RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000171303

Ensembl transcript IDs: ENST00000302909.4, ENST00000620977.1

Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTCGTCAGCTGCGTTCCATCTGGGCTTCTGGGTTGCAGGTGTGGTaGGCAGAGGGCACCTCTGGTCCAAACTCCCCCACCTGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: LRQLRSIWASGLQVW*AEGTSGPNSPTWEG
Trigger: CCCTTCCCAGGTGGGGGAGTTTGGACCAGAGGTGCCCTCTGCCCACCACACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTGACGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 90 bp GTCCCTAGGAAAGACCCAGCAGAGACTGAACAGTCTGCCACGCTGTaGCCCACGGCCATTCTGCACCCTTCCCCACCTTCTCTCCGCAGC +
Preference number: 1 (lower is better)
Translates to: VPRKDPAETEQSATL*PTAILHPSPPSLRS
Trigger: GCTGCGGAGAGAAGGTGGGGAAGGGTGCAGAATGGCCGTGGGGCACAGCGTGGCAGACTGTTCAGTCTCTGCTGGGTCTTTCCTAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp AGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTaGCCAAGAAGAGAAGAGGCTGAACCTCAGCAGTGCCCTCTGATC +
Preference number: 1 (lower is better)
Translates to: RPLCSLRGPFRAAAS*PRREEAEPQQCPLI
Trigger: GATCAGAGGGCACTGCTGAGGTTCAGCCTCTTCTCTTCTTGGCCAGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp CATCTGGGCTTCTGGGTTGCAGGTGTGGTGGGCAGAGGGCACCTCTaGTCCAAACTCCCCCACCTGGGAAGGGTGTTTCTTGCTGCAGCC +
Preference number: 1 (lower is better)
Translates to: HLGFWVAGVVGRGHL*SKLPHLGRVFLAAA
Trigger: GGCTGCAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGGACCAGAGGTGCCCTCTGCCCACCACACCTGCAACCCAGAAGCCCAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp CACCTTCGTCAGCTGCGTTCCATCTGGGCTTCTGGGTTGCAGGTGTaGTGGGCAGAGGGCACCTCTGGTCCAAACTCCCCCACCTGGGAA +
Preference number: 1 (lower is better)
Translates to: HLRQLRSIWASGLQV*WAEGTSGPNSPTWE
Trigger: TTCCCAGGTGGGGGAGTTTGGACCAGAGGTGCCCTCTGCCCACCACACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTGACGAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp GCCACCCTACGGGTGCTGCCCTCCAATTTCCCTGAATGCCAGGGCTaGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATG +
Preference number: 1 (lower is better)
Translates to: ATLRVLPSNFPECQG*PWSAVLRSWQGNSM
Trigger: CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCATTCAGGGAAATTGGAGGGCAGCACCCGTAGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 90 bp TTCCCCACCTTCTCTCCGCAGCTTTGGTTGTGGCTCCCTCGGGACTaGCAGGACAGGACCCTTCGAGGGCAGGGTCACACACAGGACAGA +
Preference number: 1 (lower is better)
Translates to: FPTFSPQLWLWLPRD*QDRTLRGQGHTQDR
Trigger: TCTGTCCTGTGTGTGACCCTGCCCTCGAAGGGTCCTGTCCTGTCAGTCCCGAGGGAGCCACAACCAAAGCTGCGGAGAGAAGGTGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp CTACGGGTGCTGCCCTCCAATTTCCCTGAATGCCAGGGCTGGCCTTaGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGGGAAGG +
Preference number: 1 (lower is better)
Translates to: LRVLPSNFPECQGWP*SAVLRSWQGNSMGR
Trigger: CCTTCCCATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCATTCAGGGAAATTGGAGGGCAGCACCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp CCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCTCTGAGGACTaGGAGCTTCTTAGATTTTCAAAGGGAAGGGAGGCTCCCAGCTTC +
Preference number: 1 (lower is better)
Translates to: PSEGGGLGTSRVSED*ELLRFSKGREAPSF
Trigger: GAAGCTGGGAGCCTCCCTTCCCTTTGAAAATCTAAGAAGCTCCCAGTCCTCAGAGACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR GCA 90 bp AGGGCACCTCTGGTCCAAACTCCCCCACCTGGGAAGGGTGTTTCTTaGTGCAGCCTCAGCTTATCACTAGCTACTTGGGACACAGGCACC +
Preference number: 1 (lower is better)
Translates to: RAPLVQTPPPGKGVS*CSLSLSLATWDTGT
Trigger: GGTGCCTGTGTCCCAAGTAGCTAGTGATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGGACCAGAGGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 90 bp GCACCTCTGGTCCAAACTCCCCCACCTGGGAAGGGTGTTTCTTGCTaGAGCCTCAGCTTATCACTAGCTACTTGGGACACAGGCACCAAC +
Preference number: 1 (lower is better)
Translates to: APLVQTPPPGKGVSC*SLSLSLATWDTGTN
Trigger: GTTGGTGCCTGTGTCCCAAGTAGCTAGTGATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGGACCAGAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 90 bp TCCCCAGTCCTAGTTCCTAGCCTAGGTCTGCCACTCACTGCTGTGTaGCTCAGGCAGGCGATTTGCTCTCTGTGGGCCTCAGTTACTCAT +
Preference number: 1 (lower is better)
Translates to: SPVLVPSLGLPLTAV*LRQAICSLWASVTH
Trigger: ATGAGTAACTGAGGCCCACAGAGAGCAAATCGCCTGCCTGAGTCACACAGCAGTGAGTGGCAGACCTAGGCTAGGAACTAGGACTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 90 bp CTGCTCTCACGGTCTGTCGTAGGTTCTGAGGCCCAGTCCCAAGCCTaGGCTGTCCCTCTAGACCCAGAGAAAAATCTACCCCAAAGAAAG +
Preference number: 1 (lower is better)
Translates to: LLSRSVVGSEAQSQA*AVPLDPEKNLPQRK
Trigger: CTTTCTTTGGGGTAGATTTTTCTCTGGGTCTAGAGGGACAGCTCAGGCTTGGGACTGGGCCTCAGAACCTACGACAGACCGTGAGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp GGGAAGGGTGTTTCTTGCTGCAGCCTCAGCTTATCACTAGCTACTTaGGACACAGGCACCAACAATGACAATGGTGCCAGGTGTGATGTC +
Preference number: 1 (lower is better)
Translates to: GKGVSCCSLSLSLAT*DTGTNNDNGARCDV
Trigger: GACATCACACCTGGCACCATTGTCATTGTTGGTGCCTGTGTCCCAAGTAGCTAGTGATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 90 bp AGAGAAGAGGCTGAACCTCAGCAGTGCCCTCTGATCCGGGACTTCTaGTTCTGGTTTAAAACCCAGGTAGCCACACAATGCCAGGATGTA +
Preference number: 1 (lower is better)
Translates to: REEAEPQQCPLIRDF*FWFKTQVATQCQDV
Trigger: TACATCCTGGCATTGTGTGGCTACCTGGGTTTTAAACCAGAATCAGAAGTCCCGGATCAGAGGGCACTGCTGAGGTTCAGCCTCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 90 bp GCACCAACAATGACAATGGTGCCAGGTGTGATGTCCCATAGGATATaGCTGCCAGCTTTCTTGGCCACTCTGCCCAATTCCCAAATTCCT +
Preference number: 1 (lower is better)
Translates to: APTMTMVPGVMSHRI*LPAFLATLPNSQIP
Trigger: AGGAATTTGGGAATTGGGCAGAGTGGCCAAGAAAGCTGGCAGGCATATCCTATGGGACATCACACCTGGCACCATTGTCATTGTTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp ATGGTGAGTCTGAAGTCTTCTGTTCCAGATTCTAAGGGCAGTGTCTaGAAGGCTGAAGTCCTACCTGCTATGAGAATGTGGCTGGAGGCC +
Preference number: 1 (lower is better)
Translates to: MVSLKSSVPDSKGSV*KAEVLPAMRMWLEA
Trigger: GGCCTCCAGCCACATTCTCATAGCAGGTAGGACTTCAGCCTTCCAGACACTGCCCTTAGAATCTGGAACAGAAGACTTCAGACTCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp CAGGATGTACACTGCAGGAGCTTTGCTTTTAAGAGCAGGCCAAGCTaGAAGGAAAGAACACTTTGGCTAGCAACAAGCAGGCTGGGCTCT +
Preference number: 1 (lower is better)
Translates to: QDVHCRSFAFKSRPS*KERTLWLATSRLGS
Trigger: AGAGCCCAGCCTGCTTGTTGCTAGCCAAAGTGTTCTTTCCTTCCAGCTTGGCCTGCTCTTAAAAGCAAAGCTCCTGCAGTGTACATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp ATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTGGGCACTaGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTTCTCCAGTAT +
Preference number: 1 (lower is better)
Translates to: IFQLTYAGNEGRCGH*EKVSLLPLSLFLQY
Trigger: ATACTGGAGAAATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 90 bp CCCTCCTTCTTTCTGTCCTGCTTTCTGGGGACCAGCTTTAGGGACTaGTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACA +
Preference number: 1 (lower is better)
Translates to: PSFFLSCFLGTSFRD*WVSTFSITAKPCKT
Trigger: TGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCCCTAAAGCTGGTCCCCAGAAAGCAGGACAGAAAGAAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR CCA 90 bp AGCTTTGCTTTTAAGAGCAGGCCAAGCTGGAAGGAAAGAACACTTTaGCTAGCAACAAGCAGGCTGGGCTCTTGTCTCCCTTTGCCATTT +
Preference number: 1 (lower is better)
Translates to: SFAFKSRPSWKERTL*LATSRLGSCLPLPF
Trigger: AAATGGCAAAGGGAGACAAGAGCCCAGCCTGCTTGTTGCTAGCCAAAGTGTTCTTTCCTTCCAGCTTGGCCTGCTCTTAAAAGCAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 90 bp AATGGGAGTGAGAACTCCTGCCCTGATGACCTAAGTAGGGTTTTGTaGGACTCAAAGGAATCAGTGGCCAGCATAGAGTTTTCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: NGSENSCPDDLSRVL*DSKESVASIEFSEA
Trigger: AGCCTCTGAAAACTCTATGCTGGCCACTGATTCCTTTGAGTCTCACAAAACCCTACTTAGGTCATCAGGGCAGGAGTTCTCACTCCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 90 bp TCCTTCTTTCTGTCCTGCTTTCTGGGGACCAGCTTTAGGGACTGCTaGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACA +
Preference number: 1 (lower is better)
Translates to: SFFLSCFLGTSFRDC*VSTFSITAKPCKTT
Trigger: TGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCCCTAAAGCTGGTCCCCAGAAAGCAGGACAGAAAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR GCA 90 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGCAGGCCGCTGCCTCCTaGCTCCCAGCTCGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: CQGWPWSAVLRSWQGNSMQAAAS*LPARPS
Trigger: GGAGGGGCGAGCTGGGAGGCAGGAGGCAGCGGCCTG...CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp CGTACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGGCAGGGGCAGTCTCCTaGCCTCCCAGCAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: RTRNMKSPPKVGVWVPAGAGAVS*PPSRGP
Trigger: GGGACCCCTGCTGGGAGGCCAGGAGACTGCCCCTGC...CCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR CCA 90 bp CGTACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTGTGCGGGGTCCCACTaGGCAGAAGGCAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RTRNMKSPPKVGVWVPAGCAGSH*AEGSRG
Trigger: GCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACA...CCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR GCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTCCTCCTGCCGGCTGGTaGAAGCAGGCACAGTCGGAG +
Preference number: 2 (lower is better)
Translates to: SDKGPCAASGAHSELLPPPPAGW*KQAQSE
Trigger: CTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGG...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp ACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGTACAGAGCCCGGCCTCCTaGCGGCTGGTGCAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: TPWLLEPREGGRPSRTEVQSPAS*RLVQAG
Trigger: GCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG...TACCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR GCA 90 bp CAGGAGAAGGAATCCATTCTCCTGGCTGACTGGGAGGTACCACTGTCAGCTGGGCCAGCTCGCCCCTCCTaGTGCCTGCCTGTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: QEKESILLADWEVPLSAGPARPS*CLPVPP
Trigger: AGGAGGGACAGGCAGGCAGCAGGAGGGGCGAGCTGG...CCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAGCAGGGGCAGTCTCCTaGCCTCCCAGCAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGAGAVS*PPSRGP
Trigger: GGGACCCCTGCTGGGAGGCCAGGAGACTGCCCCTGC...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR TCA 90 bp CATCAAAGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGAGCTGGGGTGGGGCCTaGGGCTGGCCACCCTACGGG +
Preference number: 2 (lower is better)
Translates to: HQSFPLCIFQLTYAGNEGSWGGA*GWPPYG
Trigger: CCCGTAGGGTGGCCAGCCTCAGGCCCCACCCCAGCT...CCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCTTTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp CGAGGGGCGGTGTGGGCACTGGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTGGGCCCATTCAGAGCTaGTGCCTCCTGGCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: RGAVWALGESVPTPTLFIGPIQS*CLLAKK
Trigger: CTTCTTGGCCAGGAGGCAGCAGCTCTGAATGGGCCC...AATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CAA 90 bp GAGGGCACCTCTGGTCCAAACTCCCCCACCTGGGAAGGGTGTTTCTaGCTGCAGCCTCAGCTTATCACTAGCTACTTGGGACACAGGCAC +
Preference number: 2 (lower is better)
Translates to: EGTSGPNSPTWEGCF*LQPQLITSYLGHRH
