RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000164626

Ensembl transcript IDs: ENST00000359534.4

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCGACCTGACCGGCAGGCCCACAGCTGGGATGCGGGCGGGCCCTaGTCCTGCTGTGGTACGGAAACACCTGACCCCACGCACAGCGGT +
Preference number: 1 (lower is better)
Translates to: ARPDRQAHSWDAGGP*SCCGTETPDPTHSG
Trigger: ACCGCTGTGCGTGGGGTCAGGTGTTTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATCCCAGCTGTGGGCCTGCCGGTCAGGTCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 90 bp CCTGACCGGCAGGCCCACAGCTGGGATGCGGGCGGGCCCTGCTCCTaGTGTGGTACGGAAACACCTGACCCCACGCACAGCGGTACCTCC +
Preference number: 1 (lower is better)
Translates to: PDRQAHSWDAGGPCS*CGTETPDPTHSGTS
Trigger: GGAGGTACCGCTGTGCGTGGGGTCAGGTGTTTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATCCCAGCTGTGGGCCTGCCGGTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR TCA 90 bp TCCAGCAGCCTCCACCCCACTACGGTTTGTAGTAGGTGCCCGACCTaGCCGGCAGGCCCACAGCTGGGATGCGGGCGGGCCCTGCTCCTG +
Preference number: 1 (lower is better)
Translates to: SSSLHPTTVCSRCPT*PAGPQLGCGRALLL
Trigger: CAGGAGCAGGGCCCGCCCGCATCCCAGCTGTGGGCCTGCCGGTCAGGTCGGGCACCTACTACAAACCGTAGTGGGGTGGAGGCTGCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR TCA 90 bp CTGGGATGCGGGCGGGCCCTGCTCCTGCTGTGGTACGGAAACACCTaGCCCCACGCACAGCGGTACCTCCCCAGACACTTCAGAGCTCCC +
Preference number: 1 (lower is better)
Translates to: LGCGRALLLLWYGNT*PHAQRYLPRHFRAP
Trigger: GGGAGCTCTGAAGTGTCTGGGGAGGTACCGCTGTGCGTGGGGTCAGGTGTTTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CCA 90 bp CTACGGTTTGTAGTAGGTGCCCGACCTGACCGGCAGGCCCACAGCTaGGATGCGGGCGGGCCCTGCTCCTGCTGTGGTACGGAAACACCT +
Preference number: 1 (lower is better)
Translates to: LRFVVGARPDRQAHS*DAGGPCSCCGTETP
Trigger: AGGTGTTTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATCCCAGCTGTGGGCCTGCCGGTCAGGTCGGGCACCTACTACAAACCGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CCA 90 bp TGGGCCAAGAGCAATTTGGCCTCACCCTGCCTGGCCCAAGGGGGCTaGTGGGAGGGGAAGGCGGGCAGTGAGGTCCTTGTTCAGGGCACA +
Preference number: 1 (lower is better)
Translates to: WAKSNLASPCLAQGG*WEGKAGSEVLVQGT
Trigger: TGTGCCCTGAACAAGGACCTCACTGCCCGCCTTCCCCTCCCACCAGCCCCCTTGGGCCAGGCAGGGTGAGGCCAAATTGCTCTTGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 90 bp CTGACCATCACCCATTTGTGGGCCAAGAGCAATTTGGCCTCACCCTaGCTGGCCCAAGGGGGCTGGTGGGAGGGGAAGGCGGGCAGTGAG +
Preference number: 1 (lower is better)
Translates to: LTITHLWAKSNLASP*LAQGGWWEGKAGSE
Trigger: CTCACTGCCCGCCTTCCCCTCCCACCAGCCCCCTTGGGCCAGGCAGGGTGAGGCCAAATTGCTCTTGGCCCACAAATGGGTGATGGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 90 bp GCTCCCTGGCCACCAGCCCTAGCAGTCCCGGCTTCCAGTAACCCATaGTCTGCTACTCTCCCTCCTACCACTTGGGGGCCCACAGAAAGC +
Preference number: 1 (lower is better)
Translates to: APWPPALAVPASSNP*SATLPPTTWGPTES
Trigger: GCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGAGTAGCAGAGCATGGGTTACTGGAAGCCGGGACTGCTAGGGCTGGTGGCCAGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR TCA 90 bp TCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTaGGATACACCAGCCAAGCTCAGGACAGATGCCCCCACAGCCAGG +
Preference number: 1 (lower is better)
Translates to: SVLPTCPASQHVFAL*DTPAKLRTDAPTAR
Trigger: CCTGGCTGTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 90 bp CTCAGGGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTaGATTGTGAGATACACCAGCCAAGCTCAGGACAGATGCCCCCAC +
Preference number: 1 (lower is better)
Translates to: LRVSPAHLSRQPACL*IVRYTSQAQDRCPH
Trigger: GTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 90 bp TCTGATGACTTGCTTCCTGCCCGGCCTCCAGTCACCCGCAGTGGATaGCCCTTCCTGCTTTTGCTCACCTCAGTGTCCCCTTCTCCACCT +
Preference number: 1 (lower is better)
Translates to: SDDLLPARPPVTRSG*PFLLLLTSVSPSPP
Trigger: AGGTGGAGAAGGGGACACTGAGGTGAGCAAAAGCAGGAAGGGGCATCCACTGCGGGTGACTGGAGGCCGGGCAGGAAGCAAGTCATCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 90 bp GGTGAGACAAAGACCCTGCAGGCAAGGCCTCCTCAGGGTCAGTCCTaGCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATA +
Preference number: 1 (lower is better)
Translates to: GETKTLQARPPQGQS*PPVPPASMSLHCEI
Trigger: TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACCCTGAGGAGGCCTTGCCTGCAGGGTCTTTGTCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CCA 90 bp CTTCTCCACCTCTGCTTGGGGACATGGCCCTTGACATCATGGCCTTaGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGCAGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: LLHLCLGTWPLTSWP*MRSPKKAQLSCRAG
Trigger: TCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGATGTCAAGGGCCATGTCCCCAAGCAGAGGTGGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 90 bp ACATCATGGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTaGAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACC +
Preference number: 1 (lower is better)
Translates to: TSWPWMRSPKKAQLS*RAGGQTLDLPILGT
Trigger: GGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 90 bp GGTGAACATCATGGAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTaGCCACCCCTCACCAGAGAGTCCACCAACAGTTTCACATTATCT +
Preference number: 1 (lower is better)
Translates to: GEHHGEPKNSSSSKF*PPLTRESTNSFTLS
Trigger: AGATAATGTGAAACTGTTGGTGGACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTCCATGATGTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 90 bp ATTACATTTGACATCGTTGCCAGTATGTACATACAGTGTGCGCGATaGCAGGACAACCAGCAACAACATGGTTCATTAAAACATTTCACA +
Preference number: 1 (lower is better)
Translates to: ITFDIVASMYIQCAR*QDNQQQHGSLKHFT
Trigger: TGTGAAATGTTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTACATACTGGCAACGATGTCAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCATGGCCCTTGACATCATaGCCTTGGATGAGGTCACCG +
Preference number: 2 (lower is better)
Translates to: APAGWRPLQTAREVGVWAWPLTS*PWMRSP
Trigger: CGGTGACCTCATCCAAGGCCATGATGTCAAGGGCCA...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTCCTCAGGGTCAGTCCTaGCCACCTGTCCCGCCAGCC +
Preference number: 2 (lower is better)
Translates to: LQGRRADTRSPNPWDPALPQGQS*PPVPPA
Trigger: GGCTGGCGGGACAGGTGGGCAGGACTGACCCTGAGG...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CAA 90 bp CCTCAGGGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTaGCATTGTGAGATACACCAGCCAAGCTCAGGACAGATGCCCCCA +
Preference number: 2 (lower is better)
Translates to: PQGQSCPPVPPASMS*HCEIHQPSSGQMPP
Trigger: TGGGGGCATCTGTCCTGAGCTTGGCTGGTGTATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACCCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp AAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTCCAGCGGGCAGGGTGTaGAGTTCTCAGGCGGGCAGG +
Preference number: 2 (lower is better)
Translates to: KGPIELQGRRADTRSPNPPAGRV*SSQAGR
Trigger: CCTGCCCGCCTGAGAACTGCACACCCTGCCCGCTGG...AGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR TCA 90 bp GAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTGCCCACCCCTCACCAGAGAGTGACCAACAAGGAGGATaGGGACCCCAGGCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: ENPRTLVAASSAHPSPESDQQGG*GPQAPG
Trigger: GCCTGGGGCCTGGGGTCCTCATCCTCCTTGTTGGTC...ACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR TCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCATTTAACCACTGGCTCTaGAGCCAACAACAGATTCCA +
Preference number: 2 (lower is better)
Translates to: APAGWRPLQTAREVGVWAFNHWL*SQQQIP
Trigger: TGGAATCTGTTGTTGGCTTCAGAGCCAGTGGTTAAA...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp TCATGGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGCAGGGCAGGAGATGCGGGCGGGCCCTaGTCCTGCTGTGGTACGGAA +
Preference number: 2 (lower is better)
Translates to: SWPWMRSPKKAQLSCRAGDAGGP*SCCGTE
Trigger: TTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATC...TCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp CTCTGCTACTCTCCCTCCTACCACTTGGGGGCCCACAGAAAGCCTTGCGTCTGCGACTGTTTGAGACCCTaGCCTCATCTCCTCACTCCC +
Preference number: 2 (lower is better)
Translates to: LCYSPSYHLGAHRKPCVCDCLRP*PHLLTP
Trigger: GGGAGTGAGGAGATGAGGGCAGGGTCTCAAACAGTC...GCAGACGCAAGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGAGTAGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp GCGTGTGCACACACGCACTGTGCACACACACGTGCACATCAAACACTAGCTAGAGGCGGGCCCTGCTCCTaGTGTGGTACGGAAACACCT +
Preference number: 2 (lower is better)
Translates to: ACAHTHCAHTRAHQTLARGGPCS*CGTETP
Trigger: AGGTGTTTCCGTACCACAGCAGGAGCAGGGCCCGCC...TCTAGCTAGTGTTTGATGTGCACGTGTGTGTGCACAGTGCGTGTGTGCACACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp GAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTGCCCACCCCTCACCAGAGAGTAATTTGGCCTCACCCTaGCTGGCCCAAGGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: ENPRTLVAASSAHPSPESNLASP*LAQGGW
Trigger: CCAGCCCCCTTGGGCCAGGCAGGGTGAGGCCAAATT...ACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CCA 90 bp TCATGGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCCAAGAGCAATTTaGCCTCACCCTGCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: SWPWMRSPKKAQLSCRAGGPRAI*PHPAWP
Trigger: GGGCCAGGCAGGGTGAGGCCAAATTGCTCTTGGCCC...TCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CAA 90 bp CCTTCTCCACCTCTGCTTGGGGACATGGCCCTTGACATCATGGCCTaGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PSPPLLGDMALDIMA*DEVTEKGPIELQGR
Trigger: CCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGATGTCAAGGGCCATGTCCCCAAGCAGAGGTGGAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR TCA 90 bp TCATGGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGCAGGGCAGGAAGAACCAGCCAGAGCTaGGCCTCACTCTTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: SWPWMRSPKKAQLSCRAGRTSQS*ASLLQL
Trigger: GAGCTGCAAGAGTGAGGCTCAGCTCTGGCTGGTTCT...TCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp TTGCCAGTATGTACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGCTGAGCCTCACTCTTaGAGCTCCCTGGCCACCAGC +
Preference number: 2 (lower is better)
Translates to: LPVCTYSVRDARTTSNNMAEPHS*SSLATS
Trigger: GCTGGTGGCCAGGGAGCTGCAAGAGTGAGGCTCAGC...CATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTACATACTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CAA 90 bp GACATCATGGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTaGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: DIMALDEVTEKGPIE*QGRRADTRSPNPWD
