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACGGGACGCGCTCAAGTaGCTGAGCGGCCGCATGACG +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSERDALK*LSGRMT
Trigger: CGTCATGCGGCCGCTCAGCAACTTGAGCGCGTCCCG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAAATTCCGTGCCTGCTaGCGGCCCGGGAGAGCGCCC +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEKFRAC*RPGRAP
Trigger: GGGCGCTCTCCCGGGCCGCAAGCAGGCACGGAATTT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 90 bp AATTTGCCTCAAAGCGGTAAATGCGGCCTTGGTGAAATGCGCCAGTaGACAAAGCTGAAGATCGAGTCCACTGAGAATTCCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: NLPQSGKCGLGEMRQ*TKLKIESTENSGRF
Trigger: GAACCTGCCGGAATTCTCAGTGGACTCGATCTTCAGCTTTGTCCACTGGCGCATTTCACCAAGGCCGCATTTACCGCTTTGAGGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCAGGCGGCGAGTCCGATaGGTTGGGCGCACCAAAACA +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPRRRVR*VGRTKT
Trigger: TGTTTTGGTGCGCCCAACCAATCGGACTCGCCGCCT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAAAGGGCGGGCACGGCTaGTCCTGGCTCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEKGGHG*SWLCCC
Trigger: GCAGCAACAGAGCCAGGACAAGCCGTGCCCGCCCTT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS TCA 90 bp AGTGTTACAGCTCTTAAGGTGGCGCCGTCTGGAGTTTGTTCCTTCTaGTGTTCGGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SVTALKVAPSGVCSF*CSDVFGVSSFWWVP
Trigger: AGGAACCCACCAGAAGGAAGAAACTCCGAACACATCCGAACATCAGAAGGAACAAACTCCAGACGGCGCCACCTTAAGAGCTGTAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503706.5
ENST00000505491.1
CDS TCA 90 bp CTCTCAGCAAGAATCTCGTTCTGCAACCAGGAGTCCCGCTCCATTTaGAGCTCAAATTTGCCTCAAAGCGGTAAATGCGGCCTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: LSARISFCNQESRSI*SSNLPQSGKCGLGE
Trigger: TTCACCAAGGCCGCATTTACCGCTTTGAGGCAAATTTGAGCTTCAAATGGAGCGGGACTCCTGGTTGCAGAACGAGATTCTTGCTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACGCATGACGCCCCCGTaGTACCTGCAGCTGCTCATG +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSERMTPP*YLQLLM
Trigger: CATGAGCAGCTGCAGGTACAACGGGGGCGTCATGCG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCCACATCAGCGGTGGTaGTGGATGGGGCATAGGAGA +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPPHQRW*WMGHRR
Trigger: TCTCCTATGCCCCATCCACAACCACCGCTGATGTGG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACCACATCAGCGGTGGTaGTGGATGGGGCATAGGAGA +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQPHQRW*WMGHRR
Trigger: TCTCCTATGCCCCATCCACAACCACCGCTGATGTGG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGCGGTAAATGCGGCCTaGGTGAAATGCGCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPAVNAA*VKCASG
Trigger: TCCACTGGCGCATTTCACCAAGGCCGCATTTACCGC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGGCGAGTCCGATTGGTaGGGCGCACCAAAACAATGG +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPGESDW*GAPKQW
Trigger: CCATTGTTTTGGTGCGCCCAACCAATCGGACTCGCC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGCCAGGTTGTTGGAGTaGTTGTGCTCGGGCTTAGAC +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQARLLE*LCSGLD
Trigger: GTCTAAGCCCGAGCACAACAACTCCAACAACCTGGC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAATTGGGGTCCAACTTTaGGGCGCCCAGCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEIGVQL*GAQLPP
Trigger: AGGTGGGAGCTGGGCGCCCAAAAGTTGGACCCCAAT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CAA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACCACATCAGCGGTGGTaGTGGATGGGGCATAGGAGA +
Preference number: 5 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSPHQRW*WMGHRR
Trigger: TCTCCTATGCCCCATCCACAACCACCGCTGATGTGG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGCCAGGTTGTTGGAGTaGTTGTGCTCGGGCTTAGAC +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEARLLE*LCSGLD
Trigger: GTCTAAGCCCGAGCACAACAACTCCAACAACCTGGC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATACTCTCTGATGAAGTaGGTGGTGCTGTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQYSLMK*VVLWKR