Trigger: GTGCCTGTGTCCCAAGTAGCTAGTGATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGGACCAGAGGTGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR TCA 90 bp GGTGTGGTCGTGAGGGCATGGTCACCCACACATATTGCATATTCTGTGGCAGTGAAGCATGCGCCCCAGTaGCAAAGGCCCCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: GVVVRAWSPTHIAYSVAVKHAPQ*QRPLCS
Trigger: GCTGCACAGGGGCCTTTGTCACTGGGGCGCATGCTT...CACTGCCACAGAATATGCAATATGTGTGGGTGACCATGCCCTCACGACCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGGGGAAGGGTGTTTCTTaGTGCAGCCTCAGCTTATCA +
Preference number: 2 (lower is better)
Translates to: CQGWPWSAVLRSWQGNSMGKGVS*CSLSLS
Trigger: TGATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCC...CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp CGAGGGGCGGTGTGGGCACTGGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTGCTGACCTGGGGAGCTaGCACCAGATGGATAAGGTG +
Preference number: 2 (lower is better)
Translates to: RGAVWALGESVPTPTLFIADLGS*HQMDKV
Trigger: CACCTTATCCATCTGGTGCCAGCTCCCCAGGTCAGC...AATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp TTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGCAGAGCCCGGCCTCCTaGCGGCTGGTGCAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: FHFLHNCKAMQNNTKGGWQSPAS*RLVQAG
Trigger: GCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG...CCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR TCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAAACGTACACGGAACATaGAGTCCCCTCCGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGNVHGT*SPLRRW
Trigger: CCACCTTCGGAGGGGACTTCATGTTCCGTGTACGTT...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR GCA 90 bp GGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCACATTTCTCGGAATTTaGAGGGCTCCGATGGGGGCC +
Preference number: 2 (lower is better)
Translates to: GDLDIDTLAFGTKGRWETTFLGI*RAPMGA
Trigger: GGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGT...GGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR CCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTAGGGTCTCTGAGGACTaGGAGCTTCTTAGATTTTCA +
Preference number: 2 (lower is better)
Translates to: SDKGPCAASGAHSELLPPRVSED*ELLRFS
Trigger: TGAAAATCTAAGAAGCTCCCAGTCCTCAGAGACCCT...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGACCTCCTGCCGGCTGGTaGAAGCAGGCACAGTCGGAG +
Preference number: 2 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGPPAGW*KQAQSE
Trigger: CTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGG...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR GCA 90 bp CAGGAGAAGGAATCCATTCTCCTGGCTGACTGGGAGGTACCACTGTCAGCTGGGACCAGCTTTAGGGACTaGTGGGTTTCCACTTTCTCC +
Preference number: 2 (lower is better)
Translates to: QEKESILLADWEVPLSAGTSFRD*WVSTFS
Trigger: GGAGAAAGTGGAAACCCAGCAGTCCCTAAAGCTGGT...CCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp GGACTGCTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAGTCCCCTCCGAAGGTaGGGGTCTGGGTACCAGCAG +
Preference number: 2 (lower is better)
Translates to: GLLGFHFLHNCKAMQNNTSPLRR*GSGYQQ
Trigger: CTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACT...CGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR CCA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGGGCAGGGGAACAGCATaGGAAGGCAGTGTTGCGGGA +
Preference number: 2 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWGRGTA*EGSVAG
Trigger: TCCCGCAACACTGCCTTCCCATGCTGTTCCCCTGCC...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CAA 90 bp ATGGTGCCAGGTGTGATGTCCCATAGGATATGCCTGCCAGCTTTCTaGGCCACTCTGCCCAATTCCCAAATTCCTAGAGCCCCAGATCCT +
Preference number: 2 (lower is better)
Translates to: MVPGVMSHRICLPAF*ATLPNSQIPRAPDP
Trigger: AGGATCTGGGGCTCTAGGAATTTGGGAATTGGGCAGAGTGGCCAAGAAAGCTGGCAGGCATATCCTATGGGACATCACACCTGGCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp CGAGGGGCGGTGTGGGCACTGGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTTCCTTCTTTCTGTCCTaGTTTCTGGGGACCAGCTTT +
Preference number: 2 (lower is better)
Translates to: RGAVWALGESVPTPTLFISFFLS*FLGTSF
Trigger: AAAGCTGGTCCCCAGAAAGCAGGACAGAAAGAAGGA...AATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp AGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTGCTGGAGTACAGTGGTaGAATCAGGGCTCACTACAG +
Preference number: 2 (lower is better)
Translates to: SFPLCIFQLTYAGNEGRCAGVQW*NQGSLQ
Trigger: CTGTAGTGAGCCCTGATTGCACCACTGTACTCCAGC...ACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp AGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTAGGAATCCATTCTCCTaGCTGACTGGGAGGTACCAC +
Preference number: 2 (lower is better)
Translates to: SFPLCIFQLTYAGNEGRCRNPFS*LTGRYH
Trigger: GTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCT...ACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp GGTGTGGTCGTGAGGGCATGGTCACCCACACATATTGCATATTCTGTGGCAGTGATGTCCCATAGGATATaGCTGCCAGCTTTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: GVVVRAWSPTHIAYSVAVMSHRI*LPAFLA
Trigger: GGCCAAGAAAGCTGGCAGGCATATCCTATGGGACAT...CACTGCCACAGAATATGCAATATGTGTGGGTGACCATGCCCTCACGACCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp TTTCTTAGTCTGTTCCAAGGGGACTTAAGAAAATCTGGATCTTCTGGGAAATCCTGTGCGGGGTCCCACTaGGCAGAAGGCAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: FLSLFQGDLRKSGSSGKSCAGSH*AEGSRG
Trigger: GCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACA...GGATTTCCCAGAAGATCCAGATTTTCTTAAGTCCCCTTGGAACAGACTAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp TTTCTTAGTCTGTTCCAAGGGGACTTAAGAAAATCTGGATCTTCTGGGAAATCCGCTCGCCCCTCCTGCTaGCTGCCTGTCCCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: FLSLFQGDLRKSGSSGKSARPSC*LPVPPS
Trigger: AGAAGGAGGGACAGGCAGGCAGCAGGAGGGGCGAGC...GGATTTCCCAGAAGATCCAGATTTTCTTAAGTCCCCTTGGAACAGACTAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp CATCAAAGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGTTCAAGCGATTCTCGTaGGTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: HQSFPLCIFQLTYAGNEGFKRFS*VSLLSS
Trigger: GCTACTCAGGAGGCTGACGCACGAGAATCGCTTGAA...CCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCTTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGAGGGTCTCTGAGGACTaGGAGCTTCTTAGATTTTCA +
Preference number: 2 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKRVSED*ELLRFS
Trigger: TGAAAATCTAAGAAGCTCCCAGTCCTCAGAGACCCT...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR-3UTR CCA 90 bp AGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTAAGAGCAGGCCAAGCTaGAAGGAAAGAACACTTTGG +
Preference number: 2 (lower is better)
Translates to: SFPLCIFQLTYAGNEGRCKSRPS*KERTLW
Trigger: CCAAAGTGTTCTTTCCTTCCAGCTTGGCCTGCTCTT...ACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACAATCACCTTCGTCAGCTaGGTTCCATCTGGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTITFVS*VPSGLL
Trigger: CAGAAGCCCAGATGGAACGCAGCTGACGAAGGTGAT...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp AGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTAAGGAAAGAACACTTTaGCTAGCAACAAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SFPLCIFQLTYAGNEGRCKERTL*LATSRL
Trigger: CAGCCTGCTTGTTGCTAGCCAAAGTGTTCTTTCCTT...ACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp TCTGCAGGTATTAAACCATTAGCAGGTAGAGACATCAATTTAGTGGATCGTGACTCTGGGCTTCTGGGTTaGAGGTGTGGTGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: SAGIKPLAGRDINLVDRDSGLLG*RCGGQR
Trigger: CCTCTGCCCACCACACCTGCAACCCAGAAGCCCAGA...GTCACGATCCACTAAATTGATGTCTCTACCTGCTAATGGTTTAATACCTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp TCTGCAGGTATTAAACCATTAGCAGGTAGAGACATCAATTTAGTGGATCGTGACTGGCCACCCTACGGGTaGTGCCCTCCAATTTCCCTG +
Preference number: 2 (lower is better)
Translates to: SAGIKPLAGRDINLVDRDWPPYG*CPPISL
Trigger: CAGGGAAATTGGAGGGCAGCACCCGTAGGGTGGCCA...GTCACGATCCACTAAATTGATGTCTCTACCTGCTAATGGTTTAATACCTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCAGGCACAGTCGGAGATaGGGGTGCTGGGGGAGAGTG +
Preference number: 2 (lower is better)
Translates to: FAARLFITFIKLRCLAKLRHSRR*GCWGRV
Trigger: CACTCTCCCCCAGCACCCCCATCTCCGACTGTGCCT...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR TCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCGTCTGTCGTAGGTTCTaGGGCCCAGTCCCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: FAARLFITFIKLRCLAKLVCRRF*GPVPSL
Trigger: CAGGCTTGGGACTGGGCCTCAGAACCTACGACAGAC...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGCTTTCTTGGCCACTCTaGCCAATTCCCAAATTCCTA +
Preference number: 2 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWLSWPL*PIPKFL
Trigger: TAGGAATTTGGGAATTGGGCAGAGTGGCCAAGAAAG...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp TTTCTTAGTCTGTTCCAAGGGGACTTAAGAAAATCTGGATCTTCTGGGAAATCCGCCTGCCAGCTTTCTTaGCCACTCTGCCCAATTCCC +
Preference number: 2 (lower is better)
Translates to: FLSLFQGDLRKSGSSGKSACQLS*PLCPIP
Trigger: GGGAATTGGGCAGAGTGGCCAAGAAAGCTGGCAGGC...GGATTTCCCAGAAGATCCAGATTTTCTTAAGTCCCCTTGGAACAGACTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp TTTCTTAGTCTGTTCCAAGGGGACTTAAGAAAATCTGGATCTTCTGGGAAATCCCAGCTGCGTTCCATCTaGGCTTCTGGGTTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: FLSLFQGDLRKSGSSGKSQLRSI*ASGLQV
Trigger: CACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTG...GGATTTCCCAGAAGATCCAGATTTTCTTAAGTCCCCTTGGAACAGACTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR TCA 90 bp TCTGCAGGTATTAAACCATTAGCAGGTAGAGACATCAATTTAGTGGATCGTGACAACGTACACGGAACATaGAGTCCCCTCCGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: SAGIKPLAGRDINLVDRDNVHGT*SPLRRW
Trigger: CCACCTTCGGAGGGGACTTCATGTTCCGTGTACGTT...GTCACGATCCACTAAATTGATGTCTCTACCTGCTAATGGTTTAATACCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp TTTCTTAGTCTGTTCCAAGGGGACTTAAGAAAATCTGGATCTTCTGGGAAATCCAACACGAAGGGAGGTTaGGAGACACAGCTGGGGATG +
Preference number: 2 (lower is better)
Translates to: FLSLFQGDLRKSGSSGKSNTKGG*ETQLGM
Trigger: CATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTT...GGATTTCCCAGAAGATCCAGATTTTCTTAAGTCCCCTTGGAACAGACTAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp TCTGCAGGTATTAAACCATTAGCAGGTAGAGACATCAATTTAGTGGATCGTGACCCAAACTCCCCCACCTaGGAAGGGTGTTTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: SAGIKPLAGRDINLVDRDPNSPT*EGCFLL
Trigger: CAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGG...GTCACGATCCACTAAATTGATGTCTCTACCTGCTAATGGTTTAATACCTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR TCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCGGAGGCCAGTTAGCTTaGACCTCCAGTGCGACCATT +
Preference number: 2 (lower is better)
Translates to: FAARLFITFIKLRCLAKLGGQLA*TSSATI
Trigger: AATGGTCGCACTGGAGGTTCAAGCTAACTGGCCTCC...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR GCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCTCCAATTTCCCTGAATaGCAGGGCTGGCCTTGGTCG +
Preference number: 2 (lower is better)
Translates to: FAARLFITFIKLRCLAKLSNFPE*QGWPWS
Trigger: CGACCAAGGCCAGCCCTGGCATTCAGGGAAATTGGA...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CCA 90 bp AGAGAAGGAGCCCACGCTAGAACCTCAGGCAATTCTGAGATCTTAGGAGATGTGAAAATCTGGATCTTCTaGGAAATCCCAAAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: REGAHARTSGNSEILGDVKIWIF*EIPKGK