Trigger: GTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CCA 90 bp TCATGGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGCAGGGCAGGAAGGGTATGGTTCAGCTaGAGAACAGAGGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: SWPWMRSPKKAQLSCRAGRVWFS*RTEALS
Trigger: GGACAGGGCCTCTGTTCTCCAGCTGAACCATACCCT...TCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR TCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCGTCTGCCACTGCTTaGCCTGAGACAGGGAACACA +
Preference number: 2 (lower is better)
Translates to: PAQILSFLKHTRVHRCACASATA*PETGNT
Trigger: TGTGTTCCCTGTCTCAGGTCAAGCAGTGGCAGACGC...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACGTGAGACAAAGACCCTaGAGGCAAGGCCTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHVRQRP*RQGLLR
Trigger: CCTGAGGAGGCCTTGCCTGCAGGGTCTTTGTCTCAC...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAACAGCAGGATTGGGAGTaGAGGTCCTGGGGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKQQDWE*RSWGQR
Trigger: CCGCTGGCCCCAGGACCTGCACTCCCAATCCTGCTG...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTAGAAGACAGCAGGATTaGGAGTGCAGGTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: PAQILSFLKHTRVHRCACRRQQD*ECRSWG
Trigger: GCCCCAGGACCTGCACTCCCAATCCTGCTGTCTTCT...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR TCA 90 bp AAAAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCTACTCCACCAAATGGTaGGACAAAGACCCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: KKAQLSCRAGGQTLDLPIYSTKW*DKDPAG
Trigger: GCCTGCAGGGTCTTTGTCTCACCATTTGGTGGAGTA...GATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR TCA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACAGTAGGTGCCCGACCTaGCCGGCAGGCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHSRCPT*PAGPQL
Trigger: CAGCTGTGGGCCTGCCGGTCAGGTCGGGCACCTACT...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR TCA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAAGCTCTGGGCTGGGCCTaGGTAGACCAACAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKALGWA*VDQQGG
Trigger: TCCTCCTTGTTGGTCTACTCAGGCCCAGCCCAGAGC...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACGCTTCCAGTAACCCATaGTCTGCTACTCTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHASSNP*SATLPP
Trigger: AGGAGGGAGAGTAGCAGAGCATGGGTTACTGGAAGC...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CCA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTAGAGGCCATCAAAGGTaGGGTGGGGAGCCGGCCCTG +
Preference number: 2 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFRGHQR*GGEPAL
Trigger: CAGGGCCGGCTCCCCACCCCACCTTTGATGGCCTCT...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CCA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTCTCCCTCCTACCACTTaGGGGCCCACAGAAAGCCTT +
Preference number: 2 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFLPPTT*GPTESL
Trigger: AAGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAG...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR TCA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAACATGTCTTTGCATTGTaGGATACACCAGCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKHVFAL*DTPAKL
Trigger: GAGCTTGGCTGGTGTATCTCACAATGCAAAGACATG...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR GCA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACCAGCCAGCATGTCTTTaGATTGTGAGATACACCAGC +
Preference number: 2 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHQPACL*IVRYTS
Trigger: GCTGGTGTATCTCACAATGCAAAGACATGCTGGCTG...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR TCA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACCTAGAGAAAGGAGCTTaGTTCACATATCTGACCATC +
Preference number: 2 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHLEKGA*FTYLTI
Trigger: GATGGTCAGATATGTGAATCAAGCTCCTTTCTCTAG...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CCA 72 bp GTAGTAGGTGCCCGACCTGACCGGCAGGCCCACAGCTaGGATGCGGGCGGGCCCTGCTCCTGCTGTGGTACG +
Preference number: 3 (lower is better)
Translates to: VVGARPDRQAHS*DAGGPCSCCGT
Trigger: CGTACCACAGCAGGAGCAGGGCCCGCCCGCATCCCAGCTGTGGGCCTGCCGGTCAGGTCGGGCACCTACTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 72 bp CAGGCCCACAGCTGGGATGCGGGCGGGCCCTGCTCCTaGTGTGGTACGGAAACACCTGACCCCACGCACAGC +
Preference number: 3 (lower is better)
Translates to: QAHSWDAGGPCS*CGTETPDPTHS
Trigger: GCTGTGCGTGGGGTCAGGTGTTTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATCCCAGCTGTGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR TCA 72 bp GGGCGGGCCCTGCTCCTGCTGTGGTACGGAAACACCTaGCCCCACGCACAGCGGTACCTCCCCAGACACTTC +
Preference number: 3 (lower is better)
Translates to: GRALLLLWYGNT*PHAQRYLPRHF
Trigger: GAAGTGTCTGGGGAGGTACCGCTGTGCGTGGGGTCAGGTGTTTCCGTACCACAGCAGGAGCAGGGCCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 72 bp ACCCATTTGTGGGCCAAGAGCAATTTGGCCTCACCCTaGCTGGCCCAAGGGGGCTGGTGGGAGGGGAAGGCG +
Preference number: 3 (lower is better)
Translates to: THLWAKSNLASP*LAQGGWWEGKA
Trigger: CGCCTTCCCCTCCCACCAGCCCCCTTGGGCCAGGCAGGGTGAGGCCAAATTGCTCTTGGCCCACAAATGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CCA 72 bp AGCAATTTGGCCTCACCCTGCCTGGCCCAAGGGGGCTaGTGGGAGGGGAAGGCGGGCAGTGAGGTCCTTGTT +
Preference number: 3 (lower is better)
Translates to: SNLASPCLAQGG*WEGKAGSEVLV
Trigger: AACAAGGACCTCACTGCCCGCCTTCCCCTCCCACCAGCCCCCTTGGGCCAGGCAGGGTGAGGCCAAATTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CAA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCATGCCCCTTCCTGCTTTaGCTCACCTCAGTGTCCCCT +
Preference number: 3 (lower is better)
Translates to: APAGWRPLQTAREVGVWACPFLL*LTSVSP
Trigger: AGGGGACACTGAGGTGAGCAAAAGCAGGAAGGGGCA...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 72 bp AAGACCCTGCAGGCAAGGCCTCCTCAGGGTCAGTCCTaGCCACCTGTCCCGCCAGCCAGCATGTCTTTGCAT +
Preference number: 3 (lower is better)
Translates to: KTLQARPPQGQS*PPVPPASMSLH
Trigger: ATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACCCTGAGGAGGCCTTGCCTGCAGGGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CCA 72 bp CTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTaGGGGTGTGGGCACGTGCCCATCACTGTCTTCACA +
Preference number: 3 (lower is better)
Translates to: LLGGGLCKRLEK*GCGHVPITVFT
Trigger: TGTGAAGACAGTGATGGGCACGTGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR TCA 72 bp CCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTaGGATACACCAGCCAAGCTCAGGACAGATGCCCCC +
Preference number: 3 (lower is better)
Translates to: PTCPASQHVFAL*DTPAKLRTDAP
Trigger: GGGGGCATCTGTCCTGAGCTTGGCTGGTGTATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 72 bp CGTGTGATACTCCACCAAATGGTGAGACAAAGACCCTaGAGGCAAGGCCTCCTCAGGGTCAGTCCTGCCCAC +
Preference number: 3 (lower is better)
Translates to: RVILHQMVRQRP*RQGLLRVSPAH
Trigger: GTGGGCAGGACTGACCCTGAGGAGGCCTTGCCTGCAGGGTCTTTGTCTCACCATTTGGTGGAGTATCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CCA 72 bp AGTAACCCATGCTCTGCTACTCTCCCTCCTACCACTTaGGGGCCCACAGAAAGCCTTGCGTCTGCCACTGCT +
Preference number: 3 (lower is better)
Translates to: SNPCSATLPPTT*GPTESLASATA
Trigger: AGCAGTGGCAGACGCAAGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGAGTAGCAGAGCATGGGTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 72 bp AGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTaGATTGTGAGATACACCAGCCAAGCTCAGGACAGA +
Preference number: 3 (lower is better)
Translates to: SPAHLSRQPACL*IVRYTSQAQDR
Trigger: TCTGTCCTGAGCTTGGCTGGTGTATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CAA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACCGGGCAGTGAGGTCCTaGTTCAGGGCACAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHRAVRS*FRAQGR
Trigger: CCTTCCCTGTGCCCTGAACAAGGACCTCACTGCCCG...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CAA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTTGGGCCAAGAGCAATTaGGCCTCACCCTGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: PAQILSFLKHTRVHRCACWAKSN*ASPCLA
Trigger: GGCCAGGCAGGGTGAGGCCAAATTGCTCTTGGCCCA...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CCA 72 bp CTCCACCTCTGCTTGGGGACATGGCCCTTGACATCATaGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTG +
Preference number: 3 (lower is better)
Translates to: LHLCLGTWPLTS*PWMRSPKKAQL
Trigger: CAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGATGTCAAGGGCCATGTCCCCAAGCAGAGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CAA 90 bp AAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTGTGAGTCAGGACTGTTaGAGACCCTGCCCTCATCTC +
Preference number: 3 (lower is better)
Translates to: KGPIELQGRRADTRSPNPVSQDC*RPCPHL
Trigger: GAGATGAGGGCAGGGTCTCAAACAGTCCTGACTCAC...AGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 72 bp CCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTaGAGGGCAGGAGGGCAGACACTAGATCTCCCAATC +
Preference number: 3 (lower is better)
Translates to: PWMRSPKKAQLS*RAGGQTLDLPI
Trigger: GATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CCA 72 bp CTCTGCTTGGGGACATGGCCCTTGACATCATGGCCTTaGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGC +
Preference number: 3 (lower is better)
Translates to: LCLGTWPLTSWP*MRSPKKAQLSC
Trigger: GCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGATGTCAAGGGCCATGTCCCCAAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 72 bp CATGGAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTaGCCACCCCTCACCAGAGAGTCCACCAACAGTTTC +
Preference number: 3 (lower is better)
Translates to: HGEPKNSSSSKF*PPLTRESTNSF
Trigger: GAAACTGTTGGTGGACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CAA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAACACTGTCTTCACATGTaGGGGAGGTGGGCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKHCLHM*GRWALA
Trigger: GGCCAGAGCCCACCTCCCCAACATGTGAAGACAGTG...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CAA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTTCTCCCTCCTACCACTaGGGGGCCCACAGAAAGCCT +
Preference number: 3 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFSPSYH*GAHRKP
Trigger: AGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGA...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CAA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAACCAGCCAGCATGTCTTaGCATTGTGAGATACACCAG +