Trigger: CCTCTTCCACAGCACCACCAACTTCATCAGAGAGTA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGCTAGTAACATCCTGTaGATCATGGTACTGCGTCCG +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPASNIL*IMVLRP
Trigger: CGGACGCAGTACCATGATCAACAGGATGTTACTAGC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503706.5
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGGAGTCCCGCTCCATTaGAAGCTCAAATTTGCCTCA +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPGVPLH*KLKFAS
Trigger: TGAGGCAAATTTGAGCTTCAAATGGAGCGGGACTCC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCGGCATGACATCACATTaGCGCCTTCTCCAGAACATG +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPGMTSH*RLLQNM
Trigger: CATGTTCTGGAGAAGGCGCAAATGTGATGTCATGCC...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATTCTGGTTTTTCTTTTaGCTGGACTTGGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQFWFFF*LDLVPL
Trigger: CAGTGGCACCAAGTCCAGCAAAAAGAAAAACCAGAA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCCACCAAAGTGTTTGCTaGGTCATTCAGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPHQSVC*VIQFPL
Trigger: CAGAGGAAACTGAATGACCAAGCAAACACTTTGGTG...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAACACCAAAGTGTTTGCTaGGTCATTCAGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQHQSVC*VIQFPL
Trigger: CAGAGGAAACTGAATGACCAAGCAAACACTTTGGTG...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAAGTCCACCAAAGTGTTaGCTTGGTCATTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQSPPKC*LGHSVS
Trigger: GGAAACTGAATGACCAAGCAAACACTTTGGTGGACT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATACTCTCTGATGAAGTaGGTGGTGCTGTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSYSLMK*VVLWKR
Trigger: CCTCTTCCACAGCACCACCAACTTCATCAGAGAGTA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATACTCTCTGATGAAGTaGGTGGTGCTGTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEYSLMK*VVLWKR
Trigger: CCTCTTCCACAGCACCACCAACTTCATCAGAGAGTA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAGCTAGTAACATCCTGTaGATCATGGTACCTTTCACA +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQASNIL*IMVPFT
Trigger: TGTGAAAGGTACCATGATCAACAGGATGTTACTAGC...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATTCTGGTTTTTCTTTTaGCTGGACTTGGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEFWFFF*LDLVPL
Trigger: CAGTGGCACCAAGTCCAGCAAAAAGAAAAACCAGAA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATTCTGGTTTTTCTTTTaGCTGGACTTGGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSFWFFF*LDLVPL
Trigger: CAGTGGCACCAAGTCCAGCAAAAAGAAAAACCAGAA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAATGGAGAGAAAAGTTATaGATATCAACCACATCGCTC +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQWREKL*ISTTSL
Trigger: GAGCGATGTGGTTGATATCAATAACTTTTCTCTCCA...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCTGGAGAGAAAAGTTATaGATATCAACCACATCGCTC +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPWREKL*ISTTSL
Trigger: GAGCGATGTGGTTGATATCAATAACTTTTCTCTCCA...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp GATTCTGACATCAGAACCCGGATAACGCTGATTAGAACCATAGGGGCTTTACAAACGTGTTTTTCTGCTTaGGTAAGTTCTAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: DSDIRTRITLIRTIGALQTCFSA*VSSSFL
Trigger: AAGGAAGCTAGAACTTACCAAAGCAGAAAAACACGT...TTGTAAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp CATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACCCACGTGTTTTTCTGCTTaGGTAAGTTCTAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: HFGLKLSVQVPRILTSEPTCFSA*VSSSFL
Trigger: AAGGAAGCTAGAACTTACCAAAGCAGAAAAACACGT...GGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAACACCAAAGTGTTTGCTaGGTCATTCAGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEHQSVC*VIQFPL
Trigger: CAGAGGAAACTGAATGACCAAGCAAACACTTTGGTG...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCACACCAAAGTGTTTGCTaGGTCATTCAGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSHQSVC*VIQFPL
Trigger: CAGAGGAAACTGAATGACCAAGCAAACACTTTGGTG...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAAGTCCACCAAAGTGTTaGCTTGGTCATTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSSPPKC*LGHSVS