Trigger: CTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTT...CACATCTCCTAAGATCTCAGAATTGCCTGAGGTTCTAGCGTGGGCTCCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR TCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCCAATGGTGCCAGGTGTaGTGTCCCATAGGATATGCC +
Preference number: 2 (lower is better)
Translates to: FAARLFITFIKLRCLAKLQWCQV*CPIGYA
Trigger: GGCATATCCTATGGGACATCACACCTGGCACCATTG...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR TCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCGCGCCATTCTCAGTGTaGAGACAGATAGGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: FAARLFITFIKLRCLAKLAPFSV*RQIGRK
Trigger: CTTCCTGCCTATCTGTCTTCACACTGAGAATGGCGC...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 72 bp CCAGGGGTCCTCAGAGCCCGGCCTCCTGCCGGCTGGTaGAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: PGVLRARPPAGW*KQAQSEMGVLG
Trigger: CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAGGACCCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR CCA 72 bp CTGCGTTCCATCTGGGCTTCTGGGTTGCAGGTGTGGTaGGCAGAGGGCACCTCTGGTCCAAACTCCCCCACC +
Preference number: 3 (lower is better)
Translates to: LRSIWASGLQVW*AEGTSGPNSPT
Trigger: GGTGGGGGAGTTTGGACCAGAGGTGCCCTCTGCCCACCACACCTGCAACCCAGAAGCCCAGATGGAACGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTaGCAGGGGAACAGCATGGGAAGGCAGTGTTGCGGG +
Preference number: 3 (lower is better)
Translates to: CQGWPWSAVLRS*QGNSMGRQCCG
Trigger: CCCGCAACACTGCCTTCCCATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp GCTGGCCACCCTACGGGTGCTGCCCTCCAATTTCCCTaGATGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAG +
Preference number: 3 (lower is better)
Translates to: AGHPTGAALQFP*MPGLALVGSVK
Trigger: CTTAACACTGCCGACCAAGGCCAGCCCTGGCATTCAGGGAAATTGGAGGGCAGCACCCGTAGGGTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 72 bp GCCACCCTACGGGTGCTGCCCTCCAATTTCCCTGAATaGCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGC +
Preference number: 3 (lower is better)
Translates to: ATLRVLPSNFPE*QGWPWSAVLRS
Trigger: GCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCATTCAGGGAAATTGGAGGGCAGCACCCGTAGGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp TTCTCTCCGCAGCTTTGGTTGTGGCTCCCTCGGGACTaGCAGGACAGGACCCTTCGAGGGCAGGGTCACACA +
Preference number: 3 (lower is better)
Translates to: FSPQLWLWLPRD*QDRTLRGQGHT
Trigger: TGTGTGACCCTGCCCTCGAAGGGTCCTGTCCTGTCAGTCCCGAGGGAGCCACAACCAAAGCTGCGGAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp CTGCCCTCCAATTTCCCTGAATGCCAGGGCTGGCCTTaGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGC +
Preference number: 3 (lower is better)
Translates to: LPSNFPECQGWP*SAVLRSWQGNS
Trigger: GCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCATTCAGGGAAATTGGAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp GCCCCTACTGCAGGAGAAGGAATCCATTCTCCTGGCTaGCTGGGAGGTACCACTGTCAGCTGGGGTGTGTCC +
Preference number: 3 (lower is better)
Translates to: APTAGEGIHSPG*LGGTTVSWGVS
Trigger: GGACACACCCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTGCAGTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp TGGGCAGAGGGCACCTCTGGTCCAAACTCCCCCACCTaGGAAGGGTGTTTCTTGCTGCAGCCTCAGCTTATC +
Preference number: 3 (lower is better)
Translates to: WAEGTSGPNSPT*EGCFLLQPQLI
Trigger: GATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGGACCAGAGGTGCCCTCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp TTCTGGGTTGCAGGTGTGGTGGGCAGAGGGCACCTCTaGTCCAAACTCCCCCACCTGGGAAGGGTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: FWVAGVVGRGHL*SKLPHLGRVFL
Trigger: AAGAAACACCCTTCCCAGGTGGGGGAGTTTGGACCAGAGGTGCCCTCTGCCCACCACACCTGCAACCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp CAGTGTTGCGGGAGGAGAGGCCCCTCATCCACCCCTTaGTGTTGTCCCAGTCATTATACCGGCTCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: QCCGRRGPSSTP*CCPSHYTGSSC
Trigger: ACAGCTGGAGCCGGTATAATGACTGGGACAACATCAAGGGGTGGATGAGGGGCCTCTCCTCCCGCAACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp CTACTGCAGGAGAAGGAATCCATTCTCCTGGCTGACTaGGAGGTACCACTGTCAGCTGGGGTGTGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: LLQEKESILLAD*EVPLSAGVCPG
Trigger: GCCTGGACACACCCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTGCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CAA 90 bp AGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTCTTCTCTCCGCAGCTTaGGTTGTGGCTCCCTCGGGA +
Preference number: 3 (lower is better)
Translates to: SFPLCIFQLTYAGNEGRCLLSAA*VVAPSG
Trigger: TCCCGAGGGAGCCACAACCAAAGCTGCGGAGAGAAG...ACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp CTAGTTCCTAGCCTAGGTCTGCCACTCACTGCTGTGTaGCTCAGGCAGGCGATTTGCTCTCTGTGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: LVPSLGLPLTAV*LRQAICSLWAS
Trigger: TGAGGCCCACAGAGAGCAAATCGCCTGCCTGAGTCACACAGCAGTGAGTGGCAGACCTAGGCTAGGAACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp CGGTCTGTCGTAGGTTCTGAGGCCCAGTCCCAAGCCTaGGCTGTCCCTCTAGACCCAGAGAAAAATCTACCC +
Preference number: 3 (lower is better)
Translates to: RSVVGSEAQSQA*AVPLDPEKNLP
Trigger: GGGTAGATTTTTCTCTGGGTCTAGAGGGACAGCTCAGGCTTGGGACTGGGCCTCAGAACCTACGACAGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 72 bp CTGGTCCAAACTCCCCCACCTGGGAAGGGTGTTTCTTaGTGCAGCCTCAGCTTATCACTAGCTACTTGGGAC +
Preference number: 3 (lower is better)
Translates to: LVQTPPPGKGVS*CSLSLSLATWD
Trigger: GTCCCAAGTAGCTAGTGATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 72 bp GGGTGTGGTCGTGAGGGCATGGTCACCCACACATATTaGATATTCTGTGGCAGTGTGCCCAGGCATAAGGCA +
Preference number: 3 (lower is better)
Translates to: GCGREGMVTHTY*IFCGSVPRHKA
Trigger: TGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGACCATGCCCTCACGACCACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp ACCTGCTATGAGAATGTGGCTGGAGGCCAGTTAGCTTaGACCTCCAGTGCGACCATTCTGCAGACTGACAGG +
Preference number: 3 (lower is better)
Translates to: TCYENVAGGQLA*TSSATILQTDR
Trigger: CCTGTCAGTCTGCAGAATGGTCGCACTGGAGGTTCAAGCTAACTGGCCTCCAGCCACATTCTCATAGCAGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp ACAGAGCTGTGTGCTATTACTGTGGATTGTACTCTATaGAGTCCGGGGGTCGCTGTAGCTGACCTGGGGAGC +
Preference number: 3 (lower is better)
Translates to: TELCAITVDCTL*SPGVAVADLGS
Trigger: GCTCCCCAGGTCAGCTACAGCGACCCCCGGACTTCATAGAGTACAATCCACAGTAATAGCACACAGCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 72 bp GTCCAAACTCCCCCACCTGGGAAGGGTGTTTCTTGCTaGAGCCTCAGCTTATCACTAGCTACTTGGGACACA +
Preference number: 3 (lower is better)
Translates to: VQTPPPGKGVSC*SLSLSLATWDT
Trigger: TGTGTCCCAAGTAGCTAGTGATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp TTGATGTTGTCCCAGTCATTATACCGGCTCCAGCTGTaGGGCCCCAAAAGTGAGCCTCAAGCATCACCTTCG +
Preference number: 3 (lower is better)
Translates to: LMLSQSLYRLQL*GPKSEPQASPS
Trigger: CGAAGGTGATGCTTGAGGCTCACTTTTGGGGCCCCACAGCTGGAGCCGGTATAATGACTGGGACAACATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp TTGACCTATGCGGGTAACGAGGGGCGGTGTGGGCACTaGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTT +
Preference number: 3 (lower is better)
Translates to: LTYAGNEGRCGH*EKVSLLPLSLF
Trigger: AAATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCGTTACCCGCATAGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CAA 90 bp CCTCAAGCATCACCTTCGTCAGCTGCGTTCCATCTGGGCTTCTGGGTTGCAGGTCTTATCACTAGCTACTaGGGACACAGGCACCAACAA +
Preference number: 3 (lower is better)
Translates to: PQASPSSAAFHLGFWVAGLITSY*GHRHQQ
Trigger: TTGTTGGTGCCTGTGTCCCAAGTAGCTAGTGATAAG...ACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTGACGAAGGTGATGCTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR-3UTR CAA 90 bp GGTGTGGTCGTGAGGGCATGGTCACCCACACATATTGCATATTCTGTGGCAGTGCCCCTCATCCACCCCTaGATGTTGTCCCAGTCATTA +
Preference number: 3 (lower is better)
Translates to: GVVVRAWSPTHIAYSVAVPLIHP*MLSQSL
Trigger: TAATGACTGGGACAACATCAAGGGGTGGATGAGGGG...CACTGCCACAGAATATGCAATATGTGTGGGTGACCATGCCCTCACGACCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp GCTGAACCTCAGCAGTGCCCTCTGATCCGGGACTTCTaGTTCTGGTTTAAAACCCAGGTAGCCACACAATGC +
Preference number: 3 (lower is better)
Translates to: AEPQQCPLIRDF*FWFKTQVATQC
Trigger: GCATTGTGTGGCTACCTGGGTTTTAAACCAGAATCAGAAGTCCCGGATCAGAGGGCACTGCTGAGGTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 72 bp ATGACAATGGTGCCAGGTGTGATGTCCCATAGGATATaGCTGCCAGCTTTCTTGGCCACTCTGCCCAATTCC +
Preference number: 3 (lower is better)
Translates to: MTMVPGVMSHRI*LPAFLATLPNS
Trigger: GGAATTGGGCAGAGTGGCCAAGAAAGCTGGCAGGCATATCCTATGGGACATCACACCTGGCACCATTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp CTGTCCTGCTTTCTGGGGACCAGCTTTAGGGACTGCTaGGTTTCCACTTTCTCCATAACTGCAAAGCCATGC +
Preference number: 3 (lower is better)
Translates to: LSCFLGTSFRDC*VSTFSITAKPC
Trigger: GCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCCCTAAAGCTGGTCCCCAGAAAGCAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR TCA 72 bp AGAGGTATAAATAGAGATGCAAACGTACACGGAACATaGAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAG +
Preference number: 3 (lower is better)
Translates to: RGINRDANVHGT*SPLRRWGSGYQ
Trigger: CTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACGTTTGCATCTCTATTTATACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR GCA 72 bp AAAACCCAGGTAGCCACACAATGCCAGGATGTACACTaGAGGAGCTTTGCTTTTAAGAGCAGGCCAAGCTGG +
Preference number: 3 (lower is better)
Translates to: KTQVATQCQDVH*RSFAFKSRPSW
Trigger: CCAGCTTGGCCTGCTCTTAAAAGCAAAGCTCCTGCAGTGTACATCCTGGCATTGTGTGGCTACCTGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp TTTAAGAGCAGGCCAAGCTGGAAGGAAAGAACACTTTaGCTAGCAACAAGCAGGCTGGGCTCTTGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: FKSRPSWKERTL*LATSRLGSCLP
Trigger: AGGGAGACAAGAGCCCAGCCTGCTTGTTGCTAGCCAAAGTGTTCTTTCCTTCCAGCTTGGCCTGCTCTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp GTTTCTTGCTGCAGCCTCAGCTTATCACTAGCTACTTaGGACACAGGCACCAACAATGACAATGGTGCCAGG +
Preference number: 3 (lower is better)
Translates to: VSCCSLSLSLAT*DTGTNNDNGAR
Trigger: CCTGGCACCATTGTCATTGTTGGTGCCTGTGTCCCAAGTAGCTAGTGATAAGCTGAGGCTGCAGCAAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 72 bp TTTCTGTCCTGCTTTCTGGGGACCAGCTTTAGGGACTaGTGGGTTTCCACTTTCTCCATAACTGCAAAGCCA +
Preference number: 3 (lower is better)
Translates to: FLSCFLGTSFRD*WVSTFSITAKP
Trigger: TGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCCCTAAAGCTGGTCCCCAGAAAGCAGGACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
3UTR CCA 72 bp CACTGCAGGAGCTTTGCTTTTAAGAGCAGGCCAAGCTaGAAGGAAAGAACACTTTGGCTAGCAACAAGCAGG +
Preference number: 3 (lower is better)
Translates to: HCRSFAFKSRPS*KERTLWLATSR
Trigger: CCTGCTTGTTGCTAGCCAAAGTGTTCTTTCCTTCCAGCTTGGCCTGCTCTTAAAAGCAAAGCTCCTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CCA 72 bp CTGAAGTCTTCTGTTCCAGATTCTAAGGGCAGTGTCTaGAAGGCTGAAGTCCTACCTGCTATGAGAATGTGG +
Preference number: 3 (lower is better)
Translates to: LKSSVPDSKGSV*KAEVLPAMRMW
Trigger: CCACATTCTCATAGCAGGTAGGACTTCAGCCTTCCAGACACTGCCCTTAGAATCTGGAACAGAAGACTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR TCA 72 bp GAGAACTCCTGCCCTGATGACCTAAGTAGGGTTTTGTaGGACTCAAAGGAATCAGTGGCCAGCATAGAGTTT +