Preference number: 3 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKPASMS*HCEIHQ
Trigger: CTGGTGTATCTCACAATGCAAAGACATGCTGGCTGG...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR GCA 72 bp GACATCGTTGCCAGTATGTACATACAGTGTGCGCGATaGCAGGACAACCAGCAACAACATGGTTCATTAAAA +
Preference number: 3 (lower is better)
Translates to: DIVASMYIQCAR*QDNQQQHGSLK
Trigger: TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTACATACTGGCAACGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CAA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAAGTTTCACATTATCTTTaGCTCCCCAGCCCAAATCCT +
Preference number: 3 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKVSHYL*LPSPNP
Trigger: AGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAAC...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR-3UTR CAA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTGCTAGAGAAAGGAGCTaGATTCACATATCTGACCAT +
Preference number: 3 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFARERS*IHISDH
Trigger: ATGGTCAGATATGTGAATCAAGCTCCTTTCTCTAGC...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCACAGGCCCCTGCTGGGTaGCGGCCTCTGCAAACGGCT +
Preference number: 4 (lower is better)
Translates to: APAGWRPLQTAREVGVWAQAPAG*RPLQTA
Trigger: AGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGCCTG...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GGCAGGCCCACAGCTGGGATGCGGGCGGGCCCTGCTCCTGCTGTGGTACGGAAAACTTGCCCAGGGCACTaGTCCACGTCAGGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: GRPTAGMRAGPAPAVVRKTCPGH*STSGRA
Trigger: CGCTCTGCCTGACGTGGATCAGTGCCCTGGGCAAGT...TTTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATCCCAGCTGTGGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCACAGCAGGATTGGGAGTaGAGGTCCTGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: APAGWRPLQTAREVGVWAQQDWE*RSWGQR
Trigger: CCGCTGGCCCCAGGACCTGCACTCCCAATCCTGCTG...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCAGCCCTGGACCGCGGATaGGTAAGGAGCGGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: APAGWRPLQTAREVGVWAALDRG*VRSGKN
Trigger: GTTCTTCCCGCTCCTTACGCATCCGCGGTCCAGGGC...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCAGTGCTCCCCTTCACCTaGAGGGCCTTCCGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: APAGWRPLQTAREVGVWAVLPFT*RAFREC
Trigger: ACACTCCCGGAAGGCCCTGCAGGTGAAGGGGAGCAC...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCAAATTTGGCCTCACCCTaGCTGGCCCAAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: APAGWRPLQTAREVGVWANLASP*LAQGGW
Trigger: CCAGCCCCCTTGGGCCAGGCAGGGTGAGGCCAAATT...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCAACAGGGCGTGGTAGTTaGCGCTGGGGTTCACACCGG +
Preference number: 4 (lower is better)
Translates to: APAGWRPLQTAREVGVWATGRGS*RWGSHR
Trigger: CCGGTGTGAACCCCAGCGCCAACTACCACGCCCTGT...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CTCTGCTACTCTCCCTCCTACCACTTGGGGGCCCACAGAAAGCCTTGCGTCTGCAGTAGGTGCCCGACCTaGCCGGCAGGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LCYSPSYHLGAHRKPCVCSRCPT*PAGPQL
Trigger: CAGCTGTGGGCCTGCCGGTCAGGTCGGGCACCTACT...GCAGACGCAAGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGAGTAGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CTCTGCTACTCTCCCTCCTACCACTTGGGGGCCCACAGAAAGCCTTGCGTCTGCCCAGCGGGCAGGGTGTaGAGTTCTCAGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCYSPSYHLGAHRKPCVCPAGRV*SSQAGR
Trigger: CCTGCCCGCCTGAGAACTGCACACCCTGCCCGCTGG...GCAGACGCAAGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGAGTAGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTTCACGCGGCCCGGGGTaGGCGAACACCAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LQGRRADTRSPNPWDPALSRGPG*ANTSGA
Trigger: AGCCCCGCTGGTGTTCGCCCACCCCGGGCCGCGTGA...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCAGGCCTCCTTCCAGTGTaGCTCCTCCAGCACTTCGAA +
Preference number: 4 (lower is better)
Translates to: APAGWRPLQTAREVGVWAGLLPV*LLQHFE
Trigger: TTCGAAGTGCTGGAGGAGCCACACTGGAAGGAGGCC...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp ATGCCCCCACAGCCAGGGTATGGTTCAGCTGGAGAACAGAGGCCCTGTCCCGGGTGGCGTCCTGGAAGATaGGTGGGTGGTAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: MPPQPGYGSAGEQRPCPGWRPGR*VGGSPG
Trigger: CCCAGGACTACCACCCACTCATCTTCCAGGACGCCA...CCCGGGACAGGGCCTCTGTTCTCCAGCTGAACCATACCCTGGCTGTGGGGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCAGGGGACCTTGATACGTaGCCTTTGCTCCTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: APAGWRPLQTAREVGVWAGDLDT*PLLLSV
Trigger: GACACTGAGGAGCAAAGGCCACGTATCAAGGTCCCC...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTGTGGGGAGCCGGCCCTaGCTCATGTGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGVGSRP*LMCPWG
Trigger: GCCCCAAGGGCACATGAGGCAGGGCCGGCTCCCCAC...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp ATGCCCCCACAGCCAGGGTATGGTTCAGCTGGAGAACAGAGGCCCTGTCCCGGGCTCCCTCCTACCACTTaGGGGCCCACAGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: MPPQPGYGSAGEQRPCPGLPPTT*GPTESL
Trigger: AAGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAG...CCCGGGACAGGGCCTCTGTTCTCCAGCTGAACCATACCCTGGCTGTGGGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTGGTCCAGCTGGTTCATaGACACCTCGGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LQGRRADTRSPNPWDPALGPAGS*TPRGQG
Trigger: CCCCTGCCCCCGAGGTGTTCATGAACCAGCTGGACC...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp ATGCCCCCACAGCCAGGGTATGGTTCAGCTGGAGAACAGAGGCCCTGTCCCGGGTGCCACTGCTTGACCTaGGACAGGGAACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: MPPQPGYGSAGEQRPCPGCHCLT*DREHSS
Trigger: AGAGCTGTGTTCCCTGTCTCAGGTCAAGCAGTGGCA...CCCGGGACAGGGCCTCTGTTCTCCAGCTGAACCATACCCTGGCTGTGGGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATAGGGGAAGGCGGGCAGTaGGGTCCTTGTTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIGEGGQ*GPCSGH
Trigger: GTGCCCTGAACAAGGACCTCACTGCCCGCCTTCCCC...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GCGTGTGCACACACGCACTGTGCACACACACGTGCACATCAAACACTAGCTAGATGGCCTCACCCTGCCTaGCCCAAGGGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ACAHTHCAHTRAHQTLARWPHPA*PKGAGG
Trigger: CCCACCAGCCCCCTTGGGCCAGGCAGGGTGAGGCCA...TCTAGCTAGTGTTTGATGTGCACGTGTGTGTGCACAGTGCGTGTGTGCACACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp TACACCAGCCAAGCTCAGGACAGATGCCCCCACAGCCAGGGTATGGTTCAGCTGCAGACTCAGTGCTGGTaGAGGTGGACTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YTSQAQDRCPHSQGMVQLQTQCW*RWTRRR
Trigger: CCTCCTCCGAGTCCACCTTCACCAGCACTGAGTCTG...CAGCTGAACCATACCCTGGCTGTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp TACACCAGCCAAGCTCAGGACAGATGCCCCCACAGCCAGGGTATGGTTCAGCTGCTCCCCGGACAGAGTTaGTTGGCCAAGTTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: YTSQAQDRCPHSQGMVQLLPGQS*LAKLAH
Trigger: GTGGGCCAACTTGGCCAAGCAACTCTGTCCGGGGAG...CAGCTGAACCATACCCTGGCTGTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTCGTCCTTGGAGGCTGTaGTCCCCTTCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQGRRADTRSPNPWDPALRPWRL*SPSPAG
Trigger: CCCTGCAGGTGAAGGGGAGCACAGCCTCCAAGGACG...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTGCTGAGCCTCACTCTTaGAGCTCCCTGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LQGRRADTRSPNPWDPALAEPHS*SSLATS
Trigger: GCTGGTGGCCAGGGAGCTGCAAGAGTGAGGCTCAGC...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp ATGCCCCCACAGCCAGGGTATGGTTCAGCTGGAGAACAGAGGCCCTGTCCCGGGGTGGATGCCCCTTCCTaGTTTTGCTCACCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: MPPQPGYGSAGEQRPCPGVDAPS*FCSPQC
Trigger: ACACTGAGGTGAGCAAAAGCAGGAAGGGGCATCCAC...CCCGGGACAGGGCCTCTGTTCTCCAGCTGAACCATACCCTGGCTGTGGGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATAGTTGCTTGGCCAAGTTaGCCCACGGAGTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIVAWPS*PTECGE
Trigger: CTCCCCGCACTCCGTGGGCCAACTTGGCCAAGCAAC...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CAA 72 bp CTCTCCCTCCTACCACTTGGGGGCCCACAGAAAGCCTaGCGTCTGCCACTGCTTGACCTGAGACAGGGAACA +
Preference number: 4 (lower is better)
Translates to: LSLLPLGGPQKA*RLPLLDLRQGT
Trigger: TGTTCCCTGTCTCAGGTCAAGCAGTGGCAGACGCAAGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CAA 72 bp TATCTGACCATCACCCATTTGTGGGCCAAGAGCAATTaGGCCTCACCCTGCCTGGCCCAAGGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: YLTITHLWAKSN*ASPCLAQGGWW
Trigger: CCACCAGCCCCCTTGGGCCAGGCAGGGTGAGGCCAAATTGCTCTTGGCCCACAAATGGGTGATGGTCAGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACGAACACCAGCGGGGCTaGAAGGGCGCCCTGGACCGC +
Preference number: 4 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHEHQRG*KGALDR
Trigger: GCGGTCCAGGGCGCCCTTTCAGCCCCGCTGGTGTTC...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TACACCAGCCAAGCTCAGGACAGATGCCCCCACAGCCAGGGTATGGTTCAGCTGGTCCTGGAAGATGAGTaGGTGGTAGTCCTGGGCGTC +
Preference number: 4 (lower is better)
Translates to: YTSQAQDRCPHSQGMVQLVLEDE*VVVLGV
Trigger: GACGCCCAGGACTACCACCCACTCATCTTCCAGGAC...CAGCTGAACCATACCCTGGCTGTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GCGTGTGCACACACGCACTGTGCACACACACGTGCACATCAAACACTAGCTAGATGTTCAGGGGCGCCTTaGCTTCAGCCCCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ACAHTHCAHTRAHQTLARCSGAP*LQPPAG
Trigger: CCCAGCAGGGGGCTGAAGCCAAGGCGCCCCTGAACA...TCTAGCTAGTGTTTGATGTGCACGTGTGTGTGCACAGTGCGTGTGTGCACACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATAGCGTCTGCCACTGCTTaGCCTGAGACAGGGAACACA +
Preference number: 4 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIASATA*PETGNT
Trigger: TGTGTTCCCTGTCTCAGGTCAAGCAGTGGCAGACGC...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATAAGAACCAGCCAGAGCTaGGCCTCACTCTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIRTSQS*ASLLQL
Trigger: GAGCTGCAAGAGTGAGGCTCAGCTCTGGCTGGTTCT...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATAATTTGGAGCTCCGCATaGGCAGTGCCCGGTACTCAC +
Preference number: 4 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIIWSSA*AVPGTH
Trigger: GTGAGTACCGGGCACTGCGCATGCGGAGCTCCAAAT...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp TTGCCAGTATGTACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGCAGGGAAGGGGGCAGTaGTGGGAGCCCACCGCCTTG +
Preference number: 4 (lower is better)