Trigger: GGAAACTGAATGACCAAGCAAACACTTTGGTGGACT...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGCTAGTAACATCCTGTaGATCATGGTACCTTTCACA +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEASNIL*IMVPFT
Trigger: TGTGAAAGGTACCATGATCAACAGGATGTTACTAGC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGATTCATTTTTCCTCTaGCTGGAGTCCATCCTTTTG +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEDSFFL*LESILL
Trigger: CAAAAGGATGGACTCCAGCAAGAGGAAAAATGAATC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 90 bp TACATGATGTTCTGGGTCTTTGCCAAGTCCACCAAAGTGTTTGCTTaGTCATTCAGTTTCCTCTGCTCCATTTTTACACTTCTTAATTTC +
Preference number: 5 (lower is better)
Translates to: YMMFWVFAKSTKVFA*SFSFLCSIFTLLNF
Trigger: GAAATTAAGAAGTGTAAAAATGGAGCAGAGGAAACTGAATGACCAAGCAAACACTTTGGTGGACTTGGCAAAGACCCAGAACATCATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000631899.2
ENST00000632892.1
CDS-3UTR CAA 90 bp TTCACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCATGGAGAGAAAAGTTATaGATATCAACCACATCGCTC +
Preference number: 5 (lower is better)
Translates to: FTHFGLKLSVQVPRILTSWREKL*ISTTSL
Trigger: GAGCGATGTGGTTGATATCAATAACTTTTCTCTCCA...TGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAATGGAGAGAAAAGTTATaGATATCAACCACATCGCTC +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEWREKL*ISTTSL
Trigger: GAGCGATGTGGTTGATATCAATAACTTTTCTCTCCA...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAACGTGTTTTTCTGCTTaGGTAAGTTCTAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSETCFSA*VSSSFL
Trigger: AAGGAAGCTAGAACTTACCAAAGCAGAAAAACACGT...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS-3UTR CAA 90 bp ACTCATTTTGGCCTAAAACTTAGTGTTCAGGTTCCCAGGATTCTGACATCAGAAGCTAGTAACATCCTGTaGATCATGGTACCTGTATTT +
Preference number: 5 (lower is better)
Translates to: THFGLKLSVQVPRILTSEASNIL*IMVPVF
Trigger: AAATACAGGTACCATGATCAACAGGATGTTACTAGC...TTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTTAGGCCAAAATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610748.4
CDS TCA 90 bp GCCTTTTTAGAAGTACTTGTACCTGCCTGGGAACAACACTTAAATTaGAATAGGGAGATACTACCACTTTCTTTCTGTGGTAAATTCTAT +
Preference number: 5 (lower is better)
Translates to: AFLEVLVPAWEQHLN*NREILPLSFCGKFY
Trigger: ATAGAATTTACCACAGAAAGAAAGTGGTAGTATCTCCCTATTTCAATTTAAGTGTTGTTCCCAGGCAGGTACAAGTACTTCTAAAAAGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506812.2
ENST00000632892.1
CDS CCA 72 bp AGGGGATGGCGCCCCCGGCCGCCGGGTCCTGGGCTCTaGCGCTCAGGCCCTCCGGCAGCCCGAATCCGGAGG +
Preference number: 6 (lower is better)
Translates to: RGWRPRPPGPGL*RSGPPAARIRR
Trigger: CCTCCGGATTCGGGCTGCCGGAGGGCCTGAGCGCCAGAGCCCAGGACCCGGCGGCCGGGGGCGCCATCCCCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 72 bp TGGGGCTGGTGGTGCTGGTGGTGCGCCGGGTGCGGGTaGTGGTGGTGGTGCGAGAGCGGGGGCCCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: WGWWCWWCAGCG*WWWCESGGPEP
Trigger: GGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp TGCTGGTGGTGCGCCGGGTGCGGGTGGTGGTGGTGGTaGGAGAGCGGGGGCCCGGAGCCCAGACTGCCGAGG +
Preference number: 6 (lower is better)
Translates to: CWWCAGCGWWWW*ESGGPEPRLPR
Trigger: CCTCGGCAGTCTGGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 72 bp TGGTGCTGGTGGTGCGCCGGGTGCGGGTGGTGGTGGTaGTGCGAGAGCGGGGGCCCGGAGCCCAGACTGCCG +
Preference number: 6 (lower is better)
Translates to: WCWWCAGCGWWW*CESGGPEPRLP
Trigger: CGGCAGTCTGGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 72 bp GGCTGGTGGTGCTGGTGGTGCGCCGGGTGCGGGTGGTaGTGGTGGTGCGAGAGCGGGGGCCCGGAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: GWWCWWCAGCGW*WWCESGGPEPR
Trigger: TCTGGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 72 bp GGGTTGCTCTCGCGGCGCGCCTGGGGCTGGTGGTGCTaGTGGTGCGCCGGGTGCGGGTGGTGGTGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: GLLSRRAWGWWC*WCAGCGWWWWC
Trigger: GCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAGCAACCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp AAGGGGTTGCTCTCGCGGCGCGCCTGGGGCTGGTGGTaGTGGTGGTGCGCCGGGTGCGGGTGGTGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: KGLLSRRAWGWW*WWCAGCGWWWW
