RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNK9 (Homo sapiens)

Ensembl gene IDs: ENSG00000169427

Ensembl transcript IDs: ENST00000303015.2, ENST00000519923.1, ENST00000520439.3, ENST00000522317.5, ENST00000523477.2, ENST00000523653.1, ENST00000647605.1, ENST00000648164.1, ENST00000648481.1, ENST00000649473.1, ENST00000649696.1, ENST00000650269.1

Found 1033 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTCTCGCGATGGTCCTTCCGTCTGGGGCACTGCCCAGTGCTTGCTaGTCCTGTGGCCGGGGCCATAGAAGGTTTGCTCCCTGGTGCGGT +
Preference number: 1 (lower is better)
Translates to: ILAMVLPSGALPSAC*SCGRGHRRFAPWCG
Trigger: ACCGCACCAGGGAGCAAACCTTCTATGGCCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATCGCGAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR TCA 90 bp CTGAGGTTCAGCGAGGGTAAGCAGCAGGACCACCTGGCATCTGTATaGCTCAGAGGCACTGAGCCTGGAAACAGACCCAGTCCCCGCCCC +
Preference number: 1 (lower is better)
Translates to: LRFSEGKQQDHLASV*LRGTEPGNRPSPRP
Trigger: GGGGCGGGGACTGGGTCTGTTTCCAGGCTCAGTGCCTCTGAGTCATACAGATGCCAGGTGGTCCTGCTGCTTACCCTCGCTGAACCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp AAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTaGGCTTCCTGTCTATGTGTAGCTGGACCATCCCCACAGTTGTGT +
Preference number: 1 (lower is better)
Translates to: KSPTGLRGPSHRAFL*ASCLCVAGPSPQLC
Trigger: ACACAACTGTGGGGATGGTCCAGCTACACATAGACAGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp AGTCTGGTGCCATCCCTGTACCGGCCTTATGAGAAATACCTGGCGTaGCAGCTTCCAGCCCTGTTGTATGGGGCACACTCCACCCTGCCA +
Preference number: 1 (lower is better)
Translates to: SLVPSLYRPYEKYLA*QLPALLYGAHSTLP
Trigger: TGGCAGGGTGGAGTGTGCCCCATACAACAGGGCTGGAAGCTGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGGGATGGCACCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp CCCATAGTCTGGTGCCATCCCTGTACCGGCCTTATGAGAAATACCTaGCGTGGCAGCTTCCAGCCCTGTTGTATGGGGCACACTCCACCC +
Preference number: 1 (lower is better)
Translates to: PIVWCHPCTGLMRNT*RGSFQPCCMGHTPP
Trigger: GGGTGGAGTGTGCCCCATACAACAGGGCTGGAAGCTGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGGGATGGCACCAGACTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp CATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGATaGTCCTTCCGTCTGGGGCACTGCCCAGTGCTTGCTGCTCCTGTG +
Preference number: 1 (lower is better)
Translates to: HLGKMPDISVPLFSR*SFRLGHCPVLAAPV
Trigger: CACAGGAGCAGCAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp GTGATGTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTaGTCTTGGTCTCACATCTGTCCCGGGAAAACCACTGCAGAGATG +
Preference number: 1 (lower is better)
Translates to: VMCSFGVGILSALSP*SWSHICPGKTTAEM
Trigger: CATCTCTGCAGTGGTTTTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp ACCACTAAGGGTAGGCGATTGAAGGCTGAGCGTGATGTGCAGCTTTaGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCA +
Preference number: 1 (lower is better)
Translates to: TTKGRRLKAERDVQL*GGYPLSSVSVVLVS
Trigger: TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACATCACGCTCAGCCTTCAATCGCCTACCCTTAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR TCA 90 bp CACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTaGGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAGT +
Preference number: 1 (lower is better)
Translates to: HLRRQKSRSRVRLWQ*DPASTDASLECAVS
Trigger: ACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp ACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTaGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTG +
Preference number: 1 (lower is better)
Translates to: TPRHAGSESVYERDS*LVRLTHLSCEAVDL
Trigger: CAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR TCA 90 bp GCCCTGTTGTATGGGGCACACTCCACCCTGCCAGGCAGGTGCCGTTaGATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTG +
Preference number: 1 (lower is better)
Translates to: ALLYGAHSTLPGRCR*ITSAMMTSFLLIDL
Trigger: CAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATTCAACGGCACCTGCCTGGCAGGGTGGAGTGTGCCCCATACAACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR TCA 90 bp CCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTTGGATGAATaGGTCGGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTG +
Preference number: 1 (lower is better)
Translates to: PGTLSSIQTVLSLDE*VGSQVDLAGLESQL
Trigger: CAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCCGACTCATTCATCCAAAGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR TCA 90 bp GTCTGCTGGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTaGGTTTCAGAGGAGGATGGGCCTGTATTTCCCTTTGGCCTGCTC +
Preference number: 1 (lower is better)
Translates to: VCWEGRRRSMLHAQM*VSEEDGPVFPFGLL
Trigger: GAGCAGGCCAAAGGGAAATACAGGCCCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCCAGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR GCA 90 bp TGGGGCACACTCCACCCTGCCAGGCAGGTGCCGTTGAATCACCAGTaGTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCC +
Preference number: 1 (lower is better)
Translates to: WGTLHPARQVPLNHQ*YDDQFSSHRSGLVS
Trigger: GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATTCAACGGCACCTGCCTGGCAGGGTGGAGTGTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp GAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATaGGCCTGTATTTCCCTTTGGCCTGCTCTGTCTGGCTGGAAAGGT +
Preference number: 1 (lower is better)
Translates to: EEIHASCSDVSFRGG*ACISLWPALSGWKG
Trigger: ACCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCCCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR TCA 90 bp AGTTTCCTGATGACATTCCCATCACGGGGCCCAACTTCTTCAGAGTaGCATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACC +
Preference number: 1 (lower is better)
Translates to: SFLMTFPSRGPTSSE*HHKYAPIVWCHPCT
Trigger: GGTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAAGTTGGGCCCCGTGATGGGAATGTCATCAGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR TCA 90 bp AAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGCAGCTTTGGGGTGGGTATCCTCTCA +
Preference number: 1 (lower is better)
Translates to: KEKGVRSETPLRVGD*RLSVMCSFGVGILS
Trigger: TGAGAGGATACCCACCCCAAAGCTGCACATCACGCTCAGCCTTCAATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR GCA 90 bp ATTCCCATCACGGGGCCCAACTTCTTCAGAGTGACATCACAAGTATaGTCCCATAGTCTGGTGCCATCCCTGTACCGGCCTTATGAGAAA +
Preference number: 1 (lower is better)
Translates to: IPITGPNFFRVTSQV*SHSLVPSLYRPYEK
Trigger: TTTCTCATAAGGCCGGTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAAGTTGGGCCCCGTGATGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR GCA 90 bp TCTTCTCATAGATCTGGATTGGTTTCCAGGGATGGTGCAGAGGCGTaGATTGAGTTACCCTGTTTCCACTTCAGCAAGTTAAGACGTGCC +
Preference number: 1 (lower is better)
Translates to: SSHRSGLVSRDGAEA*IELPCFHFSKLRRA
Trigger: GGCACGTCTTAACTTGCTGAAGTGGAAACAGGGTAACTCAATGCACGCCTCTGCACCATCCCTGGAAACCAATCCAGATCTATGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp CTCCTTCGAAGGCCCTGTGTCCTGGACGAAGGGGAAATTTCAACATaGGATGTAGCATTAAAGTACATGCACAGCCTTTTCAGAGGAGTC +
Preference number: 1 (lower is better)
Translates to: LLRRPCVLDEGEIST*DVALKYMHSLFRGV
Trigger: GACTCCTCTGAAAAGGCTGTGCATGTACTTTAATGCTACATCCCATGTTGAAATTTCCCCTTCGTCCAGGACACAGGGCCTTCGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR GCA 90 bp AAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTaGACACAGAAGCACACACACAACACACACACAGTCACTCAGTCC +
Preference number: 1 (lower is better)
Translates to: KKTEYLILPVLSRHT*TQKHTHNTHTVTQS
Trigger: GGACTGAGTGACTGTGTGTGTGTTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp TTTCCACTTCAGCAAGTTAAGACGTGCCTCAATCACGGTGATAAGTaGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTC +
Preference number: 1 (lower is better)
Translates to: FPLQQVKTCLNHGDK*PFGQDARHLSAFIL
Trigger: GAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTGCTGAAGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 90 bp ATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTaGTTTCCAGGGATGGTGCAGAGGCGTGCATTGAGTTACCCTGTT +
Preference number: 1 (lower is better)
Translates to: ITSAMMTSFLLIDLD*FPGMVQRRALSYPV
Trigger: AACAGGGTAACTCAATGCACGCCTCTGCACCATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR GCA 90 bp CCAGTAAACCGTGTTCCTTCTGAGTATAGCCAAGGTCCATTTCCATaGAAGAGCCATGAACTTCATTTACAAAAGAGGAATGGGAGGATG +
Preference number: 1 (lower is better)
Translates to: PVNRVPSEYSQGPFP*KSHELHLQKRNGRM
Trigger: CATCCTCCCATTCCTCTTTTGTAAATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTGGCTATACTCAGAAGGAACACGGTTTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR TCA 90 bp GTTCCCAGTAGGCCAAGACATAGCTCCTTGCCTCTAAACTCTTCCTaGGACCAATGTGAACTTTACCCTATTTACAAATCAAATGCAATT +
Preference number: 1 (lower is better)
Translates to: VPSRPRHSSLPLNSS*DQCELYPIYKSNAI
Trigger: AATTGCATTTGATTTGTAAATAGGGTAAAGTTCACATTGGTCTCAGGAAGAGTTTAGAGGCAAGGAGCTATGTCTTGGCCTACTGGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR GCA 90 bp TGTAGCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTaGTTTGACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCG +
Preference number: 1 (lower is better)
Translates to: CSCIYYKHHIHYLSR*FDSQGDVNNNSSKA
Trigger: CGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGAGAGCCCGACGGGCTTaGGGGGACCCTCACATCGAG +
Preference number: 2 (lower is better)
Translates to: AERARRACGDPHIERFSGRARRA*GDPHIE
Trigger: CTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGCCTGCACGGTCCTGTaGATGGCAGAGGCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: RARRACGDPHIERFSGLPACTVL*MAEAGP
Trigger: AGGACCAGCCTCTGCCATTCACAGGACCGTGCAGGC...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCTGGGGCACTGCCCAGTaGTTGCTGCTCCTGTGGCCG +
Preference number: 2 (lower is better)
Translates to: SSVARPLRGCLGYASEPGWGTAQ*LLLLWP
Trigger: CGGCCACAGGAGCAGCAAGCACTGGGCAGTGCCCCA...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CCGGGCCCTGCAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGAGAAGGTTTGCTCCCTaGTGCGGTCGCTCACAACCA +
Preference number: 2 (lower is better)
Translates to: PGPAGGPGERVADGETPRRRFAP*CGRSQP
Trigger: TGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCT...CCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCAGGGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGGCTCCCATAGTCTGGTaGCATCCCTGTACCGGCCTT +
Preference number: 2 (lower is better)
Translates to: AERARRACGDPHIERFSGAPIVW*HPCTGL
Trigger: AAGGCCGGTACAGGGATGGCACCAGACTATGGGAGC...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp GAGGCTGCCTCACTTACAGAAGGAGAGAGCTGTCCCCGTCCTCTGTaGGGGCCGCCTGCACGGTCCTGTGAATGGCAGAGGCTGGTCCTA +
Preference number: 2 (lower is better)
Translates to: EAASLTEGESCPRPL*GPPARSCEWQRLVL
Trigger: TAGGACCAGCCTCTGCCATTCACAGGACCGTGCAGGCGGCCCCAACAGAGGACGGGGACAGCTCTCTCCTTCTGTAAGTGAGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp CCGGGCCCTGCAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGCACCAAAAGGAAGTGTaGGATGCTCTGTCTCCACCT +
Preference number: 2 (lower is better)
Translates to: PGPAGGPGERVADGETPRHQKEV*DALSPP
Trigger: AGGTGGAGACAGAGCATCTCACACTTCCTTTTGGTG...CCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCAGGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGATCGCACTGCCCAGTGCTTaGTGCTCCTGTGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: ERHGQRRRGRSLRGQILIALPSA*CSCGRG
Trigger: GCCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGC...GATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCTGCCCAGTGCTTGCTaGTCCTGTGGCCGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: AFKRLSGLCQRARHLELHLPSAC*SCGRGH
Trigger: ATGGCCCCGGCCACAGGAGCAGCAAGCACTGGGCAG...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTCAAGCTAAGATGGTTTaGGTCGTCTTGCCCACCCGC +
Preference number: 2 (lower is better)
Translates to: RARRACGDPHIERFSGLPQAKMV*VVLPTR
Trigger: GCGGGTGGGCAAGACGACCCAAACCATCTTAGCTTG...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGATCGCCTGCACGGTCCTGTaGATGGCAGAGGCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: ERHGQRRRGRSLRGQILIACTVL*MAEAGP
Trigger: AGGACCAGCCTCTGCCATTCACAGGACCGTGCAGGC...GATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCCCATATTCTACAGCCTaGACTACCCCACCACCTCCC +
Preference number: 2 (lower is better)
Translates to: SSVARPLRGCLGYASEPGPYSTA*TTPPPP
Trigger: GGGAGGTGGTGGGGTAGTTCAGGCTGTAGAATATGG...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTCTGCCCAGTGCTTGCTaGTCCTGTGGCCGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: GKPHGTQALSLFMNAILGLPSAC*SCGRGH
Trigger: ATGGCCCCGGCCACAGGAGCAGCAAGCACTGGGCAG...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGGATGGTGCAGAGGCGTaGATTGAGTTACCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: AERARRACGDPHIERFSGDGAEA*IELPCF
Trigger: GAAACAGGGTAACTCAATGCACGCCTCTGCACCATC...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGGATGGTCCTTCCGTCTaGGGCACTGCCCAGTGCTTG +
Preference number: 2 (lower is better)
Translates to: RNPEAVFGFGSETQHPRTDGPSV*GTAQCL
Trigger: CAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATC...CGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTTGTTCGGCTTTGGCAGTaGGACCCAGCATCCACGGAC +
Preference number: 2 (lower is better)
Translates to: GLCQRARHLELHPNRSLFVRLWQ*DPASTD
Trigger: GTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAAC...AAAGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAGTTCGGCTTTGGCAGTaGGACCCAGCATCCACGGAC +
Preference number: 2 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSVRLWQ*DPASTD
Trigger: GTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAAC...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp AGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGAGGTTGTCTGGGCTATaGCAGCGAGCCAGGCACCTT +
Preference number: 2 (lower is better)
Translates to: RNPEAVFGFGSETQHPRTRLSGL*QRARHL
Trigger: AAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCT...CGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCGATGGTCCTTCCGTCTaGGGCACTGCCCAGTGCTTG +
Preference number: 2 (lower is better)
Translates to: GSVRCSVSTSKLESNGETDGPSV*GTAQCL
Trigger: CAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATC...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp AGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: RNPEAVFGFGSETQHPRTLRVGD*RLSVMC
Trigger: GCACATCACGCTCAGCCTTCAATCGCCTACCCTTAG...CGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGGCCAAAAGCAGGCTATaGTGTGTGATGGGAAAGAAA +
Preference number: 2 (lower is better)
Translates to: AERARRACGDPHIERFSGAKSRL*CVMGKK
Trigger: TTTCTTTCCCATCACACATCATAGCCTGCTTTTGGC...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGATCCCACAGCAGGGACACTaGGTCACGATAGCAGCACTG +
Preference number: 2 (lower is better)
Translates to: ERHGQRRRGRSLRGQILIPQQGH*VTIAAL
Trigger: CAGTGCTGCTATCGTGACGCAGTGTCCCTGCTGTGG...GATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp TGGGAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGAGGCTGAGCGTGATGTaGAGCTTTGGGGTGGGTATC +
Preference number: 2 (lower is better)
Translates to: WERHGQRRRGRSLRGQILRLSVM*SFGVGI
Trigger: GATACCCACCCCAAAGCTGCACATCACGCTCAGCCT...CAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCATGAGTGGAAGGGCTTaGCAGTCTCTACTCCTCGTT +
Preference number: 2 (lower is better)
Translates to: SSVARPLRGCLGYASEPGMSGRA*QSLLLV
Trigger: AACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCAT...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCTCCAGCCCTGTTGTATaGGGCACACTCCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: GSQVDLAGLESQLRLDWFSSPVV*GTLHPA
Trigger: GGCAGGGTGGAGTGTGCCCCATACAACAGGGCTGGA...GAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp TCAAAGCTGGAGAGCAACGGGGAGACCTTCCAGGTAGTGGGAACGGCACGGGCATGTGCAGCTTTGGGGTaGGTATCCTCTCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: SKLESNGETFQVVGTARACAALG*VSSQLC
Trigger: ACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACA...TGCCCGTGCCGTTCCCACTACCTGGAAGGTCTCCCCGTTGCTCTCCAGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCAGTGTTTCAGCCCATTaGCCCAAATGCTTGGGACTG +
Preference number: 2 (lower is better)
Translates to: SSVARPLRGCLGYASEPGSVSAH*PKCLGL
Trigger: CAGTCCCAAGCATTTGGGCCAATGGGCTGAAACACT...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTaGGTCTCACATCTGTCCCGGGAAAACCACTGCAGAGATGATGGG +
Preference number: 2 (lower is better)
Translates to: VQLWGGYPLSSVSVV*VSHLSRENHCRDDG
Trigger: CCCATCATCTCTGCAGTGGTTTTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCCCTGTACCGGCCTTATaGGAAATACCTGGCGTGGCA +
Preference number: 2 (lower is better)
Translates to: GSVRCSVSTSKLESNGETPVPAL*EIPGVA
Trigger: TGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGG...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATGTCACAGCTGAGGCTTaGCTGGTTCCTTACAGCCAC +
Preference number: 2 (lower is better)
Translates to: AFKRLSGLCQRARHLELHVTAEA*LVPYSH
Trigger: GTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGAC...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR-3UTR GCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCATCCCGGGAAAACCACTaGAGAGATGATGGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSSRENH*RDDGVG
Trigger: ACCCACCCCATCATCTCTGCAGTGGTTTTCCCGGGA...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCAGGCTGAGCGTGATGTaGAGCTTTGGGGTGGGTATC +
Preference number: 2 (lower is better)
Translates to: GSVRCSVSTSKLESNGETRLSVM*SFGVGI
Trigger: GATACCCACCCCAAAGCTGCACATCACGCTCAGCCT...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GCAGAGGCTGGTCCTAGGCGTGCGAGATGCCAGGGCCTGAGCAGTATCCACACCATGATGATGAATGAGTaGAAGGGCTTGGCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: AEAGPRRARCQGLSSIHTMMMNE*KGLAVS
Trigger: AGAGACTGCCAAGCCCTTCCACTCATTCATCATCAT...GGTGTGGATACTGCTCAGGCCCTGGCATCTCGCACGCCTAGGACCAGCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGATCTATGCTCCCATAGTCTaGTGCCATCCCTGTACCGGC +
Preference number: 2 (lower is better)
Translates to: ERHGQRRRGRSLRGQILIYAPIV*CHPCTG
Trigger: GCCGGTACAGGGATGGCACCAGACTATGGGAGCATA...GATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAATTGGCCTGCTCTGTCTaGCTGGAAAGGTGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: GYPLSSVSVVLVSHLSRELACSV*LERWGK
Trigger: TTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAA...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTAGAAGAGCGTGTGCTTaGCTCTCTCAAGGCCCCAGA +
Preference number: 2 (lower is better)
Translates to: GKPHGTQALSLFMNAILGRRACA*LSQGPR
Trigger: TCTGGGGCCTTGAGAGAGGCAAGCACACGCTCTTCT...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTCTGTCTATGTGTAGCTaGACCATCCCCACAGTTGTG +
Preference number: 2 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSLSMCS*TIPTVV
Trigger: CACAACTGTGGGGATGGTCCAGCTACACATAGACAG...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTAGAAGGTTTGCTCCCTaGTGCGGTCGCTCACAACCA +
Preference number: 2 (lower is better)
Translates to: GKPHGTQALSLFMNAILGRRFAP*CGRSQP
Trigger: TGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCT...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTGGGAGATCTCGTTaGGGCCTTGAGACAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LAGLESQLRLDWFLTATSSGRSR*GLETGQ
Trigger: CTGGCCTGTCTCAAGGCCCCAACGAGATCTCCCAGA...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp AGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGGCAGTTAGTTCCCCTTaGAGGTTGAGAACTGTCAAC +
Preference number: 2 (lower is better)
Translates to: RNPEAVFGFGSETQHPRTAVSSP*RLRTVN
Trigger: GTTGACAGTTCTCAACCTTCAAGGGGAACTAACTGC...CGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGGTGGCACTGCCCAGTGCTTaGTGCTCCTGTGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: AMMTSFLLIDLDWFPGMVALPSA*CSCGRG
Trigger: GCCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGC...CACCATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp AGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGTATTTCCCTTTGGCCTaGTCTGTCTGGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: RELQTGKPHGTQALSLFMYFPLA*SVWLER
Trigger: CCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATA...CATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCCTGTCTATGTGTAGCTaGACCATCCCCACAGTTGTG +
Preference number: 2 (lower is better)
Translates to: GSVRCSVSTSKLESNGETLSMCS*TIPTVV
Trigger: CACAACTGTGGGGATGGTCCAGCTACACATAGACAG...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGATCAGCAGGTCTTCCCTTTaGGGTCATCCCCTATTGAGA +
Preference number: 2 (lower is better)
Translates to: ERHGQRRRGRSLRGQILISRSSL*GHPLLR
Trigger: TCTCAATAGGGGATGACCCCAAAGGGAAGACCTGCT...GATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp TTTCTCTGGGCTTCCTGTCTATGTGTAGCTGGACCATCCCCACAGTaGTGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: FLWASCLCVAGPSPQ*CRGMSRAFAQHSRG
Trigger: ACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACACAACTGTGGGGATGGTCCAGCTACACATAGACAGGAAGCCCAGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp CCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTaGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGAAC +
Preference number: 2 (lower is better)
Translates to: PRHAGSESVYERDSW*VRLTHLSCEAVDLN
Trigger: GTTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR-3UTR TCA 90 bp CTCTTTCTAGGGAGCAAAGCCTCCTTTCTGGGAGATCTCGTTGGGGCCTTGAGACAGCAGAGGTCCACTTaGGAAGGCAGAAATCCCGAA +
Preference number: 2 (lower is better)
Translates to: LFLGSKASFLGDLVGALRQQRST*EGRNPE
Trigger: TTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTG...TCTCAAGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGCTCCCTAGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCGCTCTAGACACATTTTaGAAAGCGAGATCTGGATTT +
Preference number: 2 (lower is better)
Translates to: SSVARPLRGCLGYASEPGALDTF*KARSGF
Trigger: AAATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGC...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR-3UTR TCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTCGTTCTCTCTTTGGATaGATGAGTCGGCTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: GKPHGTQALSLFMNAILGRSLFG*MSRLSG
Trigger: ACCTGAGAGCCGACTCATTCATCCAAAGAGAGAACG...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR-3UTR TCA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGAGCGAGCCAGGCACCTTaGGCTCCATCCAAACCGTTC +
Preference number: 2 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRASQAP*APSKPF
Trigger: GAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGC...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGGCGAGGCAGTGGACTTaGACTTCTCAGACGATTTCC +
Preference number: 2 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKARQWT*TSQTIS
Trigger: GGAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGC...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTTGCAGGAGGGCCAGGTaGGAGAGTTGCAGACGGGGA +
Preference number: 2 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSCRRAR*ESCRRG
Trigger: TCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCA...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTTTACACGAGAAGCCTaGGGTTCAGCGAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: LAGLESQLRLDWFLTATSFTREA*GSARVS
Trigger: GCTTACCCTCGCTGAACCTCAGGCTTCTCGTGTAAA...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GTTCCTTCTGAGTATAGCCAAGGTCCATTTCCATGCAAGAGCCATGAACTTCATAGAGCCCGACGGGCTTaGGGGGACCCTCACATCGAG +
Preference number: 2 (lower is better)
Translates to: VPSEYSQGPFPCKSHELHRARRA*GDPHIE
Trigger: CTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT...ATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTGGCTATACTCAGAAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAGAAGGAGGAGATCCATaGTTCATGCTCAGATGTGAG +
Preference number: 2 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREEGGDP*FMLRCE
Trigger: CTCACATCTGAGCATGAAGCATGGATCTCCTCCTTC...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CTTCAGCAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGGTCCTTCCGTCTaGGGCACTGCCCAGTGCTTG +
Preference number: 2 (lower is better)
Translates to: LQQVKTCLNHGDKWPFGQDGPSV*GTAQCL
Trigger: CAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATC...TTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGATCAACCTCTGCCACTGCTaGTTAAGAGATGCTGAGGAT +
Preference number: 2 (lower is better)
Translates to: ERHGQRRRGRSLRGQILINLCHC*LRDAED
Trigger: ATCCTCAGCATCTCTTAACCAGCAGTGGCAGAGGTT...GATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCTTGAAAAGCGAGATCTaGATTTTTATCCGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: SSVARPLRGCLGYASEPGLKSEI*IFIRSW
Trigger: CCAGCTTCGGATAAAAATCCAGATCTCGCTTTTCAA...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR-3UTR CCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTAGTGTTTCAGCCCATTaGCCCAAATGCTTGGGACTG +
Preference number: 2 (lower is better)
Translates to: GKPHGTQALSLFMNAILGSVSAH*PKCLGL
Trigger: CAGTCCCAAGCATTTGGGCCAATGGGCTGAAACACT...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp AGCCCTGTTGTATGGGGCACACTCCACCCTGCCAGGCAGGTGCCGTaGAATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCT +
Preference number: 2 (lower is better)
Translates to: SPVVWGTLHPARQVP*NHQCYDDQFSSHRS
Trigger: AGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATTCAACGGCACCTGCCTGGCAGGGTGGAGTGTGCCCCATACAACAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTTCGGCTTTGGCAGTaGGACCCAGCATCCACGGAC +
Preference number: 2 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSVRLWQ*DPASTD
Trigger: GTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAAC...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp CTCCACCAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACCCAGGCAGGTGCCGTTaGATCACCAGTGCTATGATG +
Preference number: 2 (lower is better)
Translates to: LHQKCCHKKTVWTQFPDDPGRCR*ITSAMM
Trigger: CATCATAGCACTGGTGATTCAACGGCACCTGCCTGG...GTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAAAAGGTGGGGGAAAATaGGACCAAGAGACCAAGAAA +
Preference number: 2 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREKGGGK*DQETKK
Trigger: TTTCTTGGTCTCTTGGTCTCATTTTCCCCCACCTTT...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp ACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACCGGCCTTATGAGAGGTTTGCTCCCTGGTaGGGTCGCTCACAACCAAAA +
Preference number: 2 (lower is better)
Translates to: TSQVCSHSLVPSLYRPYERFAPW*GRSQPK
Trigger: TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCT...CTCATAAGGCCGGTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GAGGCGTGCATTGAGTTACCCTGTTTCCACTTCAGCAAGTTAAGACGTGCCTCACCTTTATTCTCGCGATaGTCCTTCCGTCTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: EACIELPCFHFSKLRRASPLFSR*SFRLGH
Trigger: GTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGG...TGAGGCACGTCTTAACTTGCTGAAGTGGAAACAGGGTAACTCAATGCACGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CTCCACCAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACCCTTTATTCTCGCGATaGTCCTTCCGTCTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: LHQKCCHKKTVWTQFPDDPLFSR*SFRLGH
Trigger: GTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGG...GTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGGCCTGTATTTCCCTTTaGCCTGCTCTGTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWACISL*PALSGW
Trigger: CCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGC...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCCCTGTACCGGCCTTATaGGAAATACCTGGCGTGGCA +
Preference number: 2 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPPVPAL*EIPGVA
Trigger: TGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGG...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGAGTCACAGCTGAGGCTTaGCTGGTTCCTTACAGCCAC +
Preference number: 2 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRVTAEA*LVPYSH
Trigger: GTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGAC...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACATCCAGCCCTGTTGTATaGGGCACACTCCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: GRSLRGQILIKTKGYLATSSPVV*GTLHPA
Trigger: GGCAGGGTGGAGTGTGCCCCATACAACAGGGCTGGA...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGGTCTGGCTGGAAAGGTaGGGGAAAATGAGACCAAGA +
Preference number: 2 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRVWLER*GKMRPR
Trigger: TCTTGGTCTCATTTTCCCCCACCTTTCCAGCCAGAC...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAATTGGCCTGCTCTGTCTaGCTGGAAAGGTGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQLACSV*LERWGK
Trigger: TTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAA...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAAGCCTGTATTTCCCTTTaGCCTGCTCTGTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQACISL*PALSGW
Trigger: CCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGC...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCGCCTGTATTTCCCTTTaGCCTGCTCTGTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPACISL*PALSGW
Trigger: CCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGC...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAACGTGATGTGCAGCTTTaGGGTGGGTATCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQRDVQL*GGYPLS
Trigger: GCTGAGAGGATACCCACCCCAAAGCTGCACATCACG...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCAAATCAAAAACCTTGTaGGTTTTGTCTTCCCGTTTT +
Preference number: 2 (lower is better)
Translates to: SSVARPLRGCLGYASEPGKSKTL*VLSSRF
Trigger: AAAACGGGAAGACAAAACCCACAAGGTTTTTGATTT...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp CAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGCCCACCAAAAGGAAGTGTaGGATGCTCTGTCTCCACCT +
Preference number: 2 (lower is better)
Translates to: QVKTCLNHGDKWPFGQDAHQKEV*DALSPP
Trigger: AGGTGGAGACAGAGCATCTCACACTTCCTTTTGGTG...GGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTGTTCCCCTTGAAGGTTaGGAACTGTCAACTTTGGCC +
Preference number: 2 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPVPLEG*ELSTLA
Trigger: GGCCAAAGTTGACAGTTCTCAACCTTCAAGGGGAAC...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATAGAGCCCGACGGGCTTaGGGGGACCCTCACATCGAG +
Preference number: 2 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDRARRA*GDPHIE
Trigger: CTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GTCAAACTGTCCTTTAAGCCTGTTACTGTAAGAGCCTCCACTGTGCCATATTCTCCACAGCAGGGACACTaGGTCACGATAGCAGCACTG +
Preference number: 2 (lower is better)
Translates to: VKLSFKPVTVRASTVPYSPQQGH*VTIAAL
Trigger: CAGTGCTGCTATCGTGACGCAGTGTCCCTGCTGTGG...AGAATATGGCACAGTGGAGGCTCTTACAGTAACAGGCTTAAAGGACAGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCAGGTTTGCTCCCTGGTaGGGTCGCTCACAACCAAAA +
Preference number: 2 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPRFAPW*GRSQPK
Trigger: TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCT...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp ACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACCGGCCTTATGAGTGCCAGACATCTCAGTaGCTTTATTCTCGCGATGGT +
Preference number: 2 (lower is better)
Translates to: TSQVCSHSLVPSLYRPYECQTSQ*LYSRDG
Trigger: ACCATCGCGAGAATAAAGGCACTGAGATGTCTGGCA...CTCATAAGGCCGGTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp CAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCTTTAAGAGGTTGTGAAGGAGGAGATCCATaGTTCATGCTCAGATGTGAG +
Preference number: 2 (lower is better)
Translates to: QLSSDRPSSSVARPLRGCEGGDP*FMLRCE
Trigger: CTCACATCTGAGCATGAAGCATGGATCTCCTCCTTC...ACAACCTCTTAAAGGCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACTCCCGGGAAAACCACTaGAGAGATGATGGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHSRENH*RDDGVG
Trigger: ACCCACCCCATCATCTCTGCAGTGGTTTTCCCGGGA...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATAGGCTGAGCGTGATGTaGAGCTTTGGGGTGGGTATC +
Preference number: 2 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDRLSVM*SFGVGI
Trigger: GATACCCACCCCAAAGCTGCACATCACGCTCAGCCT...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACAGGCTGAGCGTGATGTaGAGCTTTGGGGTGGGTATC +
Preference number: 2 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHRLSVM*SFGVGI
Trigger: GATACCCACCCCAAAGCTGCACATCACGCTCAGCCT...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCATCGAGCGTTTCTCTaGGCTTCCTGTCTATGTGTA +
Preference number: 2 (lower is better)
Translates to: QLSSDRPSSSVARPLRGCHRAFL*ASCLCV
Trigger: TACACATAGACAGGAAGCCCAGAGAAACGCTCGATG...ACAACCTCTTAAAGGCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GAGGCGTGCATTGAGTTACCCTGTTTCCACTTCAGCAAGTTAAGACGTGCCTCAATGAGTGGAAGGGCTTaGCAGTCTCTACTCCTCGTT +
Preference number: 2 (lower is better)
Translates to: EACIELPCFHFSKLRRASMSGRA*QSLLLV
Trigger: AACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCAT...TGAGGCACGTCTTAACTTGCTGAAGTGGAAACAGGGTAACTCAATGCACGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTAGCACGGTCCTGTGAATaGCAGAGGCTGGTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVARSCE*QRLVLG
Trigger: GCCTAGGACCAGCCTCTGCCATTCACAGGACCGTGC...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTCAGCTGAGGCTTGACTaGTTCCTTACAGCCACCAGC +
Preference number: 2 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSQLRLD*FLTATS
Trigger: GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTG...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR-3UTR CCA 90 bp TTCTTCAGAGTGACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACAGCAGCAGGACCACCTaGCATCTGTATGACTCAGAG +
Preference number: 2 (lower is better)
Translates to: FFRVTSQVCSHSLVPSLYSSRTT*HLYDSE
Trigger: CTCTGAGTCATACAGATGCCAGGTGGTCCTGCTGCT...GTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAGACGAGTTGGACCAATaGAAATTAACACCAACTATG +
Preference number: 2 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREDELDQ*KLTPTM
Trigger: CATAGTTGGTGTTAATTTCCATTGGTCCAACTCGTC...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACTTGGCCTGCTCTGTCTaGCTGGAAAGGTGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHLACSV*LERWGK