Translates to: LPVCTYSVRDARTTSNNMQGRGQ*WEPTAL
Trigger: CAAGGCGGTGGGCTCCCAGCACTGCCCCCTTCCCTG...CATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTACATACTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACCCTCAGGGTCAGTCCTaGCCACCTGTCCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHPQGQS*PPVPPA
Trigger: GGCTGGCGGGACAGGTGGGCAGGACTGACCCTGAGG...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTCCCCTTCTCCACCTCTaGTTGGGGACATGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGPLLHL*LGTWPL
Trigger: CAAGGGCCATGTCCCCAAGCAGAGGTGGAGAAGGGG...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTGTCACCCGCAGTGGATaGCCCTTCCTGCTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LQGRRADTRSPNPWDPALVTRSG*PFLLLL
Trigger: GAGCAAAAGCAGGAAGGGGCATCCACTGCGGGTGAC...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGGGCTCTGGCCCCACTaGCCCACAGTAGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PAQILSFLKHTRVHRCACGLWPH*PTVVGQ
Trigger: CTGCCCCACTACTGTGGGGCAGTGGGGCCAGAGCCC...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGGAAGGGGGCAGTGCTaGGAGCCCACCGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PAQILSFLKHTRVHRCACGRGQC*EPTALR
Trigger: CCTCAAGGCGGTGGGCTCCCAGCACTGCCCCCTTCC...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTTGGGCACCCGGTTCTTaGAGTAGACTACCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LQGRRADTRSPNPWDPALWAPGS*SRLPGA
Trigger: TGCCCCTGGTAGTCTACTCCAAGAACCGGGTGCCCA...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp AAAAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCAGAGGCCATCAAAGGTaGGGTGGGGAGCCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KKAQLSCRAGGQTLDLPIRGHQR*GGEPAL
Trigger: CAGGGCCGGCTCCCCACCCCACCTTTGATGGCCTCT...GATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTACTGTCTTCACATGTTaGGGAGGTGGGCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LQGRRADTRSPNPWDPALTVFTC*GGGLWP
Trigger: GGGCCAGAGCCCACCTCCCCAACATGTGAAGACAGT...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CAA 72 bp CAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTaGCATTGTGAGATACACCAGCCAAGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: QSCPPVPPASMS*HCEIHQPSSGQ
Trigger: CTGTCCTGAGCTTGGCTGGTGTATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp TTGCCAGTATGTACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGTTGTCCAGGCCCTCCTaGCCCAGGCACGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: LPVCTYSVRDARTTSNNMLSRPS*PRHGNS
Trigger: GGAGTTCCCGTGCCTGGGTCAGGAGGGCCTGGACAA...CATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTACATACTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTGCCCACCCCTCACCAGAGAGTGCTCGCATTCCTCGCTaGTGCGGTCCAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: ENPRTLVAASSAHPSPESARIPR*CGPAGS
Trigger: TGAACCAGCTGGACCGCATCAGCGAGGAATGCGAGC...ACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp AAAAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCGGAGGTCTCCTCGTCTaGGAGGCCAGCCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: KKAQLSCRAGGQTLDLPIGGLLV*EASLRV
Trigger: AACACGGAGGCTGGCCTCTCAGACGAGGAGACCTCC...GATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp TACACCAGCCAAGCTCAGGACAGATGCCCCCACAGCCAGGGTATGGTTCAGCTGTACTCCACCAAATGGTaGGACAAAGACCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: YTSQAQDRCPHSQGMVQLYSTKW*DKDPAG
Trigger: GCCTGCAGGGTCTTTGTCTCACCATTTGGTGGAGTA...CAGCTGAACCATACCCTGGCTGTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGGACCAACAAGGAGGATaGGGACCCCAGGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPKSFPFLNTHECTGVRVDQQGG*GPQAPG
Trigger: GCCTGGGGCCTGGGGTCCTCATCCTCCTTGTTGGTC...CACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTGAGAGTGAACGGAGCTaGGCGGCTCTGATGACTTGC +
Preference number: 4 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGESERS*AALMTC
Trigger: GCAAGTCATCAGAGCCGCTCAGCTCCGTTCACTCTC...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTGCCCACCCCTCACCAGAGAGTGCAGAAGGCAGAGAGTaGACGGAGCTGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: ENPRTLVAASSAHPSPESAEGRE*TELSGS
Trigger: AGAGCCGCTCAGCTCCGTTCACTCTCTGCCTTCTGC...ACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTGTGAGACAAAGACCCTaGAGGCAAGGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGVRQRP*RQGLLR
Trigger: CCTGAGGAGGCCTTGCCTGCAGGGTCTTTGTCTCAC...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GCGTGTGCACACACGCACTGTGCACACACACGTGCACATCAAACACTAGCTAGACCGGACAGAGTTGCTTaGCCAAGTTGGCCCACGGAG +
Preference number: 4 (lower is better)
Translates to: ACAHTHCAHTRAHQTLARPDRVA*PSWPTE
Trigger: CTCCGTGGGCCAACTTGGCCAAGCAACTCTGTCCGG...TCTAGCTAGTGTTTGATGTGCACGTGTGTGTGCACAGTGCGTGTGTGCACACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTGCCCACCCCTCACCAGAGAGTGACCGGCGGGGGTCTTaGGAGCCACATTGCCATATC +
Preference number: 4 (lower is better)
Translates to: ENPRTLVAASSAHPSPESDRRGS*EPHCHI
Trigger: GATATGGCAATGTGGCTCCCAAGACCCCCGCCGGTC...ACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp CCCCAGACCTCAGAGAACCGTGTGATACTCCACCAAATGGTGAGACAAAGACCCGGCCTTCCGGGAGTGTaGGGAGCTCTCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: PQTSENRVILHQMVRQRPGLPGV*GALKGL
Trigger: GAGTCCTTTGAGAGCTCCCCACACTCCCGGAAGGCC...GGGTCTTTGTCTCACCATTTGGTGGAGTATCACACGGTTCTCTGAGGTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp AAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTGTCCTGGGCGTCCCATaGCTCGCATTCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: KGPIELQGRRADTRSPNPVLGVP*LAFLAD
Trigger: ATCAGCGAGGAATGCGAGCCATGGGACGCCCAGGAC...AGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTTCCAGTCACCCGCAGTaGATGCCCCTTCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LQGRRADTRSPNPWDPALSSHPQ*MPLPAF
Trigger: AAAAGCAGGAAGGGGCATCCACTGCGGGTGACTGGA...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GCGTGTGCACACACGCACTGTGCACACACACGTGCACATCAAACACTAGCTAGAGCTCCTCAGTGTCTGTaGCACCTCTTCCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ACAHTHCAHTRAHQTLARAPQCL*HLFQGG
Trigger: CCCACCTTGGAAGAGGTGTCACAGACACTGAGGAGC...TCTAGCTAGTGTTTGATGTGCACGTGTGTGTGCACAGTGCGTGTGTGCACACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTCTCATCTGGGGACCTTaGTACGTGGCCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGLIWGP*YVAFAP
Trigger: AGGAGCAAAGGCCACGTATCAAGGTCCCCAGATGAG...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTGCCCACCCCTCACCAGAGAGTCCGTGTTCACGAAGGTaGTGCTGGCGTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ENPRTLVAASSAHPSPESPCSRR*CWRPGR
Trigger: TCTTCCAGGACGCCAGCATCACCTTCGTGAACACGG...ACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp AGGAGCTTGATTCACATATCTGACCATCACCCATTTGTGGGCCAAGAGCAATTTAGTTGGCCCACGGAGTaGGGGGAGCTGCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RSLIHISDHHPFVGQEQFSWPTE*GELRGA
Trigger: GGCCCCACGCAGCTCCCCGCACTCCGTGGGCCAACT...AAATTGCTCTTGGCCCACAAATGGGTGATGGTCAGATATGTGAATCAAGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp AATAACAAAAACATTCAGGACACAGTGGGCCAGCCCCAGGGTGAACATCATGGAGATGCGGGCGGGCCCTaGTCCTGCTGTGGTACGGAA +
Preference number: 4 (lower is better)
Translates to: NNKNIQDTVGQPQGEHHGDAGGP*SCCGTE
Trigger: TTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATC...TCCATGATGTTCACCCTGGGGCTGGCCCACTGTGTCCTGAATGTTTTTGTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp AATAACAAAAACATTCAGGACACAGTGGGCCAGCCCCAGGGTGAACATCATGGACTCTGGGCAGACACGTaGGCCGCTTCTCCACGCGTC +
Preference number: 4 (lower is better)
Translates to: NNKNIQDTVGQPQGEHHGLWADT*AASPRV
Trigger: GACGCGTGGAGAAGCGGCCCACGTGTCTGCCCAGAG...TCCATGATGTTCACCCTGGGGCTGGCCCACTGTGTCCTGAATGTTTTTGTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTACTGCCCTAGTCTCTTaGCACGTCCCCCGAAGAACT +
Preference number: 4 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGTALVS*HVPRRT
Trigger: AGTTCTTCGGGGGACGTGCCAAGAGACTAGGGCAGT...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTGCCCACCCCTCACCAGAGAGTCTGATGCGGTCCAGCTaGTTCATGAACACCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ENPRTLVAASSAHPSPESLMRSS*FMNTSG
Trigger: CCCCGAGGTGTTCATGAACCAGCTGGACCGCATCAG...ACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp AAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTAGAAGACAGCAGGATTaGGAGTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KGPIELQGRRADTRSPNPRRQQD*ECRSWG
Trigger: GCCCCAGGACCTGCACTCCCAATCCTGCTGTCTTCT...AGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp GCGTGTGCACACACGCACTGTGCACACACACGTGCACATCAAACACTAGCTAGAACATTCAGGACACAGTaGGCCAGCCCCAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: ACAHTHCAHTRAHQTLARTFRTQ*ASPRVN
Trigger: GTTCACCCTGGGGCTGGCCCACTGTGTCCTGAATGT...TCTAGCTAGTGTTTGATGTGCACGTGTGTGTGCACAGTGCGTGTGTGCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATACCGCCCTCCAGCCTCTaGAAACAGCTGTTTGAATTT +
Preference number: 4 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIPPSSL*KQLFEF
Trigger: AAATTCAAACAGCTGTTTTCAGAGGCTGGAGGGCGG...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTTGGTACGGAAACACCTaGCCCCACGCACAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: PAQILSFLKHTRVHRCACWYGNT*PHAQRY
Trigger: GTACCGCTGTGCGTGGGGTCAGGTGTTTCCGTACCA...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGGCTCTGGGCTGGGCCTaGGTAGACCAACAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QPKSFPFLNTHECTGVRVALGWA*VDQQGG
Trigger: TCCTCCTTGTTGGTCTACTCAGGCCCAGCCCAGAGC...CACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGGGCCAGCCCCAGGGTaGACATCATGGAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: PAQILSFLKHTRVHRCACGPAPG*TSWRTQ
Trigger: TTGGGTTCTCCATGATGTTCACCCTGGGGCTGGCCC...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp TCATGGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGCAGGGCAGGACATCATGGCCTTGGATaGGGTCACCGAAAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SWPWMRSPKKAQLSCRAGHHGLG*GHRKRP
Trigger: GGGCCTTTTTCGGTGACCTCATCCAAGGCCATGATG...TCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp GAGAACCCAAGAACTCTAGTAGCAGCAAGTTCTGCCCACCCCTCACCAGAGAGTACTGTGCACGTGATCTaGGCCTTCCGCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: ENPRTLVAASSAHPSPESTVHVI*AFRRLT