Trigger: CCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAGCAACCCCTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp AGGAGGCGCAGCTGTTGCACCGGAGGCATGGGCTGCTaGCGCCGCTGGCCGGCTGCTGGTGCGCGAGGTGCG +
Preference number: 6 (lower is better)
Translates to: RRRSCCTGGMGC*RRWPAAGARGA
Trigger: CGCACCTCGCGCACCAGCAGCCGGCCAGCGGCGGCAGCAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS GCA 72 bp CGGAGGAGGCGCAGCTGTTGCACCGGAGGCATGGGCTaGTGCCGCCGCTGGCCGGCTGCTGGTGCGCGAGGT +
Preference number: 6 (lower is better)
Translates to: RRRRSCCTGGMG*CRRWPAAGARG
Trigger: ACCTCGCGCACCAGCAGCCGGCCAGCGGCGGCAGCAGCCCATGCCTCCGGTGCAACAGCTGCGCCTCCTCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS CCA 72 bp TGGTGGTGCTGGTGGTGCGCCGGGTGCGGGTGGTGGTaGTGGTGCGAGAGCGGGGGCCCGGAGCCCAGACTG +
Preference number: 6 (lower is better)
Translates to: WWCWWCAGCGWW*WCESGGPEPRL
Trigger: CAGTCTGGGCTCCGGGCCCCCGCTCTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 72 bp TTGCTCTCGCGGCGCGCCTGGGGCTGGTGGTGCTGGTaGTGCGCCGGGTGCGGGTGGTGGTGGTGGTGCGAG +
Preference number: 6 (lower is better)
Translates to: LLSRRAWGWWCW*CAGCGWWWWCE
Trigger: CTCGCACCACCACCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAGCAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 72 bp TCGGTGAAGGGGTTGCTCTCGCGGCGCGCCTGGGGCTaGTGGTGCTGGTGGTGCGCCGGGTGCGGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: SVKGLLSRRAWG*WCWWCAGCGWW
Trigger: CCACCACCCGCACCCGGCGCACCACCAGCACCACCAGCCCCAGGCGCGCCGCGAGAGCAACCCCTTCACCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp GCGGACGCCGACTGCTGCGCGGACTGCTGCGCGTACTaGTGCCGGAGCGCACTGGCATGGCTGGACGGCGTC +
Preference number: 6 (lower is better)
Translates to: ADADCCADCCAY*CRSALAWLDGV
Trigger: GACGCCGTCCAGCCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCAGTCCGCGCAGCAGTCGGCGTCCGC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 72 bp CCGCCGGGACTGGGGACTCCCTCCTTCTTGAGTCCTTaGCTGGCAGGAGCGAGTCCTGCAGGCGGGGGCCCG +
Preference number: 6 (lower is better)
Translates to: PPGLGTPSFLSP*LAGASPAGGGP
Trigger: CGGGCCCCCGCCTGCAGGACTCGCTCCTGCCAGCCAAGGACTCAAGAAGGAGGGAGTCCCCAGTCCCGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512927.2
CDS CAA 90 bp GCTCAGGCCCTCCGGCAGCCCGAATCCGGAGGTCCCAGGGCTTCCTaGCCGGTGGAGAGGCAGGCGGCTCGCTCAAAGGTGTGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: AQALRQPESGGPRAS*PVERQAARSKVWGL
Trigger: CAGCCCCCACACCTTTGAGCGAGCCGCCTGCCTCTCCACCGGCAAGGAAGCCCTGGGACCTCCGGATTCGGGCTGCCGGAGGGCCTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 72 bp TACTGGGAGGCGGACGCCGACTGCTGCGCGGACTGCTaGGCGTACTGCTGCCGGAGCGCACTGGCATGGCTG +
Preference number: 6 (lower is better)
Translates to: YWEADADCCADC*AYCCRSALAWL
Trigger: CAGCCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCAGTCCGCGCAGCAGTCGGCGTCCGCCTCCCAGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp TGGTACTGGGAGGCGGACGCCGACTGCTGCGCGGACTaGTGCGCGTACTGCTGCCGGAGCGCACTGGCATGG +
Preference number: 6 (lower is better)
Translates to: WYWEADADCCAD*CAYCCRSALAW
Trigger: CCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCAGTCCGCGCAGCAGTCGGCGTCCGCCTCCCAGTACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp TGGCACTGGTGGTACTGGGAGGCGGACGCCGACTGCTaGGCGGACTGCTGCGCGTACTGCTGCCGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: WHWWYWEADADC*ADCCAYCCRSA
Trigger: TGCGCTCCGGCAGCAGTACGCGCAGCAGTCCGCGCAGCAGTCGGCGTCCGCCTCCCAGTACCACCAGTGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp CTGTGGCACTGGTGGTACTGGGAGGCGGACGCCGACTaGTGCGCGGACTGCTGCGCGTACTGCTGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: LWHWWYWEADAD*CADCCAYCCRS
Trigger: GCTCCGGCAGCAGTACGCGCAGCAGTCCGCGCAGCAGTCGGCGTCCGCCTCCCAGTACCACCAGTGCCACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp CCATCTGCCTCTCGGGCGTCAAATTCCGTGCCTGCTTaGGGCCCGGGAGAGCGCCCCCGGCTCCCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: PSASRASNSVPA*GPGERPRLPSF