Trigger: TTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAA...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCTTGGCCTGCTCTGTCTaGCTGGAAAGGTGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPILACSV*LERWGK
Trigger: TTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAA...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp TTCAGCAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTaGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGATGG +
Preference number: 2 (lower is better)
Translates to: FSKLRRASITVISGH*GKMPDISVPLFSRW
Trigger: CCATCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp GAGTCTGTTTATGAACGCGATTCTTGGTTGGTGAGGCTGACTCATTaGAGTTGCGAGGCAGTGGACTTGAACTTCTCAGACGATTTCCCC +
Preference number: 2 (lower is better)
Translates to: ESVYERDSWLVRLTH*SCEAVDLNFSDDFP
Trigger: GGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATAAACAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR CAA 90 bp TTCAGCCCATTGGCCCAAATGCTTGGGACTGGTGGCATTCAGGTGTaGTCTCCTTTAAGAAATCCTGTAGGTCTACTCTTTCTAGGGAGC +
Preference number: 2 (lower is better)
Translates to: FSPLAQMLGTGGIQV*SPLRNPVGLLFLGS
Trigger: GCTCCCTAGAAAGAGTAGACCTACAGGATTTCTTAAAGGAGACAACACCTGAATGCCACCAGTCCCAAGCATTTGGGCCAATGGGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATGCCTGCACGGTCCTGTaGATGGCAGAGGCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDACTVL*MAEAGP
Trigger: AGGACCAGCCTCTGCCATTCACAGGACCGTGCAGGC...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGAAAGGTGGGGGAAAATaGGACCAAGAGACCAAGAAA +
Preference number: 2 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRKGGGK*DQETKK
Trigger: TTTCTTGGTCTCTTGGTCTCATTTTCCCCCACCTTT...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp CTCTTTCTAGGGAGCAAAGCCTCCTTTCTGGGAGATCTCGTTGGGGCCTTGAGACAAGGTCCATTTCCATaGAAGAGCCATGAACTTCAT +
Preference number: 2 (lower is better)
Translates to: LFLGSKASFLGDLVGALRQGPFP*KSHELH
Trigger: ATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTG...TCTCAAGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGCTCCCTAGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGAACATCGAGCGTTTCTCTaGGCTTCCTGTCTATGTGTA +
Preference number: 2 (lower is better)
Translates to: RFLVGEADSFELRGSGLEHRAFL*ASCLCV
Trigger: TACACATAGACAGGAAGCCCAGAGAAACGCTCGATG...TTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGAATGAGTGGAAGGGCTTaGCAGTCTCTACTCCTCGTT +
Preference number: 2 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRMSGRA*QSLLLV
Trigger: AACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCAT...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CTCCACCAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACCTCATAGATCTGGATTaGTTTCCAGGGATGGTGCAG +
Preference number: 2 (lower is better)
Translates to: LHQKCCHKKTVWTQFPDDLIDLD*FPGMVQ
Trigger: CTGCACCATCCCTGGAAACCAATCCAGATCTATGAG...GTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGATCCAGCCCTGTTGTATaGGGCACACTCCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: THREMLIIIPQKRPVYTRSSPVV*GTLHPA
Trigger: GGCAGGGTGGAGTGTGCCCCATACAACAGGGCTGGA...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAAGTCTGGCTGGAAAGGTaGGGGAAAATGAGACCAAGA +
Preference number: 2 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQVWLER*GKMRPR
Trigger: TCTTGGTCTCATTTTCCCCCACCTTTCCAGCCAGAC...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GTTCCTTCTGAGTATAGCCAAGGTCCATTTCCATGCAAGAGCCATGAACTTCATTTGGCCTGCTCTGTCTaGCTGGAAAGGTGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: VPSEYSQGPFPCKSHELHLACSV*LERWGK
Trigger: TTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAA...ATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTGGCTATACTCAGAAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTTGTGCAGCTTTGGGGTaGGTATCCTCTCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSCAALG*VSSQLC
Trigger: ACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACA...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTACAAGCTAAGATGGTTTaGGTCGTCTTGCCCACCCGC +
Preference number: 2 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLQAKMV*VVLPTR
Trigger: GCGGGTGGGCAAGACGACCCAAACCATCTTAGCTTG...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp TGGGATGTAGCATTAAAGTACATGCACAGCCTTTTCAGAGGAGTCTaGAATGCTCCAGTGTTTCAGCCCATTGGCCCAAATGCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: WDVALKYMHSLFRGV*NAPVFQPIGPNAWD
Trigger: GTCCCAAGCATTTGGGCCAATGGGCTGAAACACTGGAGCATTCAAGACTCCTCTGAAAAGGCTGTGCATGTACTTTAATGCTACATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTGCGTGGACAAATCTTaGTCAAAACGAAAGGTTACT +
Preference number: 2 (lower is better)
Translates to: LAGLESQLRLDWFLTATSCVDKS*SKRKVT
Trigger: AGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCA...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACTATTTCCCTTTGGCCTaGTCTGTCTGGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHYFPLA*SVWLER
Trigger: CCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATA...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATTATTTCCCTTTGGCCTaGTCTGTCTGGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDYFPLA*SVWLER
Trigger: CCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATA...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTATCTCCACCTCAAAGCTaGAGAGCAACGGGGAGACCT +
Preference number: 2 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVSPPQS*RATGRP
Trigger: AGGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGA...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATGTCTGGCTGGAAAGGTaGGGGAAAATGAGACCAAGA +
Preference number: 2 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDVWLER*GKMRPR
Trigger: TCTTGGTCTCATTTTCCCCCACCTTTCCAGCCAGAC...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACGTCTGGCTGGAAAGGTaGGGGAAAATGAGACCAAGA +
Preference number: 2 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHVWLER*GKMRPR
Trigger: TCTTGGTCTCATTTTCCCCCACCTTTCCAGCCAGAC...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTCTGTCTCCGTGGTCTTaGTCTCACATCTGTCCCGGG +
Preference number: 2 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFLSPWS*SHICPG
Trigger: CCCGGGACAGATGTGAGACCAAGACCACGGAGACAG...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATGTGCAGCTTTGGGGTaGGTATCCTCTCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLCAALG*VSSQLC
Trigger: ACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACA...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCCCAAATGCTTGGGACTaGTGGCATTCAGGTGTTGTC +
Preference number: 2 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIPNAWD*WHSGVV
Trigger: GACAACACCTGAATGCCACCAGTCCCAAGCATTTGG...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATaGGTTTCCAGGGATGGTGCAGAGGCGTGCATTGAGTTACCCTGT +
Preference number: 2 (lower is better)
Translates to: NHQCYDDQFSSHRSG*VSRDGAEACIELPC
Trigger: ACAGGGTAACTCAATGCACGCCTCTGCACCATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp CTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACATTTaGAAAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCT +
Preference number: 2 (lower is better)
Translates to: LRLDWFLTATSSRHI*KSEIWIFIRSWCHS
Trigger: AGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR-3UTR TCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGACCTGTACCGGCCTTATaGGAAATACCTGGCGTGGCA +
Preference number: 2 (lower is better)
Translates to: THREMLIIIPQKRPVYTRPVPAL*EIPGVA
Trigger: TGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGG...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTCTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFLRVGD*RLSVMC
Trigger: GCACATCACGCTCAGCCTTCAATCGCCTACCCTTAG...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GCCTGGCATGTAGCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTCTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: AWHVAAFITSITYIISVGLRVGD*RLSVMC
Trigger: GCACATCACGCTCAGCCTTCAATCGCCTACCCTTAG...ACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGCTACATGCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTCCCTGTCAATTTTCATaGGGAAAAGGAACCACAGCC +
Preference number: 2 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSPCQFS*GKGTTA
Trigger: GGCTGTGGTTCCTTTTCCTCATGAAAATTGACAGGG...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGGTGGCCATTTGGGCAAGATaGCAGACATCTCAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: AMMTSFLLIDLDWFPGMVAIWAR*QTSQCL
Trigger: AAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGC...CACCATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATAGGCTGAGCGTGATGTaGAGCTTTGGGGTGGGTATC +
Preference number: 2 (lower is better)
Translates to: NHSHILIPILTQAFQHYNRLSVM*SFGVGI
Trigger: GATACCCACCCCAAAGCTGCACATCACGCTCAGCCT...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACGACGAGTTGGACCAATaGAAATTAACACCAACTATG +
Preference number: 2 (lower is better)
Translates to: LESQLRLDWFLTATSSRHDELDQ*KLTPTM
Trigger: CATAGTTGGTGTTAATTTCCATTGGTCCAACTCGTC...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATGCCTGTATTTCCCTTTaGCCTGCTCTGTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: NHSHILIPILTQAFQHYNACISL*PALSGW
Trigger: CCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGC...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATCAGCTCTGTCTCCGTaGTCTTGGTCTCACATCTGT +
Preference number: 2 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLSALSP*SWSHIC
Trigger: ACAGATGTGAGACCAAGACCACGGAGACAGAGCTGA...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACAAATGCTTGGGACTGGTaGCATTCAGGTGTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: GRSLRGQILIKTKGYLATNAWDW*HSGVVS
Trigger: GGAGACAACACCTGAATGCCACCAGTCCCAAGCATT...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp ACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTTTTATGATGATGAATaGGTGGAAGGGCTTGGCAGT +
Preference number: 2 (lower is better)
Translates to: TVISGHLGKMPDISVPLFFYDDE*VEGLGS
Trigger: ACTGCCAAGCCCTTCCACTCATTCATCATCATAAAA...GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GAGGCGTGCATTGAGTTACCCTGTTTCCACTTCAGCAAGTTAAGACGTGCCTCATGCGTGGACAAATCTTaGTCAAAACGAAAGGTTACT +
Preference number: 2 (lower is better)
Translates to: EACIELPCFHFSKLRRASCVDKS*SKRKVT
Trigger: AGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCA...TGAGGCACGTCTTAACTTGCTGAAGTGGAAACAGGGTAACTCAATGCACGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GCCTGGCATGTAGCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTTTTACACGAGAAGCCTaGGGTTCAGCGAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: AWHVAAFITSITYIISVGFTREA*GSARVS
Trigger: GCTTACCCTCGCTGAACCTCAGGCTTCTCGTGTAAA...ACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGCTACATGCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCGCCAAAAGCAGGCTATaGTGTGTGATGGGAAAGAAA +
Preference number: 2 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIAKSRL*CVMGKK
Trigger: TTTCTTTCCCATCACACATCATAGCCTGCTTTTGGC...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAGAAGGAGGAGATCCATaGTTCATGCTCAGATGTGAG +
Preference number: 2 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLEGGDP*FMLRCE
Trigger: CTCACATCTGAGCATGAAGCATGGATCTCCTCCTTC...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTACTGTCTATGTGTAGCTaGACCATCCCCACAGTTGTG +
Preference number: 2 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVLSMCS*TIPTVV
Trigger: CACAACTGTGGGGATGGTCCAGCTACACATAGACAG...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGAAGCAGCAGGACCACCTaGCATCTGTATGACTCAGAG +
Preference number: 2 (lower is better)
Translates to: THREMLIIIPQKRPVYTRSSRTT*HLYDSE
Trigger: CTCTGAGTCATACAGATGCCAGGTGGTCCTGCTGCT...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATTGTGCAGCTTTGGGGTaGGTATCCTCTCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: NHSHILIPILTQAFQHYNCAALG*VSSQLC
Trigger: ACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACA...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAGCCAAAAGCAGGCTATaGTGTGTGATGGGAAAGAAA +
Preference number: 2 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLAKSRL*CVMGKK
Trigger: TTTCTTTCCCATCACACATCATAGCCTGCTTTTGGC...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTACCCTGTCAATTTTCATaGGGAAAAGGAACCACAGCC +
Preference number: 2 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVPCQFS*GKGTTA
Trigger: GGCTGTGGTTCCTTTTCCTCATGAAAATTGACAGGG...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GCCTGGCATGTAGCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTGCCATTTGGGCAAGATaGCAGACATCTCAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: AWHVAAFITSITYIISVGAIWAR*QTSQCL
Trigger: AAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGC...ACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGCTACATGCCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATTATTTCCCTTTGGCCTaGTCTGTCTGGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: NHSHILIPILTQAFQHYNYFPLA*SVWLER
Trigger: CCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATA...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTAGAAGGAGGAGATCCATaGTTCATGCTCAGATGTGAG +
Preference number: 2 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVEGGDP*FMLRCE
Trigger: CTCACATCTGAGCATGAAGCATGGATCTCCTCCTTC...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGAATGCAGGGTAGGTGCTaGACAAAATCATCAATAAGA +
Preference number: 2 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRMQGRC*TKSSIR
Trigger: TCTTATTGATGATTTTGTGCAGCACCTACCCTGCAT...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GCCTGGCATGTAGCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTACTGGCAAGCTAAGATaGTTTGGGTCGTCTTGCCCA +
Preference number: 2 (lower is better)
Translates to: AWHVAAFITSITYIISVGTGKLR*FGSSCP
Trigger: TGGGCAAGACGACCCAAACCATCTTAGCTTGCCAGT...ACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGCTACATGCCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp TGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGCAGCAGAGGTCCACTTaGGAAGGCAGAAATCCCGAA +
Preference number: 2 (lower is better)
Translates to: CIYYKHHIHYLSRCFDSQQQRST*EGRNPE
Trigger: TTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTG...CTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGAGTGACATCACAAGTATaGTCCCATAGTCTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: THREMLIIIPQKRPVYTRVTSQV*SHSLVP
Trigger: TGGCACCAGACTATGGGAGCATACTTGTGATGTCAC...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTATATGAACGCGATTCTTaGTTGGTGAGGCTGACTCAT +
Preference number: 2 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVYERDS*LVRLTH
Trigger: ATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATA...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATGACGAGTTGGACCAATaGAAATTAACACCAACTATG +
Preference number: 2 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDDELDQ*KLTPTM
Trigger: CATAGTTGGTGTTAATTTCCATTGGTCCAACTCGTC...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATTCAGCTCTGTCTCCGTaGTCTTGGTCTCACATCTGT +
Preference number: 2 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDSALSP*SWSHIC
Trigger: ACAGATGTGAGACCAAGACCACGGAGACAGAGCTGA...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTAAAGGTGGGGGAAAATaGGACCAAGAGACCAAGAAA +
Preference number: 2 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFKGGGK*DQETKK
Trigger: TTTCTTGGTCTCTTGGTCTCATTTTCCCCCACCTTT...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp GTTCCTTCTGAGTATAGCCAAGGTCCATTTCCATGCAAGAGCCATGAACTTCATTTGAAAAGCGAGATCTaGATTTTTATCCGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: VPSEYSQGPFPCKSHELHLKSEI*IFIRSW
Trigger: CCAGCTTCGGATAAAAATCCAGATCTCGCTTTTCAA...ATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTGGCTATACTCAGAAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGGGGAAATTTCAACATaGGATGTAGCATTAAAGTAC +
Preference number: 2 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSGEIST*DVALKY
Trigger: GTACTTTAATGCTACATCCCATGTTGAAATTTCCCC...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCTATAATTCTTATTTATaGAGGGTAGGTGCTGCACAA +
Preference number: 2 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIYNSYL*RVGAAQ
Trigger: TTGTGCAGCACCTACCCTGCATAAATAAGAATTATA...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGAGAGAACTGTCAACTTTaGCCTAGAGAATCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: THREMLIIIPQKRPVYTRENCQL*PRESEV
Trigger: AACCTCAGATTCTCTAGGCCAAAGTTGACAGTTCTC...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR TCA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATCCTCTAAACTCTTCCTaGGACCAATGTGAACTTTAC +
Preference number: 2 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDPLNSS*DQCELY
Trigger: GTAAAGTTCACATTGGTCTCAGGAAGAGTTTAGAGG...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR GCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATATGCAGGGTAGGTGCTaGACAAAATCATCAATAAGA +
Preference number: 2 (lower is better)
Translates to: NHSHILIPILTQAFQHYNMQGRC*TKSSIR
Trigger: TCTTATTGATGATTTTGTGCAGCACCTACCCTGCAT...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGACGAGTTGGACCAATaGAAATTAACACCAACTATG +
Preference number: 2 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFDELDQ*KLTPTM
Trigger: CATAGTTGGTGTTAATTTCCATTGGTCCAACTCGTC...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAAAATCAAAAACCTTGTaGGTTTTGTCTTCCCGTTTT +
Preference number: 2 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLKSKTL*VLSSRF
Trigger: AAAACGGGAAGACAAAACCCACAAGGTTTTTGATTT...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR CAA 90 bp GCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTGCTTaGACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCT +
Preference number: 2 (lower is better)
Translates to: AAFITSITYIISVGA*THREMLIIIPQKRP
Trigger: AGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CCA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATGGGAGGATGGATGAATaGGTGATTTTTAGAAAATGG +
Preference number: 2 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDGRMDE*VIFRKW
Trigger: CCATTTTCTAAAAATCACCCATTCATCCATCCTCCC...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp TCCCCGTCCTCTGTTGGGGCCGCCTGCACGGTCCTGTaGATGGCAGAGGCTGGTCCTAGGCGTGCGAGATGC +
Preference number: 3 (lower is better)
Translates to: SPSSVGAACTVL*MAEAGPRRARC
Trigger: GCATCTCGCACGCCTAGGACCAGCCTCTGCCATTCACAGGACCGTGCAGGCGGCCCCAACAGAGGACGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp CGTCCTCTGTTGGGGCCGCCTGCACGGTCCTGTGAATaGCAGAGGCTGGTCCTAGGCGTGCGAGATGCCAGG +
Preference number: 3 (lower is better)
Translates to: RPLLGPPARSCE*QRLVLGVRDAR
Trigger: CCTGGCATCTCGCACGCCTAGGACCAGCCTCTGCCATTCACAGGACCGTGCAGGCGGCCCCAACAGAGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GCAGAGGCTGGTCCTAGGCGTGCGAGATGCCAGGGCCTGAGCAGTATCCACACCGGGGCCATAGAAGGTTaGCTCCCTGGTGCGGTCGCT +
Preference number: 3 (lower is better)
Translates to: AEAGPRRARCQGLSSIHTGAIEG*LPGAVA
Trigger: AGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCC...GGTGTGGATACTGCTCAGGCCCTGGCATCTCGCACGCCTAGGACCAGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CCGGGCCCTGCAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGGTGAGGCTGACTCATTaGAGTTGCGAGGCAGTGGAC +
Preference number: 3 (lower is better)
Translates to: PGPAGGPGERVADGETPRVRLTH*SCEAVD
Trigger: GTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCAC...CCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCAGGGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR GCA 72 bp ATGGTCCTTCCGTCTGGGGCACTGCCCAGTGCTTGCTaGTCCTGTGGCCGGGGCCATAGAAGGTTTGCTCCC +
Preference number: 3 (lower is better)
Translates to: MVLPSGALPSAC*SCGRGHRRFAP
Trigger: GGGAGCAAACCTTCTATGGCCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGCCCCAGACGGAAGGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp GGGCCTGAGCAGTATCCACACCCCCACGCCGCTCTCTaGAGGCGAGAAGAGCGTGTGCTTGCCTCTCTCAAG +
Preference number: 3 (lower is better)
Translates to: GPEQYPHPHAAL*RREERVLASLK
Trigger: CTTGAGAGAGGCAAGCACACGCTCTTCTCGCCTCCAGAGAGCGGCGTGGGGGTGTGGATACTGCTCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGAGCGAGCCAGGCACCTaGAGCTCCATCCAAACCGTT +
Preference number: 3 (lower is better)
Translates to: AERARRACGDPHIERFSGSEPGT*SSIQTV
Trigger: AACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCT...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGTCTGTCTCCGTGGTCTaGGTCTCACATCTGTCCCGG +
Preference number: 3 (lower is better)
Translates to: AERARRACGDPHIERFSGSVSVV*VSHLSR
Trigger: CCGGGACAGATGTGAGACCAAGACCACGGAGACAGA...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCC +
Preference number: 3 (lower is better)
Translates to: QEGQVRELQTGKPHGTQAPRTPL*NVQLVP
Trigger: GGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGG...AGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCTGTCCCCGTCCTCTGTaGGGGCCGCCTGCACGGTCC +
Preference number: 3 (lower is better)
Translates to: GSQVDLAGLESQLRLDWFCPRPL*GPPARS
Trigger: GGACCGTGCAGGCGGCCCCAACAGAGGACGGGGACA...GAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGGGCTCTCAGGTGGACTaGGCAGGATTAGAGTCACAG +
Preference number: 3 (lower is better)
Translates to: AERARRACGDPHIERFSGGSQVD*AGLESQ
Trigger: CTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGGTGAGGCTGACTCATTaGAGTTGCGAGGCAGTGGAC +
Preference number: 3 (lower is better)
Translates to: AERARRACGDPHIERFSGVRLTH*SCEAVD
Trigger: GTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCAC...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp GCAGGACCACCTGGCATCTGTATGACTCAGAGGCACTaGGCCTGGAAACAGACCCAGTCCCCGCCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: AGPPGICMTQRH*AWKQTQSPPQG
Trigger: TCCCTGGGGCGGGGACTGGGTCTGTTTCCAGGCTCAGTGCCTCTGAGTCATACAGATGCCAGGTGGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGTGTCCCCGTCCTCTGTaGGGGCCGCCTGCACGGTCC +
Preference number: 3 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKCPRPL*GPPARS
Trigger: GGACCGTGCAGGCGGCCCCAACAGAGGACGGGGACA...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR GCA 72 bp CTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATaGCAGCGAGCCAGGCACCTTGAGCTCCATCCAAAC +
Preference number: 3 (lower is better)
Translates to: LCGPAFKRLSGL*QRARHLELHPN
Trigger: GTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR CCA 72 bp ACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTaGGCTTCCTGTCTATGTGTAGCTGGACCATCCCCA +
Preference number: 3 (lower is better)
Translates to: TGLRGPSHRAFL*ASCLCVAGPSP
Trigger: TGGGGATGGTCCAGCTACACATAGACAGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp TGCTCCTGTGGCCGGGGCCATAGAAGGTTTGCTCCCTaGTGCGGTCGCTCACAACCAAAACAAGGACTAGGG +
Preference number: 3 (lower is better)
Translates to: CSCGRGHRRFAP*CGRSQPKQGLG
Trigger: CCCTAGTCCTTGTTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCCGGCCACAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACAGCAGAGGTCCACTaGAGAAGGCAGAAATCCCGA +
Preference number: 3 (lower is better)
Translates to: SSVARPLRGCLGYASEPGTAEVH*RRQKSR
Trigger: TCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AAAGGTTACTTAGCCACAGCAGGGACACTGCGTCACGATAGCAGCACTGAGAAGAAGAGCCCGACGGGCTaGCGGGGACCCTCACATCGA +
Preference number: 3 (lower is better)
Translates to: KGYLATAGTLRHDSSTEKKSPTG*RGPSHR
Trigger: TCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTT...CTTCTCAGTGCTGCTATCGTGACGCAGTGTCCCTGCTGTGGCTAAGTAACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAGGCCTGTATTTCCCTTaGGCCTGCTCTGTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSGLYFP*ACSVWL
Trigger: CAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCC...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCTCTGTCTCCGTGGTCTaGGTCTCACATCTGTCCCGG +
Preference number: 3 (lower is better)
Translates to: GSVRCSVSTSKLESNGETSVSVV*VSHLSR
Trigger: CCGGGACAGATGTGAGACCAAGACCACGGAGACAGA...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCAGTTGCATGGTAAATaGTTGGAACTGGAGGTGACA +
Preference number: 3 (lower is better)
Translates to: QEGQVRELQTGKPHGTQAQLHGK*LELEVT
Trigger: TGTCACCTCCAGTTCCAACAATTTACCATGCAACTG...AGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp CCATCCCTGTACCGGCCTTATGAGAAATACCTGGCGTaGCAGCTTCCAGCCCTGTTGTATGGGGCACACTCC +
Preference number: 3 (lower is better)
Translates to: PSLYRPYEKYLA*QLPALLYGAHS
Trigger: GGAGTGTGCCCCATACAACAGGGCTGGAAGCTGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp TGGTGCCATCCCTGTACCGGCCTTATGAGAAATACCTaGCGTGGCAGCTTCCAGCCCTGTTGTATGGGGCAC +
Preference number: 3 (lower is better)
Translates to: WCHPCTGLMRNT*RGSFQPCCMGH
Trigger: GTGCCCCATACAACAGGGCTGGAAGCTGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGGGATGGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp GGTAGGCGATTGAAGGCTGAGCGTGATGTGCAGCTTTaGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTC +
Preference number: 3 (lower is better)
Translates to: GRRLKAERDVQL*GGYPLSSVSVV
Trigger: GACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACATCACGCTCAGCCTTCAATCGCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCC +
Preference number: 3 (lower is better)
Translates to: PLEKAEIPKPCSALAVRPPRTPL*NVQLVP
Trigger: GGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGG...GGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCC +
Preference number: 3 (lower is better)
Translates to: AEVHLRRQKSRSRVRLWQPRTPL*NVQLVP
Trigger: GGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGG...CTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGAAGCCGTGTTCGGCTTaGGCAGTGAGACCCAGCATC +
Preference number: 3 (lower is better)
Translates to: LRRFPQLSSDRPSSSVARKPCSA*AVRPSI
Trigger: GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTT...CCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATACAGCAGAGGTCCACTaGAGAAGGCAGAAATCCCGA +
Preference number: 3 (lower is better)
Translates to: ADGETPRHAGSESVYERDTAEVH*RRQKSR
Trigger: TCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT...ATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATGCCAGGCAGGTGCCGTaGAATCACCAGTGCTATGAT +
Preference number: 3 (lower is better)
Translates to: AFKRLSGLCQRARHLELHARQVP*NHQCYD
Trigger: ATCATAGCACTGGTGATTCAACGGCACCTGCCTGGC...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTCCGGCCTTTAAGAGGTaGTCTGGGCTATGCCAGCGA +
Preference number: 3 (lower is better)
Translates to: GKPHGTQALSLFMNAILGPAFKR*SGLCQR
Trigger: TCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGG...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR TCA 72 bp AGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTaGGACCCAGCATCCACGGACGCCTCTCTTGAATGT +
Preference number: 3 (lower is better)
Translates to: RQKSRSRVRLWQ*DPASTDASLEC
Trigger: ACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTGGCTCTCAGGTGGACTaGGCAGGATTAGAGTCACAG +
Preference number: 3 (lower is better)
Translates to: GKPHGTQALSLFMNAILGGSQVD*AGLESQ
Trigger: CTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR TCA 72 bp GGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGCAGCTTTGGGGTGGGT +
Preference number: 3 (lower is better)
Translates to: GVRSETPLRVGD*RLSVMCSFGVG
Trigger: ACCCACCCCAAAGCTGCACATCACGCTCAGCCTTCAATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp AAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGATaGTCCTTCCGTCTGGGGCACTGCCCAGTGCTTGCT +
Preference number: 3 (lower is better)
Translates to: KMPDISVPLFSR*SFRLGHCPVLA
Trigger: AGCAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp AGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTaGTCTTGGTCTCACATCTGTCCCGGGAAAACCACT +
Preference number: 3 (lower is better)
Translates to: SFGVGILSALSP*SWSHICPGKTT
Trigger: AGTGGTTTTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CTCTTTCTAGGGAGCAAAGCCTCCTTTCTGGGAGATCTCGTTGGGGCCTTGAGAGCCAGGCAGGTGCCGTaGAATCACCAGTGCTATGAT +
Preference number: 3 (lower is better)
Translates to: LFLGSKASFLGDLVGALRARQVP*NHQCYD
Trigger: ATCATAGCACTGGTGATTCAACGGCACCTGCCTGGC...TCTCAAGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGCTCCCTAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCTGCGAGGCAGTGGACTaGAACTTCTCAGACGATTTC +
Preference number: 3 (lower is better)
Translates to: GSVRCSVSTSKLESNGETCEAVD*NFSDDF
Trigger: GAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGCA...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCAAAACCTTGTGGGTTTaGTCTTCCCGTTTTGTTTGG +
Preference number: 3 (lower is better)
Translates to: SSVARPLRGCLGYASEPGKTLWV*SSRFVW
Trigger: CCAAACAAAACGGGAAGACAAAACCCACAAGGTTTT...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp TATGGGGCACACTCCACCCTGCCAGGCAGGTGCCGTTaGATCACCAGTGCTATGATGACCAGTTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: YGAHSTLPGRCR*ITSAMMTSFLL
Trigger: GAGAAGAAAACTGGTCATCATAGCACTGGTGATTCAACGGCACCTGCCTGGCAGGGTGGAGTGTGCCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp GAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTaGGCTCCATCCAAACCGTTCTCTCTTTGGATGAAT +
Preference number: 3 (lower is better)
Translates to: EVVWAMPASQAP*APSKPFSLWMN
Trigger: ATTCATCCAAAGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR TCA 72 bp GCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTaGGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGC +
Preference number: 3 (lower is better)
Translates to: AVDLNFSDDFPN*VVTDLLALWPG
Trigger: GCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR CCA 72 bp GTGAGTTTCAGAGGAGGATGGGCCTGTATTTCCCTTTaGCCTGCTCTGTCTGGCTGGAAAGGTGGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: VSFRGGWACISL*PALSGWKGGGK
Trigger: TTTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCCCATCCTCCTCTGAAACTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp CACCACCTCCCCCAAGAGGATAGCAGGTCTTCCCTTTaGGGTCATCCCCTATTGAGAGTAGGGAGGAATTTC +
Preference number: 3 (lower is better)
Translates to: HHLPQEDSRSSL*GHPLLRVGRNF
Trigger: GAAATTCCTCCCTACTCTCAATAGGGGATGACCCCAAAGGGAAGACCTGCTATCCTCTTGGGGGAGGTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp TCAAAGCTGGAGAGCAACGGGGAGACCTTCCAGGTAGTGGGAACGGCACGGGCACTGCGTGGACAAATCTaGATCAAAACGAAAGGTTAC +
Preference number: 3 (lower is better)
Translates to: SKLESNGETFQVVGTARALRGQI*IKTKGY
Trigger: GTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAG...TGCCCGTGCCGTTCCCACTACCTGGAAGGTCTCCCCGTTGCTCTCCAGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCCAGCTTCCAGCCCTGTaGTATGGGGCACACTCCACC +
Preference number: 3 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPQLPAL*YGAHST
Trigger: GGTGGAGTGTGCCCCATACAACAGGGCTGGAAGCTG...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp GGGAGCAAAAGGGTCAGGAGACACCAAAAGGAAGTGTaGGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCA +
Preference number: 3 (lower is better)
Translates to: GSKRVRRHQKEV*DALSPPQSWRA
Trigger: TGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCCTTTTGGTGTCTCCTGACCCTTTTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp GCAAAGCCTCCTTTCTGGGAGATCTCGTTGGGGCCTTaGGACAGGCCAGTAAACCGTGTTCCTTCTGAGTAT +
Preference number: 3 (lower is better)
Translates to: AKPPFWEISLGP*DRPVNRVPSEY
Trigger: ATACTCAGAAGGAACACGGTTTACTGGCCTGTCTCAAGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR GCA 72 bp CAAAAGGGTCAGGAGACACCAAAAGGAAGTGTGAGATaGTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGG +
Preference number: 3 (lower is better)
Translates to: QKGQETPKGSVR*SVSTSKLESNG
Trigger: CCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCCTTTTGGTGTCTCCTGACCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp CATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATaGGCCTGTATTTCCCTTTGGCCTGCTCTGTCTGGC +
Preference number: 3 (lower is better)
Translates to: HASCSDVSFRGG*ACISLWPALSG
Trigger: GCCAGACAGAGCAGGCCAAAGGGAAATACAGGCCCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGGACCATCCCCACAGTaGTGTAGGGGAATGAGTAGA +
Preference number: 3 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTGPSPQ*CRGMSR
Trigger: TCTACTCATTCCCCTACACAACTGTGGGGATGGTCC...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTAATGAGTGGAAGGGCTaGGCAGTCTCTACTCCTCGT +
Preference number: 3 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPNEWKG*AVSTPR
Trigger: ACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCATT...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATGGCCTGTATTTCCCTTaGGCCTGCTCTGTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDGLYFP*ACSVWL
Trigger: CAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCC...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACGGCCTGTATTTCCCTTaGGCCTGCTCTGTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHGLYFP*ACSVWL
Trigger: CAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCC...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCGGCCTGTATTTCCCTTaGGCCTGCTCTGTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIGLYFP*ACSVWL
Trigger: CAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCC...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp CAGCAAGTTAAGACGTGCCTCAATCACGGTGATAAGTaGCCATTTGGGCAAGATGCCAGACATCTCAGTGCC +
Preference number: 3 (lower is better)
Translates to: QQVKTCLNHGDK*PFGQDARHLSA
Trigger: GGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp CACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTaGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCA +
Preference number: 3 (lower is better)
Translates to: HAGSESVYERDS*LVRLTHLSCEA
Trigger: TGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR-3UTR CAA 90 bp ACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCAATGAGTGGAAGGGCTaGGCAGTCTCTACTCCTCGT +
Preference number: 3 (lower is better)
Translates to: TVISGHLGKMPDISVPLFNEWKG*AVSTPR
Trigger: ACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCATT...GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp TACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATGTTGGGGCCATAGAAGGTTaGCTCCCTGGTGCGGTCGCT +