Trigger: TGTGAGTCTGCGGAAGGCGCAGATCACGTGCACAGT...ACTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACTAGAGTTCTTGGGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp TACACCAGCCAAGCTCAGGACAGATGCCCCCACAGCCAGGGTATGGTTCAGCTGCAGCCAGCATGTCTTTaGATTGTGAGATACACCAGC +
Preference number: 4 (lower is better)
Translates to: YTSQAQDRCPHSQGMVQLQPACL*IVRYTS
Trigger: GCTGGTGTATCTCACAATGCAAAGACATGCTGGCTG...CAGCTGAACCATACCCTGGCTGTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTGCTTCCAGTAACCCATaGTCTGCTACTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGASSNP*SATLPP
Trigger: AGGAGGGAGAGTAGCAGAGCATGGGTTACTGGAAGC...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTCTGGGTGGCGGCCTCTaGAAACGGCTAGAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PAQILSFLKHTRVHRCACLGGGL*KRLEKW
Trigger: CCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAG...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp AATAACAAAAACATTCAGGACACAGTGGGCCAGCCCCAGGGTGAACATCATGGAGGTGGGATCACCAGGTaGACTAGGACGCCCCACACG +
Preference number: 4 (lower is better)
Translates to: NNKNIQDTVGQPQGEHHGGGITR*TRTPHT
Trigger: CGTGTGGGGCGTCCTAGTCCACCTGGTGATCCCACC...TCCATGATGTTCACCCTGGGGCTGGCCCACTGTGTCCTGAATGTTTTTGTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TCATGGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGCAGGGCAGGACTCTGCTTGGGGACATaGCCCTTGACATCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SWPWMRSPKKAQLSCRAGLCLGT*PLTSWP
Trigger: AGGCCATGATGTCAAGGGCCATGTCCCCAAGCAGAG...TCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACAAACGGCTAGAGAAGTaGGGGTGTGGGCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHKRLEK*GCGHVP
Trigger: GGGCACGTGCCCACACCCCCACTTCTCTAGCCGTTT...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CAA 72 bp GCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTaGCAGGGCAGGAGGGCAGACACTAGATCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: ALDEVTEKGPIE*QGRRADTRSPN
Trigger: ATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CAA 72 bp CCTCTGCTTGGGGACATGGCCCTTGACATCATGGCCTaGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTG +
Preference number: 4 (lower is better)
Translates to: PLLGDMALDIMA*DEVTEKGPIEL
Trigger: CAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGATGTCAAGGGCCATGTCCCCAAGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCCCACAGAAAGCCTTaGGTCTGCCACTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: PAQILSFLKHTRVHRCACAHRKP*VCHCLT
Trigger: GGTCAAGCAGTGGCAGACGCAAGGCTTTCTGTGGGC...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGGGGGGTGTGGGCACGTaGCCATCACTGTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: QPKSFPFLNTHECTGVRVGGVGT*PSLSSH
Trigger: ATGTGAAGACAGTGATGGGCACGTGCCCACACCCCC...CACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp AATAACAAAAACATTCAGGACACAGTGGGCCAGCCCCAGGGTGAACATCATGGACGTGGTAGTTGGCGCTaGGGTTCACACCGGCCACAA +
Preference number: 4 (lower is better)
Translates to: NNKNIQDTVGQPQGEHHGRGSWR*GSHRPQ
Trigger: TTGTGGCCGGTGTGAACCCCAGCGCCAACTACCACG...TCCATGATGTTCACCCTGGGGCTGGCCCACTGTGTCCTGAATGTTTTTGTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp AATAACAAAAACATTCAGGACACAGTGGGCCAGCCCCAGGGTGAACATCATGGATTTTCAGGCCCCTGCTaGGTGGCGGCCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: NNKNIQDTVGQPQGEHHGFSGPC*VAASAN
Trigger: GTTTGCAGAGGCCGCCACCCAGCAGGGGCCTGAAAA...TCCATGATGTTCACCCTGGGGCTGGCCCACTGTGTCCTGAATGTTTTTGTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATATTTAACCACTGGCTCTaGAGCCAACAACAGATTCCA +
Preference number: 4 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIFNHWL*SQQQIP
Trigger: TGGAATCTGTTGTTGGCTTCAGAGCCAGTGGTTAAA...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp TTGCCAGTATGTACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGAGTAGCAGCAAGTTCTaGCCACCCCTCACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LPVCTYSVRDARTTSNNMSSSKF*PPLTRE
Trigger: CTCTCTGGTGAGGGGTGGGCAGAACTTGCTGCTACT...CATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTACATACTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp AGGAGCTTGATTCACATATCTGACCATCACCCATTTGTGGGCCAAGAGCAATTTGCGGCTCTGATGACTTaGTTCCTGCCCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSLIHISDHHPFVGQEQFAALMT*FLPGLQ
Trigger: CTGGAGGCCGGGCAGGAAGCAAGTCATCAGAGCCGC...AAATTGCTCTTGGCCCACAAATGGGTGATGGTCAGATATGTGAATCAAGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp CAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCCCCGCTTGTCTTCATaGCCTTCTTCCCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: QPKSFPFLNTHECTGVRVPRLSS*PSSRSA
Trigger: AGCAGATCGGGAAGAAGGCCATGAAGACAAGCGGGG...CACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACCCTCTAGCGAGGACTTaGAGGTCTCCTCGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHPLART*RSPRLR
Trigger: TCTCAGACGAGGAGACCTCCAAGTCCTCGCTAGAGG...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TCTTTGCATTGTGAGATACACCAGCCAAGCTCAGGACAGATGCCCCCACAGCCAACCATCACCCATTTGTaGGCCAAGAGCAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: SLHCEIHQPSSGQMPPQPTITHL*AKSNLA
Trigger: GGCCAAATTGCTCTTGGCCCACAAATGGGTGATGGT...TGGCTGTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTATCTCACAATGCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTTGGCCCTTGACATCATaGCCTTGGATGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: PAQILSFLKHTRVHRCACWPLTS*PWMRSP
Trigger: CGGTGACCTCATCCAAGGCCATGATGTCAAGGGCCA...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGACCCCTCAGTCACCATaGATACGAAGGGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: QPKSFPFLNTHECTGVRVTPQSP*IRRVGS
Trigger: TGATCCCACCCTTCGTATTCATGGTGACTGAGGGGT...CACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGTGCTCACCTTCCAGTTaGCAAAAAGGGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QPKSFPFLNTHECTGVRVCSPSS*QKGTAR
Trigger: CCTGGCTGTCCCTTTTTGTCAACTGGAAGGTGAGCA...CACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACTCTCCTAGCCCCAGCTaGTACCAGTCCGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHSPSPS*YQSARP
Trigger: AGGGCGGGCGGACTGGTAGCAGCTGGGGCTAGGAGA...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAAGGCACGGGAACTCCTTaGGCAGATGCAGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKGTGTP*ADAASV
Trigger: CACAGAAGCTGCATCTGCTCAAGGAGTTCCCGTGCC...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAAGGCCACACCCTGTCCTaGAGCATCAGATACCACCTC +
Preference number: 4 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKGHTLS*SIRYHL
Trigger: GAGGTGGTATCTGATGCTGCAGGACAGGGTGTGGCC...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACCTCTTGGTAAGGAACTaGCCTAGTCTCTTGGCACGT +
Preference number: 4 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHLLVRN*PSLLAR
Trigger: ACGTGCCAAGAGACTAGGGCAGTTCCTTACCAAGAG...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTTTAAACACACACGAGTaGACAGGTGTGCGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PAQILSFLKHTRVHRCACLNTHE*TGVRVH
Trigger: GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAA...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATATTTCACATTATCTTTTaGTCCCCAGCCCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIFHIIF*SPAQIL
Trigger: AAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAA...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACCAGTTGTTGAAGGTCTaGTTCCCTGTGATGGCCACA +
Preference number: 4 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHQLLKV*FPVMAT
Trigger: TGTGGCCATCACAGGGAACCAGACCTTCAACAACTG...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACGGGCCAAGAGCAATTTaGCCTCACCCTGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHGPRAI*PHPAWP
Trigger: GGGCCAGGCAGGGTGAGGCCAAATTGCTCTTGGCCC...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTGGCGGGCCCTGCTCCTaGTGTGGTACGGAAACACCT +
Preference number: 4 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFGGPCS*CGTETP
Trigger: AGGTGTTTCCGTACCACAGCAGGAGCAGGGCCCGCC...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAAAAGGCCCAATTGAGTTaGAGGGCAGGAGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKKAQLS*RAGGQT
Trigger: TGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTT...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTTCCTTTTCAGGCCCCTaGTGGGTGGCGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFSFSGP*WVAASA
Trigger: TGCAGAGGCCGCCACCCAGCAGGGGCCTGAAAAGGA...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TTGCCAGTATGTACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGTGTAGTAGTTTTTCTTaGCCTCCTTCCAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LPVCTYSVRDARTTSNNMCSSFS*PPSSVA
Trigger: AGCCACACTGGAAGGAGGCCAAGAAAAACTACTACA...CATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTACATACTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TTGCCAGTATGTACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGTTGACATCATGGCCTTaGATGAGGTCACCGAAAAAG +
Preference number: 4 (lower is better)
Translates to: LPVCTYSVRDARTTSNNMLTSWP*MRSPKK
Trigger: CTTTTTCGGTGACCTCATCCAAGGCCATGATGTCAA...CATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTACATACTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp CAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCTAGAGAAAGGAGCTTaGTTCACATATCTGACCATC +
Preference number: 4 (lower is better)
Translates to: QPKSFPFLNTHECTGVRVLEKGA*FTYLTI
Trigger: GATGGTCAGATATGTGAATCAAGCTCCTTTCTCTAG...CACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp AATAACAAAAACATTCAGGACACAGTGGGCCAGCCCCAGGGTGAACATCATGGAGGTAATGACGGTCGCTaGAAAAATCATTGCATTGGG +
Preference number: 4 (lower is better)
Translates to: NNKNIQDTVGQPQGEHHGGNDGR*KNHCIG
Trigger: CCCAATGCAATGATTTTTGCAGCGACCGTCATTACC...TCCATGATGTTCACCCTGGGGCTGGCCCACTGTGTCCTGAATGTTTTTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp AGGAGCTTGATTCACATATCTGACCATCACCCATTTGTGGGCCAAGAGCAATTTCAATCCTTGGGACCCTaGTCTTTAACCACTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RSLIHISDHHPFVGQEQFQSLGP*SLTTGS
Trigger: AGAGCCAGTGGTTAAAGAGCAGGGTCCCAAGGATTG...AAATTGCTCTTGGCCCACAAATGGGTGATGGTCAGATATGTGAATCAAGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp AAAAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCTTCTTAATGGCTTTGTaGACTTCCACAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: KKAQLSCRAGGQTLDLPIFLMAL*TSTNML