Preference number: 3 (lower is better)
Translates to: ENSCPDDLSRVL*DSKESVASIEF
Trigger: AAACTCTATGCTGGCCACTGATTCCTTTGAGTCTCACAAAACCCTACTTAGGTCATCAGGGCAGGAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR GCA 72 bp GCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATaGCTTGCGAAGCTCCATGAGTCGGTGATATTGACA +
Preference number: 3 (lower is better)
Translates to: AARLFITFIKLR*LAKLHESVILT
Trigger: TGTCAATATCACCGACTCATGGAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTCCGGCGAAGCGCCACTaGACGCCGGCCTTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: QSPASCRLVQAGTVGDGGPAKRH*TPALCG
Trigger: GCCGCACAAGGCCGGCGTGCAGTGGCGCTTCGCCGG...ACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGGCAGAGCCCGGCCTCCTaGCGGCTGGTGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RPPAGWCKQAQSEMGVLGQSPAS*RLVQAG
Trigger: GCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG...CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTCAGGCCGCTGCCTCCTaGCTCCCAGCTCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QSPASCRLVQAGTVGDGGQAAAS*LPARPS
Trigger: GGAGGGGCGAGCTGGGAGGCAGGAGGCAGCGGCCTG...ACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGGGCAGGGGCAGTCTCCTaGCCTCCCAGCAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RPPAGWCKQAQSEMGVLGAGAVS*PPSRGP
Trigger: GGGACCCCTGCTGGGAGGCCAGGAGACTGCCCCTGC...CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp CTCAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGCGTAGCCGCCCTGGCTaGGGTTGTAGCGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LRARPPAGWCKQAQSEMGRSRPG*GCSAPA
Trigger: TGCGGGCGCGCTACAACCTCAGCCAGGGCGGCTACG...CCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTCAGAGCCCGGCCTCCTaGCGGCTGGTGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QSPASCRLVQAGTVGDGGQSPAS*RLVQAG
Trigger: GCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG...ACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGGTGCCCAGCCCCTTCTTaGCGCGGTGCAGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: RPPAGWCKQAQSEMGVLGCPAPS*RGAAGT
Trigger: GGTACCTGCTGCACCGCGCCAAGAAGGGGCTGGGCA...CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CAGGGGTCCTCAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGTGCCCAGCCCCTTCTTaGCGCGGTGCAGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: QGSSEPGLLPAGASRHSRCPAPS*RGAAGT
Trigger: GGTACCTGCTGCACCGCGCCAAGAAGGGGCTGGGCA...CCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAGGACCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTCCGTGGACACCGAGCTaGTGGCGGAGCGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSPWTPS*WRSVAP
Trigger: GGGCGCCACGCTCCGCCATCAGCTCGGTGTCCACGG...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTCCTCCGCGTAGACGTTaGGGAAGCCGCCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSPPRRR*GSRRRP
Trigger: CGGGCGGCGGCGGCTTCCGCAACGTCTACGCGGAGG...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CTCAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGAGACTGACAGGCCGCTaGCTCCTGCCTCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LRARPPAGWCKQAQSEMGRLTGR*LLPPSS
Trigger: CGAGCTGGGAGGCAGGAGGCAGCGGCCTGTCAGTCT...CCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CTCAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGTGCGTCTGCAGGGCCTaGTCCTTCTGCAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: LRARPPAGWCKQAQSEMGCVCRA*SFCSAT
Trigger: CGTGGCGCTGCAGAAGGACCAGGCCCTGCAGACGCA...CCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp CGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGGCGGCGTTCATGGTCATaGAGCGCAGCACCACGAGGT +
Preference number: 4 (lower is better)
Translates to: RPPAGWCKQAQSEMGVLGRRSWS*SAAPRG
Trigger: ACCTCGTGGTGCTGCGCTTCATGACCATGAACGCCG...CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp CAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGACCATTCTGCAGACTaGCAGGCCGCTGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QSPASCRLVQAGTVGDGGDHSAD*QAAASC
Trigger: GCAGGAGGCAGCGGCCTGTCAGTCTGCAGAATGGTC...ACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp CAGGGGTCCTCAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGAGGTCCCGCGGGATaGTCATGGGGATGGAGTACT +
Preference number: 4 (lower is better)
Translates to: QGSSEPGLLPAGASRHSRRGPAG*SWGWST
Trigger: AGTACTCCATCCCCATGATCATCCCGCGGGACCTCT...CCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAGGACCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp CAGGGGTCCTCAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGCAAGGGCATACGATaGCAGAGGCAGCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QGSSEPGLLPAGASRHSRSKGIR*QRQLEP
Trigger: AGGCTCCAGCTGCCTCTGTCATCGTATGCCCTTGCT...CCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAGGACCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCAGCGTGGCGCCCCGCTaGACAGGCAGCGTCGCGAGG +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVSVAPR*TGSVAR
Trigger: CCTCGCGACGCTGCCTGTGCAGCGGGGCGCCACGCT...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTAAGGTGGACAGGCTGTaGAGACCCGTGGACACCGAG +
Preference number: 4 (lower is better)
Translates to: QSPASCRLVQAGTVGDGGKVDRL*RPVDTE
Trigger: CTCGGTGTCCACGGGTCTGCACAGCCTGTCCACCTT...ACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTCCTCCCGGCGACGAGTaGCTCTGCTCCACGCACGTG +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSPPGDE*LCSTHV
Trigger: CACGTGCGTGGAGCAGAGCCACTCGTCGCCGGGAGG...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTTGTGCGGGGTCCCACTaGGCAGAAGGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSCAGSH*AEGSRG
Trigger: GCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACA...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCCGGCCTTGTGCGGCTTaGGGCGCAGCACGACGCGCT +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVRPCAA*GAARRA
Trigger: AGCGCGTCGTGCTGCGCCTCAAGCCGCACAAGGCCG...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp AGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGCCTGCCCGTTGCGCGTaGGCAGCGCGCGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RHPGFWNQGKVGDLAGQRPARCA*AARGAR
Trigger: CCGAGCACCGCGCGCTGCTCACGCGCAACGGGCAGG...CCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CGTACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGGCCACGTACTGCGGCTaGGTCTGCAGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RTRNMKSPPKVGVWVPAGATYCG*VCRAWS
Trigger: GGACCAGGCCCTGCAGACGCAGCCGCAGTACGTGGC...CCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCCCTCCGCGTAGACGTTaGGGAAGCCGCCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPPPRRR*GSRRRP
Trigger: CGGGCGGCGGCGGCTTCCGCAACGTCTACGCGGAGG...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCTGCCGCCATCCGTGCTaGGTGCCGCGTGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVCRHPC*VPRARS
Trigger: GCTACGGGCACGCGGCACCCAGCACGGATGGCGGCA...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGCCTCCCGGCGACGAGTaGCTCTGCTCCACGCACGTG +
Preference number: 4 (lower is better)
Translates to: CQGWPWSAVLRSWQGNSMPPGDE*LCSTHV
Trigger: CACGTGCGTGGAGCAGAGCCACTCGTCGCCGGGAGG...CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGGGAGTGGGTGAGTCAATaGCAACTAAGCCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPPAGWCKQAQSEMGVLGEWVSQ*QLSPLR
Trigger: CCTCAGGGGGCTTAGTTGCCATTGACTCACCCACTC...CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGCCTGCCCGTTGCGCGTaGGCAGCGCGCGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKPARCA*AARGAR
Trigger: CCGAGCACCGCGCGCTGCTCACGCGCAACGGGCAGG...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTGAGGCAGCTGGAGCCTaGGCCTGGTCTCCGTGGATA +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSEAAGA*AWSPWI
Trigger: TATCCACGGAGACCAGGCTCAGGCTCCAGCTGCCTC...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCAGGGCCTTGCCGCCATCCGTaGTGGGTGCCGCGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: PPSFTFLGICRAPMGAPGPCRHP*WVPRAR
Trigger: ACGGGCACGCGGCACCCAGCACGGATGGCGGCAAGG...CCCTGGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCCCTTGCCGCCATCCGTaGTGGGTGCCGCGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPPCRHP*WVPRAR
Trigger: ACGGGCACGCGGCACCCAGCACGGATGGCGGCAAGG...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTTACTGCGGCTGCGTCTaGAGGGCCTGGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSYCGCV*RAWSFC
Trigger: GCAGAAGGACCAGGCCCTGCAGACGCAGCCGCAGTA...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCCCAGCTCGCCCCTCCTaGTGCCTGCCTGTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVPARPS*CLPVPP
Trigger: AGGAGGGACAGGCAGGCAGCAGGAGGGGCGAGCTGG...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTAGACTGACAGGCCGCTaGCTCCTGCCTCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SDKGPCAASGAHSELLPPRLTGR*LLPPSS
Trigger: CGAGCTGGGAGGCAGGAGGCAGCGGCCTGTCAGTCT...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCTGCCGCCATCCGTGCTaGGTGCCGCGTGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPCRHPC*VPRARS
Trigger: GCTACGGGCACGCGGCACCCAGCACGGATGGCGGCA...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTAGTCCCCTCCGAAGGTaGGGGTCTGGGTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSSPLRR*GSGYQQ
Trigger: CTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACT...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGTGGCTCCCTCGGGACTaGCAGGACAGGACCCTTCGA +
Preference number: 4 (lower is better)
Translates to: CQGWPWSAVLRSWQGNSMWLPRD*QDRTLR
Trigger: TCGAAGGGTCCTGTCCTGTCAGTCCCGAGGGAGCCA...CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCCCTCCTGCCGGCTGGTaGAAGCAGGCACAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVPPAGW*KQAQSE
Trigger: CTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGG...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGTACAGGCCGCTGCCTCCTaGCTCCCAGCTCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TPWLLEPREGGRPSRTEVQAAAS*LPARPS
Trigger: GGAGGGGCGAGCTGGGAGGCAGGAGGCAGCGGCCTG...TACCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CAGGGGTCCTCAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGGGGAAGGGTGTTTCTTaGTGCAGCCTCAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: QGSSEPGLLPAGASRHSRGKGVS*CSLSLS
Trigger: TGATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCC...CCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAGGACCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGGCCCCACGGCCATTCTaGACCCTTCCCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: CQGWPWSAVLRSWQGNSMAPRPF*TLPHLL
Trigger: GAGAAGGTGGGGAAGGGTGCAGAATGGCCGTGGGGC...CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTAGGAGCTGCCAGGAGTaGTGTCACAGGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SDKGPCAASGAHSELLPPRSCQE*CHRRAG
Trigger: GCCAGCCCTCCTGTGACAGCACTCCTGGCAGCTCCT...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGGCAGGGGCAGTCTCCTaGCCTCCCAGCAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RHPGFWNQGKVGDLAGQRAGAVS*PPSRGP
Trigger: GGGACCCCTGCTGGGAGGCCAGGAGACTGCCCCTGC...CCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGGTTCTGTCCTGCTTTCTaGGGACCAGCTTTAGGGACT +