Preference number: 3 (lower is better)
Translates to: YKHHIHYLSRCFDSQGDVGAIEG*LPGAVA
Trigger: AGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCC...AACATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACATCTCATAGATCTGGATaGGTTTCCAGGGATGGTGCA +
Preference number: 3 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTSHRSG*VSRDGA
Trigger: TGCACCATCCCTGGAAACCAATCCAGATCTATGAGA...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGATCAGCTCTAGACACATTTaGAAAAGCGAGATCTGGATT +
Preference number: 3 (lower is better)
Translates to: ERHGQRRRGRSLRGQILISSRHI*KSEIWI
Trigger: AATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGCT...GATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATCTGTCTCCGTGGTCTaGGTCTCACATCTGTCCCGG +
Preference number: 3 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLSVSVV*VSHLSR
Trigger: CCGGGACAGATGTGAGACCAAGACCACGGAGACAGA...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCTTGCATGGTAAATTGTaGGAACTGGAGGTGACAAAA +
Preference number: 3 (lower is better)
Translates to: GSVRCSVSTSKLESNGETLHGKL*ELEVTK
Trigger: TTTTGTCACCTCCAGTTCCAACAATTTACCATGCAA...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCGGTGGCATTCAGGTGTaGTCTCCTTTAAGAAATCCT +
Preference number: 3 (lower is better)
Translates to: LAGLESQLRLDWFLTATSGGIQV*SPLRNP
Trigger: AGGATTTCTTAAAGGAGACAACACCTGAATGCCACC...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp TGGATTGGTTTCCAGGGATGGTGCAGAGGCGTGCATTaGGTTACCCTGTTTCCACTTCAGCAAGTTAAGACG +
Preference number: 3 (lower is better)
Translates to: WIGFQGWCRGVH*VTLFPLQQVKT
Trigger: CGTCTTAACTTGCTGAAGTGGAAACAGGGTAACTCAATGCACGCCTCTGCACCATCCCTGGAAACCAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp ATGACATTCCCATCACGGGGCCCAACTTCTTCAGAGTaGCATCACAAGTATGCTCCCATAGTCTGGTGCCAT +
Preference number: 3 (lower is better)
Translates to: MTFPSRGPTSSE*HHKYAPIVWCH
Trigger: ATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAAGTTGGGCCCCGTGATGGGAATGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp AATGCTCCAGTGTTTCAGCCCATTGGCCCAAATGCTTaGGACTGGTGGCATTCAGGTGTTGTCTCCTTTAAG +
Preference number: 3 (lower is better)
Translates to: NAPVFQPIGPNA*DWWHSGVVSFK
Trigger: CTTAAAGGAGACAACACCTGAATGCCACCAGTCCCAAGCATTTGGGCCAATGGGCTGAAACACTGGAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCC +
Preference number: 3 (lower is better)
Translates to: RSGFLSEAGAILIQPLPLPRTPL*NVQLVP
Trigger: GGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGG...CAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCGTGCAGAGGCGTGCATaGAGTTACCCTGTTTCCACT +
Preference number: 3 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIVQRRA*SYPVST
Trigger: AGTGGAAACAGGGTAACTCAATGCACGCCTCTGCAC...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACACATTGGCCCAAATGCTaGGGACTGGTGGCATTCAGG +
Preference number: 3 (lower is better)
Translates to: GRSLRGQILIKTKGYLATHWPKC*GLVAFR
Trigger: CCTGAATGCCACCAGTCCCAAGCATTTGGGCCAATG...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp GAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTaGGTTTCAGAGGAGGATGGGCCTGTATTTCCCTTT +
Preference number: 3 (lower is better)
Translates to: EGRRRSMLHAQM*VSEEDGPVFPF
Trigger: AAAGGGAAATACAGGCCCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR GCA 72 bp AGATCTGGATTGGTTTCCAGGGATGGTGCAGAGGCGTaGATTGAGTTACCCTGTTTCCACTTCAGCAAGTTA +
Preference number: 3 (lower is better)
Translates to: RSGLVSRDGAEA*IELPCFHFSKL
Trigger: TAACTTGCTGAAGTGGAAACAGGGTAACTCAATGCACGCCTCTGCACCATCCCTGGAAACCAATCCAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACAGTGCAGAGGCGTGCATaGAGTTACCCTGTTTCCACT +
Preference number: 3 (lower is better)
Translates to: GRSLRGQILIKTKGYLATVQRRA*SYPVST
Trigger: AGTGGAAACAGGGTAACTCAATGCACGCCTCTGCAC...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCGGCCTGTATTTCCCTTaGGCCTGCTCTGTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: NHQCYDDQFSSHRSGLVSGLYFP*ACSVWL
Trigger: CAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCC...GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTTCTGTCTCCGTGGTCTaGGTCTCACATCTGTCCCGG +
Preference number: 3 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFSVSVV*VSHLSR
Trigger: CCGGGACAGATGTGAGACCAAGACCACGGAGACAGA...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAACTAAGGGTAGGCGATaGAAGGCTGAGCGTGATGTG +
Preference number: 3 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLTKGRR*KAERDV
Trigger: CACATCACGCTCAGCCTTCAATCGCCTACCCTTAGT...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp ATTAAAGTCCCCTCAGTGAATCTGGAGGTCAAACTGTCCTTTAAGCCTGTTACTGGACCATCCCCACAGTaGTGTAGGGGAATGAGTAGA +
Preference number: 3 (lower is better)
Translates to: IKVPSVNLEVKLSFKPVTGPSPQ*CRGMSR
Trigger: TCTACTCATTCCCCTACACAACTGTGGGGATGGTCC...AGTAACAGGCTTAAAGGACAGTTTGACCTCCAGATTCACTGAGGGGACTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR GCA 72 bp GAATACCTAATACTTCCCGTTTTGTCACGACACACGTaGACACAGAAGCACACACACAACACACACACAGTC +
Preference number: 3 (lower is better)
Translates to: EYLILPVLSRHT*TQKHTHNTHTV
Trigger: GACTGTGTGTGTGTTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR CCA 72 bp AGGCCCTGTGTCCTGGACGAAGGGGAAATTTCAACATaGGATGTAGCATTAAAGTACATGCACAGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: RPCVLDEGEIST*DVALKYMHSLF
Trigger: GAAAAGGCTGTGCATGTACTTTAATGCTACATCCCATGTTGAAATTTCCCCTTCGTCCAGGACACAGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTACTAAGGGTAGGCGATaGAAGGCTGAGCGTGATGTG +
Preference number: 3 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFTKGRR*KAERDV
Trigger: CACATCACGCTCAGCCTTCAATCGCCTACCCTTAGT...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp TGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGAACGCGATTCTTGGTaGGTGAGGCTGACTCATTTG +
Preference number: 3 (lower is better)
Translates to: CIYYKHHIHYLSRCFDSQERDSW*VRLTHL
Trigger: CAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTC...CTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAGATAAATCAAAAACCTaGTGGGTTTTGTCTTCCCGT +
Preference number: 3 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLDKSKT*WVLSSR
Trigger: ACGGGAAGACAAAACCCACAAGGTTTTTGATTTATC...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATCAGTTGCATGGTAAATaGTTGGAACTGGAGGTGACA +
Preference number: 3 (lower is better)
Translates to: NHSHILIPILTQAFQHYNQLHGK*LELEVT
Trigger: TGTCACCTCCAGTTCCAACAATTTACCATGCAACTG...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR TCA 72 bp AGGCCAAGACATAGCTCCTTGCCTCTAAACTCTTCCTaGGACCAATGTGAACTTTACCCTATTTACAAATCA +
Preference number: 3 (lower is better)
Translates to: RPRHSSLPLNSS*DQCELYPIYKS
Trigger: TGATTTGTAAATAGGGTAAAGTTCACATTGGTCTCAGGAAGAGTTTAGAGGCAAGGAGCTATGTCTTGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR-3UTR CAA 90 bp GCCTGGCATGTAGCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTAAAACCTTGTGGGTTTaGTCTTCCCGTTTTGTTTGG +
Preference number: 3 (lower is better)
Translates to: AWHVAAFITSITYIISVGKTLWV*SSRFVW
Trigger: CCAAACAAAACGGGAAGACAAAACCCACAAGGTTTT...ACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGCTACATGCCAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCCGTCCGCCTTGTACCTaGGCCGGCTGGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: PEAVFGFGSETQHPRTPLRPPCT*AGWAAA
Trigger: AGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGACG...GAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGCACTGCCCAGTGCTTaGTGCTCCTGTGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPALPSA*CSCGRG
Trigger: GCCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGC...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGGTTCGGCTTTGGCAGTaGGACCCAGCATCCACGGAC +
Preference number: 4 (lower is better)
Translates to: AERARRACGDPHIERFSGVRLWQ*DPASTD
Trigger: GTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAAC...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAGCCCAGCAAGGAGCCTaGAGGTCCGCGCGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREAQQGA*RSARPA
Trigger: CGCTGGGCGCGCGGACCTGCAGGCTCCTTGCTGGGC...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CCA 90 bp AGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGTGTACCTGGGCCGGCTaGGCCGCGGCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RNPEAVFGFGSETQHPRTCTWAG*AAAPQG
Trigger: TCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACA...CGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCGTCCGCCTTGTACCTaGGCCGGCTGGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: AFKRLSGLCQRARHLELHRPPCT*AGWAAA
Trigger: AGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGACG...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGGCACGGTCCTGTGAATaGCAGAGGCTGGTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: AERARRACGDPHIERFSGARSCE*QRLVLG
Trigger: GCCTAGGACCAGCCTCTGCCATTCACAGGACCGTGC...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CCGGGCCCTGCAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGCAGCAGAGGTCCACTTaGGAAGGCAGAAATCCCGAA +
Preference number: 4 (lower is better)
Translates to: PGPAGGPGERVADGETPRQQRST*EGRNPE
Trigger: TTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTG...CCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCAGGGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGATGGACGCCGGCGCGGTaGGGTTCCGACTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: AEIPKPCSALAVRPSIHGWTPAR*GSDCRI
Trigger: GATCCTGCAGTCGGAACCGCACCGCGCCGGCGTCCA...TCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR GCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTACATGCAGAAGGCCTTaGCCGCATCGGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPTCRRP*PHRCQV
Trigger: CACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGT...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCAGGCGGCCGCCCCGATaGACAGCGTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: EKAEIPKPCSALAVRPSIRRPPR*TASPCR
Trigger: CCTGCATGGGGACGCTGTGCATCGGGGCGGCCGCCT...GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGGCGGCCGCCCCGATaGACAGCGTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: PLEKAEIPKPCSALAVRPRRPPR*TASPCR
Trigger: CCTGCATGGGGACGCTGTGCATCGGGGCGGCCGCCT...GGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TGGGAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGGCACTGCCCAGTGCTTaGTGCTCCTGTGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WERHGQRRRGRSLRGQILALPSA*CSCGRG
Trigger: GCCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGC...CAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAACCGGGCGTCGGCCGGTaGGCGAAGTTTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREPGVGR*AKFARL
Trigger: GAGCCGAGCAAACTTCGCGCACCGGCCGACGCCCGG...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CCA 90 bp GCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGCTCCACTCCTCACACTaGGAGAAGGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: AQHSRGPLEKAEIPKPCSLHSSH*EKAAAP
Trigger: CGGGGCGGCCGCCTTCTCCCAGTGTGAGGAGTGGAG...CGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGTCTATGTCTCCACTCCTCACACTaGGAGAAGGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: TGLRGPSHRAFLWASCLCLHSSH*EKAAAP
Trigger: CGGGGCGGCCGCCTTCTCCCAGTGTGAGGAGTGGAG...ACATAGACAGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATTGTACCTGGGCCGGCTaGGCCGCGGCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AFKRLSGLCQRARHLELHCTWAG*AAAPQG
Trigger: TCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACA...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp ACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCGTCCGCCTTGTACCTaGGCCGGCTGGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: TAEVHLRRQKSRSRVRLWRPPCT*AGWAAA
Trigger: AGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGACG...CCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGCGTCCGCCTTGTACCTaGGCCGGCTGGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: HSRGPLEKAEIPKPCSALRPPCT*AGWAAA
Trigger: AGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGACG...CAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTGTCCCCGTCCTCTGTTaGGGCCGCCTGCACGGTCCT +
Preference number: 4 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSVPVLC*GRLHGP
Trigger: AGGACCGTGCAGGCGGCCCCAACAGAGGACGGGGAC...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GCAGAGGCTGGTCCTAGGCGTGCGAGATGCCAGGGCCTGAGCAGTATCCACACCTCCAGCCCTGTTGTATaGGGCACACTCCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: AEAGPRRARCQGLSSIHTSSPVV*GTLHPA
Trigger: GGCAGGGTGGAGTGTGCCCCATACAACAGGGCTGGA...GGTGTGGATACTGCTCAGGCCCTGGCATCTCGCACGCCTAGGACCAGCCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTATGACTCAGAGGCACTaGGCCTGGAAACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: QEGQVRELQTGKPHGTQAMTQRH*AWKQTQ
Trigger: CTGGGTCTGTTTCCAGGCTCAGTGCCTCTGAGTCAT...AGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAATGGACGCCGGCGCGGTaGGGTTCCGACTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREWTPAR*GSDCRI
Trigger: GATCCTGCAGTCGGAACCGCACCGCGCCGGCGTCCA...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR GCA 90 bp GGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTTTGGACGCCGGCGCGGTaGGGTTCCGACTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: GLCQRARHLELHPNRSLFWTPAR*GSDCRI
Trigger: GATCCTGCAGTCGGAACCGCACCGCGCCGGCGTCCA...AAAGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCCGCATCGGTGCCAGGTaGAGCGTGCCCATAACCTAT +
Preference number: 4 (lower is better)
Translates to: PEAVFGFGSETQHPRTPLRIGAR*SVPITY
Trigger: ATAGGTTATGGGCACGCTGCACCTGGCACCGATGCG...GAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR GCA 90 bp ATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCACATGCAGAAGGCCTTaGCCGCATCGGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: IPKPCSALAVRPSIHGRLTCRRP*PHRCQV
Trigger: CACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGT...GAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTAGGCGGCCGCCCCGATaGACAGCGTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: GKPHGTQALSLFMNAILGRRPPR*TASPCR
Trigger: CCTGCATGGGGACGCTGTGCATCGGGGCGGCCGCCT...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCGCGCTGAAGGAGTTCTaGGGTGCCACCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: EKAEIPKPCSALAVRPSIALKEF*GATERP
Trigger: CGGCCGCTCGGTGGCACCGCAGAACTCCTTCAGCGC...GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTGCGCTGAAGGAGTTCTaGGGTGCCACCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: LSGLCQRARHLELHPNRSALKEF*GATERP
Trigger: CGGCCGCTCGGTGGCACCGCAGAACTCCTTCAGCGC...AGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GCAGAGGCTGGTCCTAGGCGTGCGAGATGCCAGGGCCTGAGCAGTATCCACACCAGGTTGTCTGGGCTATaGCAGCGAGCCAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: AEAGPRRARCQGLSSIHTRLSGL*QRARHL
Trigger: AAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCT...GGTGTGGATACTGCTCAGGCCCTGGCATCTCGCACGCCTAGGACCAGCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCAGAGTCCGCACGTTCTaGCTCTTCATGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSVARPLRGCLGYASEPGRVRTF*LFMAAS
Trigger: GCTGGCGGCCATGAAGAGGCAGAACGTGCGGACTCT...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000650269.1
CDS-3UTR GCA 90 bp CCGGGCCCTGCAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGGATGGTGCAGAGGCGTaGATTGAGTTACCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PGPAGGPGERVADGETPRDGAEA*IELPCF
Trigger: GAAACAGGGTAACTCAATGCACGCCTCTGCACCATC...CCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCAGGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGTCCTCGCGCATCTCGTaGTCCGACTCGAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: PSTAEVHLRRQKSRSRVRSSRIS*SDSRAS
Trigger: CGACGCCCTCGAGTCGGACCACGAGATGCGCGAGGA...CCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR CCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAACTCCACTCCTCACACTaGGAGAAGGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSRELHSSH*EKAAAP
Trigger: CGGGGCGGCCGCCTTCTCCCAGTGTGAGGAGTGGAG...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACTCCACTCCTCACACTaGGAGAAGGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSLHSSH*EKAAAP
Trigger: CGGGGCGGCCGCCTTCTCCCAGTGTGAGGAGTGGAG...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTCTGCAGGGCACCCTTaGTCTGCAGGGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: PKPCSALAVRPSIHGRLSSAGHP*SAGPRS
Trigger: ACTACGTGGCCCTGCAGACCAAGGGTGCCCTGCAGA...AGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TGTGGCCGGGGCCATAGAAGGTTTGCTCCCTGGTGCGGTCGCTCACAACCAAAAGGGCAAGCTTGGCGCTaGAGGAGTTCTGCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: CGRGHRRFAPWCGRSQPKGQAWR*RSSAVP
Trigger: TGGCACCGCAGAACTCCTTCAGCGCCAAGCTTGCCC...TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCCGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATGGGCAAGCTTGGCGCTaGAGGAGTTCTGCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: ADGETPRHAGSESVYERDGQAWR*RSSAVP
Trigger: TGGCACCGCAGAACTCCTTCAGCGCCAAGCTTGCCC...ATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp CAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCTCTCTTTGGATGAATaGGTCGGCTCTCAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: QEGQVRELQTGKPHGTQALSLDE*VGSQVD
Trigger: GTCCACCTGAGAGCCGACTCATTCATCCAAAGAGAG...AGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGGAAGGATGAGGCTGCCTCACTTACAGAAGGAGAGAGCTGTCCCCGTCCTCTGGCCTGCACGGTCCTGTaGATGGCAGAGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GKDEAASLTEGESCPRPLACTVL*MAEAGP
Trigger: AGGACCAGCCTCTGCCATTCACAGGACCGTGCAGGC...CAGAGGACGGGGACAGCTCTCTCCTTCTGTAAGTGAGGCAGCCTCATCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGCCTTGCCCGCATCGGTaGCAGGTGCAGCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: AEVHLRRQKSRSRVRLWQPCPHR*QVQRAH
Trigger: ATGGGCACGCTGCACCTGGCACCGATGCGGGCAAGG...CTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCCAGGAGCACACAGACTaGAGGTCCGGGACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LEKAEIPKPCSALAVRPSQEHTD*RSGTSA
Trigger: GGCGGACGTCCCGGACCTGCAGTCTGTGTGCTCCTG...GCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAACAGGAGCACACAGACTaGAGGTCCGGGACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREQEHTD*RSGTSA
Trigger: GGCGGACGTCCCGGACCTGCAGTCTGTGTGCTCCTG...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCGCTGAAGGAGTTCTaGGGTGCCACCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: HSRGPLEKAEIPKPCSALALKEF*GATERP
Trigger: CGGCCGCTCGGTGGCACCGCAGAACTCCTTCAGCGC...CAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCTGGGGCACTGCCCAGTaGTTGCTGCTCCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LEKAEIPKPCSALAVRPSWGTAQ*LLLLWP
Trigger: CGGCCACAGGAGCAGCAAGCACTGGGCAGTGCCCCA...GCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CCGGGCCCTGCAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGCTCCACCAGAAGTGTTaGCACAAGAAAACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PGPAGGPGERVADGETPRLHQKC*HKKTVW
Trigger: CCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG...CCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCAGGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGATCTCCTCGCGCATCTCGTaGTCCGACTCGAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: ERHGQRRRGRSLRGQILISSRIS*SDSRAS
Trigger: CGACGCCCTCGAGTCGGACCACGAGATGCGCGAGGA...GATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000649473.1
CDS-3UTR CCA 90 bp CACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGCTCCACTCCTCACACTaGGAGAAGGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: HSRGPLEKAEIPKPCSALLHSSH*EKAAAP
Trigger: CGGGGCGGCCGCCTTCTCCCAGTGTGAGGAGTGGAG...CAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTGTACCTGGGCCGGCTaGGCCGCGGCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LAGLESQLRLDWFLTATSCTWAG*AAAPQG
Trigger: TCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACA...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTTCTCCACCTCAAAGCTaGAGAGCAACGGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPSPPQS*RATGRP
Trigger: AGGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGA...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTAGAAGGTTTGCTCCCTaGTGCGGTCGCTCACAACCA +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPRRFAP*CGRSQP
Trigger: TGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCT...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTCCTCAGGGATGTGAATaGCCATGCTGTTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPPQGCE*PCCCGF
Trigger: GAAACCGCAACAGCATGGTCATTCACATCCCTGAGG...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCGGGCAAGCTTGGCGCTaGAGGAGTTCTGCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PLEKAEIPKPCSALAVRPGQAWR*RSSAVP
Trigger: TGGCACCGCAGAACTCCTTCAGCGCCAAGCTTGCCC...GGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAGGGCAAGCTTGGCGCTaGAGGAGTTCTGCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREGQAWR*RSSAVP
Trigger: TGGCACCGCAGAACTCCTTCAGCGCCAAGCTTGCCC...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGAGTTCGGCTTTGGCAGTaGGACCCAGCATCCACGGAC +
Preference number: 4 (lower is better)
Translates to: AEIPKPCSALAVRPSIHGVRLWQ*DPASTD
Trigger: GTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAAC...TCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CCTTTATTCTCGCGATGGTCCTTCCGTCTGGGGCACTGCCCAGTGCTTGCTGCTGTTCGGCTTTGGCAGTaGGACCCAGCATCCACGGAC +
Preference number: 4 (lower is better)
Translates to: PLFSRWSFRLGHCPVLAAVRLWQ*DPASTD
Trigger: GTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAAC...AGCAGCAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCGTCACAGCTGAGGCTTaGCTGGTTCCTTACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSVARPLRGCLGYASEPGVTAEA*LVPYSH
Trigger: GTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGAC...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGCGAGGCAGTGGACTTaGACTTCTCAGACGATTTCC +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPARQWT*TSQTIS
Trigger: GGAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGC...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCCCAGGCAGGTGCCGTTaGATCACCAGTGCTATGATG +
Preference number: 4 (lower is better)
Translates to: SSVARPLRGCLGYASEPGPGRCR*ITSAMM
Trigger: CATCATAGCACTGGTGATTCAACGGCACCTGCCTGG...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTCCAGGCAGGTGCCGTTaGATCACCAGTGCTATGATG +
Preference number: 4 (lower is better)
Translates to: PKPCSALAVRPSIHGRLSPGRCR*ITSAMM
Trigger: CATCATAGCACTGGTGATTCAACGGCACCTGCCTGG...AGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCGCCTGCACGGTCCTGTaGATGGCAGAGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EKAEIPKPCSALAVRPSIACTVL*MAEAGP
Trigger: AGGACCAGCCTCTGCCATTCACAGGACCGTGCAGGC...GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTTACACGAGAAGCCTaGGGTTCAGCGAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: PEAVFGFGSETQHPRTPLFTREA*GSARVS
Trigger: GCTTACCCTCGCTGAACCTCAGGCTTCTCGTGTAAA...GAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAACGGTGCGGTTCCGACTaGAGGATCACCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSRERCGSD*RITSSS
Trigger: GCTGGAGCTGGTGATCCTGCAGTCGGAACCGCACCG...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR GCA 90 bp CCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: PSTAEVHLRRQKSRSRVRVSGEG*PLFSIP
Trigger: CGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAAC...CCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TGTGGCCGGGGCCATAGAAGGTTTGCTCCCTGGTGCGGTCGCTCACAACCAAAAGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: CGRGHRRFAPWCGRSQPKVSGEG*PLFSIP
Trigger: CGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAAC...TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCCGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCACAGGAGCACACAGACTaGAGGTCCGGGACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SRGPLEKAEIPKPCSALAQEHTD*RSGTSA
Trigger: GGCGGACGTCCCGGACCTGCAGTCTGTGTGCTCCTG...TGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAGAAGGAGTTCTGCGGTaGCACCGAGCGGCCGCCATA +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSEGVLR*HRAAAI
Trigger: TATGGCGGCCGCTCGGTGGCACCGCAGAACTCCTTC...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCGAAGGAGTTCTGCGGTaGCACCGAGCGGCCGCCATA +
Preference number: 4 (lower is better)
Translates to: GSVRCSVSTSKLESNGETEGVLR*HRAAAI
Trigger: TATGGCGGCCGCTCGGTGGCACCGCAGAACTCCTTC...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGTCTATGTGGCGAGAAGAGCGTGTaGTTGCCTCTCTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: TGLRGPSHRAFLWASCLCGEKSV*LPLSRP
Trigger: GGGCCTTGAGAGAGGCAAGCACACGCTCTTCTCGCC...ACATAGACAGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAGGTGCCCTGGTGACCTaGAGCGTTCAGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSGALVT*SVQPPS
Trigger: TGAAGGGGGCTGAACGCTGCAGGTCACCAGGGCACC...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647605.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTTGCCAGATCGCTGGGTaGCCTGGTGACCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LSGLCQRARHLELHPNRSCQIAG*PGDLQR
Trigger: ACGCTGCAGGTCACCAGGGCACCCAGCGATCTGGCA...AGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGACAGGCACAGGAGGCTaGTCGAGCGCCGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRTGTGG*SSAGAR
Trigger: CCTGGCCCCGGCGCTCGAGCAGCCTCCTGTGCCTGT...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGGTCCCCGTCCTCTGTTaGGGCCGCCTGCACGGTCCT +
Preference number: 4 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKVPVLC*GRLHGP
Trigger: AGGACCGTGCAGGCGGCCCCAACAGAGGACGGGGAC...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGTCAGCCCCCTTCATCTaGGGATGGCTCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: AQHSRGPLEKAEIPKPCSSAPFI*GWLCLV
Trigger: GACCAGGCAGAGCCATCCCCAGATGAAGGGGGCTGA...CGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649696.1
CDS-3UTR CCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAAAGTGGCGGTGTCTCTaGAGTCCCCTGCAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSKWRCL*SPLQAG
Trigger: CCCCGCTTGCAGGGGACTCCAGAGACACCGCCACTT...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGGGTCCAGCTCGCGGGTaGCGGTGCCCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRGPARG*RCPARS
Trigger: GCTCCTTGCTGGGCACCGCCACCCGCGAGCTGGACC...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR TCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTGGGCAAGCTTGGCGCTaGAGGAGTTCTGCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GKPHGTQALSLFMNAILGGQAWR*RSSAVP
Trigger: TGGCACCGCAGAACTCCTTCAGCGCCAAGCTTGCCC...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp CCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTAGTTGTGTAGGGGAATaGGTAGAGCATTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PKPCSALAVRPSIHGRLSSCVGE*VEHSPS
Trigger: GCTGGGCGAATGCTCTACTCATTCCCCTACACAACT...AGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTCGTTCTCTCTTTGGATaGATGAGTCGGCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPRSLFG*MSRLSG
Trigger: ACCTGAGAGCCGACTCATTCATCCAAAGAGAGAACG...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTCACCAAAAGGAAGTGTaGGATGCTCTGTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPHQKEV*DALSPP
Trigger: AGGTGGAGACAGAGCATCTCACACTTCCTTTTGGTG...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCACGGTGCGGTTCCGACTaGAGGATCACCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRGPLEKAEIPKPCSALARCGSD*RITSSS
Trigger: GCTGGAGCTGGTGATCCTGCAGTCGGAACCGCACCG...TGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR GCA 90 bp GGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTACGGTGCGGTTCCGACTaGAGGATCACCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GFGSETQHPRTPLLNVQLRCGSD*RITSSS
Trigger: GCTGGAGCTGGTGATCCTGCAGTCGGAACCGCACCG...TAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR GCA 90 bp GCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATCGCATCGGTGCCAGGTaGAGCGTGCCCATAACCTAT +
Preference number: 4 (lower is better)
Translates to: ADGETPRHAGSESVYERDRIGAR*SVPITY
Trigger: ATAGGTTATGGGCACGCTGCACCTGGCACCGATGCG...ATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTCGCATCGGTGCCAGGTaGAGCGTGCCCATAACCTAT +
Preference number: 4 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSRIGAR*SVPITY
Trigger: ATAGGTTATGGGCACGCTGCACCTGGCACCGATGCG...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREVSGEG*PLFSIP
Trigger: CGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAAC...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: EKAEIPKPCSALAVRPSIVSGEG*PLFSIP
Trigger: CGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAAC...GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGAAGGAGTTCTGCGGTaGCACCGAGCGGCCGCCATA +
Preference number: 4 (lower is better)
Translates to: SRGPLEKAEIPKPCSALAEGVLR*HRAAAI
Trigger: TATGGCGGCCGCTCGGTGGCACCGCAGAACTCCTTC...TGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGGCGCTGAAGGAGTTCTaGGGTGCCACCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRALKEF*GATERP
Trigger: CGGCCGCTCGGTGGCACCGCAGAACTCCTTCAGCGC...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGAGCGCTGAAGGAGTTCTaGGGTGCCACCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GLESQLRLDWFLTATSSRALKEF*GATERP
Trigger: CGGCCGCTCGGTGGCACCGCAGAACTCCTTCAGCGC...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCAGAGCCCGACGGGCTTaGGGGGACCCTCACATCGAG +
Preference number: 4 (lower is better)
Translates to: LAGLESQLRLDWFLTATSRARRA*GDPHIE
Trigger: CTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGCTGCCCAGTGCTTGCTaGTCCTGTGGCCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKLPSAC*SCGRGH
Trigger: ATGGCCCCGGCCACAGGAGCAGCAAGCACTGGGCAG...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CCTTTATTCTCGCGATGGTCCTTCCGTCTGGGGCACTGCCCAGTGCTTGCTGCTGCTCCCATAGTCTGGTaGCATCCCTGTACCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PLFSRWSFRLGHCPVLAAAPIVW*HPCTGL
Trigger: AAGGCCGGTACAGGGATGGCACCAGACTATGGGAGC...AGCAGCAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGCGAGAAGAGCGTGTaGTTGCCTCTCTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: KAEIPKPCSALAVRPSIHGEKSV*LPLSRP
Trigger: GGGCCTTGAGAGAGGCAAGCACACGCTCTTCTCGCC...GTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCATGGAAAACACAAGCTaGCAGATCGCTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: IPKPCSALAVRPSIHGRLMENTS*QIAGCP
Trigger: AGGGCACCCAGCGATCTGGCAGCTTGTGTTTTCCAT...GAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649696.1
CDS-3UTR GCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAACGGGCGCTACGTGCGTaGGCGCCGTTGGGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQRALRA*APLGAR
Trigger: TCGGGCTCCCAACGGCGCGCACGCACGTAGCGCCCG...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CCA 90 bp AGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGTCTGCAGGGCACCCTTaGTCTGCAGGGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: RELQTGKPHGTQALSLFMSAGHP*SAGPRS
Trigger: ACTACGTGGCCCTGCAGACCAAGGGTGCCCTGCAGA...CATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTCGTTCTGCCTCTTCATaGCCGCCAGCAAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GKPHGTQALSLFMNAILGRSASS*PPARSR
Trigger: CCGGCTCCTTGCTGGCGGCCATGAAGAGGCAGAACG...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000650269.1
CDS-3UTR CCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCATCCAGCCCTGTTGTATaGGGCACACTCCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSSSPVV*GTLHPA
Trigger: GGCAGGGTGGAGTGTGCCCCATACAACAGGGCTGGA...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGGCACGGTCCTGTGAATaGCAGAGGCTGGTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: AEVHLRRQKSRSRVRLWQARSCE*QRLVLG
Trigger: GCCTAGGACCAGCCTCTGCCATTCACAGGACCGTGC...CTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTAGCAGCAGGACCACCTaGCATCTGTATGACTCAGAG +
Preference number: 4 (lower is better)
Translates to: PKPCSALAVRPSIHGRLSSSRTT*HLYDSE
Trigger: CTCTGAGTCATACAGATGCCAGGTGGTCCTGCTGCT...AGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAATCAGCCCCCTTCATCTaGGGATGGCTCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSRESAPFI*GWLCLV
Trigger: GACCAGGCAGAGCCATCCCCAGATGAAGGGGGCTGA...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647605.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTAGCAGGTCTTCCCTTTaGGGTCATCCCCTATTGAGA +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPSRSSL*GHPLLR
Trigger: TCTCAATAGGGGATGACCCCAAAGGGAAGACCTGCT...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAAGGCCCGGTACCCCTGTaGGTCCAGCTCGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQGPVPL*VQLAGG
Trigger: GCCACCCGCGAGCTGGACCCACAGGGGTACCGGGCC...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR TCA 90 bp GCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATGGATCCAGGGAAGGATaGGGCTGCCTCACTTACAGA +
Preference number: 4 (lower is better)
Translates to: ADGETPRHAGSESVYERDGSREG*GCLTYR
Trigger: TCTGTAAGTGAGGCAGCCTCATCCTTCCCTGGATCC...ATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp ATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTGCAGAGGCGTGCATTaGGTTACCCTGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: IPKPCSALAVRPSIHGRLCRGVH*VTLFPL
Trigger: AAGTGGAAACAGGGTAACTCAATGCACGCCTCTGCA...GAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGTTAAAGTCCCCTCAGTaGATCTGGAGGTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: AERARRACGDPHIERFSGLKSPQ*IWRSNC
Trigger: ACAGTTTGACCTCCAGATTCACTGAGGGGACTTTAA...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGATCTCGTTGGGGCCTTaGGACAGGCCAGTAAACCGT +
Preference number: 4 (lower is better)
Translates to: RNPEAVFGFGSETQHPRTISLGP*DRPVNR