Trigger: GAGCATGTTTGTGGAAGTCCACAAAGCCATTAAGAA...GATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR TCA 90 bp AGGAGCTTGATTCACATATCTGACCATCACCCATTTGTGGGCCAAGAGCAATTTCATGTCTTTGCATTGTaGGATACACCAGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: RSLIHISDHHPFVGQEQFHVFAL*DTPAKL
Trigger: GAGCTTGGCTGGTGTATCTCACAATGCAAAGACATG...AAATTGCTCTTGGCCCACAAATGGGTGATGGTCAGATATGTGAATCAAGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTGACTGTTTGAGACCCTaGCCTCATCTCCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFDCLRP*PHLLTP
Trigger: GGGAGTGAGGAGATGAGGGCAGGGTCTCAAACAGTC...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTAGGGTATGGTTCAGCTaGAGAACAGAGGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFRVWFS*RTEALS
Trigger: GGACAGGGCCTCTGTTCTCCAGCTGAACCATACCCT...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
3UTR CAA 72 bp ACACGTGCACATCAAACACTAGCTAGAGAAAGGAGCTaGATTCACATATCTGACCATCACCCATTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TRAHQTLARERS*IHISDHHPFVG
Trigger: GCCCACAAATGGGTGATGGTCAGATATGTGAATCAAGCTCCTTTCTCTAGCTAGTGTTTGATGTGCACGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACATACAGTGTGCGCGATaGCAGGACAACCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHIQCAR*QDNQQQ
Trigger: TTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTAT...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACTATGTACATACAGTGTaGGCGATGCCAGGACAACCA +
Preference number: 4 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHYVHTV*AMPGQP
Trigger: TGGTTGTCCTGGCATCGCGCACACTGTATGTACATA...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CCA 90 bp TTGCCAGTATGTACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGCAACCAGCAACAACATaGTTCATTAAAACATTTCAC +
Preference number: 4 (lower is better)
Translates to: LPVCTYSVRDARTTSNNMQPATT*FIKTFH
Trigger: GTGAAATGTTTTAATGAACCATGTTGTTGCTGGTTG...CATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTACATACTGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR GCA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTTTGATACGTGGCCTTTaGTCCTCAGTGTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFLIRGL*SSVSVT
Trigger: TGTCACAGACACTGAGGAGCAAAGGCCACGTATCAA...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp GGCAGGCCCACAGCTGGGATGCGGGCGGGCCCTGCTCCTGCTGTGGTACGGAAAGCTCCCCGGACAGAGTaGCTTGGCCAAGTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: GRPTAGMRAGPAPAVVRKAPRTE*LGQVGP
Trigger: TGGGCCAACTTGGCCAAGCAACTCTGTCCGGGGAGC...TTTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATCCCAGCTGTGGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCATGGGCCAAGAGCAATTaGGCCTCACCCTGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: APAGWRPLQTAREVGVWAWAKSN*ASPCLA
Trigger: GGCCAGGCAGGGTGAGGCCAAATTGCTCTTGGCCCA...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp CTTGGAGGCTGTGCTCCCCTTCACCTGCAGGGCCTTCCGGGAGTGTaGGGAGCTCTCAAAGGACTCCTTCCGTCGCCGCCGCCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LGGCAPLHLQGLPGV*GALKGLLPSPPPLL
Trigger: AAGAAGCGGCGGCGGCGACGGAAGGAGTCCTTTGAGAGCTCCCCACACTCCCGGAAGGCCCTGCAGGTGAAGGGGAGCACAGCCTCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp GGCAGGCCCACAGCTGGGATGCGGGCGGGCCCTGCTCCTGCTGTGGTACGGAAAAACTGCCCTAGTCTCTaGGCACGTCCCCCGAAGAAC +
Preference number: 5 (lower is better)
Translates to: GRPTAGMRAGPAPAVVRKNCPSL*ARPPKN
Trigger: GTTCTTCGGGGGACGTGCCAAGAGACTAGGGCAGTT...TTTCCGTACCACAGCAGGAGCAGGGCCCGCCCGCATCCCAGCTGTGGGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp GCCCCTGCTGGGTGGCGGCCTCTGCAAACGGCTAGAGAAGTGGGGGTGTGGGCAGGCCCACAGAAAGCCTaGCGTCTGCCACTGCTTGAC +
Preference number: 5 (lower is better)
Translates to: APAGWRPLQTAREVGVWAGPQKA*RLPLLD
Trigger: GTCAAGCAGTGGCAGACGCAAGGCTTTCTGTGGGCC...TGCCCACACCCCCACTTCTCTAGCCGTTTGCAGAGGCCGCCACCCAGCAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp GCTGGGGGCTCTCCTCCCCTGCCAAGTTGTCCTCTAGCGAGGACTTaGAGGTCTCCTCGTCTGAGAGGCCAGCCTCCGTGTTCACGAAGG +
Preference number: 5 (lower is better)
Translates to: AGGSPPLPSCPLART*RSPRLRGQPPCSRR
Trigger: CCTTCGTGAACACGGAGGCTGGCCTCTCAGACGAGGAGACCTCCAAGTCCTCGCTAGAGGACAACTTGGCAGGGGAGGAGAGCCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 90 bp CCCGTGCCACAGCCTCCTCATCTGGGGACCTTGATACGTGGCCTTTaGTCCTCAGTGTCTGTGACACCTCTTCCAAGGTGGGCACCCGGT +
Preference number: 5 (lower is better)
Translates to: PVPQPPHLGTLIRGL*SSVSVTPLPRWAPG
Trigger: ACCGGGTGCCCACCTTGGAAGAGGTGTCACAGACACTGAGGAGCAAAGGCCACGTATCAAGGTCCCCAGATGAGGAGGCTGTGGCACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp TCCTCAGTGTCTGTGACACCTCTTCCAAGGTGGGCACCCGGTTCTTaGAGTAGACTACCAGGGGCACCAGGGAAGGGGGCAGTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SSVSVTPLPRWAPGS*SRLPGAPGKGAVLG
Trigger: TCCCAGCACTGCCCCCTTCCCTGGTGCCCCTGGTAGTCTACTCCAAGAACCGGGTGCCCACCTTGGAAGAGGTGTCACAGACACTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp TCAGGGGCCCGTGCCACAGCCTCCTCATCTGGGGACCTTGATACGTaGCCTTTGCTCCTCAGTGTCTGTGACACCTCTTCCAAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SGARATASSSGDLDT*PLLLSVCDTSSKVG
Trigger: GCCCACCTTGGAAGAGGTGTCACAGACACTGAGGAGCAAAGGCCACGTATCAAGGTCCCCAGATGAGGAGGCTGTGGCACGGGCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp GCTGGCGTCCTGGAAGATGAGTGGGTGGTAGTCCTGGGCGTCCCATaGCTCGCATTCCTCGCTGATGCGGTCCAGCTGGTTCATGAACAC +
Preference number: 5 (lower is better)
Translates to: AGVLEDEWVVVLGVP*LAFLADAVQLVHEH
Trigger: GTGTTCATGAACCAGCTGGACCGCATCAGCGAGGAATGCGAGCCATGGGACGCCCAGGACTACCACCCACTCATCTTCCAGGACGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATAATGTTCAGGGGCGCCTaGGCTTCAGCCCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIMFRGA*ASAPCW
Trigger: CCAGCAGGGGGCTGAAGCCAAGGCGCCCCTGAACAT...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 90 bp GCCCTAGTCTCTTGGCACGTCCCCCGAAGAACTTGCCCAGGGCACTaGTCCACGTCAGGCAGAGCGGCACCCCGAAGAGACCATAGAAAA +
Preference number: 5 (lower is better)
Translates to: ALVSWHVPRRTCPGH*STSGRAAPRRDHRK
Trigger: TTTTCTATGGTCTCTTCGGGGTGCCGCTCTGCCTGACGTGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCCAAGAGACTAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp AGCCTCCGTGTTCACGAAGGTGATGCTGGCGTCCTGGAAGATGAGTaGGTGGTAGTCCTGGGCGTCCCATGGCTCGCATTCCTCGCTGAT +
Preference number: 5 (lower is better)
Translates to: SLRVHEGDAGVLEDE*VVVLGVPWLAFLAD
Trigger: ATCAGCGAGGAATGCGAGCCATGGGACGCCCAGGACTACCACCCACTCATCTTCCAGGACGCCAGCATCACCTTCGTGAACACGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp ATGCCCCCACAGCCAGGGTATGGTTCAGCTGGAGAACAGAGGCCCTGTCCCGGGTTGGGCCAGTTCCAGTaGTTGAAGGTCTGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: MPPQPGYGSAGEQRPCPGLGQFQ*LKVWFP
Trigger: AGGGAACCAGACCTTCAACAACTGGAACTGGCCCAA...CCCGGGACAGGGCCTCTGTTCTCCAGCTGAACCATACCCTGGCTGTGGGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp TTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTTGGGACCCTGCTCTTCGACCGGCGGGGGTCTaGGGAGCCACATTGCCATAT +
Preference number: 5 (lower is better)
Translates to: LQGRRADTRSPNPWDPALRPAGV*GATLPY
Trigger: ATATGGCAATGTGGCTCCCAAGACCCCCGCCGGTCG...AAGAGCAGGGTCCCAAGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATACGTCCCCCGAAGAACTaGCCCAGGGCACTGATCCAC +
Preference number: 5 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIRPPKN*PRALIH
Trigger: GTGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACG...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp GGTCAGTCCTGCCCACCTGTCCCGCCAGCCAGCATGTCTTTGCATTGTGAGATACGGGCAGTGAGGTCCTaGTTCAGGGCACAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GQSCPPVPPASMSLHCEIRAVRS*FRAQGR
Trigger: CCTTCCCTGTGCCCTGAACAAGGACCTCACTGCCCG...TATCTCACAATGCAAAGACATGCTGGCTGGCGGGACAGGTGGGCAGGACTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 90 bp GTGATCTGCGCCTTCCGCAGACTCACACCTCTCTTGGTAAGGAACTaGCCTAGTCTCTTGGCACGTCCCCCGAAGAACTTGCCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: VICAFRRLTPLLVRN*PSLLARPPKNLPRA
Trigger: TGCCCTGGGCAAGTTCTTCGGGGGACGTGCCAAGAGACTAGGGCAGTTCCTTACCAAGAGAGGTGTGAGTCTGCGGAAGGCGCAGATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 90 bp AAGCTGAAGATGTTGACGTCCTTGGAGGCTGTGCTCCCCTTCACCTaGAGGGCCTTCCGGGAGTGTGGGGAGCTCTCAAAGGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: KLKMLTSLEAVLPFT*RAFRECGELSKDSF
Trigger: GAAGGAGTCCTTTGAGAGCTCCCCACACTCCCGGAAGGCCCTGCAGGTGAAGGGGAGCACAGCCTCCAAGGACGTCAACATCTTCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CTCTGCTACTCTCCCTCCTACCACTTGGGGGCCCACAGAAAGCCTTGCGTCTGCGGCCAGTTCCAGTTGTaGAAGGTCTGGTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: LCYSPSYHLGAHRKPCVCGQFQL*KVWFPV
Trigger: CACAGGGAACCAGACCTTCAACAACTGGAACTGGCC...GCAGACGCAAGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGAGTAGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 90 bp CCTGCAGCATCAGATACCACCTCTAGGATCTTGTCCAGGCCCTCCTaGCCCAGGCACGGGAACTCCTTGAGCAGATGCAGCTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PAASDTTSRILSRPS*PRHGNSLSRCSFCV
Trigger: CACACAGAAGCTGCATCTGCTCAAGGAGTTCCCGTGCCTGGGTCAGGAGGGCCTGGACAAGATCCTAGAGGTGGTATCTGATGCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 90 bp TCATCAGCTGTTCGTAAGGCACAGAGAGCTCAGACTCAGTGCTGGTaGAGGTGGACTCGGAGGAGGAGGGGAACTCGCCCATGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: SSAVRKAQRAQTQCW*RWTRRRRGTRPCSG
Trigger: CCCTGAACATGGGCGAGTTCCCCTCCTCCTCCGAGTCCACCTTCACCAGCACTGAGTCTGAGCTCTCTGTGCCTTACGAACAGCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp TACACCAGCCAAGCTCAGGACAGATGCCCCCACAGCCAGGGTATGGTTCAGCTGGTGAGTCAGGACTGTTaGAGACCCTGCCCTCATCTC +
Preference number: 5 (lower is better)
Translates to: YTSQAQDRCPHSQGMVQLVSQDC*RPCPHL
Trigger: GAGATGAGGGCAGGGTCTCAAACAGTCCTGACTCAC...CAGCTGAACCATACCCTGGCTGTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp AAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCTAGCGGCTCTGATGACTaGCTTCCTGCCCGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: KGPIELQGRRADTRSPNPSGSDD*LPARPP
Trigger: TGGAGGCCGGGCAGGAAGCAAGTCATCAGAGCCGCT...AGGATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 90 bp AGGAGTAGTAGAGGCCCTCGATGTAGTTCCACCCCTCAGTCACCATaGATACGAAGGGTGGGATCACCAGGTGGACTAGGACGCCCCACA +