Preference number: 4 (lower is better)
Translates to: RPPAGWCKQAQSEMGVLGFCPAF*GPALGT
Trigger: AGTCCCTAAAGCTGGTCCCCAGAAAGCAGGACAGAA...CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTGAGATGGCCCCTCCCTaGCAGCAGCAAGGGCATACG +
Preference number: 4 (lower is better)
Translates to: SDKGPCAASGAHSELLPPEMAPP*QQQGHT
Trigger: CGTATGCCCTTGCTGCTGCCAGGGAGGGGCCATCTC...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCAAGCATGCGCCCCAGTaGCAAAGGCCCCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVKHAPQ*QRPLCS
Trigger: GCTGCACAGGGGCCTTTGTCACTGGGGCGCATGCTT...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp CGTACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGCTGGCCTTTCTGCCATaGGACCCAGCCCTGCTTACC +
Preference number: 4 (lower is better)
Translates to: RTRNMKSPPKVGVWVPAGLAFLP*DPALLT
Trigger: GGTAAGCAGGGCTGGGTCTCATGGCAGAAAGGCCAG...CCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp CAGGGGTCCTCAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGTCTGTATCTTTCAGTTaGCCTATGCGGGTAACGAGG +
Preference number: 4 (lower is better)
Translates to: QGSSEPGLLPAGASRHSRSVSFS*PMRVTR
Trigger: CCTCGTTACCCGCATAGGTCAACTGAAAGATACAGA...CCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAGGACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CGAGGGGCGGTGTGGGCACTGGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTGCCACGTACTGCGGCTaGGTCTGCAGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RGAVWALGESVPTPTLFIATYCG*VCRAWS
Trigger: GGACCAGGCCCTGCAGACGCAGCCGCAGTACGTGGC...AATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp GGTGTGGTCGTGAGGGCATGGTCACCCACACATATTGCATATTCTGTGGCAGTGAGCGTGGCGCCCCGCTaGACAGGCAGCGTCGCGAGG +
Preference number: 4 (lower is better)
Translates to: GVVVRAWSPTHIAYSVAVSVAPR*TGSVAR
Trigger: CCTCGCGACGCTGCCTGTGCAGCGGGGCGCCACGCT...CACTGCCACAGAATATGCAATATGTGTGGGTGACCATGCCCTCACGACCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCGCTCGCCCCTCCTGCTaGCTGCCTGTCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPARPSC*LPVPPS
Trigger: AGAAGGAGGGACAGGCAGGCAGCAGGAGGGGCGAGC...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTGCTGAACCTCAGCAGTaGCCTCTGATCCGGGACTTC +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSAEPQQ*PLIRDF
Trigger: GAAGTCCCGGATCAGAGGGCACTGCTGAGGTTCAGC...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CGTACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTGGCCACCCTACGGGTaGTGCCCTCCAATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RTRNMKSPPKVGVWVPAGWPPYG*CPPISL
Trigger: CAGGGAAATTGGAGGGCAGCACCCGTAGGGTGGCCA...CCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTACGATCTCAGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SDKGPCAASGAHSELLPPTISAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATCGT...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCAGGGGCACCATGTTGGCCATaGACACGTCGGCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PPSFTFLGICRAPMGAPGAPCWP*TRRRAA
Trigger: TGCGGCGCGCCGACGTGTCCATGGCCAACATGGTGC...CCCTGGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CTCAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGTCTAAGGGCAGTGTCTaGAAGGCTGAAGTCCTACCT +
Preference number: 4 (lower is better)
Translates to: LRARPPAGWCKQAQSEMGSKGSV*KAEVLP
Trigger: AGGTAGGACTTCAGCCTTCCAGACACTGCCCTTAGA...CCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CGTACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGGGCAGGGGAACAGCATaGGAAGGCAGTGTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: RTRNMKSPPKVGVWVPAGGRGTA*EGSVAG
Trigger: TCCCGCAACACTGCCTTCCCATGCTGTTCCCCTGCC...CCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGGGCAGCCACGACCTTTaGAGTCCGGGGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKGSHDL*SPGAAR
Trigger: CCGGGCAGCCCCCGGACTCCAAAGGTCGTGGCTGCC...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTGGATGTAGACGAAGCTaGAGGCCACGTACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SDKGPCAASGAHSELLPPGCRRS*RPRTAA
Trigger: AGCCGCAGTACGTGGCCTTCAGCTTCGTCTACATCC...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTAACGTACACGGAACATaGAGTCCCCTCCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSNVHGT*SPLRRW
Trigger: CCACCTTCGGAGGGGACTTCATGTTCCGTGTACGTT...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp GGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTGCACGCCGGCCTTGTaGGGCTTGAGGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: GDLDIDTLAFGTKGRWETCTPAL*GLRRST
Trigger: CGTGCTGCGCCTCAAGCCGCACAAGGCCGGCGTGCA...GGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAGCCATCCGTGCTGGGTaGCGCGTGCCCGTAGCCGAT +
Preference number: 4 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGAIRAG*RVPVAD
Trigger: ATCGGCTACGGGCACGCGGCACCCAGCACGGATGGC...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCCCAGTGCGACCATTCTaGAGACTGACAGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVPVRPF*RLTGRC
Trigger: GCAGCGGCCTGTCAGTCTGCAGAATGGTCGCACTGG...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGCCTTCAGGTCCCACGTaGAGCCAGTTCCTCCACACT +
Preference number: 4 (lower is better)
Translates to: CQGWPWSAVLRSWQGNSMPSGPT*SQFLHT
Trigger: AGTGTGGAGGAACTGGCTGCACGTGGGACCTGAAGG...CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTTCGCTCAGGCTGGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SDKGPCAASGAHSELLPPSLRLE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCCAGCCTGAGCGA...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGAGGCCAACAAGGAGCTaGCAGGAGTGCTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: CQGWPWSAVLRSWQGNSMRPTRS*QECCHR
Trigger: CCTGTGACAGCACTCCTGGCAGCTCCTTGTTGGCCT...CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGGCACCATGTTGGCCATaGACACGTCGGCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: RHPGFWNQGKVGDLAGQRAPCWP*TRRRAA
Trigger: TGCGGCGCGCCGACGTGTCCATGGCCAACATGGTGC...CCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCAGGGAGGCACAGTCGGAGATaGGGGTGCTGGGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PPSFTFLGICRAPMGAPGRHSRR*GCWGRV
Trigger: CACTCTCCCCCAGCACCCCCATCTCCGACTGTGCCT...CCCTGGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGGAGGGTCTCTGAGGACTaGGAGCTTCTTAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: RPPAGWCKQAQSEMGVLGRVSED*ELLRFS
Trigger: TGAAAATCTAAGAAGCTCCCAGTCCTCAGAGACCCT...CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGGCCTGCCAGCTTTCTTaGCCACTCTGCCCAATTCCC +
Preference number: 4 (lower is better)
Translates to: CQGWPWSAVLRSWQGNSMACQLS*PLCPIP
Trigger: GGGAATTGGGCAGAGTGGCCAAGAAAGCTGGCAGGC...CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTGGAGGGGGTGGGAGATaGCCCCTCCCTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFPLCIFQLTYAGNEGRCGGGGR*PLPGSS
Trigger: GCTGCTGCCAGGGAGGGGCCATCTCCCACCCCCTCC...ACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CAA 72 bp GTGAGCCACTGCACCCAGCCCCCACCCCTTTGCCTTTaGCTCTCTGGTCACTTCACCTGTCCAGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VSHCTQPPPLCL*LSGHFTCPGLS
Trigger: ACTGAGGCCTGGACAGGTGAAGTGACCAGAGAGCAAAAGGCAAAGGGGTGGGGGCTGGGTGCAGTGGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp AGAGAAGGAGCCCACGCTAGAACCTCAGGCAATTCTGAGATCTTAGGAGATGTGCCGTGGACACCGAGCTaGTGGCGGAGCGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: REGAHARTSGNSEILGDVPWTPS*WRSVAP
Trigger: GGGCGCCACGCTCCGCCATCAGCTCGGTGTCCACGG...CACATCTCCTAAGATCTCAGAATTGCCTGAGGTTCTAGCGTGGGCTCCTTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCAGGGCCCTTCTTGGCGCGGTaGAGCAGGTACCTCACCAAG +
Preference number: 4 (lower is better)
Translates to: PPSFTFLGICRAPMGAPGPFLAR*SRYLTK
Trigger: CTTGGTGAGGTACCTGCTGCACCGCGCCAAGAAGGG...CCCTGGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CGTACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGATGGGGATGGAGTACTaGAGCTTCTCGCGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RTRNMKSPPKVGVWVPAGMGMEY*SFSRLL
Trigger: CAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCAT...CCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAGGCGACGAGTGGCTCTaGTCCACGCACGTGTCGGAC +
Preference number: 4 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGGDEWL*STHVSD
Trigger: GTCCGACACGTGCGTGGAGCAGAGCCACTCGTCGCC...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTTGCCAGGATGTACACTaGAGGAGCTTTGCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: QSPASCRLVQAGTVGDGGCQDVH*RSFAFK
Trigger: CTTAAAAGCAAAGCTCCTGCAGTGTACATCCTGGCA...ACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCGGGCCCATTCAGAGCTaGTGCCTCCTGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPGPIQS*CLLAKK
Trigger: CTTCTTGGCCAGGAGGCAGCAGCTCTGAATGGGCCC...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTTCCAATTTCCCTGAATaGCAGGGCTGGCCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: SDKGPCAASGAHSELLPPSNFPE*QGWPWS
Trigger: CGACCAAGGCCAGCCCTGGCATTCAGGGAAATTGGA...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTCCACCCTACGGGTGCTaGCCTCCAATTTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: SDKGPCAASGAHSELLPPPPYGC*PPISLN
Trigger: ATTCAGGGAAATTGGAGGGCAGCACCCGTAGGGTGG...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTTTCAAGCGATTCTCGTaGGTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSFKRFS*VSLLSS
Trigger: GCTACTCAGGAGGCTGACGCACGAGAATCGCTTGAA...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGAGAAGGAGCCCACGCTAGAACCTCAGGCAATTCTGAGATCTTAGGAGATGTGAGGCGGCCTGGGGCATaGCTGCGCTCGCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: REGAHARTSGNSEILGDVRRPGA*LRSPLS
Trigger: GGAGAGCGGCGAGCGCAGCCATGCCCCAGGCCGCCT...CACATCTCCTAAGATCTCAGAATTGCCTGAGGTTCTAGCGTGGGCTCCTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGTGACAAAGGCCCCTGTGCAGCCTCAGGGGCCCATTCAGAGCTGCTGCCTCCTAACACGAAGGGAGGTTaGGAGACACAGCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SDKGPCAASGAHSELLPPNTKGG*ETQLGM
Trigger: CATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTT...AGGAGGCAGCAGCTCTGAATGGGCCCCTGAGGCTGCACAGGGGCCTTTGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTAGCTTTAGGGACTGCTaGGTTTCCACTTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: QSPASCRLVQAGTVGDGGSFRDC*VSTFSI
Trigger: TATGGAGAAAGTGGAAACCCAGCAGTCCCTAAAGCT...ACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CCTCAAGCATCACCTTCGTCAGCTGCGTTCCATCTGGGCTTCTGGGTTGCAGGTGGCAGAGGGCACCTCTaGTCCAAACTCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: PQASPSSAAFHLGFWVAGGRGHL*SKLPHL
Trigger: CAGGTGGGGGAGTTTGGACCAGAGGTGCCCTCTGCC...ACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTGACGAAGGTGATGCTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CAA 72 bp GCAGTGTTGCGGGAGGAGAGGCCCCTCATCCACCCCTaGATGTTGTCCCAGTCATTATACCGGCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AVLREERPLIHP*MLSQSLYRLQL
Trigger: CAGCTGGAGCCGGTATAATGACTGGGACAACATCAAGGGGTGGATGAGGGGCCTCTCCTCCCGCAACACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp AGAGAAGGAGCCCACGCTAGAACCTCAGGCAATTCTGAGATCTTAGGAGATGTGCGTAGCCGCCCTGGCTaGGGTTGTAGCGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: REGAHARTSGNSEILGDVRSRPG*GCSAPA