Trigger: ACGGTTTACTGGCCTGTCTCAAGGCCCCAACGAGAT...CGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCCGAAAGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGTTTTCAGAGGAGTCTTaGATGCTCCAGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AERARRACGDPHIERFSGFSEES*MLQCFS
Trigger: GCTGAAACACTGGAGCATTCAAGACTCCTCTGAAAA...CCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTTTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGCAGTTAGTTCCCCTTaGAGGTTGAGAACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPAVSSP*RLRTVN
Trigger: GTTGACAGTTCTCAACCTTCAAGGGGAACTAACTGC...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGTGGACGCCGGCGCGGTaGGGTTCCGACTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWWTPAR*GSDCRI
Trigger: GATCCTGCAGTCGGAACCGCACCGCGCCGGCGTCCA...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR GCA 90 bp CTCCACCAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACTGGACGCCGGCGCGGTaGGGTTCCGACTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LHQKCCHKKTVWTQFPDDWTPAR*GSDCRI
Trigger: GATCCTGCAGTCGGAACCGCACCGCGCCGGCGTCCA...GTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000649473.1
CDS-3UTR GCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACGCATCGGTGCCAGGTaGAGCGTGCCCATAACCTAT +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSRIGAR*SVPITY
Trigger: ATAGGTTATGGGCACGCTGCACCTGGCACCGATGCG...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR GCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACCCTTGCCCGCATCGGTaGCAGGTGCAGCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHPCPHR*QVQRAH
Trigger: ATGGGCACGCTGCACCTGGCACCGATGCGGGCAAGG...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAGCACGGCGTAGAACATaGAGAAGGCCTTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSARRRT*RRPCPH
Trigger: ATGCGGGCAAGGCCTTCTGCATGTTCTACGCCGTGC...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACCAGGAGCACACAGACTaGAGGTCCGGGACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHQEHTD*RSGTSA
Trigger: GGCGGACGTCCCGGACCTGCAGTCTGTGTGCTCCTG...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGAAGGCTGAGCGTGATGTaGAGCTTTGGGGTGGGTATC +
Preference number: 4 (lower is better)
Translates to: AEIPKPCSALAVRPSIHGRLSVM*SFGVGI
Trigger: GATACCCACCCCAAAGCTGCACATCACGCTCAGCCT...TCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGCCACAGCAGGGACACTaGGTCACGATAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: AEVHLRRQKSRSRVRLWQPQQGH*VTIAAL
Trigger: CAGTGCTGCTATCGTGACGCAGTGTCCCTGCTGTGG...CTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATAGAAGAGCGTGTGCTTaGCTCTCTCAAGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: ADGETPRHAGSESVYERDRRACA*LSQGPR
Trigger: TCTGGGGCCTTGAGAGAGGCAAGCACACGCTCTTCT...ATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTCCTCGCGCATCTCGTaGTCCGACTCGAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRSSRIS*SDSRAS
Trigger: CGACGCCCTCGAGTCGGACCACGAGATGCGCGAGGA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR CCA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTCTCCACTCCTCACACTaGGAGAAGGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPLHSSH*EKAAAP
Trigger: CGGGGCGGCCGCCTTCTCCCAGTGTGAGGAGTGGAG...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp ACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGTCTGCAGGGCACCCTTaGTCTGCAGGGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: TAEVHLRRQKSRSRVRLWSAGHP*SAGPRS
Trigger: ACTACGTGGCCCTGCAGACCAAGGGTGCCCTGCAGA...CCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAATGTACCTGGGCCGGCTaGGCCGCGGCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQCTWAG*AAAPQG
Trigger: TCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACA...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACCGTCCGCCTTGTACCTaGGCCGGCTGGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHRPPCT*AGWAAA
Trigger: AGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGACG...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCCGTTTCATCAGCCTCTaGTGGTCGGTAAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSVARPLRGCLGYASEPGRFISL*WSVKLC
Trigger: ACACAGCTTTACCGACCACCAGAGGCTGATGAAACG...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp CAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGCCGTCCCCGTCCTCTGTTaGGGCCGCCTGCACGGTCCT +
Preference number: 4 (lower is better)
Translates to: QVKTCLNHGDKWPFGQDAVPVLC*GRLHGP
Trigger: AGGACCGTGCAGGCGGCCCCAACAGAGGACGGGGAC...GGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAGGATGAGGCTGCCTCACTTACAGAAGGAGAGAGCTGTCCCCGTCCTCTGCAGCTGAGGCTTGACTaGTTCCTTACAGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GKDEAASLTEGESCPRPLQLRLD*FLTATS
Trigger: GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTG...CAGAGGACGGGGACAGCTCTCTCCTTCTGTAAGTGAGGCAGCCTCATCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACTGTCTCCGTGGTCTTaGTCTCACATCTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSLSPWS*SHICPG
Trigger: CCCGGGACAGATGTGAGACCAAGACCACGGAGACAG...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCCTGTCTCCGTGGTCTTaGTCTCACATCTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: PLEKAEIPKPCSALAVRPLSPWS*SHICPG
Trigger: CCCGGGACAGATGTGAGACCAAGACCACGGAGACAG...GGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCACTGGCAAGCTAAGATaGTTTGGGTCGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: IPKPCSALAVRPSIHGRLTGKLR*FGSSCP
Trigger: TGGGCAAGACGACCCAAACCATCTTAGCTTGCCAGT...GAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTCTCCACCTCAAAGCTaGAGAGCAACGGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSSPPQS*RATGRP
Trigger: AGGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGA...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTGATGGTCCTTCCGTCTaGGGCACTGCCCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GKPHGTQALSLFMNAILGDGPSV*GTAQCL
Trigger: CAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATC...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TGTGGCCGGGGCCATAGAAGGTTTGCTCCCTGGTGCGGTCGCTCACAACCAAAACCTTTATTCTCGCGATaGTCCTTCCGTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: CGRGHRRFAPWCGRSQPKPLFSR*SFRLGH
Trigger: GTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGG...TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCCGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACCCCCACGCCGCTCTCTaGAGGCGAGAAGAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHPHAAL*RREERV
Trigger: CACACGCTCTTCTCGCCTCCAGAGAGCGGCGTGGGG...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATTCTGGGAGATCTCGTTaGGGCCTTGAGACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AFKRLSGLCQRARHLELHSGRSR*GLETGQ
Trigger: CTGGCCTGTCTCAAGGCCCCAACGAGATCTCCCAGA...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTCTGGGAGATCTCGTTaGGGCCTTGAGACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AEVHLRRQKSRSRVRLWQSGRSR*GLETGQ
Trigger: CTGGCCTGTCTCAAGGCCCCAACGAGATCTCCCAGA...CTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCCCAAATGCTTGGGACTaGTGGCATTCAGGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: SSVARPLRGCLGYASEPGPNAWD*WHSGVV
Trigger: GACAACACCTGAATGCCACCAGTCCCAAGCATTTGG...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 72 bp CTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTaGGCAGTGAGACCCAGCATCCACGGACGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LEKAEIPKPCSA*AVRPSIHGRLS
Trigger: AGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTCCTCAGGGATGTGAATaGCCATGCTGTTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSPQGCE*PCCCGF
Trigger: GAAACCGCAACAGCATGGTCATTCACATCCCTGAGG...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp GCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGCAGCAGAGGTCCACTTaGGAAGGCAGAAATCCCGAA +
Preference number: 4 (lower is better)
Translates to: AQHSRGPLEKAEIPKPCSQQRST*EGRNPE
Trigger: TTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTG...CGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCAGCAGAGGTCCACTTaGGAAGGCAGAAATCCCGAA +
Preference number: 4 (lower is better)
Translates to: RNPEAVFGFGSETQHPRTQQRST*EGRNPE
Trigger: TTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTG...CGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCGGATCCAGGGAAGGATaGGGCTGCCTCACTTACAGA +
Preference number: 4 (lower is better)
Translates to: LEKAEIPKPCSALAVRPSGSREG*GCLTYR
Trigger: TCTGTAAGTGAGGCAGCCTCATCCTTCCCTGGATCC...GCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp ACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGTCTATGTCTCTCTTTGGATGAATaGGTCGGCTCTCAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TGLRGPSHRAFLWASCLCLSLDE*VGSQVD
Trigger: GTCCACCTGAGAGCCGACTCATTCATCCAAAGAGAG...ACATAGACAGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CTCTTTCTAGGGAGCAAAGCCTCCTTTCTGGGAGATCTCGTTGGGGCCTTGAGAGCGAGCCAGGCACCTTaGGCTCCATCCAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: LFLGSKASFLGDLVGALRASQAP*APSKPF
Trigger: GAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGC...TCTCAAGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGCTCCCTAGAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGATGCAGGAGGGCCAGGTaGGAGAGTTGCAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: GLESQLRLDWFLTATSSRCRRAR*ESCRRG
Trigger: TCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCA...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TCAAAGCTGGAGAGCAACGGGGAGACCTTCCAGGTAGTGGGAACGGCACGGGCACACCAAAAGGAAGTGTaGGATGCTCTGTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SKLESNGETFQVVGTARAHQKEV*DALSPP
Trigger: AGGTGGAGACAGAGCATCTCACACTTCCTTTTGGTG...TGCCCGTGCCGTTCCCACTACCTGGAAGGTCTCCCCGTTGCTCTCCAGCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCTGTACCGGCCTTATaGGAAATACCTGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: AFKRLSGLCQRARHLELHPVPAL*EIPGVA
Trigger: TGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGG...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGATTTACACGAGAAGCCTaGGGTTCAGCGAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: AEIPKPCSALAVRPSIHGFTREA*GSARVS
Trigger: GCTTACCCTCGCTGAACCTCAGGCTTCTCGTGTAAA...TCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACCGGTGCGGTTCCGACTaGAGGATCACCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHRCGSD*RITSSS
Trigger: GCTGGAGCTGGTGATCCTGCAGTCGGAACCGCACCG...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CTTCAGCAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAATGGACGCCGGCGCGGTaGGGTTCCGACTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LQQVKTCLNHGDKWPFGQWTPAR*GSDCRI
Trigger: GATCCTGCAGTCGGAACCGCACCGCGCCGGCGTCCA...TTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTGCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000649473.1
CDS-3UTR GCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCCTTGCCCGCATCGGTaGCAGGTGCAGCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWPCPHR*QVQRAH
Trigger: ATGGGCACGCTGCACCTGGCACCGATGCGGGCAAGG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGAACCTTGCCCGCATCGGTaGCAGGTGCAGCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RFLVGEADSFELRGSGLEPCPHR*QVQRAH
Trigger: ATGGGCACGCTGCACCTGGCACCGATGCGGGCAAGG...TTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCACGGCGTAGAACATaGAGAAGGCCTTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: HSRGPLEKAEIPKPCSALARRRT*RRPCPH
Trigger: ATGCGGGCAAGGCCTTCTGCATGTTCTACGCCGTGC...CAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACGAAGGAGTTCTGCGGTaGCACCGAGCGGCCGCCATA +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHEGVLR*HRAAAI
Trigger: TATGGCGGCCGCTCGGTGGCACCGCAGAACTCCTTC...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAAGCGCTGAAGGAGTTCTaGGGTGCCACCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQALKEF*GATERP
Trigger: CGGCCGCTCGGTGGCACCGCAGAACTCCTTCAGCGC...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAAGGTTGTCTGGGCTATaGCAGCGAGCCAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: SRGPLEKAEIPKPCSALARLSGL*QRARHL
Trigger: AAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCT...TGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTAGGTTGTCTGGGCTATaGCAGCGAGCCAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: GKPHGTQALSLFMNAILGRLSGL*QRARHL
Trigger: AAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCT...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CCTTTATTCTCGCGATGGTCCTTCCGTCTGGGGCACTGCCCAGTGCTTGCTGCTAGGTTTGCTCCCTGGTaGGGTCGCTCACAACCAAAA +
Preference number: 4 (lower is better)
Translates to: PLFSRWSFRLGHCPVLAARFAPW*GRSQPK
Trigger: TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCT...AGCAGCAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTACTGAGTCACTCATGGTaGATGTCCCCATCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GFGSETQHPRTPLLNVQLLSHSW*MSPSPR
Trigger: GCGAGGGGATGGGGACATGCACCATGAGTGACTCAG...TAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCTGAGTCACTCATGGTaGATGTCCCCATCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: TAEVHLRRQKSRSRVRLWLSHSW*MSPSPR
Trigger: GCGAGGGGATGGGGACATGCACCATGAGTGACTCAG...CCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTGCCAGATCGCTGGGTaGCCTGGTGACCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRCQIAG*PGDLQR
Trigger: ACGCTGCAGGTCACCAGGGCACCCAGCGATCTGGCA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647605.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACGCTCGCGGGTGGCGGTaGCCAGCAAGGAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHARGWR*PARSLQ
Trigger: CTGCAGGCTCCTTGCTGGGCACCGCCACCCGCGAGC...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATGGAACCCCGACACCCTaGGCCAGACCCGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDGTPTP*ARPGRS
Trigger: GCTTCGGCCGGGTCTGGCGCAGGGTGTCGGGGTTCC...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTACGTCCGCCTTGTACCTaGGCCGGCTGGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLRPPCT*AGWAAA
Trigger: AGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGACG...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCATGATGATGAATGAGTaGAAGGGCTTGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PEAVFGFGSETQHPRTPLMMMNE*KGLAVS
Trigger: AGAGACTGCCAAGCCCTTCCACTCATTCATCATCAT...GAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCAGCTGAGGCTTGACTaGTTCCTTACAGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: EKAEIPKPCSALAVRPSIQLRLD*FLTATS
Trigger: GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTG...GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACACGTTCTGCCTCTTCATaGCCGCCAGCAAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTRSASS*PPARSR
Trigger: CCGGCTCCTTGCTGGCGGCCATGAAGAGGCAGAACG...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000650269.1
CDS-3UTR CCA 90 bp AGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGTGTGCAGCTTTGGGGTaGGTATCCTCTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RNPEAVFGFGSETQHPRTCAALG*VSSQLC
Trigger: ACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACA...CGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCCGTGATGTGCAGCTTTaGGGTGGGTATCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSVRCSVSTSKLESNGETRDVQL*GGYPLS
Trigger: GCTGAGAGGATACCCACCCCAAAGCTGCACATCACG...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACAAGCTAAGATGGTTTaGGTCGTCTTGCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSQAKMV*VVLPTR
Trigger: GCGGGTGGGCAAGACGACCCAAACCATCTTAGCTTG...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTCTCATAGATCTGGATTaGTTTCCAGGGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PKPCSALAVRPSIHGRLSLIDLD*FPGMVQ
Trigger: CTGCACCATCCCTGGAAACCAATCCAGATCTATGAG...AGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATGAGAAATACCTGGCGTaGCAGCTTCCAGCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: AFKRLSGLCQRARHLELHEKYLA*QLPALL
Trigger: CAACAGGGCTGGAAGCTGCCACGCCAGGTATTTCTC...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGCCTCAGGGATGTGAATaGCCATGCTGTTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: AEVHLRRQKSRSRVRLWQPQGCE*PCCCGF
Trigger: GAAACCGCAACAGCATGGTCATTCACATCCCTGAGG...CTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCCCTCAGGGATGTGAATaGCCATGCTGTTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: GSVRCSVSTSKLESNGETPQGCE*PCCCGF
Trigger: GAAACCGCAACAGCATGGTCATTCACATCCCTGAGG...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCTCTCTTTGGATGAATaGGTCGGCTCTCAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AFKRLSGLCQRARHLELHLSLDE*VGSQVD
Trigger: GTCCACCTGAGAGCCGACTCATTCATCCAAAGAGAG...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp AGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGGCGAGGCAGTGGACTTaGACTTCTCAGACGATTTCC +
Preference number: 4 (lower is better)
Translates to: RELQTGKPHGTQALSLFMARQWT*TSQTIS
Trigger: GGAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGC...CATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp AAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGCGAGGCAGTGGACTTaGACTTCTCAGACGATTTCC +
Preference number: 4 (lower is better)
Translates to: KAEIPKPCSALAVRPSIHARQWT*TSQTIS
Trigger: GGAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGC...GTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGATGACTCAGAGGCACTaGGCCTGGAAACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LRRFPQLSSDRPSSSVARMTQRH*AWKQTQ
Trigger: CTGGGTCTGTTTCCAGGCTCAGTGCCTCTGAGTCAT...CCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TGGGAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGGTTCCCCTTGAAGGTTaGGAACTGTCAACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: WERHGQRRRGRSLRGQILVPLEG*ELSTLA
Trigger: GGCCAAAGTTGACAGTTCTCAACCTTCAAGGGGAAC...CAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGAGGCGGCCGCCCCGATaGACAGCGTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: RSGFLSEAGAILIQPLPLRRPPR*TASPCR
Trigger: CCTGCATGGGGACGCTGTGCATCGGGGCGGCCGCCT...CAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRVSGEG*PLFSIP
Trigger: CGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAAC...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGAGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: GLESQLRLDWFLTATSSRVSGEG*PLFSIP
Trigger: CGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAAC...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGGAAGGAGTTCTGCGGTaGCACCGAGCGGCCGCCATA +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWEGVLR*HRAAAI
Trigger: TATGGCGGCCGCTCGGTGGCACCGCAGAACTCCTTC...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCAGCGCTGAAGGAGTTCTaGGGTGCCACCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ARSGFLSEAGAILIQPLPALKEF*GATERP
Trigger: CGGCCGCTCGGTGGCACCGCAGAACTCCTTCAGCGC...TGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGTATTTCCCTTTGGCCTaGTCTGTCTGGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PSTAEVHLRRQKSRSRVRYFPLA*SVWLER
Trigger: CCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATA...CCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCAGGTTTGCTCCCTGGTaGGGTCGCTCACAACCAAAA +
Preference number: 4 (lower is better)
Translates to: GSVRCSVSTSKLESNGETRFAPW*GRSQPK
Trigger: TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCT...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCCTGCCCAGTGCTTGCTaGTCCTGTGGCCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPLPSAC*SCGRGH
Trigger: ATGGCCCCGGCCACAGGAGCAGCAAGCACTGGGCAG...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCGCACTGCCCAGTGCTTaGTGCTCCTGTGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIALPSA*CSCGRG
Trigger: GCCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGC...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CTCTTTCTAGGGAGCAAAGCCTCCTTTCTGGGAGATCTCGTTGGGGCCTTGAGACTGAGTCACTCATGGTaGATGTCCCCATCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: LFLGSKASFLGDLVGALRLSHSW*MSPSPR
Trigger: GCGAGGGGATGGGGACATGCACCATGAGTGACTCAG...TCTCAAGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGCTCCCTAGAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCAGAAGAGCGTGTGCTTaGCTCTCTCAAGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSQVDLAGLESQLRLDWFRRACA*LSQGPR
Trigger: TCTGGGGCCTTGAGAGAGGCAAGCACACGCTCTTCT...GAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTCAAGGTCCATTTCCATaGAAGAGCCATGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPQGPFP*KSHELH
Trigger: ATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTG...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAATCCTCGCGCATCTCGTaGTCCGACTCGAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQSSRIS*SDSRAS
Trigger: CGACGCCCTCGAGTCGGACCACGAGATGCGCGAGGA...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR CCA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCTCCTCGCGCATCTCGTaGTCCGACTCGAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPSSRIS*SDSRAS
Trigger: CGACGCCCTCGAGTCGGACCACGAGATGCGCGAGGA...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000649473.1
CDS-3UTR CCA 90 bp GCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTCCACTCCTCACACTaGGAGAAGGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: ARSGFLSEAGAILIQPLPLHSSH*EKAAAP
Trigger: CGGGGCGGCCGCCTTCTCCCAGTGTGAGGAGTGGAG...TGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp ACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACCGGCCTTATGAGTCTGCAGGGCACCCTTaGTCTGCAGGGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: TSQVCSHSLVPSLYRPYESAGHP*SAGPRS
Trigger: ACTACGTGGCCCTGCAGACCAAGGGTGCCCTGCAGA...CTCATAAGGCCGGTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATGTACCTGGGCCGGCTaGGCCGCGGCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLCTWAG*AAAPQG
Trigger: TCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACA...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTACGTCCGCCTTGTACCTaGGCCGGCTGGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVRPPCT*AGWAAA
Trigger: AGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGACG...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAGGATGAGGCTGCCTCACTTACAGAAGGAGAGAGCTGTCCCCGTCCTCTGATGAGTGGAAGGGCTTaGCAGTCTCTACTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: GKDEAASLTEGESCPRPLMSGRA*QSLLLV
Trigger: AACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCAT...CAGAGGACGGGGACAGCTCTCTCCTTCTGTAAGTGAGGCAGCCTCATCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTCCCCGTCCTCTGTTaGGGCCGCCTGCACGGTCCT +
Preference number: 4 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSVPVLC*GRLHGP
Trigger: AGGACCGTGCAGGCGGCCCCAACAGAGGACGGGGAC...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp CCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGGTCTGGCTGGAAAGGTaGGGGAAAATGAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: PSTAEVHLRRQKSRSRVRVWLER*GKMRPR
Trigger: TCTTGGTCTCATTTTCCCCCACCTTTCCAGCCAGAC...CCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTATTGGCCTGCTCTGTCTaGCTGGAAAGGTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GFGSETQHPRTPLLNVQLLACSV*LERWGK
Trigger: TTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAA...TAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCCTTATGAGAAATACCTaGCGTGGCAGCTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GSVRCSVSTSKLESNGETLMRNT*RGSFQP
Trigger: GGGCTGGAAGCTGCCACGCCAGGTATTTCTCATAAG...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACGCACGGTCCTGTGAATaGCAGAGGCTGGTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHARSCE*QRLVLG
Trigger: GCCTAGGACCAGCCTCTGCCATTCACAGGACCGTGC...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATAGCAGCAGGACCACCTaGCATCTGTATGACTCAGAG +
Preference number: 4 (lower is better)
Translates to: AFKRLSGLCQRARHLELHSSRTT*HLYDSE
Trigger: CTCTGAGTCATACAGATGCCAGGTGGTCCTGCTGCT...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACAGCAGCAGGACCACCTaGCATCTGTATGACTCAGAG +
Preference number: 4 (lower is better)
Translates to: KAEIPKPCSALAVRPSIHSSRTT*HLYDSE
Trigger: CTCTGAGTCATACAGATGCCAGGTGGTCCTGCTGCT...GTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTAATGCTTGGGACTGGTaGCATTCAGGTGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSNAWDW*HSGVVS
Trigger: GGAGACAACACCTGAATGCCACCAGTCCCAAGCATT...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp ACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGTGTTGTACTTCCCCTTaGTCCGGATCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: TAEVHLRRQKSRSRVRLWCCTSP*SGSPRL
Trigger: AAGCCGAGGAGATCCGGATCAAGGGGAAGTACAACA...CCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR TCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAAGGGCAAGCTTGGCGCTaGAGGAGTTCTGCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQGQAWR*RSSAVP
Trigger: TGGCACCGCAGAACTCCTTCAGCGCCAAGCTTGCCC...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCAGCAGAGGTCCACTTaGGAAGGCAGAAATCCCGAA +
Preference number: 4 (lower is better)
Translates to: GSQVDLAGLESQLRLDWFQQRST*EGRNPE
Trigger: TTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTG...GAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCGCTCTAGACACATTTTaGAAAGCGAGATCTGGATTT +
Preference number: 4 (lower is better)
Translates to: PEAVFGFGSETQHPRTPLALDTF*KARSGF
Trigger: AAATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGC...GAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCGTCACAGCTGAGGCTTaGCTGGTTCCTTACAGCCAC +
Preference number: 4 (lower is better)
Translates to: LAGLESQLRLDWFLTATSVTAEA*LVPYSH
Trigger: GTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGAC...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp ACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTGCAGGAGGGCCAGGTaGGAGAGTTGCAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: TVISGHLGKMPDISVPLFCRRAR*ESCRRG
Trigger: TCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCA...GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTCCAACTTCTTCAGAGTaGCATCACAAGTATGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSPTSSE*HHKYAP
Trigger: GGGAGCATACTTGTGATGTCACTCTGAAGAAGTTGG...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACCCTTGCCCGCATCGGTaGCAGGTGCAGCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHPCPHR*QVQRAH
Trigger: ATGGGCACGCTGCACCTGGCACCGATGCGGGCAAGG...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACCTTGCCCGCATCGGTaGCAGGTGCAGCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: ARSGFLSEAGAILIQPLPPCPHR*QVQRAH
Trigger: ATGGGCACGCTGCACCTGGCACCGATGCGGGCAAGG...TGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGACATGCAGAAGGCCTTaGCCGCATCGGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWTCRRP*PHRCQV
Trigger: CACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGT...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATCAGGAGCACACAGACTaGAGGTCCGGGACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDQEHTD*RSGTSA
Trigger: GGCGGACGTCCCGGACCTGCAGTCTGTGTGCTCCTG...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CTTCAGCAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGAAGGAGTTCTGCGGTaGCACCGAGCGGCCGCCATA +
Preference number: 4 (lower is better)
Translates to: LQQVKTCLNHGDKWPFGQEGVLR*HRAAAI
Trigger: TATGGCGGCCGCTCGGTGGCACCGCAGAACTCCTTC...TTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCATATTTCCCTTTGGCCTaGTCTGTCTGGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSYFPLA*SVWLER
Trigger: CCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATA...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTATGCAGGGTAGGTGCTaGACAAAATCATCAATAAGA +
Preference number: 4 (lower is better)
Translates to: RARRACGDPHIERFSGLPMQGRC*TKSSIR
Trigger: TCTTATTGATGATTTTGTGCAGCACCTACCCTGCAT...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACCGGCCTTATGAGCCACAGCAGGGACACTaGGTCACGATAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: TSQVCSHSLVPSLYRPYEPQQGH*VTIAAL
Trigger: CAGTGCTGCTATCGTGACGCAGTGTCCCTGCTGTGG...CTCATAAGGCCGGTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TCAAAGCTGGAGAGCAACGGGGAGACCTTCCAGGTAGTGGGAACGGCACGGGCAAAAGGAAGTGTGAGATaGTCTGTCTCCACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SKLESNGETFQVVGTARAKGSVR*SVSTSK
Trigger: CTTTGAGGTGGAGACAGAGCATCTCACACTTCCTTT...TGCCCGTGCCGTTCCCACTACCTGGAAGGTCTCCCCGTTGCTCTCCAGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTAGGTTTGCTCCCTGGTaGGGTCGCTCACAACCAAAA +
Preference number: 4 (lower is better)
Translates to: GKPHGTQALSLFMNAILGRFAPW*GRSQPK
Trigger: TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCT...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTTGGGGCACTGCCCAGTaGTTGCTGCTCCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SGLELLRRFPQLSSDRPSWGTAQ*LLLLWP
Trigger: CGGCCACAGGAGCAGCAAGCACTGGGCAGTGCCCCA...AGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCGCCATTTGGGCAAGATaGCAGACATCTCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PLEKAEIPKPCSALAVRPAIWAR*QTSQCL
Trigger: AAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGC...GGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCTTTAAGAGCTCCCATAGTCTGGTaGCATCCCTGTACCGGCCTT +
Preference number: 4 (lower is better)
Translates to: FPQLSSDRPSSSVARPLRAPIVW*HPCTGL
Trigger: AAGGCCGGTACAGGGATGGCACCAGACTATGGGAGC...TCTTAAAGGCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGTCTATGTCAGAGGAGTCTTGAATaGTCCAGTGTTTCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: TGLRGPSHRAFLWASCLCQRSLE*SSVSAH
Trigger: ATGGGCTGAAACACTGGAGCATTCAAGACTCCTCTG...ACATAGACAGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAACCGGTGCGCGAAGTTTaGTCGGCTCAACCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQPVREV*SAQPPR
Trigger: CCTTGGGGGTTGAGCCGAGCAAACTTCGCGCACCGG...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTCACTGCGCAGGGCCATaGAGGGCGGCCCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFHCAGP*RAAPLG
Trigger: ACCCAGCGGGGCCGCCCTGCATGGCCCTGCGCAGTG...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGTCTGCAGGGCACCCTTaGTCTGCAGGGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWSAGHP*SAGPRS
Trigger: ACTACGTGGCCCTGCAGACCAAGGGTGCCCTGCAGA...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATTCTGCAGGGCACCCTTaGTCTGCAGGGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: KTCLNHGDKWPFGQDARHSAGHP*SAGPRS
Trigger: ACTACGTGGCCCTGCAGACCAAGGGTGCCCTGCAGA...ATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTATGTACCTGGGCCGGCTaGGCCGCGGCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVCTWAG*AAAPQG
Trigger: TCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACA...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATCGTCCGCCTTGTACCTaGGCCGGCTGGGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNRPPCT*AGWAAA
Trigger: AGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGACG...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAGGATGAGGCTGCCTCACTTACAGAAGGAGAGAGCTGTCCCCGTCCTCTGTTCATCAGCCTCTGGTaGTCGGTAAAGCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GKDEAASLTEGESCPRPLFISLW*SVKLCN
Trigger: GTTACACAGCTTTACCGACCACCAGAGGCTGATGAA...CAGAGGACGGGGACAGCTCTCTCCTTCTGTAAGTGAGGCAGCCTCATCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGCGTTTCATCAGCCTCTaGTGGTCGGTAAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AEVHLRRQKSRSRVRLWQRFISL*WSVKLC
Trigger: ACACAGCTTTACCGACCACCAGAGGCTGATGAAACG...CTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACGTTTCATCAGCCTCTaGTGGTCGGTAAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSRFISL*WSVKLC
Trigger: ACACAGCTTTACCGACCACCAGAGGCTGATGAAACG...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCCTGTCTATGTGTAGCTaGACCATCCCCACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PLEKAEIPKPCSALAVRPLSMCS*TIPTVV
Trigger: CACAACTGTGGGGATGGTCCAGCTACACATAGACAG...GGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGATGAGTGGAAGGGCTTaGCAGTCTCTACTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RELQTGKPHGTQALSLFMMSGRA*QSLLLV
Trigger: AACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCAT...CATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAACGTTCTGCCTCTTCATaGCCGCCAGCAAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQRSASS*PPARSR
Trigger: CCGGCTCCTTGCTGGCGGCCATGAAGAGGCAGAACG...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520439.3
ENST00000648164.1
CDS-3UTR CCA 90 bp TTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTTCAGCTCTGTCTCCGTaGTCTTGGTCTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: LSGLCQRARHLELHPNRSSALSP*SWSHIC
Trigger: ACAGATGTGAGACCAAGACCACGGAGACAGAGCTGA...AGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACTCAGCTCTGTCTCCGTaGTCTTGGTCTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: KAEIPKPCSALAVRPSIHSALSP*SWSHIC
Trigger: ACAGATGTGAGACCAAGACCACGGAGACAGAGCTGA...GTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAACTGGCAAGCTAAGATaGTTTGGGTCGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSRETGKLR*FGSSCP
Trigger: TGGGCAAGACGACCCAAACCATCTTAGCTTGCCAGT...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGAAATCACGGTGATAAGTaGCCATTTGGGCAAGATGCC +
Preference number: 4 (lower is better)
Translates to: AEIPKPCSALAVRPSIHGNHGDK*PFGQDA
Trigger: GGCATCTTGCCCAAATGGCCACTTATCACCGTGATT...TCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGTATGCTCCCATAGTCTaGTGCCATCCCTGTACCGGC +
Preference number: 4 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKYAPIV*CHPCTG
Trigger: GCCGGTACAGGGATGGCACCAGACTATGGGAGCATA...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGAAGGCCCTGTGTCCTaGACGAAGGGGAAATTTCAA +
Preference number: 4 (lower is better)
Translates to: HSPSTAEVHLRRQKSRSREGPVS*TKGKFQ
Trigger: TTGAAATTTCCCCTTCGTCCAGGACACAGGGCCTTC...ACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCGAGAACTGTCAACTTTaGCCTAGAGAATCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: IPKPCSALAVRPSIHGRLENCQL*PRESEV