Trigger: GAAGCTGGGGAGCCGGGGGCGCTCTCCCGGGCCGCAAGCAGGCACGGAATTTGACGCCCGAGAGGCAGATGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS GCA 72 bp AGGACCATCTGCCTCTCGGGCGTCAAATTCCGTGCCTaGTTGCGGCCCGGGAGAGCGCCCCCGGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: RTICLSGVKFRA*LRPGRAPPAPQ
Trigger: CTGGGGAGCCGGGGGCGCTCTCCCGGGCCGCAAGCAGGCACGGAATTTGACGCCCGAGAGGCAGATGGTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS GCA 72 bp AGCCAGGACCATCTGCCTCTCGGGCGTCAAATTCCGTaGCTGCTTGCGGCCCGGGAGAGCGCCCCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: SQDHLPLGRQIP*LLAARESAPGS
Trigger: GGAGCCGGGGGCGCTCTCCCGGGCCGCAAGCAGGCACGGAATTTGACGCCCGAGAGGCAGATGGTCCTGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS CAA 90 bp TGCCGGAGCGCACTGGCATGGCTGGACGGCGTCAGCTCGCTCACATaGAGCTGGCTGCCCCGGCGCGACGAGCAGCAGCAGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: CRSALAWLDGVSSLT*SWLPRRDEQQQQQQ
Trigger: CTGCTGCTGCTGCTGCTGCTCGTCGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGCTCCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS TCA 72 bp CACTGGCATGGCTGGACGGCGTCAGCTCGCTCACATTaGGCTGGCTGCCCCGGCGCGACGAGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: HWHGWTASARSH*AGCPGATSSSS
Trigger: GCTGCTGCTGCTCGTCGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGACGCCGTCCAGCCATGCCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp GGGGGCTGCAGGGGCTGCGCCTCTGAGTCCATCTCGTaGAGGTTCCGGCGGGACGCGCTCAAGTTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: GGCRGCASESIS*RFRRDALKLLS
Trigger: GCTCAGCAACTTGAGCGCGTCCCGCCGGAACCTGCACGAGATGGACTCAGAGGCGCAGCCCCTGCAGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS GCA 72 bp TGGAGAGGCAGGCGGCTCGCTCAAAGGTGTGGGGGCTaGTCAGCCACCGCCGGCCTCCAGCTGCTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: WRGRRLAQRCGG*SATAGLQLLFC
Trigger: GCAGAAGAGCAGCTGGAGGCCGGCGGTGGCTGAGCAGCCCCCACACCTTTGAGCGAGCCGCCTGCCTCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 72 bp CCTGCGCAATGCGTTATGGTCGGGAGCGGGGACTCCTaGTGCTGGTGCGAGGAAGGGCCCATGCCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: PAQCVMVGSGDS*CWCEEGPMPAP
Trigger: CGGAGCCGGCATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 72 bp AAGGGCGGGCACGGCTTGTCCTGGCTCTGTTGCTGCTaGTGGCAATGCAGGTGTGAGGAGCGCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: KGGHGLSWLCCC*WQCRCEERGGG
Trigger: GCCGCCGCCGCGCTCCTCACACCTGCATTGCCAGCAGCAGCAACAGAGCCAGGACAAGCCGTGCCCGCCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS CCA 72 bp GCATGGCTGGACGGCGTCAGCTCGCTCACATTGAGCTaGCTGCCCCGGCGCGACGAGCAGCAGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: AWLDGVSSLTLS*LPRRDEQQQQQ
Trigger: CTGCTGCTGCTGCTGCTCGTCGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGACGCCGTCCAGCCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 72 bp AGCCCGAATCCGGAGGTCCCAGGGCTTCCTTGCCGGTaGAGAGGCAGGCGGCTCGCTCAAAGGTGTGGGGGC +
Preference number: 6 (lower is better)
Translates to: SPNPEVPGLPCR*RGRRLAQRCGG
Trigger: GCCCCCACACCTTTGAGCGAGCCGCCTGCCTCTCCACCGGCAAGGAAGCCCTGGGACCTCCGGATTCGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CAA 72 bp GCACTGGCATGGCTGGACGGCGTCAGCTCGCTCACATaGAGCTGGCTGCCCCGGCGCGACGAGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: ALAWLDGVSSLT*SWLPRRDEQQQ
Trigger: CTGCTGCTGCTCGTCGCGCCGGGGCAGCCAGCTCAATGTGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CAA 72 bp ACCATCTGCCTCTCGGGCGTCAAATTCCGTGCCTGCTaGCGGCCCGGGAGAGCGCCCCCGGCTCCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: TICLSGVKFRAC*RPGRAPPAPQL
Trigger: AAGCTGGGGAGCCGGGGGCGCTCTCCCGGGCCGCAAGCAGGCACGGAATTTGACGCCCGAGAGGCAGATGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS GCA 72 bp TCCGGCAGCCCGAATCCGGAGGTCCCAGGGCTTCCTTaGCGGTGGAGAGGCAGGCGGCTCGCTCAAAGGTGT +
Preference number: 6 (lower is better)
Translates to: SGSPNPEVPGLP*RWRGRRLAQRC
Trigger: ACACCTTTGAGCGAGCCGCCTGCCTCTCCACCGGCAAGGAAGCCCTGGGACCTCCGGATTCGGGCTGCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 72 bp GCGCAATGCGTTATGGTCGGGAGCGGGGACTCCTGCTaGTGGTGCGAGGAAGGGCCCATGCCGGCTCCGGTA +
Preference number: 6 (lower is better)
Translates to: AQCVMVGSGDSC*WCEEGPMPAPV
Trigger: TACCGGAGCCGGCATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 72 bp ACATCACATTTGCGCCTTCTCCAGAACATGAGGGGATaGCGCCCCCGGCCGCCGGGTCCTGGGCTCTGGCGC +
Preference number: 6 (lower is better)
Translates to: TSHLRLLQNMRG*RPRPPGPGLWR
Trigger: GCGCCAGAGCCCAGGACCCGGCGGCCGGGGGCGCCATCCCCTCATGTTCTGGAGAAGGCGCAAATGTGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CAA 90 bp GCCTCTGAGTCCATCTCGTGCAGGTTCCGGCGGGACGCGCTCAAGTaGCTGAGCGGCCGCATGACGCCCCCGTTGTACCTGCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: ASESISCRFRRDALK*LSGRMTPPLYLQLL
Trigger: GAGCAGCTGCAGGTACAACGGGGGCGTCATGCGGCCGCTCAGCAACTTGAGCGCGTCCCGCCGGAACCTGCACGAGATGGACTCAGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS GCA 72 bp CTGCAGGGAGACCAAGCGGTGGTGCACCCTGCGCAATaGGTTATGGTCGGGAGCGGGGACTCCTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LQGDQAVVHPAQ*VMVGSGDSCCW
Trigger: CCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCACCGCTTGGTCTCCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 72 bp GACTGCTGCGCGTACTGCTGCCGGAGCGCACTGGCATaGCTGGACGGCGTCAGCTCGCTCACATTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: DCCAYCCRSALA*LDGVSSLTLSW
Trigger: CCAGCTCAATGTGAGCGAGCTGACGCCGTCCAGCCATGCCAGTGCGCTCCGGCAGCAGTACGCGCAGCAGTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS CCA 72 bp GAGACCAAGCGGTGGTGCACCCTGCGCAATGCGTTATaGTCGGGAGCGGGGACTCCTGCTGCTGGTGCGAGG +
Preference number: 6 (lower is better)
Translates to: ETKRWCTLRNAL*SGAGTPAAGAR
Trigger: CCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCACCGCTTGGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CAA 72 bp TCCATCTCGTGCAGGTTCCGGCGGGACGCGCTCAAGTaGCTGAGCGGCCGCATGACGCCCCCGTTGTACCTG +
Preference number: 6 (lower is better)
Translates to: SISCRFRRDALK*LSGRMTPPLYL
Trigger: CAGGTACAACGGGGGCGTCATGCGGCCGCTCAGCAACTTGAGCGCGTCCCGCCGGAACCTGCACGAGATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS GCA 72 bp CTCCTTCTTGAGTCCTTGGCTGGCAGGAGCGAGTCCTaGAGGCGGGGGCCCGAATGCTCAGGGTATCGCCGA +
Preference number: 6 (lower is better)
Translates to: LLLESLAGRSES*RRGPECSGYRR
Trigger: TCGGCGATACCCTGAGCATTCGGGCCCCCGCCTGCAGGACTCGCTCCTGCCAGCCAAGGACTCAAGAAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512927.2
CDS CCA 72 bp CAATGCGTTATGGTCGGGAGCGGGGACTCCTGCTGCTaGTGCGAGGAAGGGCCCATGCCGGCTCCGGTAGAA +
Preference number: 6 (lower is better)
Translates to: QCVMVGSGDSCC*CEEGPMPAPVE
Trigger: TTCTACCGGAGCCGGCATGGGCCCTTCCTCGCACCAGCAGCAGGAGTCCCCGCTCCCGACCATAACGCATTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CAA 72 bp TACCTGCAGCTGCTCATGGCTATTTCGGTGAAGGGGTaGCTCTCGCGGCGCGCCTGGGGCTGGTGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: YLQLLMAISVKG*LSRRAWGWWCW
Trigger: CCAGCACCACCAGCCCCAGGCGCGCCGCGAGAGCAACCCCTTCACCGAAATAGCCATGAGCAGCTGCAGGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000673685.1
CDS GCA 72 bp TGTTCTGGTTTTTCTTTTTGCTGGACTTGGTGCCACTaGTGCTGCCGTGCCCGCTCCCGCCACCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: CSGFSFCWTWCH*CCRARSRHRRR
Trigger: GCGGCGGCGGTGGCGGGAGCGGGCACGGCAGCAGCAGTGGCACCAAGTCCAGCAAAAAGAAAAACCAGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS GCA 72 bp GTTAAAGCTGCAGGGAGACCAAGCGGTGGTGCACCCTaGGCAATGCGTTATGGTCGGGAGCGGGGACTCCTG +
Preference number: 6 (lower is better)
Translates to: VKAAGRPSGGAP*AMRYGRERGLL
Trigger: CAGGAGTCCCCGCTCCCGACCATAACGCATTGCGCAGGGTGCACCACCGCTTGGTCTCCCTGCAGCTTTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS TCA 72 bp CTCCCTGTGGGCTCGTGGGCTCGCTGGCTTCAGGAGTaGAGCTGCAGACCTTTCGCGGTGAGTGTTACAGCT +
Preference number: 6 (lower is better)
Translates to: LPVGSWARWLQE*SCRPFAVSVTA
Trigger: AGCTGTAACACTCACCGCGAAAGGTCTGCAGCTTCACTCCTGAAGCCAGCGAGCCCACGAGCCCACAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503706.5
ENST00000505491.1
CDS GCA 72 bp GGCGGCGGCTGCTCTGGGAAGAAGCCGCGCTGGAACTaGAATGGGGTTTCCATGTCAGGGCTGTTAAAGCTG +
Preference number: 6 (lower is better)
Translates to: GGGCSGKKPRWN*NGVSMSGLLKL