Trigger: TGCGGGCGCGCTACAACCTCAGCCAGGGCGGCTACG...CACATCTCCTAAGATCTCAGAATTGCCTGAGGTTCTAGCGTGGGCTCCTTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAAGCTCCTGCGCTTCATaGGGCCGCGGAAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGSSCAS*GRGRWT
Trigger: TGTCCACCTTCCGCGGCCTCATGAAGCGCAGGAGCT...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAGACCATTCTGCAGACTaGCAGGCCGCTGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGDHSAD*QAAASC
Trigger: GCAGGAGGCAGCGGCCTGTCAGTCTGCAGAATGGTC...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp CCTCAAGCATCACCTTCGTCAGCTGCGTTCCATCTGGGCTTCTGGGTTGCAGGTGCCCTCCAATTTCCCTaGATGCCAGGGCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PQASPSSAAFHLGFWVAGALQFP*MPGLAL
Trigger: CAAGGCCAGCCCTGGCATTCAGGGAAATTGGAGGGC...ACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTGACGAAGGTGATGCTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACAAGCTGGGGTGGGGCCTaGGGCTGGCCACCCTACGGG +
Preference number: 4 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTSWGGA*GWPPYG
Trigger: CCCGTAGGGTGGCCAGCCTCAGGCCCCACCCCAGCT...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp CAGGAGAAGGAATCCATTCTCCTGGCTGACTGGGAGGTACCACTGTCAGCTGGGAGAGGCTGCCTGCAGTaGAAGGGAGTGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QEKESILLADWEVPLSAGRGCLQ*KGVRGK
Trigger: CTTCCCCCTCACTCCCTTTCACTGCAGGCAGCCTCT...CCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCCCACTCACTGCTGTGTaGCTCAGGCAGGCGATTTGC +
Preference number: 4 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPPLTAV*LRQAIC
Trigger: GCAAATCGCCTGCCTGAGTCACACAGCAGTGAGTGG...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp AGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGGTCTGTCGTAGGTTCTaGGGCCCAGTCCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: RHPGFWNQGKVGDLAGQRVCRRF*GPVPSL
Trigger: CAGGCTTGGGACTGGGCCTCAGAACCTACGACAGAC...CCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACACCGGCGAAGCGCCACTaGACGCCGGCCTTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTPAKRH*TPALCG
Trigger: GCCGCACAAGGCCGGCGTGCAGTGGCGCTTCGCCGG...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp ACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGTATACTGCGGCTGCGTCTaGAGGGCCTGGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TPWLLEPREGGRPSRTEVYCGCV*RAWSFC
Trigger: GCAGAAGGACCAGGCCCTGCAGACGCAGCCGCAGTA...TACCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CAGGAGAAGGAATCCATTCTCCTGGCTGACTGGGAGGTACCACTGTCAGCTGGGCCAGTGCGACCATTCTaGAGACTGACAGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QEKESILLADWEVPLSAGPVRPF*RLTGRC
Trigger: GCAGCGGCCTGTCAGTCTGCAGAATGGTCGCACTGG...CCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCCATGAGACCCAGCCCTaGTTACCTCGGTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVHETQP*LPRSQE
Trigger: TTCTTGGGACCGAGGTAAGCAGGGCTGGGTCTCATG...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGCAGTCTGCCACGCTGTaGCCCACGGCCATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKQSATL*PTAILH
Trigger: GTGCAGAATGGCCGTGGGGCACAGCGTGGCAGACTG...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGAGCGTGCGCACGTTCTaGCGCTTCATCGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKSVRTF*RFIVPL
Trigger: GAGCGGGACGATGAAGCGGCAGAACGTGCGCACGCT...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620977.1
CDS-3UTR CCA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAATGCGTCTGCAGGGCCTaGTCCTTCTGCAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEECVCRA*SFCSAT
Trigger: CGTGGCGCTGCAGAAGGACCAGGCCCTGCAGACGCA...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp TGCCAGGGCTGGCCTTGGTCGGCAGTGTTAAGGAGCTGGCAGGGGAACAGCATGAGGAATCCATTCTCCTaGCTGACTGGGAGGTACCAC +
Preference number: 4 (lower is better)
Translates to: CQGWPWSAVLRSWQGNSMRNPFS*LTGRYH
Trigger: GTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCT...CATGCTGTTCCCCTGCCAGCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp ACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGTACGGCGTTCATGGTCATaGAGCGCAGCACCACGAGGT +
Preference number: 4 (lower is better)
Translates to: TPWLLEPREGGRPSRTEVRRSWS*SAAPRG
Trigger: ACCTCGTGGTGCTGCGCTTCATGACCATGAACGCCG...TACCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp CAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTCCATGGGACACGTTTTaGAAAGAATTGTCGTTACAT +
Preference number: 4 (lower is better)
Translates to: QSPASCRLVQAGTVGDGGPWDTF*KELSLH
Trigger: ATGTAACGACAATTCTTTTCAAAACGTGTCCCATGG...ACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACGTCGGCGCGCCGCATaGCCAGCCCCTTCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: FLHNCKAMQNNTKGGWETRRRAA*PAPSWR
Trigger: GCGCCAAGAAGGGGCTGGGCATGCGGCGCGCCGACG...TGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACAGTGAGCAGCGCGCGGTaGTCGGCGTCGCGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTVSSAR*SASRFS
Trigger: CGAGAAGCGCGACGCCGAGCACCGCGCGCTGCTCAC...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp GGACTGCTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGGTGAGCAGCGCGCGGTaGTCGGCGTCGCGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GLLGFHFLHNCKAMQNNTVSSAR*SASRFS
Trigger: CGAGAAGCGCGACGCCGAGCACCGCGCGCTGCTCAC...CGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAAAGGTGGACAGGCTGTaGAGACCCGTGGACACCGAG +
Preference number: 4 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGKVDRL*RPVDTE
Trigger: CTCGGTGTCCACGGGTCTGCACAGCCTGTCCACCTT...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCACATTTCTCGGAATTTaGAGGGCTCCGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPTFLGI*RAPMGA
Trigger: GGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGT...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCATCACCTTCGTCAGCTaGGTTCCATCTGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVITFVS*VPSGLL
Trigger: CAGAAGCCCAGATGGAACGCAGCTGACGAAGGTGAT...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCACAGGCACGAGCACATaGACTGGAAGTGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPTGTST*TGSAAP
Trigger: AGGTGCTGCACTTCCAGTCCATGTGCTCGTGCCTGT...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAGGGCGGTGTGGGCACTaGGAGAAAGTGTCCCTACTC +
Preference number: 4 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGGRCGH*EKVSLL
Trigger: GAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCC...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGACGGCCTTGTGCGGCTTaGGGCGCAGCACGACGCGCT +
Preference number: 4 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGRPCAA*GAARRA
Trigger: AGCGCGTCGTGCTGCGCCTCAAGCCGCACAAGGCCG...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGACATGCAGAACACCTTaGCGCCATCCGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKTCRTP*RHPCWV
Trigger: CACCCAGCACGGATGGCGGCAAGGTGTTCTGCATGT...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp AGAGAAGGAGCCCACGCTAGAACCTCAGGCAATTCTGAGATCTTAGGAGATGTGCCTCCTGCCGGCTGGTaGAAGCAGGCACAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: REGAHARTSGNSEILGDVPPAGW*KQAQSE
Trigger: CTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGG...CACATCTCCTAAGATCTCAGAATTGCCTGAGGTTCTAGCGTGGGCTCCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CGAGGGGCGGTGTGGGCACTGGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTACATTTCTCGGAATTTaGAGGGCTCCGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RGAVWALGESVPTPTLFITFLGI*RAPMGA
Trigger: GGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGT...AATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCATGTCCCATAGGATATaGCTGCCAGCTTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVMSHRI*LPAFLA
Trigger: GGCCAAGAAAGCTGGCAGGCATATCCTATGGGACAT...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CAGGAGAAGGAATCCATTCTCCTGGCTGACTGGGAGGTACCACTGTCAGCTGGGGGTGCAGTTCACCACTaGTCTGCCCAGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: QEKESILLADWEVPLSAGGAVHH*SAQLSQ
Trigger: TTGTGACAGCTGGGCAGAGCAGTGGTGAACTGCACC...CCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAACACGAGCACATGGACTaGAAGTGCAGCACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEEHEHMD*KCSTSA
Trigger: CGCGGAGGTGCTGCACTTCCAGTCCATGTGCTCGTG...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGCTGATGGCGGAGCGTaGCGCCCCGCTGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGADGGA*RPAAQA
Trigger: TGCCTGTGCAGCGGGGCGCCACGCTCCGCCATCAGC...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp TTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGCTGATGGCGGAGCGTaGCGCCCCGCTGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: FHFLHNCKAMQNNTKGGWADGGA*RPAAQA
Trigger: TGCCTGTGCAGCGGGGCGCCACGCTCCGCCATCAGC...CCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp TTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACTGTGCGGGGTCCCACTaGGCAGAAGGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FSITAKPCKTTRREVGRHCAGSH*AEGSRG
Trigger: GCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACA...GTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp GGTGTGGTCGTGAGGGCATGGTCACCCACACATATTGCATATTCTGTGGCAGTGTACCGGCTCCAGCTGTaGGGCCCCAAAAGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GVVVRAWSPTHIAYSVAVYRLQL*GPKSEP
Trigger: AGGCTCACTTTTGGGGCCCCACAGCTGGAGCCGGTA...CACTGCCACAGAATATGCAATATGTGTGGGTGACCATGCCCTCACGACCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGATGACAGAGGCAGCTaGAGCCTGAGCCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEEDDRGS*SLSLVS
Trigger: GGAGACCAGGCTCAGGCTCCAGCTGCCTCTGTCATC...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CAGGAGAAGGAATCCATTCTCCTGGCTGACTGGGAGGTACCACTGTCAGCTGGGGGAGCTGGCACCAGATaGATAAGGTGGGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QEKESILLADWEVPLSAGGAGTR*IRWVCS
Trigger: AGAGCAGACCCACCTTATCCATCTGGTGCCAGCTCC...CCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGGCTGTGTCCTGCCTCTaGGGGCAGGGAGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWAVSCL*GQGVQV
Trigger: CACCTGCACTCCCTGCCCCCAGAGGCAGGACACAGC...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CAA 72 bp TCTGCCACTCACTGCTGTGTGACTCAGGCAGGCGATTaGCTCTCTGTGGGCCTCAGTTACTCATGTACGGGG +
Preference number: 4 (lower is better)
Translates to: SATHCCVTQAGD*LSVGLSYSCTG
Trigger: CCCCGTACATGAGTAACTGAGGCCCACAGAGAGCAAATCGCCTGCCTGAGTCACACAGCAGTGAGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GGTGTGGTCGTGAGGGCATGGTCACCCACACATATTGCATATTCTGTGGCAGTGAGAGGTCCCGCGGGATaGTCATGGGGATGGAGTACT +
Preference number: 4 (lower is better)
Translates to: GVVVRAWSPTHIAYSVAVRGPAG*SWGWST
Trigger: AGTACTCCATCCCCATGATCATCCCGCGGGACCTCT...CACTGCCACAGAATATGCAATATGTGTGGGTGACCATGCCCTCACGACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCGTGCGCACGTTCTaGCGCTTCATCGTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: FSITAKPCKTTRREVGRHSVRTF*RFIVPP
Trigger: GGGCGGGACGATGAAGCGGCAGAACGTGCGCACGCT...GTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGTGCACGCCGGCCTTGTaGGGCTTGAGGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: FHFLHNCKAMQNNTKGGWCTPAL*GLRRST