Trigger: AACCTCAGATTCTCTAGGCCAAAGTTGACAGTTCTC...GAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 72 bp GCTTCCTGTCTATGTGTAGCTGGACCATCCCCACAGTaGTGTAGGGGAATGAGTAGAGCATTCGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ASCLCVAGPSPQ*CRGMSRAFAQH
Trigger: GTGCTGGGCGAATGCTCTACTCATTCCCCTACACAACTGTGGGGATGGTCCAGCTACACATAGACAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CAA 72 bp AGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTaGAGCTCCATCCAAACCGTTCTCTCTTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: RGCLGYASEPGT*SSIQTVLSLDE
Trigger: TTCATCCAAAGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR CAA 72 bp TGTGAGTTTCAGAGGAGGATGGGCCTGTATTTCCCTTaGGCCTGCTCTGTCTGGCTGGAAAGGTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: CEFQRRMGLYFP*ACSVWLERWGK
Trigger: TTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCCCATCCTCCTCTGAAACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CGCGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGCCTCAGGGATGTGAATaGCCATGCTGTTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: RDSWLVRLTHLSCEAVDLPQGCE*PCCCGF
Trigger: GAAACCGCAACAGCATGGTCATTCACATCCCTGAGG...CAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp ACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCGTTCGGCTTTGGCAGTaGGACCCAGCATCCACGGAC +
Preference number: 4 (lower is better)
Translates to: TVISGHLGKMPDISVPLFVRLWQ*DPASTD
Trigger: GTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAAC...GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACGTCACAGCTGAGGCTTaGCTGGTTCCTTACAGCCAC +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHVTAEA*LVPYSH
Trigger: GTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGAC...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp GGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCGTTCTCTCTTTGGATaGATGAGTCGGCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GSQVDLAGLESQLRLDWFRSLFG*MSRLSG
Trigger: ACCTGAGAGCCGACTCATTCATCCAAAGAGAGAACG...GAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp CTTCAGCAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGCGAGCCAGGCACCTTaGGCTCCATCCAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: LQQVKTCLNHGDKWPFGQASQAP*APSKPF
Trigger: GAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGC...TTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCAGGCTATGATGTGTaGTGGGAAAGAAAACGGAAT +
Preference number: 4 (lower is better)
Translates to: AQHSRGPLEKAEIPKPCSAGYDV*WERKRN
Trigger: ATTCCGTTTTCTTTCCCATCACACATCATAGCCTGC...CGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAACCCTGTCAATTTTCATaGGGAAAAGGAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREPCQFS*GKGTTA
Trigger: GGCTGTGGTTCCTTTTCCTCATGAAAATTGACAGGG...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACACCTGTACCGGCCTTATaGGAAATACCTGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTPVPAL*EIPGVA
Trigger: TGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGG...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACCCTGTACCGGCCTTATaGGAAATACCTGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHPVPAL*EIPGVA
Trigger: TGCCACGCCAGGTATTTCTCATAAGGCCGGTACAGG...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGAATGACTCAGAGGCACTaGGCCTGGAAACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: GLESQLRLDWFLTATSSRMTQRH*AWKQTQ
Trigger: CTGGGTCTGTTTCCAGGCTCAGTGCCTCTGAGTCAT...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTGCAGTTAGTTCCCCTTaGAGGTTGAGAACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LSGLCQRARHLELHPNRSAVSSP*RLRTVN
Trigger: GTTGACAGTTCTCAACCTTCAAGGGGAACTAACTGC...AGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCGCATCGGTGCCAGGTaGAGCGTGCCCATAACCTAT +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWRIGAR*SVPITY
Trigger: ATAGGTTATGGGCACGCTGCACCTGGCACCGATGCG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTAGGCGGCCGCCCCGATaGACAGCGTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFRRPPR*TASPCR
Trigger: CCTGCATGGGGACGCTGTGCATCGGGGCGGCCGCCT...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATAGGCGGCCGCCCCGATaGACAGCGTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNRRPPR*TASPCR
Trigger: CCTGCATGGGGACGCTGTGCATCGGGGCGGCCGCCT...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAAGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQVSGEG*PLFSIP
Trigger: CGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAAC...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTACAGGAGCACACAGACTaGAGGTCCGGGACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLQEHTD*RSGTSA
Trigger: GGCGGACGTCCCGGACCTGCAGTCTGTGTGCTCCTG...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCAGGAGCACACAGACTaGAGGTCCGGGACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: RSGFLSEAGAILIQPLPLQEHTD*RSGTSA
Trigger: GGCGGACGTCCCGGACCTGCAGTCTGTGTGCTCCTG...CAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAGAAGGAGGAGATCCATaGTTCATGCTCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSEGGDP*FMLRCE
Trigger: CTCACATCTGAGCATGAAGCATGGATCTCCTCCTTC...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTCCCGGGAAAACCACTaGAGAGATGATGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRSRENH*RDDGVG
Trigger: ACCCACCCCATCATCTCTGCAGTGGTTTTCCCGGGA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGAGGCTGAGCGTGATGTaGAGCTTTGGGGTGGGTATC +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRRLSVM*SFGVGI
Trigger: GATACCCACCCCAAAGCTGCACATCACGCTCAGCCT...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACGGTGCCCTGGTGACCTaGAGCGTTCAGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHGALVT*SVQPPS
Trigger: TGAAGGGGGCTGAACGCTGCAGGTCACCAGGGCACC...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647605.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTGTTGGGGCCGCCTaGACGGTCCTAAACGGACTT +
Preference number: 4 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPSVGAA*TVLNGL
Trigger: AAGTCCGTTTAGGACCGTGCAGGCGGCCCCAACAGA...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650269.1
CDS-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAATCTGCAGGGCACCCTTaGTCTGCAGGGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQSAGHP*SAGPRS
Trigger: ACTACGTGGCCCTGCAGACCAAGGGTGCCCTGCAGA...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTTGTACCTGGGCCGGCTaGGCCGCGGCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFCTWAG*AAAPQG
Trigger: TCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACA...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTTCATCAGCCTCTGGTaGTCGGTAAAGCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: AEVHLRRQKSRSRVRLWQFISLW*SVKLCN
Trigger: GTTACACAGCTTTACCGACCACCAGAGGCTGATGAA...CTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCATCGAGCGTTTCTCTaGGCTTCCTGTCTATGTGTA +
Preference number: 4 (lower is better)
Translates to: AFKRLSGLCQRARHLELHHRAFL*ASCLCV
Trigger: TACACATAGACAGGAAGCCCAGAGAAACGCTCGATG...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCAACCTCTGCCACTGCTaGTTAAGAGATGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: GSVRCSVSTSKLESNGETNLCHC*LRDAED
Trigger: ATCCTCAGCATCTCTTAACCAGCAGTGGCAGAGGTT...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATCGTTCTGCCTCTTCATaGCCGCCAGCAAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDRSASS*PPARSR
Trigger: CCGGCTCCTTGCTGGCGGCCATGAAGAGGCAGAACG...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520439.3
ENST00000648164.1
CDS-3UTR CCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTTGGCCTGCTCTGTCTaGCTGGAAAGGTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRLACSV*LERWGK
Trigger: TTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGGCCTGTATTTCCCTTTaGCCTGCTCTGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRACISL*PALSGW
Trigger: CCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGC...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACGCCTGTATTTCCCTTTaGCCTGCTCTGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHACISL*PALSGW
Trigger: CCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGC...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCTGTCTCCGTGGTCTTaGTCTCACATCTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWLSPWS*SHICPG
Trigger: CCCGGGACAGATGTGAGACCAAGACCACGGAGACAG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTCTGTCTCCGTGGTCTTaGTCTCACATCTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPLSPWS*SHICPG
Trigger: CCCGGGACAGATGTGAGACCAAGACCACGGAGACAG...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CGCGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGTGTGCAGCTTTGGGGTaGGTATCCTCTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RDSWLVRLTHLSCEAVDLCAALG*VSSQLC
Trigger: ACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACA...CAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGCGTGATGTGCAGCTTTaGGGTGGGTATCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRRDVQL*GGYPLS
Trigger: GCTGAGAGGATACCCACCCCAAAGCTGCACATCACG...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAGTTGAGAAATACCTGGCGTaGCAGCTTCCAGCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FGSETQHPRTPLLNVQLVEKYLA*QLPALL
Trigger: CAACAGGGCTGGAAGCTGCCACGCCAGGTATTTCTC...AACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACATATGCTCCCATAGTCTaGTGCCATCCCTGTACCGGC +
Preference number: 4 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTYAPIV*CHPCTG
Trigger: GCCGGTACAGGGATGGCACCAGACTATGGGAGCATA...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GTCAAACTGTCCTTTAAGCCTGTTACTGTAAGAGCCTCCACTGTGCCATATTCTCCCCACGCCGCTCTCTaGAGGCGAGAAGAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: VKLSFKPVTVRASTVPYSPHAAL*RREERV
Trigger: CACACGCTCTTCTCGCCTCCAGAGAGCGGCGTGGGG...AGAATATGGCACAGTGGAGGCTCTTACAGTAACAGGCTTAAAGGACAGTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAGTTTGTTGTACTTCCCCTTaGTCCGGATCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: FGSETQHPRTPLLNVQLVCCTSP*SGSPRL
Trigger: AAGCCGAGGAGATCCGGATCAAGGGGAAGTACAACA...AACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR TCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGCCTCAGGGATGTGAATaGCCATGCTGTTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRPQGCE*PCCCGF
Trigger: GAAACCGCAACAGCATGGTCATTCACATCCCTGAGG...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACACTCTCTTTGGATGAATaGGTCGGCTCTCAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTLSLDE*VGSQVD
Trigger: GTCCACCTGAGAGCCGACTCATTCATCCAAAGAGAG...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGCGAGCCAGGCACCTTaGGCTCCATCCAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSASQAP*APSKPF
Trigger: GAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGC...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp TCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTGCGAGGCAGTGGACTTaGACTTCTCAGACGATTTCC +
Preference number: 4 (lower is better)
Translates to: SQVDLAGLESQLRLDWFLARQWT*TSQTIS
Trigger: GGAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGC...AAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp GTCAAACTGTCCTTTAAGCCTGTTACTGTAAGAGCCTCCACTGTGCCATATTCTTGCAGGAGGGCCAGGTaGGAGAGTTGCAGACGGGGA +
Preference number: 4 (lower is better)
Translates to: VKLSFKPVTVRASTVPYSCRRAR*ESCRRG
Trigger: TCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCA...AGAATATGGCACAGTGGAGGCTCTTACAGTAACAGGCTTAAAGGACAGTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAAAAGGTGGGGGAAAATaGGACCAAGAGACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSKGGGK*DQETKK
Trigger: TTTCTTGGTCTCTTGGTCTCATTTTCCCCCACCTTT...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWLRVGD*RLSVMC
Trigger: GCACATCACGCTCAGCCTTCAATCGCCTACCCTTAG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAGCAGGCTATGATGTGTaGTGGGAAAGAAAACGGAAT +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSAGYDV*WERKRN
Trigger: ATTCCGTTTTCTTTCCCATCACACATCATAGCCTGC...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAGCCAAAAGCAGGCTATaGTGTGTGATGGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREAKSRL*CVMGKK
Trigger: TTTCTTTCCCATCACACATCATAGCCTGCTTTTGGC...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGTGCAGAGGCGTGCATTaGGTTACCCTGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKCRGVH*VTLFPL
Trigger: AAGTGGAAACAGGGTAACTCAATGCACGCCTCTGCA...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTACCAACTTCTTCAGAGTaGCATCACAAGTATGCTCCC +
Preference number: 4 (lower is better)
Translates to: GFGSETQHPRTPLLNVQLPTSSE*HHKYAP
Trigger: GGGAGCATACTTGTGATGTCACTCTGAAGAAGTTGG...TAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCACCTGGCATCTGTATaGCTCAGAGGCACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWHLASV*LRGTEP
Trigger: AGGCTCAGTGCCTCTGAGTCATACAGATGCCAGGTG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTTTACACGAGAAGCCTaGGGTTCAGCGAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRFTREA*GSARVS
Trigger: GCTTACCCTCGCTGAACCTCAGGCTTCTCGTGTAAA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTCCATATTCTACAGCCTaGACTACCCCACCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPPYSTA*TTPPPP
Trigger: GGGAGGTGGTGGGGTAGTTCAGGCTGTAGAATATGG...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATTTTTCAGAGGAGTCTTaGATGCTCCAGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AFKRLSGLCQRARHLELHFSEES*MLQCFS
Trigger: GCTGAAACACTGGAGCATTCAAGACTCCTCTGAAAA...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCCGCATCGGTGCCAGGTaGAGCGTGCCCATAACCTAT +
Preference number: 4 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPRIGAR*SVPITY
Trigger: ATAGGTTATGGGCACGCTGCACCTGGCACCGATGCG...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000649473.1
CDS-3UTR GCA 90 bp AAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCTTGCCCGCATCGGTaGCAGGTGCAGCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: KARSGFLSEAGAILIQPLPCPHR*QVQRAH
Trigger: ATGGGCACGCTGCACCTGGCACCGATGCGGGCAAGG...CAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATACATGCAGAAGGCCTTaGCCGCATCGGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDTCRRP*PHRCQV
Trigger: CACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGT...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTACATGCAGAAGGCCTTaGCCGCATCGGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SGLELLRRFPQLSSDRPSTCRRP*PHRCQV
Trigger: CACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGT...AGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCAACATGCAGAAGGCCTTaGCCGCATCGGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ARSGFLSEAGAILIQPLPTCRRP*PHRCQV
Trigger: CACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGT...TGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAGAAGGAGTTCTGCGGTaGCACCGAGCGGCCGCCATA +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLEGVLR*HRAAAI
Trigger: TATGGCGGCCGCTCGGTGGCACCGCAGAACTCCTTC...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGCGCTGAAGGAGTTCTaGGGTGCCACCGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFALKEF*GATERP
Trigger: CGGCCGCTCGGTGGCACCGCAGAACTCCTTCAGCGC...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATAGAGTCCGCACGTTCTaGCTCTTCATGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDRVRTF*LFMAAS
Trigger: GCTGGCGGCCATGAAGAGGCAGAACGTGCGGACTCT...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520439.3
ENST00000648164.1
CDS-3UTR GCA 90 bp AAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATTCCCGGGAAAACCACTaGAGAGATGATGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KTCLNHGDKWPFGQDARHSRENH*RDDGVG
Trigger: ACCCACCCCATCATCTCTGCAGTGGTTTTCCCGGGA...ATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGAGGCTGAGCGTGATGTaGAGCTTTGGGGTGGGTATC +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWRLSVM*SFGVGI
Trigger: GATACCCACCCCAAAGCTGCACATCACGCTCAGCCT...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTATGGGGCACTGCCCAGTaGTTGCTGCTCCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVWGTAQ*LLLLWP
Trigger: CGGCCACAGGAGCAGCAAGCACTGGGCAGTGCCCCA...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTTGCCAGACATCTCAGTaGCTTTATTCTCGCGATGGT +
Preference number: 4 (lower is better)
Translates to: GKPHGTQALSLFMNAILGCQTSQ*LYSRDG
Trigger: ACCATCGCGAGAATAAAGGCACTGAGATGTCTGGCA...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCAGCAAGTTAAGACGTaGCTCAATCACGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: LSGLCQRARHLELHPNRSQQVKT*LNHGDK
Trigger: CTTATCACCGTGATTGAGGCACGTCTTAACTTGCTG...AGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTCAGCAAGTTAAGACGTaGCTCAATCACGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: HSPSTAEVHLRRQKSRSRQQVKT*LNHGDK
Trigger: CTTATCACCGTGATTGAGGCACGTCTTAACTTGCTG...ACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCTCCACCAGAAGTGTTaGCACAAGAAAACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LRRFPQLSSDRPSSSVARLHQKC*HKKTVW
Trigger: CCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG...CCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CTCCACCAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACGCCCATTGGCCCAAATaGTTGGGACTGGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: LHQKCCHKKTVWTQFPDDAHWPK*LGLVAF
Trigger: GAATGCCACCAGTCCCAAGCATTTGGGCCAATGGGC...GTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CGCGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGCTGTCTATGTGTAGCTaGACCATCCCCACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: RDSWLVRLTHLSCEAVDLLSMCS*TIPTVV
Trigger: CACAACTGTGGGGATGGTCCAGCTACACATAGACAG...CAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGAACCTCTGCCACTGCTaGTTAAGAGATGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LRRFPQLSSDRPSSSVARNLCHC*LRDAED
Trigger: ATCCTCAGCATCTCTTAACCAGCAGTGGCAGAGGTT...CCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTTAAACCGTTCTCTCTTTaGATGAATGAGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GLCQRARHLELHPNRSLFKPFSL*MNESAL
Trigger: GAGAGCCGACTCATTCATCCAAAGAGAGAACGGTTT...AAAGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp CATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTTATGAACGCGATTCTTaGTTGGTGAGGCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: HSPSTAEVHLRRQKSRSRYERDS*LVRLTH
Trigger: ATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATA...ACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCGTGATGTGCAGCTTTaGGGTGGGTATCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWRDVQL*GGYPLS
Trigger: GCTGAGAGGATACCCACCCCAAAGCTGCACATCACG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTCGTGATGTGCAGCTTTaGGGTGGGTATCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPRDVQL*GGYPLS
Trigger: GCTGAGAGGATACCCACCCCAAAGCTGCACATCACG...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCAAGCTAAGATGGTTTaGGTCGTCTTGCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: KTCLNHGDKWPFGQDARHQAKMV*VVLPTR
Trigger: GCGGGTGGGCAAGACGACCCAAACCATCTTAGCTTG...ATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAAATCACGGTGATAAGTaGCCATTTGGGCAAGATGCC +
Preference number: 4 (lower is better)
Translates to: GFGSETQHPRTPLLNVQLNHGDK*PFGQDA
Trigger: GGCATCTTGCCCAAATGGCCACTTATCACCGTGATT...TAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCTCATAGATCTGGATTaGTTTCCAGGGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TAEVHLRRQKSRSRVRLWLIDLD*FPGMVQ
Trigger: CTGCACCATCCCTGGAAACCAATCCAGATCTATGAG...CCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCTTTAAGACTTATGAGAAATACCTaGCGTGGCAGCTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: FPQLSSDRPSSSVARPLRLMRNT*RGSFQP
Trigger: GGGCTGGAAGCTGCCACGCCAGGTATTTCTCATAAG...TCTTAAAGGCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTCTTATGAGAAATACCTaGCGTGGCAGCTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SQVDLAGLESQLRLDWFLLMRNT*RGSFQP
Trigger: GGGCTGGAAGCTGCCACGCCAGGTATTTCTCATAAG...AAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCTTTTATGATGATGAATaGGTGGAAGGGCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PLEKAEIPKPCSALAVRPFYDDE*VEGLGS
Trigger: ACTGCCAAGCCCTTCCACTCATTCATCATCATAAAA...GGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCGTTCTCTCTTTGGATaGATGAGTCGGCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QLSSDRPSSSVARPLRGCRSLFG*MSRLSG
Trigger: ACCTGAGAGCCGACTCATTCATCCAAAGAGAGAACG...ACAACCTCTTAAAGGCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp AGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGGCGAGCCAGGCACCTTaGGCTCCATCCAAACCGTTC +
Preference number: 4 (lower is better)
Translates to: RSGFLSEAGAILIQPLPLASQAP*APSKPF
Trigger: GAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGC...CAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp CGCGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGGACGATTTCCCCAACTaGGTAGTGACAGACCTTCTA +
Preference number: 4 (lower is better)
Translates to: RDSWLVRLTHLSCEAVDLDDFPN*VVTDLL
Trigger: TAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTC...CAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGTTTTCCCGTTTCCCCTaGCAATTCCAGTTGCATGGT +
Preference number: 4 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKFSRFP*QFQLHG
Trigger: ACCATGCAACTGGAATTGTCAGGGGAAACGGGAAAA...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCCCCTGTCAATTTTCATaGGGAAAAGGAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: LAGLESQLRLDWFLTATSPCQFS*GKGTTA
Trigger: GGCTGTGGTTCCTTTTCCTCATGAAAATTGACAGGG...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGCCCTGTCAATTTTCATaGGGAAAAGGAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKPCQFS*GKGTTA
Trigger: GGCTGTGGTTCCTTTTCCTCATGAAAATTGACAGGG...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp ACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCCACCTGGCATCTGTATaGCTCAGAGGCACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: TVISGHLGKMPDISVPLFHLASV*LRGTEP
Trigger: AGGCTCAGTGCCTCTGAGTCATACAGATGCCAGGTG...GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTCCTTGCCCGCATCGGTaGCAGGTGCAGCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFPCPHR*QVQRAH
Trigger: ATGGGCACGCTGCACCTGGCACCGATGCGGGCAAGG...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACGCACGGCGTAGAACATaGAGAAGGCCTTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHARRRT*RRPCPH
Trigger: ATGCGGGCAAGGCCTTCTGCATGTTCTACGCCGTGC...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCAGCACGGCGTAGAACATaGAGAAGGCCTTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: ARSGFLSEAGAILIQPLPARRRT*RRPCPH
Trigger: ATGCGGGCAAGGCCTTCTGCATGTTCTACGCCGTGC...TGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGAGCCCGACGGGCTTaGGGGGACCCTCACATCGAG +
Preference number: 4 (lower is better)
Translates to: NHQCYDDQFSSHRSGLVSRARRA*GDPHIE
Trigger: CTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT...GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGAAGGTTGTCTGGGCTATaGCAGCGAGCCAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRRLSGL*QRARHL
Trigger: AAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCT...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTATTTCCCTTTGGCCTaGTCTGTCTGGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRYFPLA*SVWLER
Trigger: CCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGACTGCCCAGTGCTTGCTaGTCCTGTGGCCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: THREMLIIIPQKRPVYTRLPSAC*SCGRGH
Trigger: ATGGCCCCGGCCACAGGAGCAGCAAGCACTGGGCAG...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGAGATGGTGCAGAGGCGTaGATTGAGTTACCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GLESQLRLDWFLTATSSRDGAEA*IELPCF
Trigger: GAAACAGGGTAACTCAATGCACGCCTCTGCACCATC...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCCCGTTGAATCACCAGTaGTATGATGACCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PLEKAEIPKPCSALAVRPPLNHQ*YDDQFS
Trigger: AGAAAACTGGTCATCATAGCACTGGTGATTCAACGG...GGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGGGCGAGAAGAGCGTGTaGTTGCCTCTCTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSGFLSEAGAILIQPLPLGEKSV*LPLSRP
Trigger: GGGCCTTGAGAGAGGCAAGCACACGCTCTTCTCGCC...CAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACACGTTTCATCAGCCTCTaGTGGTCGGTAAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTRFISL*WSVKLC
Trigger: ACACAGCTTTACCGACCACCAGAGGCTGATGAAACG...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp TTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAGTTCGTTTCATCAGCCTCTaGTGGTCGGTAAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: FGSETQHPRTPLLNVQLVRFISL*WSVKLC
Trigger: ACACAGCTTTACCGACCACCAGAGGCTGATGAAACG...AACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACCGGCCTTATGAGATGAGTGGAAGGGCTTaGCAGTCTCTACTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: TSQVCSHSLVPSLYRPYEMSGRA*QSLLLV
Trigger: AACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCAT...CTCATAAGGCCGGTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAGGATGAGGCTGCCTCACTTACAGAAGGAGAGAGCTGTCCCCGTCCTCTGTTGAAAAGCGAGATCTaGATTTTTATCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKDEAASLTEGESCPRPLLKSEI*IFIRSW
Trigger: CCAGCTTCGGATAAAAATCCAGATCTCGCTTTTCAA...CAGAGGACGGGGACAGCTCTCTCCTTCTGTAAGTGAGGCAGCCTCATCCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAAAACCGTTCTCTCTTTaGATGAATGAGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GFGSETQHPRTPLLNVQLKPFSL*MNESAL
Trigger: GAGAGCCGACTCATTCATCCAAAGAGAGAACGGTTT...TAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCAAACCGTTCTCTCTTTaGATGAATGAGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GSQVDLAGLESQLRLDWFKPFSL*MNESAL
Trigger: GAGAGCCGACTCATTCATCCAAAGAGAGAACGGTTT...GAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACCTGTCTCCGTGGTCTTaGTCTCACATCTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHLSPWS*SHICPG
Trigger: CCCGGGACAGATGTGAGACCAAGACCACGGAGACAG...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGGATGGTCCTTCCGTCTaGGGCACTGCCCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RSGFLSEAGAILIQPLPLDGPSV*GTAQCL
Trigger: CAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATC...CAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGGTGTCCAGCCCTGTTGTATaGGGCACACTCCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: AMMTSFLLIDLDWFPGMVSSPVV*GTLHPA
Trigger: GGCAGGGTGGAGTGTGCCCCATACAACAGGGCTGGA...CACCATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CTTCAGCAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAATATGCTCCCATAGTCTaGTGCCATCCCTGTACCGGC +
Preference number: 4 (lower is better)
Translates to: LQQVKTCLNHGDKWPFGQYAPIV*CHPCTG
Trigger: GCCGGTACAGGGATGGCACCAGACTATGGGAGCATA...TTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTGCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAGTTTGTGTCCTCATATaGAAAACACAAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREVCVLI*KTQAAR
Trigger: TCTGGCAGCTTGTGTTTTCCATATGAGGACACAAAC...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647605.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGAAGGCCCTGTGTCCTaGACGAAGGGGAAATTTCAA +
Preference number: 4 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTEGPVS*TKGKFQ
Trigger: TTGAAATTTCCCCTTCGTCCAGGACACAGGGCCTTC...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACGCCCCCTCTCGGTGGTaGGGAGGAAAAGTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHAPSRW*GGKVCE
Trigger: TTCGCAAACTTTTCCTCCCCACCACCGAGAGGGGGC...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000648164.1
3UTR CAA 72 bp GCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTaGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AGSESVYERDSW*VRLTHLSCEAV
Trigger: CACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAATGTTGTACTTCCCCTTaGTCCGGATCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQCCTSP*SGSPRL
Trigger: AAGCCGAGGAGATCCGGATCAAGGGGAAGTACAACA...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR TCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGGGCAAGCTTGGCGCTaGAGGAGTTCTGCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFGQAWR*RSSAVP
Trigger: TGGCACCGCAGAACTCCTTCAGCGCCAAGCTTGCCC...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTGCTCTAGACACATTTTaGAAAGCGAGATCTGGATTT +
Preference number: 4 (lower is better)
Translates to: LSGLCQRARHLELHPNRSALDTF*KARSGF
Trigger: AAATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGC...AGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTCACAGCTGAGGCTTaGCTGGTTCCTTACAGCCAC +
Preference number: 4 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSVTAEA*LVPYSH
Trigger: GTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGAC...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp CAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGCCCGTTCTCTCTTTGGATaGATGAGTCGGCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QVKTCLNHGDKWPFGQDARSLFG*MSRLSG
Trigger: ACCTGAGAGCCGACTCATTCATCCAAAGAGAGAACG...GGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGAGACGATTTCCCCAACTaGGTAGTGACAGACCTTCTA +
Preference number: 4 (lower is better)
Translates to: GLESQLRLDWFLTATSSRDDFPN*VVTDLL
Trigger: TAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTC...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACCTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHLRVGD*RLSVMC
Trigger: GCACATCACGCTCAGCCTTCAATCGCCTACCCTTAG...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGGCCAAAAGCAGGCTATaGTGTGTGATGGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKAKSRL*CVMGKK
Trigger: TTTCTTTCCCATCACACATCATAGCCTGCTTTTGGC...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CGCGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGGCCAAAAGCAGGCTATaGTGTGTGATGGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: RDSWLVRLTHLSCEAVDLAKSRL*CVMGKK
Trigger: TTTCTTTCCCATCACACATCATAGCCTGCTTTTGGC...CAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTTTTCCCGTTTCCCCTaGCAATTCCAGTTGCATGGT +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRFSRFP*QFQLHG
Trigger: ACCATGCAACTGGAATTGTCAGGGGAAACGGGAAAA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCATGCGTGGACAAATCTTaGTCAAAACGAAAGGTTACT +
Preference number: 4 (lower is better)
Translates to: EGRNPEAVFGFGSETQHPCVDKS*SKRKVT
Trigger: AGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCA...TGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGCCTGCACGGTCCTGTaGATGGCAGAGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFACTVL*MAEAGP
Trigger: AGGACCAGCCTCTGCCATTCACAGGACCGTGCAGGC...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTCGGTGCGGTTCCGACTaGAGGATCACCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFRCGSD*RITSSS
Trigger: GCTGGAGCTGGTGATCCTGCAGTCGGAACCGCACCG...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR GCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAGCACGGCGTAGAACATaGAGAAGGCCTTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLARRRT*RRPCPH
Trigger: ATGCGGGCAAGGCCTTCTGCATGTTCTACGCCGTGC...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGGTGGCACGGCGTAGAACATaGAGAAGGCCTTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: AMMTSFLLIDLDWFPGMVARRRT*RRPCPH
Trigger: ATGCGGGCAAGGCCTTCTGCATGTTCTACGCCGTGC...CACCATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGTATTTCCCTTTGGCCTaGTCTGTCTGGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWYFPLA*SVWLER
Trigger: CCTTTCCAGCCAGACAGAGCAGGCCAAAGGGAAATA...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGGAAGGAGGAGATCCATaGTTCATGCTCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRREGGDP*FMLRCE
Trigger: CTCACATCTGAGCATGAAGCATGGATCTCCTCCTTC...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTGAAGGAGGAGATCCATaGTTCATGCTCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: SQVDLAGLESQLRLDWFLEGGDP*FMLRCE
Trigger: CTCACATCTGAGCATGAAGCATGGATCTCCTCCTTC...AAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATTCCCGGGAAAACCACTaGAGAGATGATGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDSRENH*RDDGVG
Trigger: ACCCACCCCATCATCTCTGCAGTGGTTTTCCCGGGA...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCTTTAAGATGCCAGACATCTCAGTaGCTTTATTCTCGCGATGGT +
Preference number: 4 (lower is better)
Translates to: FPQLSSDRPSSSVARPLRCQTSQ*LYSRDG
Trigger: ACCATCGCGAGAATAAAGGCACTGAGATGTCTGGCA...TCTTAAAGGCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGAAGCCATTTGGGCAAGATaGCAGACATCTCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RFLVGEADSFELRGSGLEAIWAR*QTSQCL
Trigger: AAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGC...TTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCGTTGAATCACCAGTaGTATGATGACCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LRRFPQLSSDRPSSSVARPLNHQ*YDDQFS
Trigger: AGAAAACTGGTCATCATAGCACTGGTGATTCAACGG...CCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGGTGACATCACAAGTATaGTCCCATAGTCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRVTSQV*SHSLVP
Trigger: TGGCACCAGACTATGGGAGCATACTTGTGATGTCAC...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACCTCCACCAGAAGTGTTaGCACAAGAAAACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHLHQKC*HKKTVW
Trigger: CCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGAAGAAGAGCGTGTGCTTaGCTCTCTCAAGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRRRACA*LSQGPR
Trigger: TCTGGGGCCTTGAGAGAGGCAAGCACACGCTCTTCT...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCGCCCATTGGCCCAAATaGTTGGGACTGGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIAHWPK*LGLVAF
Trigger: GAATGCCACCAGTCCCAAGCATTTGGGCCAATGGGC...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTTCATCAGCCTCTGGTaGTCGGTAAAGCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRFISLW*SVKLCN