Preference number: 5 (lower is better)
Translates to: RSSRGPRCSSTPQSP*IRRVGSPGGLGRPT
Trigger: TGTGGGGCGTCCTAGTCCACCTGGTGATCCCACCCTTCGTATTCATGGTGACTGAGGGGTGGAACTACATCGAGGGCCTCTACTACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTTGCCCCTTCCTGCTTTaGCTCACCTCAGTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGCPFLL*LTSVSP
Trigger: AGGGGACACTGAGGTGAGCAAAAGCAGGAAGGGGCA...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp TCATGGCCTTGGATGAGGTCACCGAAAAAGGCCCAATTGAGTTGCAGGGCAGGACACTGTCTTCACATGTaGGGGAGGTGGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: SWPWMRSPKKAQLSCRAGHCLHM*GRWALA
Trigger: GGCCAGAGCCCACCTCCCCAACATGTGAAGACAGTG...TCCTGCCCTGCAACTCAATTGGGCCTTTTTCGGTGACCTCATCCAAGGCCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp ATGCAGCTTCTGTGTGTAGTAGTTTTTCTTGGCCTCCTTCCAGTGTaGCTCCTCCAGCACTTCGAAGATCGCCGCCCCGATGGCCAGGTA +
Preference number: 5 (lower is better)
Translates to: MQLLCVVVFLGLLPV*LLQHFEDRRPDGQV
Trigger: TACCTGGCCATCGGGGCGGCGATCTTCGAAGTGCTGGAGGAGCCACACTGGAAGGAGGCCAAGAAAAACTACTACACACAGAAGCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp TTCCACCCCTCAGTCACCATGAATACGAAGGGTGGGATCACCAGGTaGACTAGGACGCCCCACACGATGAAGATGACTGTGCACGTGATC +
Preference number: 5 (lower is better)
Translates to: FHPSVTMNTKGGITR*TRTPHTMKMTVHVI
Trigger: GATCACGTGCACAGTCATCTTCATCGTGTGGGGCGTCCTAGTCCACCTGGTGATCCCACCCTTCGTATTCATGGTGACTGAGGGGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTCCCGGACAGAGTTGCTaGGCCAAGTTGGCCCACGGA +
Preference number: 5 (lower is better)
Translates to: PAQILSFLKHTRVHRCACPGQSC*AKLAHG
Trigger: TCCGTGGGCCAACTTGGCCAAGCAACTCTGTCCGGG...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 90 bp CTAGGATCTTGTCCAGGCCCTCCTGACCCAGGCACGGGAACTCCTTaGGCAGATGCAGCTTCTGTGTGTAGTAGTTTTTCTTGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LGSCPGPPDPGTGTP*ADAASVCSSFSWPP
Trigger: AGGAGGCCAAGAAAAACTACTACACACAGAAGCTGCATCTGCTCAAGGAGTTCCCGTGCCTGGGTCAGGAGGGCCTGGACAAGATCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CTCTGCTACTCTCCCTCCTACCACTTGGGGGCCCACAGAAAGCCTTGCGTCTGCGCAAAAATCATTGCATaGGGCCAGTTCCAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LCYSPSYHLGAHRKPCVCAKIIA*GQFQLL
Trigger: CAACAACTGGAACTGGCCCAATGCAATGATTTTTGC...GCAGACGCAAGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGAGTAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTCTTGATACGTGGCCTTaGCTCCTCAGTGTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGLDTWP*LLSVCD
Trigger: GTCACAGACACTGAGGAGCAAAGGCCACGTATCAAG...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp AAAAAGGCCCAATTGAGTTGCAGGGCAGGAGGGCAGACACTAGATCTCCCAATCCCTCATCTGGGGACCTaGATACGTGGCCTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: KKAQLSCRAGGQTLDLPIPHLGT*IRGLCS
Trigger: GGAGCAAAGGCCACGTATCAAGGTCCCCAGATGAGG...GATTGGGAGATCTAGTGTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTTCTCCCTCCTACCACTaGGGGGCCCACAGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: PAQILSFLKHTRVHRCACSPSYH*GAHRKP
Trigger: AGGCTTTCTGTGGGCCCCCAAGTGGTAGGAGGGAGA...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CTCCCCAGACACTTCAGAGCTCCCTCTCCAAATGCCGAGCTCAGTAATACCGGTGTCTTGGGAGCCACATaGCCATATCCAATGGTGGTA +
Preference number: 5 (lower is better)
Translates to: LPRHFRAPSPNAELSNTGVLGAT*PYPMVV
Trigger: TACCACCATTGGATATGGCAATGTGGCTCCCAAGAC...ACCGGTATTACTGAGCTCGGCATTTGGAGAGGGAGCTCTGAAGTGTCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACTCCTCCCCTGCCAAGTaGTCCTCTAGCGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHSSPAK*SSSEDL
Trigger: CAAGTCCTCGCTAGAGGACAACTTGGCAGGGGAGGA...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGCACAAAGGCCCAATTGAGTaGCAGGGCAGGAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PKSFPFLNTHECTGVRVHKGPIE*QGRRAD
Trigger: GTCTGCCCTCCTGCCCTGCAACTCAATTGGGCCTTT...GTGCACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp GCTGCAAAAATCATTGCATTGGGCCAGTTCCAGTTGTTGAAGGTCTaGTTCCCTGTGATGGCCACACCCTGTCCTGCAGCATCAGATACC +
Preference number: 5 (lower is better)
Translates to: AAKIIALGQFQLLKV*FPVMATPCPAASDT
Trigger: GGTATCTGATGCTGCAGGACAGGGTGTGGCCATCACAGGGAACCAGACCTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 90 bp TCAAAGGACTCCTTCCGTCGCCGCCGCCGCTTCTTAATGGCTTTGTaGACTTCCACAAACATGCTCACCTTCCAGTTGACAAAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: SKDSFRRRRRFLMAL*TSTNMLTFQLTKRD
Trigger: GTCCCTTTTTGTCAACTGGAAGGTGAGCATGTTTGTGGAAGTCCACAAAGCCATTAAGAAGCGGCGGCGGCGACGGAAGGAGTCCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CCCCAGACCTCAGAGAACCGTGTGATACTCCACCAAATGGTGAGACAAAGACCCCTGACCATCACCCATTaGTGGGCCAAGAGCAATTTG +
Preference number: 5 (lower is better)
Translates to: PQTSENRVILHQMVRQRPLTITH*WAKSNL
Trigger: CAAATTGCTCTTGGCCCACAAATGGGTGATGGTCAG...GGGTCTTTGTCTCACCATTTGGTGGAGTATCACACGGTTCTCTGAGGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp TCTTTGCATTGTGAGATACACCAGCCAAGCTCAGGACAGATGCCCCCACAGCCACTTGACATCATGGCCTaGGATGAGGTCACCGAAAAA +
Preference number: 5 (lower is better)
Translates to: SLHCEIHQPSSGQMPPQPLDIMA*DEVTEK
Trigger: TTTTTCGGTGACCTCATCCAAGGCCATGATGTCAAG...TGGCTGTGGGGGCATCTGTCCTGAGCTTGGCTGGTGTATCTCACAATGCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACAGTTGCTTGGCCAAGTaGGCCCACGGAGTGCGGGGA +
Preference number: 5 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHSCLAK*AHGVRG
Trigger: TCCCCGCACTCCGTGGGCCAACTTGGCCAAGCAACT...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp TACATACAGTGTGCGCGATGCCAGGACAACCAGCAACAACATGGTTCATTAAAATCCTCTAGCGAGGACTaGGAGGTCTCCTCGTCTGAG +
Preference number: 5 (lower is better)
Translates to: YIQCARCQDNQQQHGSLKSSSED*EVSSSE
Trigger: CTCAGACGAGGAGACCTCCAAGTCCTCGCTAGAGGA...TTTTAATGAACCATGTTGTTGCTGGTTGTCCTGGCATCGCGCACACTGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 90 bp CTTGGGAGCCACATTGCCATATCCAATGGTGGTAATGACGGTCGCTaGAAAAATCATTGCATTGGGCCAGTTCCAGTTGTTGAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: LGSHIAISNGGNDGR*KNHCIGPVPVVEGL
Trigger: CAGACCTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCAGCGACCGTCATTACCACCATTGGATATGGCAATGTGGCTCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CCAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTTCGCTGCAAAAATCATaGCATTGGGCCAGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: PAQILSFLKHTRVHRCACSLQKS*HWASSS
Trigger: ACTGGAACTGGCCCAATGCAATGATTTTTGCAGCGA...ACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp AGGAGCTTGATTCACATATCTGACCATCACCCATTTGTGGGCCAAGAGCAATTTAAGATGTTGACGTCCTaGGAGGCTGTGCTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: RSLIHISDHHPFVGQEQFKMLTS*EAVLPF
Trigger: GAAGGGGAGCACAGCCTCCAAGGACGTCAACATCTT...AAATTGCTCTTGGCCCACAAATGGGTGATGGTCAGATATGTGAATCAAGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACCTGCCTCATGTGCCCTaGGGGCTGTTAGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHLPHVP*GLLALL
Trigger: CAACAAGGCTAACAGCCCCAAGGGCACATGAGGCAG...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CAGCCCAAATCCTTTCCTTTCTTAAACACACACGAGTGCACAGGTGTGCGTGTGGTTTCACATTATCTTTaGCTCCCCAGCCCAAATCCT +
Preference number: 5 (lower is better)
Translates to: QPKSFPFLNTHECTGVRVVSHYL*LPSPNP
Trigger: AGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAAC...CACACGCACACCTGTGCACTCGTGTGTGTTTAAGAAAGGAAAGGATTTGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 90 bp ATTGCCATATCCAATGGTGGTAATGACGGTCGCTGCAAAAATCATTaGATTGGGCCAGTTCCAGTTGTTGAAGGTCTGGTTCCCTGTGAT +
Preference number: 5 (lower is better)
Translates to: IAISNGGNDGRCKNH*IGPVPVVEGLVPCD
Trigger: ATCACAGGGAACCAGACCTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCAGCGACCGTCATTACCACCATTGGATATGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp AGGAGCTTGATTCACATATCTGACCATCACCCATTTGTGGGCCAAGAGCAATTTAGACTCACACCTCTCTaGGTAAGGAACTGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: RSLIHISDHHPFVGQEQFRLTPL*VRNCPS
Trigger: ACTAGGGCAGTTCCTTACCAAGAGAGGTGTGAGTCT...AAATTGCTCTTGGCCCACAAATGGGTGATGGTCAGATATGTGAATCAAGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTCTTCTCCACCTCTGCTaGGGGACATGGCCCTTGACA +
Preference number: 5 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFLLHLC*GTWPLT
Trigger: TGTCAAGGGCCATGTCCCCAAGCAGAGGTGGAGAAG...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTATGCTCACCTTCCAGTaGACAAAAAGGGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFMLTFQ*TKRDSQ
Trigger: CTGGCTGTCCCTTTTTGTCAACTGGAAGGTGAGCAT...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTAGAAAGCTGAAGATGTaGACGTCCTTGGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFRKLKM*TSLEAV
Trigger: CACAGCCTCCAAGGACGTCAACATCTTCAGCTTTCT...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACTTGGGGCTGTTAGCCTaGTTGTACTCATTCATCAGC +
Preference number: 5 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHLGLLA*LYSFIS
Trigger: GCTGATGAATGAGTACAACAAGGCTAACAGCCCCAA...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp ACTGGCTCTGAAGCCAACAACAGATTCCAGGTATATAAAAACAGCAGTTTGTTTCCAGCCAGCATGTCTTaGCATTGTGAGATACACCAG +
Preference number: 5 (lower is better)
Translates to: TGSEANNRFQVYKNSSLFPASMS*HCEIHQ
Trigger: CTGGTGTATCTCACAATGCAAAGACATGCTGGCTGG...AAACAAACTGCTGTTTTTATATACCTGGAATCTGTTGTTGGCTTCAGAGCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp CAGTTTCACATTATCTTTTGCTCCCCAGCCCAAATCCTTTCCTTTCTTAAACACGCTAGAGAAAGGAGCTaGATTCACATATCTGACCAT +
Preference number: 5 (lower is better)
Translates to: QFHIIFCSPAQILSFLKHARERS*IHISDH
Trigger: ATGGTCAGATATGTGAATCAAGCTCCTTTCTCTAGC...GTGTTTAAGAAAGGAAAGGATTTGGGCTGGGGAGCAAAAGATAATGTGAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS-3UTR CAA 90 bp AGGAGCTTGATTCACATATCTGACCATCACCCATTTGTGGGCCAAGAGCAATTTTTACATTTGACATCGTaGCCAGTATGTACATACAGT +
Preference number: 5 (lower is better)
Translates to: RSLIHISDHHPFVGQEQFLHLTS*PVCTYS
Trigger: ACTGTATGTACATACTGGCAACGATGTCAAATGTAA...AAATTGCTCTTGGCCCACAAATGGGTGATGGTCAGATATGTGAATCAAGCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 72 bp CTCACGCGGCCCGGGGTGGGCGAACACCAGCGGGGCTaGAAGGGCGCCCTGGACCGCGGATGCGTAAGGAGC +
Preference number: 6 (lower is better)