Trigger: CGTGCTGCGCCTCAAGCCGCACAAGGCCGGCGTGCA...CCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACACTGAAGGCCACGTACTaGGGCTGCGTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTLKATY*GCVCRA
Trigger: GGCCCTGCAGACGCAGCCGCAGTACGTGGCCTTCAG...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp GGACTGCTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGCTGAAGGCCACGTACTaGGGCTGCGTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLLGFHFLHNCKAMQNNTLKATY*GCVCRA
Trigger: GGCCCTGCAGACGCAGCCGCAGTACGTGGCCTTCAG...CGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACAGCTCGCCCCTCCTGCTaGCTGCCTGTCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTARPSC*LPVPPS
Trigger: AGAAGGAGGGACAGGCAGGCAGCAGGAGGGGCGAGC...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGCCCATTCAGAGCTGCTaGCTCCTGGCCAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKPIQSC*LLAKKR
Trigger: TCTCTTCTTGGCCAGGAGGCAGCAGCTCTGAATGGG...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCAGGGTATTCTGTGGCAGTGTaGCCAGGCATAAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: PPSFTFLGICRAPMGAPGYSVAV*PGIRHW
Trigger: CCAATGCCTTATGCCTGGGCACACTGCCACAGAATA...CCCTGGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTTGTCCAGGCGGACTGTaGAGTCTGTGTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SFPLCIFQLTYAGNEGRCCPGGL*SLCEDG
Trigger: CCCATCCTCACACAGACTGCACAGTCCGCCTGGACA...ACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGTCTGGGGGCAGGGAGTaGAGGTGCCATCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKSGGRE*RCHHFF
Trigger: GAAGAAATGATGGCACCTGCACTCCCTGCCCCCAGA...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CGAGGGGCGGTGTGGGCACTGGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTACCAGATGGATAAGGTaGGTCTGCTCTCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: RGAVWALGESVPTPTLFITRWIR*VCSHGL
Trigger: CAGACCGTGAGAGCAGACCCACCTTATCCATCTGGT...AATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAAACGTACACGGAACATaGAGTCCCCTCCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEENVHGT*SPLRRW
Trigger: CCACCTTCGGAGGGGACTTCATGTTCCGTGTACGTT...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGCAGTGTCTGGAAGGCTaGAGTCCTACCTGCTATGAG +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKQCLEG*SPTCYE
Trigger: CTCATAGCAGGTAGGACTTCAGCCTTCCAGACACTG...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCCAATGGTGCCAGGTGTaGTGTCCCATAGGATATGCC +
Preference number: 4 (lower is better)
Translates to: GDLDIDTLAFGTKGRWETQWCQV*CPIGYA
Trigger: GGCATATCCTATGGGACATCACACCTGGCACCATTG...GGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAATCCATTCTCCTGGCTaGCTGGGAGGTACCACTGTC +
Preference number: 4 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEEIHSPG*LGGTTV
Trigger: GACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGAT...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCGTAAGCCTCAGATTTTaGTGTGGTGGCCTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPVSLRF*CGGLRS
Trigger: ACTCCTAAGGCCACCACATCAAAATCTGAGGCTTAC...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGCCCTTCTTGGCGCGGTaGAGCAGGTACCTCACCAAG +
Preference number: 4 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWPFLAR*SRYLTK
Trigger: CTTGGTGAGGTACCTGCTGCACCGCGCCAAGAAGGG...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAATGGGGATGGAGTACTaGAGCTTCTCGCGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEEMGMEY*SFSRLL
Trigger: CAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCAT...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp TTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACAGGCGACGAGTGGCTCTaGTCCACGCACGTGTCGGAC +
Preference number: 4 (lower is better)
Translates to: FLHNCKAMQNNTKGGWETGDEWL*STHVSD
Trigger: GTCCGACACGTGCGTGGAGCAGAGCCACTCGTCGCC...TGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp CGTACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGATAACTGCAAAGCCATaGAAAACAACACGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTRNMKSPPKVGVWVPAGITAKP*KTTRRE
Trigger: CTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTAT...CCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCGTCACCCACACATATTaGATATTCTGTGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVVTHTY*IFCGSV
Trigger: CACACTGCCACAGAATATGCAATATGTGTGGGTGAC...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAAACACGAAGGGAGGTTaGGAGACACAGCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEENTKGG*ETQLGM
Trigger: CATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTT...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp AGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTCCAAACTCCCCCACCTaGGAAGGGTGTTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SFPLCIFQLTYAGNEGRCPNSPT*EGCFLL
Trigger: CAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGG...ACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp TTCCTCCCTGACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATCAGCTGCGTTCCATCTaGGCTTCTGGGTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLPDPTKFHISRNLQGSDQLRSI*ASGLQV
Trigger: CACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTG...ATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTCAGGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAGTGGTCGTGAGGGCATaGTCACCCACACATATTGCA +
Preference number: 4 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGVVVRA*SPTHIA
Trigger: TGCAATATGTGTGGGTGACCATGCCCTCACGACCAC...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CAA 72 bp TCTGGTCCAAACTCCCCCACCTGGGAAGGGTGTTTCTaGCTGCAGCCTCAGCTTATCACTAGCTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: SGPNSPTWEGCF*LQPQLITSYLG
Trigger: TCCCAAGTAGCTAGTGATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCCAGGTGGGGGAGTTTGGACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp CATCAAAGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCCAGTTCCTCCACACTaGGACGGGACTCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: HQSFPLCIFQLTYAGNEGPVPPH*DGTHKQ
Trigger: CTGCTTGTGAGTCCCGTCTCAGTGTGGAGGAACTGG...CCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCCGTCGGCGCGCCGCATaGCCAGCCCCTTCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: FAARLFITFIKLRCLAKLRRRAA*PAPSWR
Trigger: GCGCCAAGAAGGGGCTGGGCATGCGGCGCGCCGACG...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAACCCATAGGATATGCCTaGCAGCTTTCTTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEEPIGYA*QLSWPL
Trigger: GAGTGGCCAAGAAAGCTGGCAGGCATATCCTATGGG...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACATCTGGGCTTCTGGGTTaGAGGTGTGGTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTSGLLG*RCGGQR
Trigger: CCTCTGCCCACCACACCTGCAACCCAGAAGCCCAGA...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGCCAGGGGGCCCCTACTaGAGGAGAAGGAATCCATTC +
Preference number: 4 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWPGGPY*RRRNPF
Trigger: GAATGGATTCCTTCTCCTGCAGTAGGGGCCCCCTGG...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAAAGCCCCCTGAGGGCTaGAGGCCAACAAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGKPPEG*RPTRSC
Trigger: GCAGCTCCTTGTTGGCCTGCAGCCCTCAGGGGGCTT...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACACACGAGCACATGGACTaGAAGTGCAGCACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTHEHMD*KCSTSA
Trigger: CGCGGAGGTGCTGCACTTCCAGTCCATGTGCTCGTG...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAAGGCACAGTCGGAGATaGGGGTGCTGGGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGRHSRR*GCWGRV
Trigger: CACTCTCCCCCAGCACCCCCATCTCCGACTGTGCCT...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp TTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACAAGTCCCCTCCGAAGGTaGGGGTCTGGGTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: FLHNCKAMQNNTKGGWETSPLRR*GSGYQQ
Trigger: CTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACT...TGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp CCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCAGGGAGCTTTAGGGACTGCTaGGTTTCCACTTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: PPSFTFLGICRAPMGAPGSFRDC*VSTFSI
Trigger: TATGGAGAAAGTGGAAACCCAGCAGTCCCTAAAGCT...CCCTGGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGCTATGTCACCTAGGCTaGTCTCAAATTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKLCHLG*SQIPGL
Trigger: GAGCCCAGGAATTTGAGACCAGCCTAGGTGACATAG...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CAGGAGAAGGAATCCATTCTCCTGGCTGACTGGGAGGTACCACTGTCAGCTGGGAAGAGCAGGCCAAGCTaGAAGGAAAGAACACTTTGG +
Preference number: 4 (lower is better)
Translates to: QEKESILLADWEVPLSAGKSRPS*KERTLW
Trigger: CCAAAGTGTTCTTTCCTTCCAGCTTGGCCTGCTCTT...CCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp TTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACTGCCAGGGCTGGCCTTaGTCGGCAGTGTTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: FSITAKPCKTTRREVGRHCQGWP*SAVLRS
Trigger: GCTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCA...GTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CATCAAAGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGTTCTCTCCGCAGCTTTaGTTGTGGCTCCCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: HQSFPLCIFQLTYAGNEGFSPQL*LWLPRD
Trigger: GTCCCGAGGGAGCCACAACCAAAGCTGCGGAGAGAA...CCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CAGGAGAAGGAATCCATTCTCCTGGCTGACTGGGAGGTACCACTGTCAGCTGGGGCGATTTGCTCTCTGTaGGCCTCAGTTACTCATGTA +
Preference number: 4 (lower is better)
Translates to: QEKESILLADWEVPLSAGAICSL*ASVTHV
Trigger: TACATGAGTAACTGAGGCCCACAGAGAGCAAATCGC...CCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp TTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACGGTACCACTGTCAGCTaGGGTGTGTCCAGGCGGACT +
Preference number: 4 (lower is better)
Translates to: FSITAKPCKTTRREVGRHGTTVS*GVSRRT
Trigger: AGTCCGCCTGGACACACCCCAGCTGACAGTGGTACC...GTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CAA 72 bp GGTGTGATGTCCCATAGGATATGCCTGCCAGCTTTCTaGGCCACTCTGCCCAATTCCCAAATTCCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: GVMSHRICLPAF*ATLPNSQIPRA
Trigger: GGCTCTAGGAATTTGGGAATTGGGCAGAGTGGCCAAGAAAGCTGGCAGGCATATCCTATGGGACATCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp TTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGACCCAGCAGAGACTaGACAGTCTGCCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: FSITAKPCKTTRREVGRHRPSRD*TVCHAV
Trigger: CACAGCGTGGCAGACTGTTCAGTCTCTGCTGGGTCT...GTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TCTGCAGGTATTAAACCATTAGCAGGTAGAGACATCAATTTAGTGGATCGTGACGCCATCCGTGCTGGGTaGCGCGTGCCCGTAGCCGAT +
Preference number: 4 (lower is better)
Translates to: SAGIKPLAGRDINLVDRDAIRAG*RVPVAD
Trigger: ATCGGCTACGGGCACGCGGCACCCAGCACGGATGGC...GTCACGATCCACTAAATTGATGTCTCTACCTGCTAATGGTTTAATACCTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp ACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGTATCCTTCTTTCTGTCCTaGTTTCTGGGGACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: TPWLLEPREGGRPSRTEVSFFLS*FLGTSF