Trigger: GTTACACAGCTTTACCGACCACCAGAGGCTGATGAA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGATTCATCAGCCTCTGGTaGTCGGTAAAGCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GLESQLRLDWFLTATSSRFISLW*SVKLCN
Trigger: GTTACACAGCTTTACCGACCACCAGAGGCTGATGAA...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCGTTTCATCAGCCTCTaGTGGTCGGTAAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWRFISL*WSVKLC
Trigger: ACACAGCTTTACCGACCACCAGAGGCTGATGAAACG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTCTGTCTATGTGTAGCTaGACCATCCCCACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPLSMCS*TIPTVV
Trigger: CACAACTGTGGGGATGGTCCAGCTACACATAGACAG...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGATGATGATGAATGAGTaGAAGGGCTTGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKMMMNE*KGLAVS
Trigger: AGAGACTGCCAAGCCCTTCCACTCATTCATCATCAT...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAGTTAACCTCTGCCACTGCTaGTTAAGAGATGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: FGSETQHPRTPLLNVQLVNLCHC*LRDAED
Trigger: ATCCTCAGCATCTCTTAACCAGCAGTGGCAGAGGTT...AACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGTTGAAAAGCGAGATCTaGATTTTTATCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RELQTGKPHGTQALSLFMLKSEI*IFIRSW
Trigger: CCAGCTTCGGATAAAAATCCAGATCTCGCTTTTCAA...CATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGACAGCTGAGGCTTGACTaGTTCCTTACAGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRQLRLD*FLTATS
Trigger: GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTG...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAGACGAGTTGGACCAATaGAAATTAACACCAACTATG +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSDELDQ*KLTPTM
Trigger: CATAGTTGGTGTTAATTTCCATTGGTCCAACTCGTC...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGGTCTGGCTGGAAAGGTaGGGGAAAATGAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWVWLER*GKMRPR
Trigger: TCTTGGTCTCATTTTCCCCCACCTTTCCAGCCAGAC...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGATTGGCCTGCTCTGTCTaGCTGGAAAGGTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRLACSV*LERWGK
Trigger: TTTCCCCCACCTTTCCAGCCAGACAGAGCAGGCCAA...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAATGTGCAGCTTTGGGGTaGGTATCCTCTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQCAALG*VSSQLC
Trigger: ACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACA...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACCAAGCTAAGATGGTTTaGGTCGTCTTGCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHQAKMV*VVLPTR
Trigger: GCGGGTGGGCAAGACGACCCAAACCATCTTAGCTTG...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATACTGGCAAGCTAAGATaGTTTGGGTCGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: KTCLNHGDKWPFGQDARHTGKLR*FGSSCP
Trigger: TGGGCAAGACGACCCAAACCATCTTAGCTTGCCAGT...ATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCAGAAGGTTTGCTCCCTaGTGCGGTCGCTCACAACCA +
Preference number: 4 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIRRFAP*CGRSQP
Trigger: TGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCT...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAGTTCTCATAGATCTGGATTaGTTTCCAGGGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FGSETQHPRTPLLNVQLVLIDLD*FPGMVQ
Trigger: CTGCACCATCCCTGGAAACCAATCCAGATCTATGAG...AACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATGTGCGTGCGCGCCGTTaGGAGCCCGAATGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNVRARR*EPECVC
Trigger: ACACACACATTCGGGCTCCCAACGGCGCGCACGCAC...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648164.1
3UTR CAA 72 bp CAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTaGATCAAAACGAAAGGTTACTTAGCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QRRRGRSLRGQI*IKTKGYLATAG
Trigger: CCCTGCTGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACTGTTGTACTTCCCCTTaGTCCGGATCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHCCTSP*SGSPRL
Trigger: AAGCCGAGGAGATCCGGATCAAGGGGAAGTACAACA...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR TCA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGAAGTTGTGTAGGGGAATaGGTAGAGCATTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRSCVGE*VEHSPS
Trigger: GCTGGGCGAATGCTCTACTCATTCCCCTACACAACT...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CTCCACCAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACGACGATTTCCCCAACTaGGTAGTGACAGACCTTCTA +
Preference number: 4 (lower is better)
Translates to: LHQKCCHKKTVWTQFPDDDDFPN*VVTDLL
Trigger: TAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTC...GTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTACTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLLRVGD*RLSVMC
Trigger: GCACATCACGCTCAGCCTTCAATCGCCTACCCTTAG...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GTTCCTTCTGAGTATAGCCAAGGTCCATTTCCATGCAAGAGCCATGAACTTCATCTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: VPSEYSQGPFPCKSHELHLRVGD*RLSVMC
Trigger: GCACATCACGCTCAGCCTTCAATCGCCTACCCTTAG...ATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTGGCTATACTCAGAAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GAGGCGTGCATTGAGTTACCCTGTTTCCACTTCAGCAAGTTAAGACGTGCCTCACCAACTTCTTCAGAGTaGCATCACAAGTATGCTCCC +
Preference number: 4 (lower is better)
Translates to: EACIELPCFHFSKLRRASPTSSE*HHKYAP
Trigger: GGGAGCATACTTGTGATGTCACTCTGAAGAAGTTGG...TGAGGCACGTCTTAACTTGCTGAAGTGGAAACAGGGTAACTCAATGCACGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCACCTGGCATCTGTATaGCTCAGAGGCACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: RSGFLSEAGAILIQPLPLHLASV*LRGTEP
Trigger: AGGCTCAGTGCCTCTGAGTCATACAGATGCCAGGTG...CAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGAAGTGTGAGATGCTCTGTCTCCACCTCAAAGCTGGAGAGCAACGGGGAGACCTTCCTGAGACCAATGTaGACTTTACCCTATTTACAA +
Preference number: 4 (lower is better)
Translates to: GSVRCSVSTSKLESNGETFLRPM*TLPYLQ
Trigger: TTGTAAATAGGGTAAAGTTCACATTGGTCTCAGGAA...GGTCTCCCCGTTGCTCTCCAGCTTTGAGGTGGAGACAGAGCATCTCACACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGCCTCTAAACTCTTCCTaGGACCAATGTGAACTTTAC +
Preference number: 4 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKPLNSS*DQCELY
Trigger: GTAAAGTTCACATTGGTCTCAGGAAGAGTTTAGAGG...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACACCATATTCTACAGCCTaGACTACCCCACCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GRSLRGQILIKTKGYLATPYSTA*TTPPPP
Trigger: GGGAGGTGGTGGGGTAGTTCAGGCTGTAGAATATGG...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTTAAAGTCCCCTCAGTaGATCTGGAGGTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRLKSPQ*IWRSNC
Trigger: ACAGTTTGACCTCCAGATTCACTGAGGGGACTTTAA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAATCTCGTTGGGGCCTTaGGACAGGCCAGTAAACCGT +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLISLGP*DRPVNR
Trigger: ACGGTTTACTGGCCTGTCTCAAGGCCCCAACGAGAT...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATACATGCAGAAGGCCTTaGCCGCATCGGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNTCRRP*PHRCQV
Trigger: CACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGT...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGGCACGGCGTAGAACATaGAGAAGGCCTTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: SAMMTSFLLIDLDWFPGMARRRT*RRPCPH
Trigger: ATGCGGGCAAGGCCTTCTGCATGTTCTACGCCGTGC...CATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TGCAAGAGCCATGAACTTCATTTACAAAAGAGGAATGGGAGGATGGATGAATGGGCACGGCGTAGAACATaGAGAAGGCCTTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: CKSHELHLQKRNGRMDEWARRRT*RRPCPH
Trigger: ATGCGGGCAAGGCCTTCTGCATGTTCTACGCCGTGC...CCATTCATCCATCCTCCCATTCCTCTTTTGTAAATGAAGTTCATGGCTCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNVSGEG*PLFSIP
Trigger: CGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAAC...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATGAAGGAGTTCTGCGGTaGCACCGAGCGGCCGCCATA +
Preference number: 4 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDEGVLR*HRAAAI
Trigger: TATGGCGGCCGCTCGGTGGCACCGCAGAACTCCTTC...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTTCAACCTCTGCCACTaGTGGTTAAGAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPFNLCH*WLRDAE
Trigger: CTCAGCATCTCTTAACCAGCAGTGGCAGAGGTTGAA...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGAATTCAACCTCTGCCACTaGTGGTTAAGAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: RFLVGEADSFELRGSGLEFNLCH*WLRDAE
Trigger: CTCAGCATCTCTTAACCAGCAGTGGCAGAGGTTGAA...TTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTAGAGTCCGCACGTTCTaGCTCTTCATGGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFRVRTF*LFMAAS
Trigger: GCTGGCGGCCATGAAGAGGCAGAACGTGCGGACTCT...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520439.3
ENST00000648164.1
CDS-3UTR GCA 90 bp TTCTTCAGAGTGACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACGCCATTTGGGCAAGATaGCAGACATCTCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: FFRVTSQVCSHSLVPSLYAIWAR*QTSQCL
Trigger: AAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGC...GTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGCAGCAAGTTAAGACGTaGCTCAATCACGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRQQVKT*LNHGDK
Trigger: CTTATCACCGTGATTGAGGCACGTCTTAACTTGCTG...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGGCTCCCATAGTCTGGTaGCATCCCTGTACCGGCCTT +
Preference number: 4 (lower is better)
Translates to: SAMMTSFLLIDLDWFPGMAPIVW*HPCTGL
Trigger: AAGGCCGGTACAGGGATGGCACCAGACTATGGGAGC...CATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTCGCATCGGTGCCAGGTaGAGCGTGCCCATAACTGCT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFRIGAR*SVPITA
Trigger: AGCAGTTATGGGCACGCTGCACCTGGCACCGATGCG...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647605.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GCCTGGCATGTAGCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTCGCATCGGTGCCAGGTaGAGCGTGCCCATAACTGCT +
Preference number: 4 (lower is better)
Translates to: AWHVAAFITSITYIISVGRIGAR*SVPITA
Trigger: AGCAGTTATGGGCACGCTGCACCTGGCACCGATGCG...ACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGCTACATGCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTTCTGCAGGGCACCCTTaGTCTGCAGGGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFSAGHP*SAGPRS
Trigger: ACTACGTGGCCCTGCAGACCAAGGGTGCCCTGCAGA...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACTATGAACGCGATTCTTaGTTGGTGAGGCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: LESQLRLDWFLTATSSRHYERDS*LVRLTH
Trigger: ATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATA...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCGTCTGGCTGGAAAGGTaGGGGAAAATGAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPVWLER*GKMRPR
Trigger: TCTTGGTCTCATTTTCCCCCACCTTTCCAGCCAGAC...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACTGTGCAGCTTTGGGGTaGGTATCCTCTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHCAALG*VSSQLC
Trigger: ACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACA...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACACAAGCTAAGATGGTTTaGGTCGTCTTGCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: GRSLRGQILIKTKGYLATQAKMV*VVLPTR
Trigger: GCGGGTGGGCAAGACGACCCAAACCATCTTAGCTTG...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGAGATGGTCCTTCCGTCTaGGGCACTGCCCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: THREMLIIIPQKRPVYTRDGPSV*GTAQCL
Trigger: CAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATC...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGGTGGCAAAGCCTCCTTTCTaGGAGATCTCGTTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AMMTSFLLIDLDWFPGMVAKPPF*EISLGP
Trigger: AGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGC...CACCATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGGGGAAATTTCAACATaGGATGTAGCATTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: HSPSTAEVHLRRQKSRSRGEIST*DVALKY
Trigger: GTACTTTAATGCTACATCCCATGTTGAAATTTCCCC...ACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGGGATCCAGGGAAGGATaGGGCTGCCTCACTTACAGA +
Preference number: 4 (lower is better)
Translates to: KARSGFLSEAGAILIQPLGSREG*GCLTYR
Trigger: TCTGTAAGTGAGGCAGCCTCATCCTTCCCTGGATCC...CAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGGCAGGCTATGATGTGTaGTGGGAAAGAAAACGGAAT +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWAGYDV*WERKRN
Trigger: ATTCCGTTTTCTTTCCCATCACACATCATAGCCTGC...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTCTTCAGAGTGACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACTTTTCCCGTTTCCCCTaGCAATTCCAGTTGCATGGT +
Preference number: 4 (lower is better)
Translates to: FFRVTSQVCSHSLVPSLYFSRFP*QFQLHG
Trigger: ACCATGCAACTGGAATTGTCAGGGGAAACGGGAAAA...GTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATCACCAAAAGGAAGTGTaGGATGCTCTGTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDHQKEV*DALSPP
Trigger: AGGTGGAGACAGAGCATCTCACACTTCCTTTTGGTG...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGATGCAGAGGCGTGCATTaGGTTACCCTGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRCRGVH*VTLFPL
Trigger: AAGTGGAAACAGGGTAACTCAATGCACGCCTCTGCA...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TGCAAGAGCCATGAACTTCATTTACAAAAGAGGAATGGGAGGATGGATGAATGGCCAGGCAGGTGCCGTTaGATCACCAGTGCTATGATG +
Preference number: 4 (lower is better)
Translates to: CKSHELHLQKRNGRMDEWPGRCR*ITSAMM
Trigger: CATCATAGCACTGGTGATTCAACGGCACCTGCCTGG...CCATTCATCCATCCTCCCATTCCTCTTTTGTAAATGAAGTTCATGGCTCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGATTCAACCTCTGCCACTaGTGGTTAAGAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRFNLCH*WLRDAE
Trigger: CTCAGCATCTCTTAACCAGCAGTGGCAGAGGTTGAA...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CTTCAGCAAGTTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGAAGGAGGAGATCCATaGTTCATGCTCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: LQQVKTCLNHGDKWPFGQEGGDP*FMLRCE
Trigger: CTCACATCTGAGCATGAAGCATGGATCTCCTCCTTC...TTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAACTTGCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGTCCCGGGAAAACCACTaGAGAGATGATGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KARSGFLSEAGAILIQPLSRENH*RDDGVG
Trigger: ACCCACCCCATCATCTCTGCAGTGGTTTTCCCGGGA...CAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTTTTATGCAGGGTAGGTaGTGCACAAAATCATCAATA +
Preference number: 4 (lower is better)
Translates to: GKPHGTQALSLFMNAILGFMQGR*CTKSSI
Trigger: TATTGATGATTTTGTGCAGCACCTACCCTGCATAAA...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGACCACAGCAGGGACACTaGGTCACGATAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: THREMLIIIPQKRPVYTRPQQGH*VTIAAL
Trigger: CAGTGCTGCTATCGTGACGCAGTGTCCCTGCTGTGG...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTAAAGGAAGTGTGAGATaGTCTGTCTCCACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPKGSVR*SVSTSK
Trigger: CTTTGAGGTGGAGACAGAGCATCTCACACTTCCTTT...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATGATGGTGCAGAGGCGTaGATTGAGTTACCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDDGAEA*IELPCF
Trigger: GAAACAGGGTAACTCAATGCACGCCTCTGCACCATC...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCCAGAGGAGTCTTGAATaGTCCAGTGTTTCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: TVISGHLGKMPDISVPLFQRSLE*SSVSAH
Trigger: ATGGGCTGAAACACTGGAGCATTCAAGACTCCTCTG...GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAATTCATCAGCCTCTGGTaGTCGGTAAAGCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQFISLW*SVKLCN
Trigger: GTTACACAGCTTTACCGACCACCAGAGGCTGATGAA...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATCGTTTCATCAGCCTCTaGTGGTCGGTAAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDRFISL*WSVKLC
Trigger: ACACAGCTTTACCGACCACCAGAGGCTGATGAAACG...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGACGTTTCATCAGCCTCTaGTGGTCGGTAAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRRFISL*WSVKLC
Trigger: ACACAGCTTTACCGACCACCAGAGGCTGATGAAACG...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGACATCGAGCGTTTCTCTaGGCTTCCTGTCTATGTGTA +
Preference number: 4 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRHRAFL*ASCLCV
Trigger: TACACATAGACAGGAAGCCCAGAGAAACGCTCGATG...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGGCCTGTATTTCCCTTTaGCCTGCTCTGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KARSGFLSEAGAILIQPLACISL*PALSGW
Trigger: CCAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGC...CAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATTCAGCTCTGTCTCCGTaGTCTTGGTCTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDSALSP*SWSHIC
Trigger: ACAGATGTGAGACCAAGACCACGGAGACAGAGCTGA...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAAAATCAAAAACCTTGTaGGTTTTGTCTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSKSKTL*VLSSRF
Trigger: AAAACGGGAAGACAAAACCCACAAGGTTTTTGATTT...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCAAATCAAAAACCTTGTaGGTTTTGTCTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LEKAEIPKPCSALAVRPSKSKTL*VLSSRF
Trigger: AAAACGGGAAGACAAAACCCACAAGGTTTTTGATTT...GCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTTAAATCAAAAACCTTGTaGGTTTTGTCTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GLCQRARHLELHPNRSLFKSKTL*VLSSRF
Trigger: AAAACGGGAAGACAAAACCCACAAGGTTTTTGATTT...AAAGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGGAGAACTGTCAACTTTaGCCTAGAGAATCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRENCQL*PRESEV
Trigger: AACCTCAGATTCTCTAGGCCAAAGTTGACAGTTCTC...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAGAAAAGTTTGCGAAGTaGCGGTGTCTCTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLEKFAK*RCLWSP
Trigger: GGGACTCCAGAGACACCGCCACTTCGCAAACTTTTC...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR TCA 90 bp AGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGTGTTGTACTTCCCCTTaGTCCGGATCTCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: SAMMTSFLLIDLDWFPGMCCTSP*SGSPRL
Trigger: AAGCCGAGGAGATCCGGATCAAGGGGAAGTACAACA...CATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000649473.1
CDS-3UTR TCA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCGGATCCAGGGAAGGATaGGGCTGCCTCACTTACAGA +
Preference number: 4 (lower is better)
Translates to: NHQCYDDQFSSHRSGLVSGSREG*GCLTYR
Trigger: TCTGTAAGTGAGGCAGCCTCATCCTTCCCTGGATCC...GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AAAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTCTAAGGGTAGGCGATTaGAGGCTGAGCGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: KSEIWIFIRSWCHSNSTSLRVGD*RLSVMC
Trigger: GCACATCACGCTCAGCCTTCAATCGCCTACCCTTAG...AGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TTCTTCAGAGTGACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACGCAGGCTATGATGTGTaGTGGGAAAGAAAACGGAAT +
Preference number: 4 (lower is better)
Translates to: FFRVTSQVCSHSLVPSLYAGYDV*WERKRN
Trigger: ATTCCGTTTTCTTTCCCATCACACATCATAGCCTGC...GTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATTTTTCCCGTTTCCCCTaGCAATTCCAGTTGCATGGT +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDFSRFP*QFQLHG
Trigger: ACCATGCAACTGGAATTGTCAGGGGAAACGGGAAAA...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CTCTTTCTAGGGAGCAAAGCCTCCTTTCTGGGAGATCTCGTTGGGGCCTTGAGATTCCTGAGACCAATGTaGACTTTACCCTATTTACAA +
Preference number: 4 (lower is better)
Translates to: LFLGSKASFLGDLVGALRFLRPM*TLPYLQ
Trigger: TTGTAAATAGGGTAAAGTTCACATTGGTCTCAGGAA...TCTCAAGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGCTCCCTAGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACATTTATCCGAAGCTGGTaGCATTCTAATTCAACCTCT +
Preference number: 4 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTFIRSW*HSNSTS
Trigger: AGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAA...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATGAAGGAGGAGATCCATaGTTCATGCTCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDEGGDP*FMLRCE
Trigger: CTCACATCTGAGCATGAAGCATGGATCTCCTCCTTC...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATTCCCGGGAAAACCACTaGAGAGATGATGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNSRENH*RDDGVG
Trigger: ACCCACCCCATCATCTCTGCAGTGGTTTTCCCGGGA...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTAGGCTGAGCGTGATGTaGAGCTTTGGGGTGGGTATC +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFRLSVM*SFGVGI
Trigger: GATACCCACCCCAAAGCTGCACATCACGCTCAGCCT...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGCAGGGTAGGTGCTaGACAAAATCATCAATAAGA +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRMQGRC*TKSSIR
Trigger: TCTTATTGATGATTTTGTGCAGCACCTACCCTGCAT...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGAATGCAGGGTAGGTGCTaGACAAAATCATCAATAAGA +
Preference number: 4 (lower is better)
Translates to: GLESQLRLDWFLTATSSRMQGRC*TKSSIR
Trigger: TCTTATTGATGATTTTGTGCAGCACCTACCCTGCAT...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCATATAATTCTTATTTATaGAGGGTAGGTGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: SRGPLEKAEIPKPCSALAYNSYL*RVGAAQ
Trigger: TTGTGCAGCACCTACCCTGCATAAATAAGAATTATA...TGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCGTGACATCACAAGTATaGTCCCATAGTCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIVTSQV*SHSLVP
Trigger: TGGCACCAGACTATGGGAGCATACTTGTGATGTCAC...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCAAGGTCCATTTCCATaGAAGAGCCATGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWQGPFP*KSHELH
Trigger: ATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTTTCATCAGCCTCTGGTaGTCGGTAAAGCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSFISLW*SVKLCN
Trigger: GTTACACAGCTTTACCGACCACCAGAGGCTGATGAA...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACCATCGAGCGTTTCTCTaGGCTTCCTGTCTATGTGTA +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHHRAFL*ASCLCV
Trigger: TACACATAGACAGGAAGCCCAGAGAAACGCTCGATG...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATGTTCAGCTGAGGCTTGACTaGTTCCTTACAGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: YKHHIHYLSRCFDSQGDVQLRLD*FLTATS
Trigger: GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTG...AACATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTCTTCAGAGTGACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACTATGAACGCGATTCTTaGTTGGTGAGGCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: FFRVTSQVCSHSLVPSLYYERDS*LVRLTH
Trigger: ATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATA...GTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTCAAGCTAAGATGGTTTaGGTCGTCTTGCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFQAKMV*VVLPTR
Trigger: GCGGGTGGGCAAGACGACCCAAACCATCTTAGCTTG...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGAAGAAGGTTTGCTCCCTaGTGCGGTCGCTCACAACCA +
Preference number: 4 (lower is better)
Translates to: THREMLIIIPQKRPVYTRRRFAP*CGRSQP
Trigger: TGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCT...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGACCTTTATTCTCGCGATaGTCCTTCCGTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: THREMLIIIPQKRPVYTRPLFSR*SFRLGH
Trigger: GTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGG...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGAGAAATACCTGGCGTaGCAGCTTCCAGCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFEKYLA*QLPALL
Trigger: CAACAGGGCTGGAAGCTGCCACGCCAGGTATTTCTC...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAGTTGGGAGGATGGATGAATaGGTGATTTTTAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: FGSETQHPRTPLLNVQLVGRMDE*VIFRKW
Trigger: CCATTTTCTAAAAATCACCCATTCATCCATCCTCCC...AACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCGCAAAGCCTCCTTTCTaGGAGATCTCGTTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: NHQCYDDQFSSHRSGLVSAKPPF*EISLGP
Trigger: AGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGC...GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GTTCCTTCTGAGTATAGCCAAGGTCCATTTCCATGCAAGAGCCATGAACTTCATAGTGTTTCAGCCCATTaGCCCAAATGCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: VPSEYSQGPFPCKSHELHSVSAH*PKCLGL
Trigger: CAGTCCCAAGCATTTGGGCCAATGGGCTGAAACACT...ATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTGGCTATACTCAGAAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 72 bp TTAAGACGTGCCTCAATCACGGTGATAAGTGGCCATTaGGGCAAGATGCCAGACATCTCAGTGCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: LRRASITVISGH*GKMPDISVPLF
Trigger: GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
3UTR CAA 72 bp TGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATaGGTTTCCAGGGATGGTGCAGAGGCGTGCATTGAG +
Preference number: 4 (lower is better)
Translates to: CYDDQFSSHRSG*VSRDGAEACIE
Trigger: CTCAATGCACGCCTCTGCACCATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATCCTCAGGGATGTGAATaGCCATGCTGTTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNPQGCE*PCCCGF
Trigger: GAAACCGCAACAGCATGGTCATTCACATCCCTGAGG...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATGTTAGTTGTGTAGGGGAATaGGTAGAGCATTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: YKHHIHYLSRCFDSQGDVSCVGE*VEHSPS
Trigger: GCTGGGCGAATGCTCTACTCATTCCCCTACACAACT...AACATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGGACGATTTCCCCAACTaGGTAGTGACAGACCTTCTA +
Preference number: 4 (lower is better)
Translates to: RSGFLSEAGAILIQPLPLDDFPN*VVTDLL
Trigger: TAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTC...CAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACAAAGGTGGGGGAAAATaGGACCAAGAGACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHKGGGK*DQETKK
Trigger: TTTCTTGGTCTCTTGGTCTCATTTTCCCCCACCTTT...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATAAAGGTGGGGGAAAATaGGACCAAGAGACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDKGGGK*DQETKK
Trigger: TTTCTTGGTCTCTTGGTCTCATTTTCCCCCACCTTT...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACGCCAAAAGCAGGCTATaGTGTGTGATGGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHAKSRL*CVMGKK
Trigger: TTTCTTTCCCATCACACATCATAGCCTGCTTTTGGC...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CTCCACCAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACTGCGTGGACAAATCTTaGTCAAAACGAAAGGTTACT +
Preference number: 4 (lower is better)
Translates to: LHQKCCHKKTVWTQFPDDCVDKS*SKRKVT
Trigger: AGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCA...GTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp ACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCCCTCTAAACTCTTCCTaGGACCAATGTGAACTTTAC +
Preference number: 4 (lower is better)
Translates to: TVISGHLGKMPDISVPLFPLNSS*DQCELY
Trigger: GTAAAGTTCACATTGGTCTCAGGAAGAGTTTAGAGG...GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATTTTATCCGAAGCTGGTaGCATTCTAATTCAACCTCT +
Preference number: 4 (lower is better)
Translates to: KTCLNHGDKWPFGQDARHFIRSW*HSNSTS
Trigger: AGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAA...ATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTTTATGCAGGGTAGGTaGTGCACAAAATCATCAATA +
Preference number: 4 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRFMQGR*CTKSSI
Trigger: TATTGATGATTTTGTGCAGCACCTACCCTGCATAAA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp ACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCCCGTTGAATCACCAGTaGTATGATGACCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TVISGHLGKMPDISVPLFPLNHQ*YDDQFS
Trigger: AGAAAACTGGTCATCATAGCACTGGTGATTCAACGG...GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTATGGAAAACACAAGCTaGCAGATCGCTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFMENTS*QIAGCP
Trigger: AGGGCACCCAGCGATCTGGCAGCTTGTGTTTTCCAT...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647605.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTAAACCGTTCTCTCTTTaGATGAATGAGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSKPFSL*MNESAL
Trigger: GAGAGCCGACTCATTCATCCAAAGAGAGAACGGTTT...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTTGTGCAGCTTTGGGGTaGGTATCCTCTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFCAALG*VSSQLC
Trigger: ACAGAGCTGAGAGGATACCCACCCCAAAGCTGCACA...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGAGTGTTTCAGCCCATTaGCCCAAATGCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: KARSGFLSEAGAILIQPLSVSAH*PKCLGL
Trigger: CAGTCCCAAGCATTTGGGCCAATGGGCTGAAACACT...CAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 72 bp GACTGGTTCCTTACAGCCACCAGCTCTAGACACATTTaGAAAAGCGAGATCTGGATTTTTATCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: DWFLTATSSRHI*KSEIWIFIRSW
Trigger: CCAGCTTCGGATAAAAATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
3UTR CAA 72 bp ATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTaGTCACGACACACGTGCACACAGAAGCACACACAC +
Preference number: 4 (lower is better)
Translates to: MGKKTEYLILPV*SRHTCTQKHTH
Trigger: GTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
3UTR CAA 72 bp TTGGCCCAAATGCTTGGGACTGGTGGCATTCAGGTGTaGTCTCCTTTAAGAAATCCTGTAGGTCTACTCTTT +
Preference number: 4 (lower is better)
Translates to: LAQMLGTGGIQV*SPLRNPVGLLF
Trigger: AAAGAGTAGACCTACAGGATTTCTTAAAGGAGACAACACCTGAATGCCACCAGTCCCAAGCATTTGGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
3UTR CAA 72 bp GCATTAAAGTACATGCACAGCCTTTTCAGAGGAGTCTaGAATGCTCCAGTGTTTCAGCCCATTGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: ALKYMHSLFRGV*NAPVFQPIGPN
Trigger: ATTTGGGCCAATGGGCTGAAACACTGGAGCATTCAAGACTCCTCTGAAAAGGCTGTGCATGTACTTTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAACCTGACAATTCCAGTTaGATGGTAAATTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQPDNSS*MVNCWN
Trigger: GTTCCAACAATTTACCATGCAACTGGAATTGTCAGG...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGTTTATGCAGGGTAGGTaGTGCACAAAATCATCAATA +
Preference number: 4 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWFMQGR*CTKSSI
Trigger: TATTGATGATTTTGTGCAGCACCTACCCTGCATAAA...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GAGGCGTGCATTGAGTTACCCTGTTTCCACTTCAGCAAGTTAAGACGTGCCTCATTTATGCAGGGTAGGTaGTGCACAAAATCATCAATA +
Preference number: 4 (lower is better)
Translates to: EACIELPCFHFSKLRRASFMQGR*CTKSSI
Trigger: TATTGATGATTTTGTGCAGCACCTACCCTGCATAAA...TGAGGCACGTCTTAACTTGCTGAAGTGGAAACAGGGTAACTCAATGCACGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGTGCCAGACATCTCAGTaGCTTTATTCTCGCGATGGT +
Preference number: 4 (lower is better)
Translates to: SAMMTSFLLIDLDWFPGMCQTSQ*LYSRDG
Trigger: ACCATCGCGAGAATAAAGGCACTGAGATGTCTGGCA...CATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGAACCTCTGCCACTGCTaGTTAAGAGATGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SAMMTSFLLIDLDWFPGMNLCHC*LRDAED
Trigger: ATCCTCAGCATCTCTTAACCAGCAGTGGCAGAGGTT...CATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGATTGAAAAGCGAGATCTaGATTTTTATCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRLKSEI*IFIRSW
Trigger: CCAGCTTCGGATAAAAATCCAGATCTCGCTTTTCAA...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCGACGAGTTGGACCAATaGAAATTAACACCAACTATG +
Preference number: 4 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPDELDQ*KLTPTM
Trigger: CATAGTTGGTGTTAATTTCCATTGGTCCAACTCGTC...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp TTCTTCAGAGTGACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACGACGAGTTGGACCAATaGAAATTAACACCAACTATG +
Preference number: 4 (lower is better)
Translates to: FFRVTSQVCSHSLVPSLYDELDQ*KLTPTM
Trigger: CATAGTTGGTGTTAATTTCCATTGGTCCAACTCGTC...GTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATGTCTGGCTGGAAAGGTaGGGGAAAATGAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNVWLER*GKMRPR
Trigger: TCTTGGTCTCATTTTCCCCCACCTTTCCAGCCAGAC...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTTCAGCTCTGTCTCCGTaGTCTTGGTCTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFSALSP*SWSHIC
Trigger: ACAGATGTGAGACCAAGACCACGGAGACAGAGCTGA...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATACTGGCAAGCTAAGATaGTTTGGGTCGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNTGKLR*FGSSCP
Trigger: TGGGCAAGACGACCCAAACCATCTTAGCTTGCCAGT...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTAGCAGGTCTTCCCTTTaGGGTCATCCCCTATTGAGA +
Preference number: 4 (lower is better)
Translates to: KSEIWIFIRSWCHSNSTSSRSSL*GHPLLR
Trigger: TCTCAATAGGGGATGACCCCAAAGGGAAGACCTGCT...AGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGAAATGCTTGGGACTGGTaGCATTCAGGTGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: THREMLIIIPQKRPVYTRNAWDW*HSGVVS
Trigger: GGAGACAACACCTGAATGCCACCAGTCCCAAGCATT...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTCCAAATGCTTGGGACTaGTGGCATTCAGGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFPNAWD*WHSGVV
Trigger: GACAACACCTGAATGCCACCAGTCCCAAGCATTTGG...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGCTCTAGACACATTTTaGAAAGCGAGATCTGGATTT +
Preference number: 4 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSALDTF*KARSGF
Trigger: AAATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGC...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR TCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTAAAAGGTGGGGGAAAATaGGACCAAGAGACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVKGGGK*DQETKK
Trigger: TTTCTTGGTCTCTTGGTCTCATTTTCCCCCACCTTT...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTTTTTCCCGTTTCCCCTaGCAATTCCAGTTGCATGGT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFFSRFP*QFQLHG
Trigger: ACCATGCAACTGGAATTGTCAGGGGAAACGGGAAAA...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
43% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATTTCAACCTCTGCCACTaGTGGTTAAGAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNFNLCH*WLRDAE
Trigger: CTCAGCATCTCTTAACCAGCAGTGGCAGAGGTTGAA...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATCCTGACAATTCCAGTTaGATGGTAAATTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDPDNSS*MVNCWN