Trigger: CAGCTTTAACAGCCCTGACATGGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCCCAGAGCAGCCGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS CAA 72 bp GCGCTCAAGTTGCTGAGCGGCCGCATGACGCCCCCGTaGTACCTGCAGCTGCTCATGGCTATTTCGGTGAAG +
Preference number: 6 (lower is better)
Translates to: ALKLLSGRMTPP*YLQLLMAISVK
Trigger: CTTCACCGAAATAGCCATGAGCAGCTGCAGGTACAACGGGGGCGTCATGCGGCCGCTCAGCAACTTGAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS CAA 90 bp GAAGGGCCCATGCCGGCTCCGGTAGAATCCAGGCGGCGAGTCCGATaGGTTGGGCGCACCAAAACAATGGGCATGACATCACATTTGCGC +
Preference number: 6 (lower is better)
Translates to: EGPMPAPVESRRRVR*VGRTKTMGMTSHLR
Trigger: GCGCAAATGTGATGTCATGCCCATTGTTTTGGTGCGCCCAACCAATCGGACTCGCCGCCTGGATTCTACCGGAGCCGGCATGGGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS CCA 72 bp TCTTCTAGCTACTCTCTGATGAAGTTGGTGGTGCTGTaGAAGAGGACCGCCGCCTCCTGGACGAGGACCGGG +
Preference number: 6 (lower is better)
Translates to: SSSYSLMKLVVL*KRTAASWTRTG
Trigger: CCCGGTCCTCGTCCAGGAGGCGGCGGTCCTCTTCCACAGCACCACCAACTTCATCAGAGAGTAGCTAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS CCA 72 bp CGGCTGCTCTGGGAAGAAGCCGCGCTGGAACTGCAATaGGGTTTCCATGTCAGGGCTGTTAAAGCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: RLLWEEAALELQ*GFHVRAVKAAG
Trigger: CCCTGCAGCTTTAACAGCCCTGACATGGAAACCCCATTGCAGTTCCAGCGCGGCTTCTTCCCAGAGCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000673685.1
CDS CAA 72 bp ATGCCGGCTCCGGTAGAATCCAGGCGGCGAGTCCGATaGGTTGGGCGCACCAAAACAATGGGCATGACATCA +
Preference number: 6 (lower is better)
Translates to: MPAPVESRRRVR*VGRTKTMGMTS
Trigger: TGATGTCATGCCCATTGTTTTGGTGCGCCCAACCAATCGGACTCGCCGCCTGGATTCTACCGGAGCCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS TCA 72 bp TCCTGGACGAGGACCGGGACCGCTCAGCATTGTAAGTaGCGTGCTTGTCGTAGCTCTCCATCTGAGCCTCAA +
Preference number: 6 (lower is better)
Translates to: SWTRTGTAQHCK*RACRSSPSEPQ
Trigger: TTGAGGCTCAGATGGAGAGCTACGACAAGCACGTCACTTACAATGCTGAGCGGTCCCGGTCCTCGTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS CCA 72 bp CCAGCTTGTAGCCGATGTTCTGGTTTTTCTTTTTGCTaGACTTGGTGCCACTGCTGCTGCCGTGCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: PACSRCSGFSFC*TWCHCCCRARS
Trigger: GGAGCGGGCACGGCAGCAGCAGTGGCACCAAGTCCAGCAAAAAGAAAAACCAGAACATCGGCTACAAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS CCA 72 bp GCCTCAATGAAATCTCTCTGCTGCTGCCTGATGGTCTaGCTTATGAGCCCAGGGAGGGCGTGGATGCTACCA +
Preference number: 6 (lower is better)
Translates to: ASMKSLCCCLMV*LMSPGRAWMLP
Trigger: TGGTAGCATCCACGCCCTCCCTGGGCTCATAAGCCAGACCATCAGGCAGCAGCAGAGAGATTTCATTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS CAA 72 bp GTGAGTGTTACAGCTCTTAAGGCGGTGCATCTGGAGTaGTTCATTCCTCCCTGTGGGCTCGTGGGCTCGCTG +
Preference number: 6 (lower is better)
Translates to: VSVTALKAVHLE*FIPPCGLVGSL
Trigger: CAGCGAGCCCACGAGCCCACAGGGAGGAATGAACAACTCCAGATGCACCGCCTTAAGAGCTGTAACACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503706.5
ENST00000505491.1
CDS CCA 72 bp GGCTCCGGTAGAATCCAGGCGGCGAGTCCGATTGGTTaGGCGCACCAAAACAATGGGCATGACATCACATTT +
Preference number: 6 (lower is better)
Translates to: GSGRIQAASPIG*AHQNNGHDITF
Trigger: AAATGTGATGTCATGCCCATTGTTTTGGTGCGCCCAACCAATCGGACTCGCCGCCTGGATTCTACCGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS TCA 72 bp GCTGGCTTCAGGAGTGAAGCTGCAGACCTTTCGCGGTaGGTGTTACAGCTCATAAAGGCAGTGTGGACCCAA +
Preference number: 6 (lower is better)
Translates to: AGFRSEAADLSR*VLQLIKAVWTQ
Trigger: TTGGGTCCACACTGCCTTTATGAGCTGTAACACTCACCGCGAAAGGTCTGCAGCTTCACTCCTGAAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503706.5
ENST00000505491.1
CDS CAA 72 bp GTTGATCATGGTACTGCGTCCGGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGAACGAAGCCCCGGACC +
Preference number: 6 (lower is better)
Translates to: VDHGTASGIGGF*VSLTSRTKPRT
Trigger: GGTCCGGGGCTTCGTTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCCGGACGCAGTACCATGATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503706.5
ENST00000505491.1
CDS TCA 72 bp AATGCGGCCTTGGTGAAATGCGCCAGTGGACAAAGCTaGAGATCGAGTCCACTGAGAATTCCGGCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: NAALVKCASGQS*RSSPLRIPAGS