Translates to: LTRPGVGEHQRG*KGALDRGCVRS
Trigger: GCTCCTTACGCATCCGCGGTCCAGGGCGCCCTTTCAGCCCCGCTGGTGTTCGCCCACCCCGGGCCGCGTGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 72 bp TGTGCTCCCCTTCACCTGCAGGGCCTTCCGGGAGTGTaGGGAGCTCTCAAAGGACTCCTTCCGTCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: CAPLHLQGLPGV*GALKGLLPSPP
Trigger: CGGCGGCGACGGAAGGAGTCCTTTGAGAGCTCCCCACACTCCCGGAAGGCCCTGCAGGTGAAGGGGAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 72 bp TCTTGGCACGTCCCCCGAAGAACTTGCCCAGGGCACTaGTCCACGTCAGGCAGAGCGGCACCCCGAAGAGAC +
Preference number: 6 (lower is better)
Translates to: SWHVPRRTCPGH*STSGRAAPRRD
Trigger: GTCTCTTCGGGGTGCCGCTCTGCCTGACGTGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCCAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 90 bp GCCCGTGCCACAGCCTCCTCATCTGGGGACCTTGATACGTGGCCTTaGCTCCTCAGTGTCTGTGACACCTCTTCCAAGGTGGGCACCCGG +
Preference number: 6 (lower is better)
Translates to: ARATASSSGDLDTWP*LLSVCDTSSKVGTR
Trigger: CCGGGTGCCCACCTTGGAAGAGGTGTCACAGACACTGAGGAGCAAAGGCCACGTATCAAGGTCCCCAGATGAGGAGGCTGTGGCACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 90 bp TGCTGGGGGCTCTCCTCCCCTGCCAAGTTGTCCTCTAGCGAGGACTaGGAGGTCTCCTCGTCTGAGAGGCCAGCCTCCGTGTTCACGAAG +
Preference number: 6 (lower is better)
Translates to: CWGLSSPAKLSSSED*EVSSSERPASVFTK
Trigger: CTTCGTGAACACGGAGGCTGGCCTCTCAGACGAGGAGACCTCCAAGTCCTCGCTAGAGGACAACTTGGCAGGGGAGGAGAGCCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 72 bp AACTGCCCTAGTCTCTTGGCACGTCCCCCGAAGAACTaGCCCAGGGCACTGATCCACGTCAGGCAGAGCGGC +
Preference number: 6 (lower is better)
Translates to: NCPSLLARPPKN*PRALIHVRQSG
Trigger: GCCGCTCTGCCTGACGTGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCCAAGAGACTAGGGCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 90 bp TTGGTAAGGAACTGCCCTAGTCTCTTGGCACGTCCCCCGAAGAACTaGCCCAGGGCACTGATCCACGTCAGGCAGAGCGGCACCCCGAAG +
Preference number: 6 (lower is better)
Translates to: LVRNCPSLLARPPKN*PRALIHVRQSGTPK
Trigger: CTTCGGGGTGCCGCTCTGCCTGACGTGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCCAAGAGACTAGGGCAGTTCCTTACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 72 bp ATGTTGACGTCCTTGGAGGCTGTGCTCCCCTTCACCTaGAGGGCCTTCCGGGAGTGTGGGGAGCTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: MLTSLEAVLPFT*RAFRECGELSK
Trigger: CTTTGAGAGCTCCCCACACTCCCGGAAGGCCCTGCAGGTGAAGGGGAGCACAGCCTCCAAGGACGTCAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 72 bp AGAGCTCCACGAAGTAGCGGTACAGGGCGTGGTAGTTaGCGCTGGGGTTCACACCGGCCACAAAGTCACCGA +
Preference number: 6 (lower is better)
Translates to: RAPRSSGTGRGS*RWGSHRPQSHR
Trigger: TCGGTGACTTTGTGGCCGGTGTGAACCCCAGCGCCAACTACCACGCCCTGTACCGCTACTTCGTGGAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 72 bp TCTGTGACACCTCTTCCAAGGTGGGCACCCGGTTCTTaGAGTAGACTACCAGGGGCACCAGGGAAGGGGGCA +
Preference number: 6 (lower is better)
Translates to: SVTPLPRWAPGS*SRLPGAPGKGA
Trigger: TGCCCCCTTCCCTGGTGCCCCTGGTAGTCTACTCCAAGAACCGGGTGCCCACCTTGGAAGAGGTGTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 72 bp CTGGAAGATGAGTGGGTGGTAGTCCTGGGCGTCCCATaGCTCGCATTCCTCGCTGATGCGGTCCAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: LEDEWVVVLGVP*LAFLADAVQLV
Trigger: AACCAGCTGGACCGCATCAGCGAGGAATGCGAGCCATGGGACGCCCAGGACTACCACCCACTCATCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 72 bp TCTCCTCCCCTGCCAAGTTGTCCTCTAGCGAGGACTTaGAGGTCTCCTCGTCTGAGAGGCCAGCCTCCGTGT +
Preference number: 6 (lower is better)
Translates to: SPPLPSCPLART*RSPRLRGQPPC
Trigger: ACACGGAGGCTGGCCTCTCAGACGAGGAGACCTCCAAGTCCTCGCTAGAGGACAACTTGGCAGGGGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 72 bp CAGGGGCCCGTGCCACAGCCTCCTCATCTGGGGACCTaGATACGTGGCCTTTGCTCCTCAGTGTCTGTGACA +
Preference number: 6 (lower is better)
Translates to: QGPVPQPPHLGT*IRGLCSSVSVT
Trigger: TGTCACAGACACTGAGGAGCAAAGGCCACGTATCAAGGTCCCCAGATGAGGAGGCTGTGGCACGGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 72 bp GTTCGTAAGGCACAGAGAGCTCAGACTCAGTGCTGGTaGAGGTGGACTCGGAGGAGGAGGGGAACTCGCCCA +
Preference number: 6 (lower is better)
Translates to: VRKAQRAQTQCW*RWTRRRRGTRP
Trigger: TGGGCGAGTTCCCCTCCTCCTCCGAGTCCACCTTCACCAGCACTGAGTCTGAGCTCTCTGTGCCTTACGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 72 bp GTTCACGAAGGTGATGCTGGCGTCCTGGAAGATGAGTaGGTGGTAGTCCTGGGCGTCCCATGGCTCGCATTC +
Preference number: 6 (lower is better)
Translates to: VHEGDAGVLEDE*VVVLGVPWLAF
Trigger: GAATGCGAGCCATGGGACGCCCAGGACTACCACCCACTCATCTTCCAGGACGCCAGCATCACCTTCGTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 90 bp AGCTGTCTTCAGGGGCCCGTGCCACAGCCTCCTCATCTGGGGACCTaGATACGTGGCCTTTGCTCCTCAGTGTCTGTGACACCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: SCLQGPVPQPPHLGT*IRGLCSSVSVTPLP
Trigger: TGGAAGAGGTGTCACAGACACTGAGGAGCAAAGGCCACGTATCAAGGTCCCCAGATGAGGAGGCTGTGGCACGGGCCCCTGAAGACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 90 bp TTCCGCAGACTCACACCTCTCTTGGTAAGGAACTGCCCTAGTCTCTaGGCACGTCCCCCGAAGAACTTGCCCAGGGCACTGATCCACGTC +
Preference number: 6 (lower is better)
Translates to: FRRLTPLLVRNCPSL*ARPPKNLPRALIHV
Trigger: GACGTGGATCAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCCAAGAGACTAGGGCAGTTCCTTACCAAGAGAGGTGTGAGTCTGCGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 72 bp CTCACACCTCTCTTGGTAAGGAACTGCCCTAGTCTCTaGGCACGTCCCCCGAAGAACTTGCCCAGGGCACTG +
Preference number: 6 (lower is better)
Translates to: LTPLLVRNCPSL*ARPPKNLPRAL
Trigger: CAGTGCCCTGGGCAAGTTCTTCGGGGGACGTGCCAAGAGACTAGGGCAGTTCCTTACCAAGAGAGGTGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 72 bp CACGTGATCTGCGCCTTCCGCAGACTCACACCTCTCTaGGTAAGGAACTGCCCTAGTCTCTTGGCACGTCCC +
Preference number: 6 (lower is better)
Translates to: HVICAFRRLTPL*VRNCPSLLARP
Trigger: GGGACGTGCCAAGAGACTAGGGCAGTTCCTTACCAAGAGAGGTGTGAGTCTGCGGAAGGCGCAGATCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 72 bp GCCTTCCGCAGACTCACACCTCTCTTGGTAAGGAACTaGCCTAGTCTCTTGGCACGTCCCCCGAAGAACTTG +
Preference number: 6 (lower is better)
Translates to: AFRRLTPLLVRN*PSLLARPPKNL
Trigger: CAAGTTCTTCGGGGGACGTGCCAAGAGACTAGGGCAGTTCCTTACCAAGAGAGGTGTGAGTCTGCGGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 72 bp CAGCCTCCTCATCTGGGGACCTTGATACGTGGCCTTTaGTCCTCAGTGTCTGTGACACCTCTTCCAAGGTGG +
Preference number: 6 (lower is better)
Translates to: QPPHLGTLIRGL*SSVSVTPLPRW
Trigger: CCACCTTGGAAGAGGTGTCACAGACACTGAGGAGCAAAGGCCACGTATCAAGGTCCCCAGATGAGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 72 bp AGAGGCCCTCGATGTAGTTCCACCCCTCAGTCACCATaGATACGAAGGGTGGGATCACCAGGTGGACTAGGA +
Preference number: 6 (lower is better)
Translates to: RGPRCSSTPQSP*IRRVGSPGGLG
Trigger: TCCTAGTCCACCTGGTGATCCCACCCTTCGTATTCATGGTGACTGAGGGGTGGAACTACATCGAGGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 72 bp CTGTGTGTAGTAGTTTTTCTTGGCCTCCTTCCAGTGTaGCTCCTCCAGCACTTCGAAGATCGCCGCCCCGAT +
Preference number: 6 (lower is better)
Translates to: LCVVVFLGLLPV*LLQHFEDRRPD
Trigger: ATCGGGGCGGCGATCTTCGAAGTGCTGGAGGAGCCACACTGGAAGGAGGCCAAGAAAAACTACTACACACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 72 bp ACAGCCTCCTCATCTGGGGACCTTGATACGTGGCCTTaGCTCCTCAGTGTCTGTGACACCTCTTCCAAGGTG +
Preference number: 6 (lower is better)
Translates to: TASSSGDLDTWP*LLSVCDTSSKV
Trigger: CACCTTGGAAGAGGTGTCACAGACACTGAGGAGCAAAGGCCACGTATCAAGGTCCCCAGATGAGGAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 72 bp TGTCCAGGCCCTCCTGACCCAGGCACGGGAACTCCTTaGGCAGATGCAGCTTCTGTGTGTAGTAGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: CPGPPDPGTGTP*ADAASVCSSFS
Trigger: AGAAAAACTACTACACACAGAAGCTGCATCTGCTCAAGGAGTTCCCGTGCCTGGGTCAGGAGGGCCTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 72 bp TCAGTCACCATGAATACGAAGGGTGGGATCACCAGGTaGACTAGGACGCCCCACACGATGAAGATGACTGTG +
Preference number: 6 (lower is better)
Translates to: SVTMNTKGGITR*TRTPHTMKMTV
Trigger: CACAGTCATCTTCATCGTGTGGGGCGTCCTAGTCCACCTGGTGATCCCACCCTTCGTATTCATGGTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CCA 72 bp TCCTTCCGTCGCCGCCGCCGCTTCTTAATGGCTTTGTaGACTTCCACAAACATGCTCACCTTCCAGTTGACA +
Preference number: 6 (lower is better)
Translates to: SFRRRRRFLMAL*TSTNMLTFQLT
Trigger: TGTCAACTGGAAGGTGAGCATGTTTGTGGAAGTCCACAAAGCCATTAAGAAGCGGCGGCGGCGACGGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 90 bp ATGACGGTCGCTGCAAAAATCATTGCATTGGGCCAGTTCCAGTTGTaGAAGGTCTGGTTCCCTGTGATGGCCACACCCTGTCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: MTVAAKIIALGQFQL*KVWFPVMATPCPAA
Trigger: TGCTGCAGGACAGGGTGTGGCCATCACAGGGAACCAGACCTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCAGCGACCGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS TCA 72 bp CTTTGTGGACTTCCACAAACATGCTCACCTTCCAGTTaGCAAAAAGGGACAGCCAGGCCAGCCCCAAGTAGA +
Preference number: 6 (lower is better)
Translates to: LCGLPQTCSPSS*QKGTARPAPSR
Trigger: TCTACTTGGGGCTGGCCTGGCTGTCCCTTTTTGTCAACTGGAAGGTGAGCATGTTTGTGGAAGTCCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 72 bp GCTGCAAAAATCATTGCATTGGGCCAGTTCCAGTTGTaGAAGGTCTGGTTCCCTGTGATGGCCACACCCTGT +
Preference number: 6 (lower is better)
Translates to: AAKIIALGQFQL*KVWFPVMATPC
Trigger: ACAGGGTGTGGCCATCACAGGGAACCAGACCTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS CAA 90 bp CCATATCCAATGGTGGTAATGACGGTCGCTGCAAAAATCATTGCATaGGGCCAGTTCCAGTTGTTGAAGGTCTGGTTCCCTGTGATGGCC +
Preference number: 6 (lower is better)
Translates to: PYPMVVMTVAAKIIA*GQFQLLKVWFPVMA
Trigger: GGCCATCACAGGGAACCAGACCTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCAGCGACCGTCATTACCACCATTGGATATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 72 bp TCCAATGGTGGTAATGACGGTCGCTGCAAAAATCATTaGATTGGGCCAGTTCCAGTTGTTGAAGGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: SNGGNDGRCKNH*IGPVPVVEGLV
Trigger: AACCAGACCTTCAACAACTGGAACTGGCCCAATGCAATGATTTTTGCAGCGACCGTCATTACCACCATTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4
CDS GCA 72 bp CACATTGCCATATCCAATGGTGGTAATGACGGTCGCTaGAAAAATCATTGCATTGGGCCAGTTCCAGTTGTT +
Preference number: 6 (lower is better)
Translates to: HIAISNGGNDGR*KNHCIGPVPVV
Trigger: AACAACTGGAACTGGCCCAATGCAATGATTTTTGCAGCGACCGTCATTACCACCATTGGATATGGCAATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359534.4