Trigger: GTTCCAACAATTTACCATGCAACTGGAATTGTCAGG...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATTTCATCAGCCTCTGGTaGTCGGTAAAGCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNFISLW*SVKLCN
Trigger: GTTACACAGCTTTACCGACCACCAGAGGCTGATGAA...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGATGATGATGAATGAGTaGAAGGGCTTGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SAMMTSFLLIDLDWFPGMMMMNE*KGLAVS
Trigger: AGAGACTGCCAAGCCCTTCCACTCATTCATCATCAT...CATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCATTGAAAAGCGAGATCTaGATTTTTATCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ARSGFLSEAGAILIQPLPLKSEI*IFIRSW
Trigger: CCAGCTTCGGATAAAAATCCAGATCTCGCTTTTCAA...TGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CCA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACAGTTTGTGTCCTCATATaGAAAACACAAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GRSLRGQILIKTKGYLATVCVLI*KTQAAR
Trigger: TCTGGCAGCTTGTGTTTTCCATATGAGGACACAAAC...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649696.1
CDS-3UTR CCA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGGGAGGATGGATGAATaGGTGATTTTTAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSGRMDE*VIFRKW
Trigger: CCATTTTCTAAAAATCACCCATTCATCCATCCTCCC...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGTTTTATGATGATGAATaGGTGGAAGGGCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SAMMTSFLLIDLDWFPGMFYDDE*VEGLGS
Trigger: ACTGCCAAGCCCTTCCACTCATTCATCATCATAAAA...CATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp GAAGGCTATAGAACTTGTCAGAGCAAAGATCTCAAGGACAGAGGTCACAAAGTATTTTATGATGATGAATaGGTGGAAGGGCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: EGYRTCQSKDLKDRGHKVFYDDE*VEGLGS
Trigger: ACTGCCAAGCCCTTCCACTCATTCATCATCATAAAA...TACTTTGTGACCTCTGTCCTTGAGATCTTTGCTCTGACAAGTTCTATAGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAAAGGTGGGGGAAAATaGGACCAAGAGACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: NHQCYDDQFSSHRSGLVSKGGGK*DQETKK
Trigger: TTTCTTGGTCTCTTGGTCTCATTTTCCCCCACCTTT...GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATGCAGGCTATGATGTGTaGTGGGAAAGAAAACGGAAT +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNAGYDV*WERKRN
Trigger: ATTCCGTTTTCTTTCCCATCACACATCATAGCCTGC...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp TGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGTTCCCCTTGAAGGTTaGGAACTGTCAACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: CIYYKHHIHYLSRCFDSQVPLEG*ELSTLA
Trigger: GGCCAAAGTTGACAGTTCTCAACCTTCAAGGGGAAC...CTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACACCTGACAATTCCAGTTaGATGGTAAATTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GRSLRGQILIKTKGYLATPDNSS*MVNCWN
Trigger: GTTCCAACAATTTACCATGCAACTGGAATTGTCAGG...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAATATAATTCTTATTTATaGAGGGTAGGTGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQYNSYL*RVGAAQ
Trigger: TTGTGCAGCACCTACCCTGCATAAATAAGAATTATA...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTAAAGGAAGTGTGAGATaGTCTGTCTCCACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFKGSVR*SVSTSK
Trigger: CTTTGAGGTGGAGACAGAGCATCTCACACTTCCTTT...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCTATGAACGCGATTCTTaGTTGGTGAGGCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: NHQCYDDQFSSHRSGLVSYERDS*LVRLTH
Trigger: ATGAGTCAGCCTCACCAACCAAGAATCGCGTTCATA...GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAGACGAGTTGGACCAATaGAAATTAACACCAACTATG +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLDELDQ*KLTPTM
Trigger: CATAGTTGGTGTTAATTTCCATTGGTCCAACTCGTC...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR TCA 90 bp AAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGGCTCTAGACACATTTTaGAAAGCGAGATCTGGATTT +
Preference number: 4 (lower is better)
Translates to: KARSGFLSEAGAILIQPLALDTF*KARSGF
Trigger: AAATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGC...CAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp GCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCATATAATTCTTATTTATaGAGGGTAGGTGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: ARSGFLSEAGAILIQPLPYNSYL*RVGAAQ
Trigger: TTGTGCAGCACCTACCCTGCATAAATAAGAATTATA...TGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACAAATCAAAAACCTTGTaGGTTTTGTCTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHKSKTL*VLSSRF
Trigger: AAAACGGGAAGACAAAACCCACAAGGTTTTTGATTT...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CCA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACAGGGGAAATTTCAACATaGGATGTAGCATTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: GRSLRGQILIKTKGYLATGEIST*DVALKY
Trigger: GTACTTTAATGCTACATCCCATGTTGAAATTTCCCC...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTTTTATCCGAAGCTGGTaGCATTCTAATTCAACCTCT +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFFIRSW*HSNSTS
Trigger: AGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAA...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AAAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTTTTATCCGAAGCTGGTaGCATTCTAATTCAACCTCT +
Preference number: 4 (lower is better)
Translates to: KSEIWIFIRSWCHSNSTSFIRSW*HSNSTS
Trigger: AGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAA...AGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTCCTGACAATTCCAGTTaGATGGTAAATTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFPDNSS*MVNCWN
Trigger: GTTCCAACAATTTACCATGCAACTGGAATTGTCAGG...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCCCTGACAATTCCAGTTaGATGGTAAATTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: NHQCYDDQFSSHRSGLVSPDNSS*MVNCWN
Trigger: GTTCCAACAATTTACCATGCAACTGGAATTGTCAGG...GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTATGCAGGGTAGGTGCTaGACAAAATCATCAATAAGA +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFMQGRC*TKSSIR
Trigger: TCTTATTGATGATTTTGTGCAGCACCTACCCTGCAT...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATATAATTCTTATTTATaGAGGGTAGGTGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLYNSYL*RVGAAQ
Trigger: TTGTGCAGCACCTACCCTGCATAAATAAGAATTATA...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATTTTATGCAGGGTAGGTaGTGCACAAAATCATCAATA +
Preference number: 4 (lower is better)
Translates to: NHSHILIPILTQAFQHYNFMQGR*CTKSSI
Trigger: TATTGATGATTTTGTGCAGCACCTACCCTGCATAAA...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR GCA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTTATAATTCTTATTTATaGAGGGTAGGTGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFYNSYL*RVGAAQ
Trigger: TTGTGCAGCACCTACCCTGCATAAATAAGAATTATA...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS GCA 90 bp CCCTCCGGCGTCCGGGCGTCCCGGGAGGCGGCCGCCGCGCTGGTCTaGCCCGGGCGCTACGTGCGTGCGCGCCGTTGGGAGCCCGAATGT +
Preference number: 5 (lower is better)
Translates to: PSGVRASREAAAALV*PGRYVRARRWEPEC
Trigger: ACATTCGGGCTCCCAACGGCGCGCACGCACGTAGCGCCCGGGGCAGACCAGCGCGGCGGCCGCCTCCCGGGACGCCCGGACGCCGGAGGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS CCA 90 bp AGGGCGGCCGCGGGGCCCGGTACCCCTGTGGGTCCAGCTCGCGGGTaGCGGTGCCCAGCAAGGAGCCTGCAGGTCCGCGCGCCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: RAAAGPGTPVGPARG*RCPARSLQVRAPSG
Trigger: TCCGCTGGGCGCGCGGACCTGCAGGCTCCTTGCTGGGCACCGCCACCCGCGAGCTGGACCCACAGGGGTACCGGGCCCCGCGGCCGCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS GCA 90 bp GCCGCGGGGCCCGGTACCCCTGTGGGTCCAGCTCGCGGGTGGCGGTaGCCAGCAAGGAGCCTGCAGGTCCGCGCGCCCAGCGGAACCTGC +
Preference number: 5 (lower is better)
Translates to: AAGPGTPVGPARGWR*PARSLQVRAPSGTC
Trigger: GCAGGTTCCGCTGGGCGCGCGGACCTGCAGGCTCCTTGCTGGGCACCGCCACCCGCGAGCTGGACCCACAGGGGTACCGGGCCCCGCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS GCA 90 bp GCGCGGGCCCGGGCTCAGCCGAGAAGGCGGACAGGCACAGGAGGCTaGTCGAGCGCCGGGGCCAGGCGTCCGGGAACCCCGACACCCTGC +
Preference number: 5 (lower is better)
Translates to: ARARAQPRRRTGTGG*SSAGARRPGTPTPC
Trigger: GCAGGGTGTCGGGGTTCCCGGACGCCTGGCCCCGGCGCTCGAGCAGCCTCCTGTGCCTGTCCGCCTTCTCGGCTGAGCCCGGGCCCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CAA 90 bp CCGGGCCCTGCAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGGGCACTGCCCAGTGCTaGCTGCTCCTGTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PGPAGGPGERVADGETPRGTAQC*LLLWPG
Trigger: CCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGCC...CCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCAGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS GCA 90 bp GCGGTGCCACCGAGCGGCCGCCATAGTCCTGCGAGCGGTAGCAGGTaGAGGAGCACACAGACTGCAGGTCCGGGACGTCCGCCTTGTACC +
Preference number: 5 (lower is better)
Translates to: AVPPSGRHSPASGSR*RSTQTAGPGRPPCT
Trigger: GGTACAAGGCGGACGTCCCGGACCTGCAGTCTGTGTGCTCCTGCACCTGCTACCGCTCGCAGGACTATGGCGGCCGCTCGGTGGCACCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000523477.2
ENST00000647605.1
ENST00000648164.1
ENST00000648481.1
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS TCA 90 bp TCCGCCTTGTACCTGGGCCGGCTGGGCCGCGGCTCCTCAGGGATGTaGATGACCATGCTGTTGCGGTTTCCGGCGAGGGATGCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SALYLGRLGRGSSGM*MTMLLRFPARDALS
Trigger: AGAGAGGGCATCCCTCGCCGGAAACCGCAACAGCATGGTCATTCACATCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000523477.2
ENST00000647605.1
ENST00000648164.1
ENST00000648481.1
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS TCA 90 bp CCTTGTACCTGGGCCGGCTGGGCCGCGGCTCCTCAGGGATGTGAATaGCCATGCTGTTGCGGTTTCCGGCGAGGGATGCCCTCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: PCTWAGWAAAPQGCE*PCCCGFRRGMPSLQ
Trigger: CTGAAGAGAGGGCATCCCTCGCCGGAAACCGCAACAGCATGGTCATTCACATCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000523477.2
ENST00000647605.1
ENST00000648164.1
ENST00000648481.1
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTTTCCGGGACGTCCGCCTaGTACCTGGGCCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GLCQRARHLELHPNRSLFSGTSA*YLGRLG
Trigger: GCCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGA...AAAGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp AGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGTCCGGGACGTCCGCCTaGTACCTGGGCCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RELQTGKPHGTQALSLFMSGTSA*YLGRLG
Trigger: GCCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGA...CATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp CACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGTCCGGGACGTCCGCCTaGTACCTGGGCCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HSRGPLEKAEIPKPCSALSGTSA*YLGRLG
Trigger: GCCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGA...CAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCTCCGGGACGTCCGCCTaGTACCTGGGCCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GSQVDLAGLESQLRLDWFSGTSA*YLGRLG
Trigger: GCCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGA...GAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGATCTGTCCCCGTCCTCTGTaGGGGCCGCCTGCACGGTCC +
Preference number: 5 (lower is better)
Translates to: ERHGQRRRGRSLRGQILICPRPL*GPPARS
Trigger: GGACCGTGCAGGCGGCCCCAACAGAGGACGGGGACA...GATCAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCCAGCTTCCAGCCCTGTaGTATGGGGCACACTCCACC +
Preference number: 5 (lower is better)
Translates to: IPKPCSALAVRPSIHGRLQLPAL*YGAHST
Trigger: GGTGGAGTGTGCCCCATACAACAGGGCTGGAAGCTG...GAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGTCCGGGACGTCCGCCTaGTACCTGGGCCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRSGTSA*YLGRLG
Trigger: GCCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGA...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTGTCCCCGTCCTCTGTaGGGGCCGCCTGCACGGTCC +
Preference number: 5 (lower is better)
Translates to: LAGLESQLRLDWFLTATSCPRPL*GPPARS
Trigger: GGACCGTGCAGGCGGCCCCAACAGAGGACGGGGACA...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp ACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGTCTATGTGGCCAGGTGAGAGAGTaGCAGACGGGGAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: TGLRGPSHRAFLWASCLCGQVRE*QTGKPH
Trigger: GTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCC...ACATAGACAGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCGGATCTCCTCGGCTTaGAGTTTCTCCTCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: PSTAEVHLRRQKSRSRVRRISSA*SFSSSR
Trigger: GCGCGAGGAGGAGAAACTCAAAGCCGAGGAGATCCG...CCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR CAA 90 bp GGGAAGGATGAGGCTGCCTCACTTACAGAAGGAGAGAGCTGTCCCCGTCCTCTGAACATGCAGAAGGCCTaGCCCGCATCGGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: GKDEAASLTEGESCPRPLNMQKA*PASVPG
Trigger: ACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGTT...CAGAGGACGGGGACAGCTCTCTCCTTCTGTAAGTGAGGCAGCCTCATCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCTGAGGACGACCAGGTaGAGGAAGGCCCCGATGACC +
Preference number: 5 (lower is better)
Translates to: EKAEIPKPCSALAVRPSILRTTR*RKAPMT
Trigger: GGTCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAG...GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGCTCTGTGGCCCGGCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCGCCAGGCAGGTGCCGTaGAATCACCAGTGCTATGAT +
Preference number: 5 (lower is better)
Translates to: SSVARPLRGCLGYASEPGARQVP*NHQCYD
Trigger: ATCATAGCACTGGTGATTCAACGGCACCTGCCTGGC...GCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGGGCCACAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCAAACATGCAGAAGGCCTaGCCCGCATCGGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: EGRNPEAVFGFGSETQHPNMQKA*PASVPG
Trigger: ACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGTT...TGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAAACATGCAGAAGGCCTaGCCCGCATCGGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: GYPLSSVSVVLVSHLSRENMQKA*PASVPG
Trigger: ACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGTT...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCTGAGGACGACCAGGTaGAGGAAGGCCCCGATGACC +
Preference number: 5 (lower is better)
Translates to: LRRFPQLSSDRPSSSVARLRTTR*RKAPMT
Trigger: GGTCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAG...CCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAATCCGGGACGTCCGCCTaGTACCTGGGCCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQSGTSA*YLGRLG
Trigger: GCCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGA...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCAAGAGCCCGACGGGCTaGCGGGGACCCTCACATCGA +
Preference number: 5 (lower is better)
Translates to: LAGLESQLRLDWFLTATSKSPTG*RGPSHR
Trigger: TCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTT...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TGTGGCCGGGGCCATAGAAGGTTTGCTCCCTGGTGCGGTCGCTCACAACCAAAACCGGCCTTTAAGAGGTaGTCTGGGCTATGCCAGCGA +
Preference number: 5 (lower is better)
Translates to: CGRGHRRFAPWCGRSQPKPAFKR*SGLCQR
Trigger: TCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGG...TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCCGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGCTGACTCATTTGAGTaGCGAGGCAGTGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: RARRACGDPHIERFSGLPADSFE*RGSGLE
Trigger: TTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGC...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTCTGTCTCCGTGGTCTaGGTCTCACATCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSSVSVV*VSHLSR
Trigger: CCGGGACAGATGTGAGACCAAGACCACGGAGACAGA...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GCAGAGGCTGGTCCTAGGCGTGCGAGATGCCAGGGCCTGAGCAGTATCCACACCGTGATAAGTGGCCATTaGGGCAAGATGCCAGACATC +
Preference number: 5 (lower is better)
Translates to: AEAGPRRARCQGLSSIHTVISGH*GKMPDI
Trigger: GATGTCTGGCATCTTGCCCAAATGGCCACTTATCAC...GGTGTGGATACTGCTCAGGCCCTGGCATCTCGCACGCCTAGGACCAGCCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS GCA 90 bp CTCAGGGATGTGAATGACCATGCTGTTGCGGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCGCCGCTCATCCTCACTGTTCATGGT +
Preference number: 5 (lower is better)
Translates to: LRDVNDHAVAVSGEG*PLFSIPPLILTVHG
Trigger: ACCATGAACAGTGAGGATGAGCGGCGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAACCGCAACAGCATGGTCATTCACATCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000523477.2
ENST00000647605.1
ENST00000648164.1
ENST00000648481.1
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCAAAGCCGTGTTCGGCTTaGGCAGTGAGACCCAGCATC +
Preference number: 5 (lower is better)
Translates to: EGRNPEAVFGFGSETQHPKPCSA*AVRPSI
Trigger: GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTT...TGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAAGCCGTGTTCGGCTTaGGCAGTGAGACCCAGCATC +
Preference number: 5 (lower is better)
Translates to: RELQTGKPHGTQALSLFMKPCSA*AVRPSI
Trigger: GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTT...CATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAAAGAGCCCGACGGGCTaGCGGGGACCCTCACATCGA +
Preference number: 5 (lower is better)
Translates to: QVDLAGLESQLRLDWFLTKSPTG*RGPSHR
Trigger: TCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTT...TGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTCTTCAGAGTGACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACTGTCCCCGTCCTCTGTaGGGGCCGCCTGCACGGTCC +
Preference number: 5 (lower is better)
Translates to: FFRVTSQVCSHSLVPSLYCPRPL*GPPARS
Trigger: GGACCGTGCAGGCGGCCCCAACAGAGGACGGGGACA...GTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGTCACTCTGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTGTGAGGCTGACTCATTaGAGTTGCGAGGCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSVRLTH*SCEAVD
Trigger: GTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCAC...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCGGCCAGGTGAGAGAGTaGCAGACGGGGAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: LAGLESQLRLDWFLTATSGQVRE*QTGKPH
Trigger: GTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCC...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTTTCTGTCTCCGTGGTCTaGGTCTCACATCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GLCQRARHLELHPNRSLFSVSVV*VSHLSR
Trigger: CCGGGACAGATGTGAGACCAAGACCACGGAGACAGA...AAAGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CCGGGCCCTGCAGGAGGGCCAGGTGAGAGAGTTGCAGACGGGGAAACCCCACGGTTGCATGGTAAATTGTaGGAACTGGAGGTGACAAAA +
Preference number: 5 (lower is better)
Translates to: PGPAGGPGERVADGETPRLHGKL*ELEVTK
Trigger: TTTTGTCACCTCCAGTTCCAACAATTTACCATGCAA...CCGTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCCCTCCTGCAGGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAAGGCACTGCCCAGTGCTaGCTGCTCCTGTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQGTAQC*LLLWPG
Trigger: CCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGCC...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTCTCATAGATCTGGATaGGTTTCCAGGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: PEAVFGFGSETQHPRTPLSHRSG*VSRDGA
Trigger: TGCACCATCCCTGGAAACCAATCCAGATCTATGAGA...GAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CCTTTATTCTCGCGATGGTCCTTCCGTCTGGGGCACTGCCCAGTGCTTGCTGCTGCCAGGCAGGTGCCGTaGAATCACCAGTGCTATGAT +
Preference number: 5 (lower is better)
Translates to: PLFSRWSFRLGHCPVLAAARQVP*NHQCYD
Trigger: ATCATAGCACTGGTGATTCAACGGCACCTGCCTGGC...AGCAGCAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGATGTTGTACTTCCCCTaGATCCGGATCTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: RNPEAVFGFGSETQHPRTMLYFP*IRISSA
Trigger: AGCCGAGGAGATCCGGATCAAGGGGAAGTACAACAT...CGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR CAA 90 bp CCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCTCCTCGCTGCTGATGTaGTACTTCCCCTTGATCCGG +
Preference number: 5 (lower is better)
Translates to: PLEKAEIPKPCSALAVRPSSLLM*YFPLIR
Trigger: CCGGATCAAGGGGAAGTACAACATCAGCAGCGAGGA...GGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
CDS-3UTR CAA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCATCCTCGCTGCTGATGTaGTACTTCCCCTTGATCCGG +
Preference number: 5 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSSSLLM*YFPLIR
Trigger: CCGGATCAAGGGGAAGTACAACATCAGCAGCGAGGA...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR CAA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGCTGAGGACGACCAGGTaGAGGAAGGCCCCGATGACC +
Preference number: 5 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRLRTTR*RKAPMT
Trigger: GGTCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAG...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATCCGGGACGTCCGCCTaGTACCTGGGCCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLSGTSA*YLGRLG
Trigger: GCCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGA...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GTCAAACTGTCCTTTAAGCCTGTTACTGTAAGAGCCTCCACTGTGCCATATTCTTCCGGGACGTCCGCCTaGTACCTGGGCCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VKLSFKPVTVRASTVPYSSGTSA*YLGRLG
Trigger: GCCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGA...AGAATATGGCACAGTGGAGGCTCTTACAGTAACAGGCTTAAAGGACAGTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CCTTTATTCTCGCGATGGTCCTTCCGTCTGGGGCACTGCCCAGTGCTTGCTGCTAATGAGTGGAAGGGCTaGGCAGTCTCTACTCCTCGT +
Preference number: 5 (lower is better)
Translates to: PLFSRWSFRLGHCPVLAANEWKG*AVSTPR
Trigger: ACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCATT...AGCAGCAAGCACTGGGCAGTGCCCCAGACGGAAGGACCATCGCGAGAATAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TGTGGCCGGGGCCATAGAAGGTTTGCTCCCTGGTGCGGTCGCTCACAACCAAAAAATGAGTGGAAGGGCTaGGCAGTCTCTACTCCTCGT +
Preference number: 5 (lower is better)
Translates to: CGRGHRRFAPWCGRSQPKNEWKG*AVSTPR
Trigger: ACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCATT...TTTTGGTTGTGAGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCCGGCCACA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCAGCGAGCCAGGCACCTaGAGCTCCATCCAAACCGTT +
Preference number: 5 (lower is better)
Translates to: GSQVDLAGLESQLRLDWFSEPGT*SSIQTV
Trigger: AACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCT...GAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCGTGAGGCTGACTCATTaGAGTTGCGAGGCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: EKAEIPKPCSALAVRPSIVRLTH*SCEAVD
Trigger: GTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCAC...GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGTCTATGTACTAAGGGTAGGCGATaGAAGGCTGAGCGTGATGTG +
Preference number: 5 (lower is better)
Translates to: TGLRGPSHRAFLWASCLCTKGRR*KAERDV
Trigger: CACATCACGCTCAGCCTTCAATCGCCTACCCTTAGT...ACATAGACAGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AAAGGTTACTTAGCCACAGCAGGGACACTGCGTCACGATAGCAGCACTGAGAAGGGGGCCATAGAAGGTTaGCTCCCTGGTGCGGTCGCT +
Preference number: 5 (lower is better)
Translates to: KGYLATAGTLRHDSSTEKGAIEG*LPGAVA
Trigger: AGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCC...CTTCTCAGTGCTGCTATCGTGACGCAGTGTCCCTGCTGTGGCTAAGTAACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGAGTGCAGAGGCGTGCATaGAGTTACCCTGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: AEIPKPCSALAVRPSIHGVQRRA*SYPVST
Trigger: AGTGGAAACAGGGTAACTCAATGCACGCCTCTGCAC...TCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGCTCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCGATCTCGTTGGGGCCTaGAGACAGGCCAGTAAACCG +
Preference number: 5 (lower is better)
Translates to: GSQVDLAGLESQLRLDWFDLVGA*RQASKP
Trigger: CGGTTTACTGGCCTGTCTCAAGGCCCCAACGAGATC...GAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGAGCCCGACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGGTGGCATTCAGGTGTaGTCTCCTTTAAGAAATCCT +
Preference number: 5 (lower is better)
Translates to: RARRACGDPHIERFSGLPGGIQV*SPLRNP
Trigger: AGGATTTCTTAAAGGAGACAACACCTGAATGCCACC...AGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGAAACATGCAGAAGGCCTaGCCCGCATCGGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: GLESQLRLDWFLTATSSRNMQKA*PASVPG
Trigger: ACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGTT...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAATAGACACGTCAGTGTaGCGCATGCCACAGCACTTC +
Preference number: 5 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSIDTSV*RMPQHF
Trigger: GAAGTGCTGTGGCATGCGCAACACTGACGTGTCTAT...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATAGACACGTCAGTGTaGCGCATGCCACAGCACTTC +
Preference number: 5 (lower is better)
Translates to: LEKAEIPKPCSALAVRPSIDTSV*RMPQHF
Trigger: GAAGTGCTGTGGCATGCGCAACACTGACGTGTCTAT...GCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCTGAGGACGACCAGGTaGAGGAAGGCCCCGATGACC +
Preference number: 5 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWLRTTR*RKAPMT
Trigger: GGTCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGAACTGAGGACGACCAGGTaGAGGAAGGCCCCGATGACC +
Preference number: 5 (lower is better)
Translates to: RFLVGEADSFELRGSGLELRTTR*RKAPMT
Trigger: GGTCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAG...TTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GGCAGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTCTGAGGACGACCAGGTaGAGGAAGGCCCCGATGACC +
Preference number: 5 (lower is better)
Translates to: GSGLELLRRFPQLSSDRPLRTTR*RKAPMT
Trigger: GGTCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAG...AGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp ACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCC +
Preference number: 5 (lower is better)
Translates to: TAEVHLRRQKSRSRVRLWPRTPL*NVQLVP
Trigger: GGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGG...CCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCAACAGCAGAGGTCCACTaGAGAAGGCAGAAATCCCGA +
Preference number: 5 (lower is better)
Translates to: EGRNPEAVFGFGSETQHPTAEVH*RRQKSR
Trigger: TCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT...TGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATGGACCATCCCCACAGTaGTGTAGGGGAATGAGTAGA +
Preference number: 5 (lower is better)
Translates to: AFKRLSGLCQRARHLELHGPSPQ*CRGMSR
Trigger: TCTACTCATTCCCCTACACAACTGTGGGGATGGTCC...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTAATGAGTGGAAGGGCTaGGCAGTCTCTACTCCTCGT +
Preference number: 5 (lower is better)
Translates to: HSPSTAEVHLRRQKSRSRNEWKG*AVSTPR
Trigger: ACGAGGAGTAGAGACTGCCAAGCCCTTCCACTCATT...ACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACATGTCCCCGTCCTCTGTaGGGGCCGCCTGCACGGTCC +
Preference number: 5 (lower is better)
Translates to: GRSLRGQILIKTKGYLATCPRPL*GPPARS
Trigger: GGACCGTGCAGGCGGCCCCAACAGAGGACGGGGACA...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGGCTCTCAGGTGGACTaGGCAGGATTAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: HSRGPLEKAEIPKPCSALGSQVD*AGLESQ
Trigger: CTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC...CAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TGGGAACGGCACGGGCAAAGGCGCAGAGGTAGGAGTCTGCGTGGACAAATCTTGTGCGAGGCAGTGGACTaGAACTTCTCAGACGATTTC +
Preference number: 5 (lower is better)
Translates to: WERHGQRRRGRSLRGQILCEAVD*NFSDDF
Trigger: GAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGCA...CAAGATTTGTCCACGCAGACTCCTACCTCTGCGCCTTTGCCCGTGCCGTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTCTCTTGCGAGGCAGTGGACTaGAACTTCTCAGACGATTTC +
Preference number: 5 (lower is better)
Translates to: LGYASEPGTLSSIQTVLSCEAVD*NFSDDF
Trigger: GAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGCA...AGAGAGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp ACGGGCTTGCGGGGACCCTCACATCGAGCGTTTCTCTGGGCTTCCTGTCTATGTGAACGCGATTCTTGGTaGGTGAGGCTGACTCATTTG +
Preference number: 5 (lower is better)
Translates to: TGLRGPSHRAFLWASCLCERDSW*VRLTHL
Trigger: CAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTC...ACATAGACAGGAAGCCCAGAGAAACGCTCGATGTGAGGGTCCCCGCAAGCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAACTAAGGGTAGGCGATaGAAGGCTGAGCGTGATGTG +
Preference number: 5 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSTKGRR*KAERDV
Trigger: CACATCACGCTCAGCCTTCAATCGCCTACCCTTAGT...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATGTGCAGAGGCGTGCATaGAGTTACCCTGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: AFKRLSGLCQRARHLELHVQRRA*SYPVST
Trigger: AGTGGAAACAGGGTAACTCAATGCACGCCTCTGCAC...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGGCCAGGCAGGTGCCGTaGAATCACCAGTGCTATGAT +
Preference number: 5 (lower is better)
Translates to: TAEVHLRRQKSRSRVRLWARQVP*NHQCYD
Trigger: ATCATAGCACTGGTGATTCAACGGCACCTGCCTGGC...CCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACCGGCCTTATGAGCAGCTTCCAGCCCTGTaGTATGGGGCACACTCCACC +
Preference number: 5 (lower is better)
Translates to: TSQVCSHSLVPSLYRPYEQLPAL*YGAHST
Trigger: GGTGGAGTGTGCCCCATACAACAGGGCTGGAAGCTG...CTCATAAGGCCGGTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACCGTGCGTGCGCGCCGTaGGGAGCCCGAATGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHRACAP*GARMCV
Trigger: CACACACATTCGGGCTCCCAACGGCGCGCACGCACG...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CAA 90 bp AGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATGGCGGATCTCCTCGGCTTaGAGTTTCTCCTCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: RKEEIHASCSDVSFRGGWRISSA*SFSSSR
Trigger: GCGCGAGGAGGAGAAACTCAAAGCCGAGGAGATCCG...CCATCCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR CAA 90 bp CGCGATTCTTGGTTGGTGAGGCTGACTCATTTGAGTTGCGAGGCAGTGGACTTGTCCTCGCTGCTGATGTaGTACTTCCCCTTGATCCGG +
Preference number: 5 (lower is better)
Translates to: RDSWLVRLTHLSCEAVDLSSLLM*YFPLIR
Trigger: CCGGATCAAGGGGAAGTACAACATCAGCAGCGAGGA...CAAGTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCACCAACCAAGAATCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAATAGACACGTCAGTGTaGCGCATGCCACAGCACTTC +
Preference number: 5 (lower is better)
Translates to: GFGSETQHPRTPLLNVQLIDTSV*RMPQHF
Trigger: GAAGTGCTGTGGCATGCGCAACACTGACGTGTCTAT...TAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303015.2
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCGCTGACTCATTTGAGTaGCGAGGCAGTGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: LEKAEIPKPCSALAVRPSADSFE*RGSGLE
Trigger: TTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGC...GCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GCCTTTAAGAGGTTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATGCTGACTCATTTGAGTaGCGAGGCAGTGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: AFKRLSGLCQRARHLELHADSFE*RGSGLE
Trigger: TTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGC...ATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAACCTCTTAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGGAACGCGATTCTTGGTaGGTGAGGCTGACTCATTTG +
Preference number: 5 (lower is better)
Translates to: AEVHLRRQKSRSRVRLWQERDSW*VRLTHL
Trigger: CAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTC...CTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTGTCTGGGCTATGCCAGCGAGCCAGGCACCTTGAGCTCCATCCAAACCGTTCTGAACGCGATTCTTGGTaGGTGAGGCTGACTCATTTG +
Preference number: 5 (lower is better)
Translates to: LSGLCQRARHLELHPNRSERDSW*VRLTHL
Trigger: CAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTC...AGAACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCTGGCATAGCCCAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp CAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCGGCCAGGTGAGAGAGTaGCAGACGGGGAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: QKCCHKKTVWTQFPDDIPGQVRE*QTGKPH
Trigger: GTGGGGTTTCCCCGTCTGCAACTCTCTCACCTGGCC...GGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCTTTAAGAGGTTGTGGCCTGTATTTCCCTTaGGCCTGCTCTGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QLSSDRPSSSVARPLRGCGLYFP*ACSVWL
Trigger: CAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCC...ACAACCTCTTAAAGGCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAACCTCCACCAGAAGTGTaGCCACAAGAAAACAGTGTG +
Preference number: 5 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREPPPEV*PQENSV
Trigger: CACACTGTTTTCTTGTGGCAACACTTCTGGTGGAGG...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCTTTAAGAGATCTCGTTGGGGCCTaGAGACAGGCCAGTAAACCG +
Preference number: 5 (lower is better)
Translates to: FPQLSSDRPSSSVARPLRDLVGA*RQASKP
Trigger: CGGTTTACTGGCCTGTCTCAAGGCCCCAACGAGATC...TCTTAAAGGCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCACAGTGTTTCAGCCCATaGGCCCAAATGCTTGGGACT +
Preference number: 5 (lower is better)
Translates to: SRGPLEKAEIPKPCSALAQCFSP*AQMLGT
Trigger: AGTCCCAAGCATTTGGGCCAATGGGCTGAAACACTG...TGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACGCCGGTGCGCGAAGTTaGCTCGGCTCAACCCCCAAG +
Preference number: 5 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHAGARS*LGSTPK
Trigger: CTTGGGGGTTGAGCCGAGCAAACTTCGCGCACCGGC...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CAA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGACTGAGGACGACCAGGTaGAGGAAGGCCCCGATGACC +
Preference number: 5 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRLRTTR*RKAPMT
Trigger: GGTCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAG...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCC +
Preference number: 5 (lower is better)
Translates to: LESQLRLDWFLTATSSRHPRTPL*NVQLVP
Trigger: GGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGG...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GTTCCTTCTGAGTATAGCCAAGGTCCATTTCCATGCAAGAGCCATGAACTTCATAAGAGCCCGACGGGCTaGCGGGGACCCTCACATCGA +
Preference number: 5 (lower is better)
Translates to: VPSEYSQGPFPCKSHELHKSPTG*RGPSHR
Trigger: TCGATGTGAGGGTCCCCGCAAGCCCGTCGGGCTCTT...ATGAAGTTCATGGCTCTTGCATGGAAATGGACCTTGGCTATACTCAGAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AAGACGTGCCTCAATCACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATAGCGAGCCAGGCACCTaGAGCTCCATCCAAACCGTT +
Preference number: 5 (lower is better)
Translates to: KTCLNHGDKWPFGQDARHSEPGT*SSIQTV