Trigger: TGAACCTGCCGGAATTCTCAGTGGACTCGATCTTCAGCTTTGTCCACTGGCGCATTTCACCAAGGCCGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS TCA 72 bp ACACCCTCGTTCTGCAACCAGGAGTCCCGCTCCATTTaGAGCTCAAATTTGCCTCAAAGCGGTAAATGCGGC +
Preference number: 6 (lower is better)
Translates to: TPSFCNQESRSI*SSNLPQSGKCG
Trigger: GCCGCATTTACCGCTTTGAGGCAAATTTGAGCTTCAAATGGAGCGGGACTCCTGGTTGCAGAACGAGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512927.2
CDS TCA 72 bp GCTCTTAAGGTGGCGCCGTCTGGAGTTTGTTCCTTCTaGTGTTCGGATGTGTTCGGAGTTTCTTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: ALKVAPSGVCSF*CSDVFGVSSFW
Trigger: CCAGAAGGAAGAAACTCCGAACACATCCGAACATCAGAAGGAACAAACTCCAGACGGCGCCACCTTAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503706.5
ENST00000505491.1
CDS TCA 72 bp AATGCGCCAGTGGACAAAGCTGAAGATCGAGTCCACTaGGAATTCCGGCAGGTTCACCGGGAGAAACTGTTT +
Preference number: 6 (lower is better)
Translates to: NAPVDKAEDRVH*EFRQVHREKLF
Trigger: AAACAGTTTCTCCCGGTGAACCTGCCGGAATTCTCAGTGGACTCGATCTTCAGCTTTGTCCACTGGCGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS CCA 72 bp CATCCTGTTGATCATGGTACCTGTATTTCCCTGGCGTaGTACACGATGATCAGACCGAGCAGGATGATCGTG +
Preference number: 6 (lower is better)
Translates to: HPVDHGTCISLA*YTMIRPSRMIV
Trigger: CACGATCATCCTGCTCGGTCTGATCATCGTGTACCACGCCAGGGAAATACAGGTACCATGATCAACAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507750.5
ENST00000610748.4
CDS CCA 72 bp CAAAGCGGTAAATGCGGCCTTGGTGAAATGCGCCAGTaGACAAAGCTGAAGATCGAGTCCACTGAGAATTCC +
Preference number: 6 (lower is better)
Translates to: QSGKCGLGEMRQ*TKLKIESTENS
Trigger: GGAATTCTCAGTGGACTCGATCTTCAGCTTTGTCCACTGGCGCATTTCACCAAGGCCGCATTTACCGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512097.9
ENST00000512927.2
CDS CAA 72 bp GTTAACTTATTCTCTTCTAGCTACTCTCTGATGAAGTaGGTGGTGCTGTGGAAGAGGACCGCCGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VNLFSSSYSLMK*VVLWKRTAASW
Trigger: CCAGGAGGCGGCGGTCCTCTTCCACAGCACCACCAACTTCATCAGAGAGTAGCTAGAAGAGAATAAGTTAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000673685.1
CDS TCA 72 bp AGAATCTCGTTCTGCAACCAGGAGTCCCGCTCCATTTaGAGCTCAAATTTGCCTCAAAGCGGTAAATGCGGC +
Preference number: 6 (lower is better)
Translates to: RISFCNQESRSI*SSNLPQSGKCG
Trigger: GCCGCATTTACCGCTTTGAGGCAAATTTGAGCTTCAAATGGAGCGGGACTCCTGGTTGCAGAACGAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512097.9
CDS GCA 72 bp GATGTTCTGGGTCTTTGCCAAGTCCACCAAAGTGTTTaGTTGGTCATTCAGTTTCCTCTGCTCCATTTTTAC +
Preference number: 6 (lower is better)
Translates to: DVLGLCQVHQSV*LVIQFPLLHFY
Trigger: GTAAAAATGGAGCAGAGGAAACTGAATGACCAAGCAAACACTTTGGTGGACTTGGCAAAGACCCAGAACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000506812.2
ENST00000507750.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000632892.1
ENST00000673685.1
CDS CAA 72 bp GTTCTGGGTCTTTGCCAAGTCCACCAAAGTGTTTGCTaGGTCATTCAGTTTCCTCTGCTCCATTTTTACACT +
Preference number: 6 (lower is better)
Translates to: VLGLCQVHQSVC*VIQFPLLHFYT
Trigger: AGTGTAAAAATGGAGCAGAGGAAACTGAATGACCAAGCAAACACTTTGGTGGACTTGGCAAAGACCCAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000264773.7
ENST00000503706.5
ENST00000506812.2
ENST00000507750.5
ENST00000512097.9
ENST00000610748.4
ENST00000631899.2
ENST00000632892.1
ENST00000673685.1
CDS CAA 90 bp CAAACAAAGCAGTTGATAAATTCCAGAGCAGAATCCTTTGTAACTTaGCTGGGGGTCATAGTCTTCATCCCAAGGATCATGGTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: QTKQLINSRAESFVT*LGVIVFIPRIMVSC
Trigger: ACAGCTCACCATGATCCTTGGGATGAAGACTATGACCCCCAGCAAAGTTACAAAGGATTCTGCTCTGGAATTTATCAACTGCTTTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506812.2
ENST00000632892.1
CDS CAA 90 bp GTTCCTGGGCATATAGTCATTAAAGTCTTCATAACAAAACGTGTATaGAAGTTTATCTTATTAAGTGCTCCAATGCTTCTAGAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: VPGHIVIKVFITKRV*KFILLSAPMLLEEA
Trigger: TGCCTCCTCTAGAAGCATTGGAGCACTTAATAAGATAAACTTCAATACACGTTTTGTTATGAAGACTTTAATGACTATATGCCCAGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264773.7
ENST00000512097.9
ENST00000631899.2
ENST00000673685.1