Trigger: AACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCT...ATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGTGATTGAGGCACGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTGCTGACTCATTTGAGTaGCGAGGCAGTGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: GKPHGTQALSLFMNAILGADSFE*RGSGLE
Trigger: TTCAAGTCCACTGCCTCGCAACTCAAATGAGTCAGC...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp CCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCAGTTGCATGGTAAATaGTTGGAACTGGAGGTGACA +
Preference number: 5 (lower is better)
Translates to: PSTAEVHLRRQKSRSRVRQLHGK*LELEVT
Trigger: TGTCACCTCCAGTTCCAACAATTTACCATGCAACTG...CCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACATTCCCATCGGGGCCATAGAAGGTTaGCTCCCTGGTGCGGTCGCT +
Preference number: 5 (lower is better)
Translates to: KCCHKKTVWTQFPDDIPIGAIEG*LPGAVA
Trigger: AGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCC...GATGGGAATGTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGGTGATAAGTGGCCATTaGGGCAAGATGCCAGACATC +
Preference number: 5 (lower is better)
Translates to: TAEVHLRRQKSRSRVRLWVISGH*GKMPDI
Trigger: GATGTCTGGCATCTTGCCCAAATGGCCACTTATCAC...CCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTTGGGGTCATCCCCTATaGAGAGTAGGGAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: GKPHGTQALSLFMNAILGWGHPL*RVGRNF
Trigger: GAAATTCCTCCCTACTCTCAATAGGGGATGACCCCA...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTTGAATGTGCAGTTAGTTCATTGGCCCAAATGCTaGGGACTGGTGGCATTCAGG +
Preference number: 5 (lower is better)
Translates to: FGSETQHPRTPLLNVQLVHWPKC*GLVAFR
Trigger: CCTGAATGCCACCAGTCCCAAGCATTTGGGCCAATG...AACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTGTGGCCCGGCCTTTAAGACATTGGCCCAAATGCTaGGGACTGGTGGCATTCAGG +
Preference number: 5 (lower is better)
Translates to: FPQLSSDRPSSSVARPLRHWPKC*GLVAFR
Trigger: CCTGAATGCCACCAGTCCCAAGCATTTGGGCCAATG...TCTTAAAGGCCGGGCCACAGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACATGTTGTACTTCCCCTaGATCCGGATCTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: LESQLRLDWFLTATSSRHMLYFP*IRISSA
Trigger: AGCCGAGGAGATCCGGATCAAGGGGAAGTACAACAT...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000650269.1
CDS-3UTR CAA 90 bp TCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTATGTTGTACTTCCCCTaGATCCGGATCTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: SQVDLAGLESQLRLDWFLMLYFP*IRISSA
Trigger: AGCCGAGGAGATCCGGATCAAGGGGAAGTACAACAT...AAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000650269.1
CDS-3UTR CAA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGAAACATGCAGAAGGCCTaGCCCGCATCGGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRNMQKA*PASVPG
Trigger: ACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGTT...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGATAGACACGTCAGTGTaGCGCATGCCACAGCACTTC +
Preference number: 5 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRIDTSV*RMPQHF
Trigger: GAAGTGCTGTGGCATGCGCAACACTGACGTGTCTAT...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTACTGAGGACGACCAGGTaGAGGAAGGCCCCGATGACC +
Preference number: 5 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLLRTTR*RKAPMT
Trigger: GGTCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAG...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTCCACCAGAAGTGTTGCCACAAGAAAACAGTGTGGACCCAGTTTCCTGATGACCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCC +
Preference number: 5 (lower is better)
Translates to: LHQKCCHKKTVWTQFPDDPRTPL*NVQLVP
Trigger: GGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGG...GTCATCAGGAAACTGGGTCCACACTGTTTTCTTGTGGCAACACTTCTGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGACCGGCCTTTAAGAGGTaGTCTGGGCTATGCCAGCGA +
Preference number: 5 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRPAFKR*SGLCQR
Trigger: TCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGG...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCGAACGCGATTCTTGGTaGGTGAGGCTGACTCATTTG +
Preference number: 5 (lower is better)
Translates to: LAGLESQLRLDWFLTATSERDSW*VRLTHL
Trigger: CAAATGAGTCAGCCTCACCAACCAAGAATCGCGTTC...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GCCCAGCACAGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGCTGCGTGGACAAATCTaGATCAAAACGAAAGGTTAC +
Preference number: 5 (lower is better)
Translates to: AQHSRGPLEKAEIPKPCSLRGQI*IKTKGY
Trigger: GTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAG...CGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGTGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGAGTGCAGAGGCGTGCATaGAGTTACCCTGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: GLESQLRLDWFLTATSSRVQRRA*SYPVST
Trigger: AGTGGAAACAGGGTAACTCAATGCACGCCTCTGCAC...TCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGCAGAGGTCCACTTGAGAAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCATCTCATAGATCTGGATaGGTTTCCAGGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: SRGPLEKAEIPKPCSALASHRSG*VSRDGA
Trigger: TGCACCATCCCTGGAAACCAATCCAGATCTATGAGA...TGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AAGGCAGAAATCCCGAAGCCGTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACATCTCAGTAGGTGCTTaGACTCACAGGGAGATGTTA +
Preference number: 5 (lower is better)
Translates to: KAEIPKPCSALAVRPSIHISVGA*THREML
Trigger: TAACATCTCCCTGTGAGTCAAAGCACCTACTGAGAT...GTGGATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTTCGGGATTTCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS CCA 90 bp ATTGACACAGATAGTGTAGTGGAGAAACCAGCTCTGTATGCAGGGTaGTCTCAGCGTCCCTTTAATTTGCTCCAAGGGCCTGCTGCATGC +
Preference number: 5 (lower is better)
Translates to: IDTDSVVEKPALYAG*SQRPFNLLQGPAAC
Trigger: GCATGCAGCAGGCCCTTGGAGCAAATTAAAGGGACGCTGAGACCACCCTGCATACAGAGCTGGTTTCTCCACTACACTATCTGTGTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519923.1
CDS-3UTR CAA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTACGGATCTCCTCGGCTTaGAGTTTCTCCTCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLRISSA*SFSSSR
Trigger: GCGCGAGGAGGAGAAACTCAAAGCCGAGGAGATCCG...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR CAA 90 bp GTCAAACTGTCCTTTAAGCCTGTTACTGTAAGAGCCTCCACTGTGCCATATTCTCGGATCTCCTCGGCTTaGAGTTTCTCCTCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: VKLSFKPVTVRASTVPYSRISSA*SFSSSR
Trigger: GCGCGAGGAGGAGAAACTCAAAGCCGAGGAGATCCG...AGAATATGGCACAGTGGAGGCTCTTACAGTAACAGGCTTAAAGGACAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649473.1
CDS-3UTR CAA 90 bp AGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCGGATCTCCTCGGCTTaGAGTTTCTCCTCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: RSGFLSEAGAILIQPLPLRISSA*SFSSSR
Trigger: GCGCGAGGAGGAGAAACTCAAAGCCGAGGAGATCCG...CAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000650269.1
CDS-3UTR CAA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAAACATGCAGAAGGCCTaGCCCGCATCGGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLNMQKA*PASVPG
Trigger: ACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGTT...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATAAGCCGTGTTCGGCTTaGGCAGTGAGACCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDKPCSA*AVRPSI
Trigger: GATGCTGGGTCTCACTGCCAAAGCCGAACACGGCTT...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACTCTGTCTCCGTGGTCTaGGTCTCACATCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHSVSVV*VSHLSR
Trigger: CCGGGACAGATGTGAGACCAAGACCACGGAGACAGA...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCAAAAACCTTGTGGGTTTaGTCTTCCCGTTTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSKTLWV*SSRFVW
Trigger: CCAAACAAAACGGGAAGACAAAACCCACAAGGTTTT...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGAGAGTTGCAGACGGGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGCTGCGTGGACAAATCTaGATCAAAACGAAAGGTTAC +
Preference number: 5 (lower is better)
Translates to: RELQTGKPHGTQALSLFMLRGQI*IKTKGY
Trigger: GTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAG...CATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCCCGTCTGCAACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGCACTGCCCAGTGCTaGCTGCTCCTGTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: CIYYKHHIHYLSRCFDSQGTAQC*LLLWPG
Trigger: CCCCGGCCACAGGAGCAGCAAGCACTGGGCAGTGCC...CTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ACATCACAAGTATGCTCCCATAGTCTGGTGCCATCCCTGTACCGGCCTTATGAGGTGATAAGTGGCCATTaGGGCAAGATGCCAGACATC +
Preference number: 5 (lower is better)
Translates to: TSQVCSHSLVPSLYRPYEVISGH*GKMPDI
Trigger: GATGTCTGGCATCTTGCCCAAATGGCCACTTATCAC...CTCATAAGGCCGGTACAGGGATGGCACCAGACTATGGGAGCATACTTGTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TCTCAGGTGGACTTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTCCTCCACCAGAAGTGTaGCCACAAGAAAACAGTGTG +
Preference number: 5 (lower is better)
Translates to: SQVDLAGLESQLRLDWFLPPPEV*PQENSV
Trigger: CACACTGTTTTCTTGTGGCAACACTTCTGGTGGAGG...AAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAAGTCCACCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTATCTCAGTAGGTGCTTaGACTCACAGGGAGATGTTA +
Preference number: 5 (lower is better)
Translates to: GKPHGTQALSLFMNAILGISVGA*THREML
Trigger: TAACATCTCCCTGTGAGTCAAAGCACCTACTGAGAT...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAAATGTTGTACTTCCCCTaGATCCGGATCTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQMLYFP*IRISSA
Trigger: AGCCGAGGAGATCCGGATCAAGGGGAAGTACAACAT...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR CAA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACTCCTCGCTGCTGATGTaGTACTTCCCCTTGATCCGG +
Preference number: 5 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHSSLLM*YFPLIR
Trigger: CCGGATCAAGGGGAAGTACAACATCAGCAGCGAGGA...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR CAA 90 bp AGTGGACTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTGGCTCTCAGGTGGACTaGGCAGGATTAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: SGLELLRRFPQLSSDRPSGSQVD*AGLESQ
Trigger: CTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC...AGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAGTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGAGTGAGGCTGACTCATTaGAGTTGCGAGGCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRVRLTH*SCEAVD
Trigger: GTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCAC...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGGTGGGCCTGTATTTCCCTTaGGCCTGCTCTGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AMMTSFLLIDLDWFPGMVGLYFP*ACSVWL
Trigger: CAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCC...CACCATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAACCCCACGGCACGCAGGCTCTGAGTCTGTTTATGAACGCGATTCTTGGTAAAACCTTGTGGGTTTaGTCTTCCCGTTTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: GKPHGTQALSLFMNAILGKTLWV*SSRFVW
Trigger: CCAAACAAAACGGGAAGACAAAACCCACAAGGTTTT...ACCAAGAATCGCGTTCATAAACAGACTCAGAGCCTGCGTGCCGTGGGGTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCACATCTGTCCCGGGAAGATAAATCAAAAACCTaGTGGGTTTTGTCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: GYPLSSVSVVLVSHLSREDKSKT*WVLSSR
Trigger: ACGGGAAGACAAAACCCACAAGGTTTTTGATTTATC...TTCCCGGGACAGATGTGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GTGCAGCTTTGGGGTGGGTATCCTCTCAGCTCTGTCTCCGTGGTCTTGGTCTCATTGCATGGTAAATTGTaGGAACTGGAGGTGACAAAA +
Preference number: 5 (lower is better)
Translates to: VQLWGGYPLSSVSVVLVSLHGKL*ELEVTK
Trigger: TTTTGTCACCTCCAGTTCCAACAATTTACCATGCAA...TGAGACCAAGACCACGGAGACAGAGCTGAGAGGATACCCACCCCAAAGCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTCTTTCTAGGGAGCAAAGCCTCCTTTCTGGGAGATCTCGTTGGGGCCTTGAGACAGTTGCATGGTAAATaGTTGGAACTGGAGGTGACA +
Preference number: 5 (lower is better)
Translates to: LFLGSKASFLGDLVGALRQLHGK*LELEVT
Trigger: TGTCACCTCCAGTTCCAACAATTTACCATGCAACTG...TCTCAAGGCCCCAACGAGATCTCCCAGAAAGGAGGCTTTGCTCCCTAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATGGGGCCATAGAAGGTTaGCTCCCTGGTGCGGTCGCT +
Preference number: 5 (lower is better)
Translates to: NHSHILIPILTQAFQHYNGAIEG*LPGAVA
Trigger: AGCGACCGCACCAGGGAGCAAACCTTCTATGGCCCC...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCAGCTTCCAGCCCTGTaGTATGGGGCACACTCCACC +
Preference number: 5 (lower is better)
Translates to: KARSGFLSEAGAILIQPLQLPAL*YGAHST
Trigger: GGTGGAGTGTGCCCCATACAACAGGGCTGGAAGCTG...CAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TGTAGGGGAATGAGTAGAGCATTCGCCCAGCACAGCAGAGGTCCACTTGAGAAGATCTCAGTAGGTGCTTaGACTCACAGGGAGATGTTA +
Preference number: 5 (lower is better)
Translates to: CRGMSRAFAQHSRGPLEKISVGA*THREML
Trigger: TAACATCTCCCTGTGAGTCAAAGCACCTACTGAGAT...CTTCTCAAGTGGACCTCTGCTGTGCTGGGCGAATGCTCTACTCATTCCCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATGTGGGGAGGAAAAGTTaGCGAAGTGGCGGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDVGRKS*RSGGVS
Trigger: AGAGACACCGCCACTTCGCAAACTTTTCCTCCCCAC...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS-3UTR CAA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACATAGACACGTCAGTGTaGCGCATGCCACAGCACTTC +
Preference number: 5 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHIDTSV*RMPQHF
Trigger: GAAGTGCTGTGGCATGCGCAACACTGACGTGTCTAT...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTATAGACACGTCAGTGTaGCGCATGCCACAGCACTTC +
Preference number: 5 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSIDTSV*RMPQHF
Trigger: GAAGTGCTGTGGCATGCGCAACACTGACGTGTCTAT...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp GCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCAACAGCAGAGGTCCACTaGAGAAGGCAGAAATCCCGA +
Preference number: 5 (lower is better)
Translates to: ARSGFLSEAGAILIQPLPTAEVH*RRQKSR
Trigger: TCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT...TGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGAACAGCAGAGGTCCACTaGAGAAGGCAGAAATCCCGA +
Preference number: 5 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRTAEVH*RRQKSR
Trigger: TCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CTTGAACTTCTCAGACGATTTCCCCAACTGAGTAGTGACAGACCTTCTAGCTCTACAGCAGAGGTCCACTaGAGAAGGCAGAAATCCCGA +
Preference number: 5 (lower is better)
Translates to: LELLRRFPQLSSDRPSSSTAEVH*RRQKSR
Trigger: TCGGGATTTCTGCCTTCTCAAGTGGACCTCTGCTGT...AGAGCTAGAAGGTCTGTCACTACTCAGTTGGGGAAATCGTCTGAGAAGTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACAGTGAGGCTGACTCATTaGAGTTGCGAGGCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: GRSLRGQILIKTKGYLATVRLTH*SCEAVD
Trigger: GTCCACTGCCTCGCAACTCAAATGAGTCAGCCTCAC...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAGGAAGGAGGAGATCCATGCTTCATGCTCAGATGTGAGTTTCAGAGGAGGCAGTTGCATGGTAAATaGTTGGAACTGGAGGTGACA +
Preference number: 5 (lower is better)
Translates to: GKEGGDPCFMLRCEFQRRQLHGK*LELEVT
Trigger: TGTCACCTCCAGTTCCAACAATTTACCATGCAACTG...CCTCCTCTGAAACTCACATCTGAGCATGAAGCATGGATCTCCTCCTTCCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGACCTCCACCAGAAGTGTaGCCACAAGAAAACAGTGTG +
Preference number: 5 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRPPPEV*PQENSV
Trigger: CACACTGTTTTCTTGTGGCAACACTTCTGGTGGAGG...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ACGGTGATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTGGGGTCATCCCCTATaGAGAGTAGGGAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: TVISGHLGKMPDISVPLFWGHPL*RVGRNF
Trigger: GAAATTCCTCCCTACTCTCAATAGGGGATGACCCCA...GAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTATCACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGGGATGTCCTCGCTGCTGATGTaGTACTTCCCCTTGATCCGG +
Preference number: 5 (lower is better)
Translates to: SAMMTSFLLIDLDWFPGMSSLLM*YFPLIR
Trigger: CCGGATCAAGGGGAAGTACAACATCAGCAGCGAGGA...CATCCCTGGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000649473.1
CDS-3UTR CAA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATAACATGCAGAAGGCCTaGCCCGCATCGGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDNMQKA*PASVPG
Trigger: ACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGTT...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTAATAGACACGTCAGTGTaGCGCATGCCACAGCACTTC +
Preference number: 5 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLIDTSV*RMPQHF
Trigger: GAAGTGCTGTGGCATGCGCAACACTGACGTGTCTAT...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTGGCAGGATTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCAGCTCTAGACACATTTaGAAAAGCGAGATCTGGATT +
Preference number: 5 (lower is better)
Translates to: LAGLESQLRLDWFLTATSSSRHI*KSEIWI
Trigger: AATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGCT...GCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAATCCTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp AAAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTCCGGCCTTTAAGAGGTaGTCTGGGCTATGCCAGCGA +
Preference number: 5 (lower is better)
Translates to: KSEIWIFIRSWCHSNSTSPAFKR*SGLCQR
Trigger: TCGCTGGCATAGCCCAGACAACCTCTTAAAGGCCGG...AGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGGCCTGTATTTCCCTTaGGCCTGCTCTGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFGLYFP*ACSVWL
Trigger: CAGCCAGACAGAGCAGGCCAAAGGGAAATACAGGCC...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATTCTGTCTCCGTGGTCTaGGTCTCACATCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: NHSHILIPILTQAFQHYNSVSVV*VSHLSR
Trigger: CCGGGACAGATGTGAGACCAAGACCACGGAGACAGA...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGTAGGAGTCTGCGTGGACAAATCTTGATCAAAACGAAAGGTTACTTAGCCACACAGTGTTTCAGCCCATaGGCCCAAATGCTTGGGACT +
Preference number: 5 (lower is better)
Translates to: GRSLRGQILIKTKGYLATQCFSP*AQMLGT
Trigger: AGTCCCAAGCATTTGGGCCAATGGGCTGAAACACTG...TGTGGCTAAGTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAGACTCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCTCCTCGCTGCTGATGTaGTACTTCCCCTTGATCCGG +
Preference number: 5 (lower is better)
Translates to: NHQCYDDQFSSHRSGLVSSSLLM*YFPLIR
Trigger: CCGGATCAAGGGGAAGTACAACATCAGCAGCGAGGA...GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000649473.1
CDS-3UTR CAA 90 bp AAAAGCGAGATCTGGATTTTTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGGCTCTCAGGTGGACTaGGCAGGATTAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: KSEIWIFIRSWCHSNSTSGSQVD*AGLESQ
Trigger: CTGTGACTCTAATCCTGCCAAGTCCACCTGAGAGCC...AGAGGTTGAATTAGAATGGCACCAGCTTCGGATAAAAATCCAGATCTCGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATAGCGAGCCAGGCACCTaGAGCTCCATCCAAACCGTT +
Preference number: 5 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDSEPGT*SSIQTV
Trigger: AACGGTTTGGATGGAGCTCAAGGTGCCTGGCTCGCT...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTAGAGTCACAGCTGAGGCTTGACTGGTTCCTTACAGCCACCAGCTCTAGACACGATAAATCAAAAACCTaGTGGGTTTTGTCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: LESQLRLDWFLTATSSRHDKSKT*WVLSSR
Trigger: ACGGGAAGACAAAACCCACAAGGTTTTTGATTTATC...GTGTCTAGAGCTGGTGGCTGTAAGGAACCAGTCAAGCCTCAGCTGTGACTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATATGTTGTACTTCCCCTaGATCCGGATCTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: NHSHILIPILTQAFQHYNMLYFP*IRISSA
Trigger: AGCCGAGGAGATCCGGATCAAGGGGAAGTACAACAT...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520439.3
ENST00000648164.1
ENST00000649473.1
CDS-3UTR CAA 90 bp TACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATGTTATAGACACGTCAGTGTaGCGCATGCCACAGCACTTC +
Preference number: 5 (lower is better)
Translates to: YKHHIHYLSRCFDSQGDVIDTSV*RMPQHF
Trigger: GAAGTGCTGTGGCATGCGCAACACTGACGTGTCTAT...AACATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCC +
Preference number: 5 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDPRTPL*NVQLVP
Trigger: GGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGG...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GCCTGGCATGTAGCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTGGACCATCCCCACAGTaGTGTAGGGGAATGAGTAGA +
Preference number: 5 (lower is better)
Translates to: AWHVAAFITSITYIISVGGPSPQ*CRGMSR
Trigger: TCTACTCATTCCCCTACACAACTGTGGGGATGGTCC...ACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGCTACATGCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATACTAAGGGTAGGCGATaGAAGGCTGAGCGTGATGTG +
Preference number: 5 (lower is better)
Translates to: NHSHILIPILTQAFQHYNTKGRR*KAERDV
Trigger: CACATCACGCTCAGCCTTCAATCGCCTACCCTTAGT...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ATAAGTGGCCATTTGGGCAAGATGCCAGACATCTCAGTGCCTTTATTCTCGCGAAAAACCTTGTGGGTTTaGTCTTCCCGTTTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: ISGHLGKMPDISVPLFSRKTLWV*SSRFVW
Trigger: CCAAACAAAACGGGAAGACAAAACCCACAAGGTTTT...TCGCGAGAATAAAGGCACTGAGATGTCTGGCATCTTGCCCAAATGGCCACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GAGGCGTGCATTGAGTTACCCTGTTTCCACTTCAGCAAGTTAAGACGTGCCTCAGATAAATCAAAAACCTaGTGGGTTTTGTCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: EACIELPCFHFSKLRRASDKSKT*WVLSSR
Trigger: ACGGGAAGACAAAACCCACAAGGTTTTTGATTTATC...TGAGGCACGTCTTAACTTGCTGAAGTGGAAACAGGGTAACTCAATGCACGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATCAGTTGCATGGTAAATaGTTGGAACTGGAGGTGACA +
Preference number: 5 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDQLHGK*LELEVT
Trigger: TGTCACCTCCAGTTCCAACAATTTACCATGCAACTG...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATATGTTGTACTTCCCCTaGATCCGGATCTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDMLYFP*IRISSA
Trigger: AGCCGAGGAGATCCGGATCAAGGGGAAGTACAACAT...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522317.5
ENST00000649473.1
CDS-3UTR CAA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATGGACCATCCCCACAGTaGTGTAGGGGAATGAGTAGA +
Preference number: 5 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDGPSPQ*CRGMSR
Trigger: TCTACTCATTCCCCTACACAACTGTGGGGATGGTCC...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATTGCGAGGCAGTGGACTaGAACTTCTCAGACGATTTC +
Preference number: 5 (lower is better)
Translates to: NHSHILIPILTQAFQHYNCEAVD*NFSDDF
Trigger: GAAATCGTCTGAGAAGTTCAAGTCCACTGCCTCGCA...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CCTAATACTTCCCGTTTTGTCACGACACACGTGCACACAGAAGCACACACACAAGATAAATCAAAAACCTaGTGGGTTTTGTCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: PNTSRFVTTHVHTEAHTQDKSKT*WVLSSR
Trigger: ACGGGAAGACAAAACCCACAAGGTTTTTGATTTATC...TTGTGTGTGTGCTTCTGTGTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AAGGAACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTACAGTTGCATGGTAAATaGTTGGAACTGGAGGTGACA +
Preference number: 5 (lower is better)
Translates to: KEPQPHTNTHSHPSIPTLQLHGK*LELEVT
Trigger: TGTCACCTCCAGTTCCAACAATTTACCATGCAACTG...TAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TTATCCGAAGCTGGTGCCATTCTAATTCAACCTCTGCCACTGCTGGTTAAGAGAAGCTCTAGACACATTTaGAAAAGCGAGATCTGGATT +
Preference number: 5 (lower is better)
Translates to: LSEAGAILIQPLPLLVKRSSRHI*KSEIWI
Trigger: AATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGCT...TCTCTTAACCAGCAGTGGCAGAGGTTGAATTAGAATGGCACCAGCTTCGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS-3UTR CAA 90 bp TCCTTAGGAAAAGAGAAAGGAGTTAGGTCAGAGACACCACTAAGGGTAGGCGATGATAAATCAAAAACCTaGTGGGTTTTGTCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: SLGKEKGVRSETPLRVGDDKSKT*WVLSSR
Trigger: ACGGGAAGACAAAACCCACAAGGTTTTTGATTTATC...ATCGCCTACCCTTAGTGGTGTCTCTGACCTAACTCCTTTCTCTTTTCCTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTGTCACGACACACGTGCACTTGCATGGTAAATTGTaGGAACTGGAGGTGACAAAA +
Preference number: 5 (lower is better)
Translates to: GKENGIPNTSRFVTTHVHLHGKL*ELEVTK
Trigger: TTTTGTCACCTCCAGTTCCAACAATTTACCATGCAA...GTGCACGTGTGTCGTGACAAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp GCCTGGCATGTAGCTGCATTTATTACAAGCATCACATACATTATCTCAGTAGGTTCTCATAGATCTGGATaGGTTTCCAGGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: AWHVAAFITSITYIISVGSHRSG*VSRDGA
Trigger: TGCACCATCCCTGGAAACCAATCCAGATCTATGAGA...ACCTACTGAGATAATGTATGTGATGCTTGTAATAAATGCAGCTACATGCCAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AACCACAGCCACATACTAATACCCATTCTCACCCAAGCATTCCAACACTATAATAAAACCTTGTGGGTTTaGTCTTCCCGTTTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: NHSHILIPILTQAFQHYNKTLWV*SSRFVW
Trigger: CCAAACAAAACGGGAAGACAAAACCCACAAGGTTTT...ATTATAGTGTTGGAATGCTTGGGTGAGAATGGGTATTAGTATGTGGCTGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp CAGGCTATGATGTGTGATGGGAAAGAAAACGGAATACCTAATACTTCCCGTTTTAAAACCTTGTGGGTTTaGTCTTCCCGTTTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: QAMMCDGKENGIPNTSRFKTLWV*SSRFVW
Trigger: CCAAACAAAACGGGAAGACAAAACCCACAAGGTTTT...AAAACGGGAAGTATTAGGTATTCCGTTTTCTTTCCCATCACACATCATAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000520439.3
ENST00000647605.1
ENST00000648164.1
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp ACTCACAGGGAGATGTTAATAATAATTCCTCAAAAGCGCCCTGTTTACACGAGACTGCGTGGACAAATCTaGATCAAAACGAAAGGTTAC +
Preference number: 5 (lower is better)
Translates to: THREMLIIIPQKRPVYTRLRGQI*IKTKGY
Trigger: GTAACCTTTCGTTTTGATCAAGATTTGTCCACGCAG...TCTCGTGTAAACAGGGCGCTTTTGAGGAATTATTATTAACATCTCCCTGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATGGTGGCATTCAGGTGTaGTCTCCTTTAAGAAATCCT +
Preference number: 5 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDGGIQV*SPLRNP
Trigger: AGGATTTCTTAAAGGAGACAACACCTGAATGCCACC...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp AATCACCAGTGCTATGATGACCAGTTTTCTTCTCATAGATCTGGATTGGTTTCCAGCTCTAGACACATTTaGAAAAGCGAGATCTGGATT +
Preference number: 5 (lower is better)
Translates to: NHQCYDDQFSSHRSGLVSSSRHI*KSEIWI
Trigger: AATCCAGATCTCGCTTTTCAAAATGTGTCTAGAGCT...GGAAACCAATCCAGATCTATGAGAAGAAAACTGGTCATCATAGCACTGGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522317.5
ENST00000649473.1
ENST00000649696.1
CDS-3UTR CAA 90 bp TATTACAAGCATCACATACATTATCTCAGTAGGTGCTTTGACTCACAGGGAGATTTGCATGGTAAATTGTaGGAACTGGAGGTGACAAAA +
Preference number: 5 (lower is better)
Translates to: YYKHHIHYLSRCFDSQGDLHGKL*ELEVTK
Trigger: TTTTGTCACCTCCAGTTCCAACAATTTACCATGCAA...ATCTCCCTGTGAGTCAAAGCACCTACTGAGATAATGTATGTGATGCTTGTAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649473.1
ENST00000649696.1
CDS CCA 72 bp GCGGGGCCCGGTACCCCTGTGGGTCCAGCTCGCGGGTaGCGGTGCCCAGCAAGGAGCCTGCAGGTCCGCGCG +
Preference number: 6 (lower is better)
Translates to: AGPGTPVGPARG*RCPARSLQVRA
Trigger: CGCGCGGACCTGCAGGCTCCTTGCTGGGCACCGCCACCCGCGAGCTGGACCCACAGGGGTACCGGGCCCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS GCA 72 bp CCCGGTACCCCTGTGGGTCCAGCTCGCGGGTGGCGGTaGCCAGCAAGGAGCCTGCAGGTCCGCGCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: PGTPVGPARGWR*PARSLQVRAPS
Trigger: GCTGGGCGCGCGGACCTGCAGGCTCCTTGCTGGGCACCGCCACCCGCGAGCTGGACCCACAGGGGTACCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS GCA 72 bp CGGGCTCAGCCGAGAAGGCGGACAGGCACAGGAGGCTaGTCGAGCGCCGGGGCCAGGCGTCCGGGAACCCCG +
Preference number: 6 (lower is better)
Translates to: RAQPRRRTGTGG*SSAGARRPGTP
Trigger: CGGGGTTCCCGGACGCCTGGCCCCGGCGCTCGAGCAGCCTCCTGTGCCTGTCCGCCTTCTCGGCTGAGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648164.1
CDS TCA 72 bp TGGGCCGGCTGGGCCGCGGCTCCTCAGGGATGTGAATaGCCATGCTGTTGCGGTTTCCGGCGAGGGATGCCC +
Preference number: 6 (lower is better)
Translates to: WAGWAAAPQGCE*PCCCGFRRGMP
Trigger: GGGCATCCCTCGCCGGAAACCGCAACAGCATGGTCATTCACATCCCTGAGGAGCCGCGGCCCAGCCGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000523477.2
ENST00000647605.1
ENST00000648164.1
ENST00000648481.1
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS CCA 72 bp ACACAGACTGCAGGTCCGGGACGTCCGCCTTGTACCTaGGCCGGCTGGGCCGCGGCTCCTCAGGGATGTGAA +
Preference number: 6 (lower is better)
Translates to: TQTAGPGRPPCT*AGWAAAPQGCE
Trigger: TTCACATCCCTGAGGAGCCGCGGCCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGACCTGCAGTCTGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000523477.2
ENST00000647605.1
ENST00000648164.1
ENST00000648481.1
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS CCA 72 bp TCCTCGGCTTTGAGTTTCTCCTCCTCGCGCATCTCGTaGTCCGACTCGAGGGCGTCGAACACGGCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: SSALSFSSSRIS*SDSRASNTAAP
Trigger: GGGCGCCGCCGTGTTCGACGCCCTCGAGTCGGACCACGAGATGCGCGAGGAGGAGAAACTCAAAGCCGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000648164.1
ENST00000649473.1
ENST00000650269.1
CDS GCA 72 bp AAGGTGCAGACGATGAGGGACAGAGTCCGCACGTTCTaGCTCTTCATGGCCGCCAGCAAGGAGCCGGCGCGG +
Preference number: 6 (lower is better)
Translates to: KVQTMRDRVRTF*LFMAASKEPAR
Trigger: CCGCGCCGGCTCCTTGCTGGCGGCCATGAAGAGGCAGAACGTGCGGACTCTGTCCCTCATCGTCTGCACCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000520439.3
ENST00000522317.5
ENST00000648164.1
ENST00000650269.1
CDS CCA 72 bp TGCCCTGGTGACCTGCAGCGTTCAGCCCCCTTCATCTaGGGATGGCTCTGCCTGGTCAGAGAGCAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: CPGDLQRSAPFI*GWLCLVREQSC
Trigger: GCAGCTCTGCTCTCTGACCAGGCAGAGCCATCCCCAGATGAAGGGGGCTGAACGCTGCAGGTCACCAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523477.2
CDS CAA 90 bp GAGGCTGCCTCACTTACAGAAGGAGAGAGCTGTCCCCGTCCTCTGTaGGGGCCGCCTGCACGGTCCTCCTCTCTTCAGGACCTGGGCTTA +
Preference number: 6 (lower is better)
Translates to: EAASLTEGESCPRPL*GPPARSSSLQDLGL
Trigger: TAAGCCCAGGTCCTGAAGAGAGGAGGACCGTGCAGGCGGCCCCAACAGAGGACGGGGACAGCTCTCTCCTTCTGTAAGTGAGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523653.1
CDS GCA 72 bp ACACAAGCTGCCAGATCGCTGGGTGCCCTGGTGACCTaGAGCGTTCAGCCCCCTTCATCTGGGGATGGCTCT +
Preference number: 6 (lower is better)
Translates to: TQAARSLGALVT*SVQPPSSGDGS
Trigger: AGAGCCATCCCCAGATGAAGGGGGCTGAACGCTGCAGGTCACCAGGGCACCCAGCGATCTGGCAGCTTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000523477.2
ENST00000647605.1
ENST00000649696.1
CDS GCA 72 bp GACAACCAACACCACACAGGGCCTTCCCCCGAGGCCTaGTGCGAGCGTGAAGACGACGACACACAAAGCAAG +
Preference number: 6 (lower is better)
Translates to: DNQHHTGPSPEA*CEREDDDTQSK
Trigger: CTTGCTTTGTGTGTCGTCGTCTTCACGCTCGCAGCAGGCCTCGGGGGAAGGCCCTGTGTGGTGTTGGTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648481.1
CDS GCA 72 bp GCCCATAACCAGCTCAGCCCAGCTGCTCTCGGTCTGTaGAGCCTCAGTACCTTGTGTCCTGGTCTCCCATCC +
Preference number: 6 (lower is better)
Translates to: AHNQLSPAALGL*SLSTLCPGLPS
Trigger: GGATGGGAGACCAGGACACAAGGTACTGAGGCTGCACAGACCGAGAGCAGCTGGGCTGAGCTGGTTATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648481.1
CDS GCA 72 bp GTGAATGACCATGCTGTTGCGGTTTCCGGCGAGGGATaGCCTCTCTTCAGCATCCCGCCGCTCATCCTCACT +
Preference number: 6 (lower is better)
Translates to: VNDHAVAVSGEG*PLFSIPPLILT
Trigger: AGTGAGGATGAGCGGCGGGATGCTGAAGAGAGGGCATCCCTCGCCGGAAACCGCAACAGCATGGTCATTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000523477.2
ENST00000647605.1
ENST00000648164.1
ENST00000648481.1
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS CAA 72 bp GCTCTGTATGCAGGGTGGTCTCAGCGTCCCTTTAATTaGCTCCAAGGGCCTGCTGCATGCCCCCAGTGGGGA +
Preference number: 6 (lower is better)
Translates to: ALYAGWSQRPFN*LQGPAACPQWG
Trigger: TCCCCACTGGGGGCATGCAGCAGGCCCTTGGAGCAAATTAAAGGGACGCTGAGACCACCCTGCATACAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519923.1
CDS CAA 90 bp TCGCTGCTGATGTTGTACTTCCCCTTGATCCGGATCTCCTCGGCTTaGAGTTTCTCCTCCTCGCGCATCTCGTGGTCCGACTCGAGGGCG +
Preference number: 6 (lower is better)
Translates to: SLLMLYFPLIRISSA*SFSSSRISWSDSRA
Trigger: CGCCCTCGAGTCGGACCACGAGATGCGCGAGGAGGAGAAACTCAAAGCCGAGGAGATCCGGATCAAGGGGAAGTACAACATCAGCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000648164.1
ENST00000649473.1
ENST00000650269.1
CDS CCA 72 bp TGCTCTCGGTCTGTGCAGCCTCAGTACCTTGTGTCCTaGTCTCCCATCCTAGACAACCAACACCACACAGGG +
Preference number: 6 (lower is better)
Translates to: CSRSVQPQYLVS*SPILDNQHHTG
Trigger: CCCTGTGTGGTGTTGGTTGTCTAGGATGGGAGACCAGGACACAAGGTACTGAGGCTGCACAGACCGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648481.1
CDS GCA 72 bp TCCATGGGTTTGTGTCCTCATATGGAAAACACAAGCTaGCAGATCGCTGGGTGCCCTGGTGACCTGCAGCGT +
Preference number: 6 (lower is better)
Translates to: SMGLCPHMENTS*QIAGCPGDLQR
Trigger: ACGCTGCAGGTCACCAGGGCACCCAGCGATCTGGCAGCTTGTGTTTTCCATATGAGGACACAAACCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647605.1
ENST00000649696.1
CDS CAA 72 bp ATGTTGTACTTCCCCTTGATCCGGATCTCCTCGGCTTaGAGTTTCTCCTCCTCGCGCATCTCGTGGTCCGAC +
Preference number: 6 (lower is better)
Translates to: MLYFPLIRISSA*SFSSSRISWSD
Trigger: GTCGGACCACGAGATGCGCGAGGAGGAGAAACTCAAAGCCGAGGAGATCCGGATCAAGGGGAAGTACAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000648164.1
ENST00000649473.1
ENST00000650269.1
CDS CAA 72 bp TTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCCCTGAGGCATTCAAGC +
Preference number: 6 (lower is better)
Translates to: FGSETQHPRTPL*NVQLVPLRHSS
Trigger: GCTTGAATGCCTCAGGGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519923.1
CDS CAA 90 bp GTGTTCGGCTTTGGCAGTGAGACCCAGCATCCACGGACGCCTCTCTaGAATGTGCAGTTAGTTCCCCTGAGGCATTCAAGCAGAAGTATG +
Preference number: 6 (lower is better)
Translates to: VFGFGSETQHPRTPL*NVQLVPLRHSSRSM
Trigger: CATACTTCTGCTTGAATGCCTCAGGGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGGATGCTGGGTCTCACTGCCAAAGCCGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519923.1
CDS CAA 72 bp CCCACAGTCACCATGTTCTCCATAGACACGTCAGTGTaGCGCATGCCACAGCACTTCTTAATGCGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: PTVTMFSIDTSV*RMPQHFLMRFS
Trigger: GCTGAAGCGCATTAAGAAGTGCTGTGGCATGCGCAACACTGACGTGTCTATGGAGAACATGGTGACTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303015.2
ENST00000520439.3
ENST00000522317.5
ENST00000523477.2
ENST00000647605.1
ENST00000648164.1
ENST00000648481.1
ENST00000649473.1
ENST00000649696.1
ENST00000650269.1
CDS CAA 72 bp TGCAGCGTGCCCATAACTGCTGTGACCTCCATGGGTTaGTGTCCTCATATGGAAAACACAAGCTGCCAGATC +
Preference number: 6 (lower is better)
Translates to: CSVPITAVTSMG*CPHMENTSCQI
Trigger: GATCTGGCAGCTTGTGTTTTCCATATGAGGACACAAACCCATGGAGGTCACAGCAGTTATGGGCACGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647605.1
ENST00000649696.1