Trigger: AAAGCTGGTCCCCAGAAAGCAGGACAGAAAGAAGGA...TACCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp TTTCTTAGTCTGTTCCAAGGGGACTTAAGAAAATCTGGATCTTCTGGGAAATCCCCAGCTCGCCCCTCCTaGTGCCTGCCTGTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLSLFQGDLRKSGSSGKSPARPS*CLPVPP
Trigger: AGGAGGGACAGGCAGGCAGCAGGAGGGGCGAGCTGG...GGATTTCCCAGAAGATCCAGATTTTCTTAAGTCCCCTTGGAACAGACTAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACAAGATCCTGGCCTTTCTaGCATGAGACCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTRSWPF*HETQPC
Trigger: GCAGGGCTGGGTCTCATGGCAGAAAGGCCAGGATCT...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGGCAGTGTTAAGGAGCTaGCAGGGGAACAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWAVLRS*QGNSMG
Trigger: TCCCATGCTGTTCCCCTGCCAGCTCCTTAACACTGC...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp TTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACGGGGATGGCATCATCTaGAGAGAAGGAGCCCACGCT +
Preference number: 4 (lower is better)
Translates to: FSITAKPCKTTRREVGRHGDGII*REGAHA
Trigger: AGCGTGGGCTCCTTCTCTCCAGATGATGCCATCCCC...GTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGGCGCCATTCTCAGTGTaGAGACAGATAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWAPFSV*RQIGRK
Trigger: CTTCCTGCCTATCTGTCTTCACACTGAGAATGGCGC...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp CAGGAGAAGGAATCCATTCTCCTGGCTGACTGGGAGGTACCACTGTCAGCTGGGAAAGAAAGGTGCTTGTaGTGCACTCTCCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: QEKESILLADWEVPLSAGKERCL*CTLLQR
Trigger: TCTTTGAAGGAGAGTGCATCACAAGCACCTTTCTTT...CCCAGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAATGGATTCCTTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAAACCTCAGGCAATTCTaGGATCTTAGGAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGNLRQF*DLRRCE
Trigger: CTCACATCTCCTAAGATCTCAGAATTGCCTGAGGTT...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GGTGTGGTCGTGAGGGCATGGTCACCCACACATATTGCATATTCTGTGGCAGTGACTTCTATTTCCATCTaGTGCTCACCCCGAGTAACC +
Preference number: 4 (lower is better)
Translates to: GVVVRAWSPTHIAYSVAVTSISI*CSPRVT
Trigger: GGTTACTCGGGGTGAGCATCAGATGGAAATAGAAGT...CACTGCCACAGAATATGCAATATGTGTGGGTGACCATGCCCTCACGACCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CCTCAAGCATCACCTTCGTCAGCTGCGTTCCATCTGGGCTTCTGGGTTGCAGGTATAACTGCAAAGCCATaGAAAACAACACGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PQASPSSAAFHLGFWVAGITAKP*KTTRRE
Trigger: CTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTAT...ACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTGACGAAGGTGATGCTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGAGTTCACCACTGCTCTaGCCAGCTGTCACAATGCTG +
Preference number: 4 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWSSPLL*PAVTML
Trigger: CAGCATTGTGACAGCTGGGCAGAGCAGTGGTGAACT...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGAAGGAAAGAACACTTTaGCTAGCAACAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKKERTL*LATSRL
Trigger: CAGCCTGCTTGTTGCTAGCCAAAGTGTTCTTTCCTT...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp TTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGTTCCATCTGGGCTTCTaGGTTGCAGGTGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FHFLHNCKAMQNNTKGGWFHLGF*VAGVVG
Trigger: GCCCACCACACCTGCAACCCAGAAGCCCAGATGGAA...CCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CATCAAAGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGATTCTCCTGGCTGACTaGGAGGTACCACTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: HQSFPLCIFQLTYAGNEGILLAD*EVPLSA
Trigger: AGCTGACAGTGGTACCTCCCAGTCAGCCAGGAGAAT...CCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCTTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp GGACTGCTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAAGACAGAGGCAGGTaGGACAGGGCAGTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: GLLGFHFLHNCKAMQNNTKDRGR*DRAVSL
Trigger: GAGGCTTACTGCCCTGTCCCACCTGCCTCTGTCTTT...CGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp GGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCAAATCAGCGGGGATCTaGGTATATTTATACCCCACC +
Preference number: 4 (lower is better)
Translates to: GDLDIDTLAFGTKGRWETKSAGI*VYLYPT
Trigger: GGTGGGGTATAAATATACCCAGATCCCCGCTGATTT...GGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGCTTCCCTCTCTGTATCTTTCAGTTGACCTATGCGGGTAACGAGGGGCGGTGTTCCCTCTTTCTCTCTTaGCCCCCGGAAACTTCTATT +
Preference number: 4 (lower is better)
Translates to: SFPLCIFQLTYAGNEGRCSLFLS*PPETSI
Trigger: AATAGAAGTTTCCGGGGGCCAAGAGAGAAAGAGGGA...ACACCGCCCCTCGTTACCCGCATAGGTCAACTGAAAGATACAGAGAGGGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGAGGCCAGTTAGCTTaGACCTCCAGTGCGACCATT +
Preference number: 4 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGGGQLA*TSSATI
Trigger: AATGGTCGCACTGGAGGTTCAAGCTAACTGGCCTCC...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp TTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACAACTGTGCAGTCTGTGTaGGGATGGGGAGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: FLHNCKAMQNNTKGGWETTVQSV*GWGALE
Trigger: TTCCAGTGCTCCCCATCCTCACACAGACTGCACAGT...TGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GGACTGCTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGGTGGATTGTACTCTATaGAGTCCGGGGGTCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GLLGFHFLHNCKAMQNNTVDCTL*SPGVAV
Trigger: TACAGCGACCCCCGGACTTCATAGAGTACAATCCAC...CGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp TTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGTCACAATGCTaGTCACCCCTAGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: FLHNCKAMQNNTKGGWETQLSQC*SPLGRW
Trigger: CCATCTCCCTAGGGGTGATCAGCATTGTGACAGCTG...TGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTCCTCCCTGACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATTCCTTCTTTCTGTCCTaGTTTCTGGGGACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FLPDPTKFHISRNLQGSDSFFLS*FLGTSF
Trigger: AAAGCTGGTCCCCAGAAAGCAGGACAGAAAGAAGGA...ATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTCAGGGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGCTCGGTCCCAAGAACTaGACTGTTTGTAAGCATGCG +
Preference number: 4 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWLGPKN*TVCKHA
Trigger: CGCATGCTTACAAACAGTGCAGTTCTTGGGACCGAG...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp TTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACAACAGGCACGAGCACATaGACTGGAAGTGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: FLHNCKAMQNNTKGGWETTGTST*TGSAAP
Trigger: AGGTGCTGCACTTCCAGTCCATGTGCTCGTGCCTGT...TGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR TCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCAGCTCCTGCGCTTCATaGGGCCGCGGAAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: FAARLFITFIKLRCLAKLSSCAS*GRGRWT
Trigger: TGTCCACCTTCCGCGGCCTCATGAAGCGCAGGAGCT...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp AGAGAAGGAGCCCACGCTAGAACCTCAGGCAATTCTGAGATCTTAGGAGATGTGCTGATCCGGGACTTCTaGTTCTGGTTTAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: REGAHARTSGNSEILGDVLIRDF*FWFKTQ
Trigger: CTGGGTTTTAAACCAGAATCAGAAGTCCCGGATCAG...CACATCTCCTAAGATCTCAGAATTGCCTGAGGTTCTAGCGTGGGCTCCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGCTGGAGTACAGTGGTaGAATCAGGGCTCACTACAG +
Preference number: 4 (lower is better)
Translates to: FHFLHNCKAMQNNTKGGWAGVQW*NQGSLQ
Trigger: CTGTAGTGAGCCCTGATTGCACCACTGTACTCCAGC...CCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGACAGGTAGCCACACAATaGCAGGATGTACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGQVATQ*QDVHCR
Trigger: CCTGCAGTGTACATCCTGGCATTGTGTGGCTACCTG...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp GGACTGCTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGTTCTGTCCTGCTTTCTaGGGACCAGCTTTAGGGACT +
Preference number: 4 (lower is better)
Translates to: GLLGFHFLHNCKAMQNNTFCPAF*GPALGT
Trigger: AGTCCCTAAAGCTGGTCCCCAGAAAGCAGGACAGAA...CGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp TCTGCAGGTATTAAACCATTAGCAGGTAGAGACATCAATTTAGTGGATCGTGACTCTGGGTTGCAGGTGTaGTGGGCAGAGGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: SAGIKPLAGRDINLVDRDSGLQV*WAEGTS
Trigger: AGAGGTGCCCTCTGCCCACCACACCTGCAACCCAGA...GTCACGATCCACTAAATTGATGTCTCTACCTGCTAATGGTTTAATACCTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp ACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGTAGGACTTAAGAAAATCTaGATCTTCTGGGAAATCCCA +
Preference number: 4 (lower is better)
Translates to: TPWLLEPREGGRPSRTEVGLKKI*IFWEIP
Trigger: TGGGATTTCCCAGAAGATCCAGATTTTCTTAAGTCC...TACCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGACAATTTAGTGGATCGTaGCCAGCATTTTATAACATG +
Preference number: 4 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGQFSGS*PAFYNM
Trigger: CATGTTATAAAATGCTGGTCACGATCCACTAAATTG...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTTCTTAGTCTGTTCCAAGGGGACTTAAGAAAATCTGGATCTTCTGGGAAATCCACATGCAGAACACCTTaGCGCCATCCGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLSLFQGDLRKSGSSGKSTCRTP*RHPCWV
Trigger: CACCCAGCACGGATGGCGGCAAGGTGTTCTGCATGT...GGATTTCCCAGAAGATCCAGATTTTCTTAAGTCCCCTTGGAACAGACTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAACCAGCTTTAGGGACTaGTGGGTTTCCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGTSFRD*WVSTFS
Trigger: GGAGAAAGTGGAAACCCAGCAGTCCCTAAAGCTGGT...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR GCA 90 bp TTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGACCAGCTTTAGGGACTaGTGGGTTTCCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FHFLHNCKAMQNNTKGGWTSFRD*WVSTFS
Trigger: GGAGAAAGTGGAAACCCAGCAGTCCCTAAAGCTGGT...CCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CCA 90 bp TCTGCAGGTATTAAACCATTAGCAGGTAGAGACATCAATTTAGTGGATCGTGACAGGGGGAAGCAACACTaGCCTTCCAGGTCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: SAGIKPLAGRDINLVDRDRGKQH*PSRSLG
Trigger: TCCTAGGGACCTGGAAGGCCAGTGTTGCTTCCCCCT...GTCACGATCCACTAAATTGATGTCTCTACCTGCTAATGGTTTAATACCTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAAAAATCTGGATCTTCTaGGAAATCCCAAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEEKIWIF*EIPKGK
Trigger: CTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTT...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCGAGCAGGGACATGGGTaGAGTTCACCACTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FAARLFITFIKLRCLAKLEQGHG*SSPLLC
Trigger: GCAGAGCAGTGGTGAACTGCACCCATGTCCCTGCTC...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCCTCAGCAGTGCCCTCTaGTCCGGGACTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: FAARLFITFIKLRCLAKLLSSAL*SGTSDS
Trigger: AGAATCAGAAGTCCCGGATCAGAGGGCACTGCTGAG...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGACTTTCTTGGCCACTCTaGCCAATTCCCAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGLSWPL*PIPKFL
Trigger: TAGGAATTTGGGAATTGGGCAGAGTGGCCAAGAAAG...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACAAAGGGTGTTTCTTGCTaGAGCCTCAGCTTATCACTA +
Preference number: 4 (lower is better)
Translates to: FLHNCKAMQNNTKGGWETKGVSC*SLSLSL
Trigger: TAGTGATAAGCTGAGGCTGCAGCAAGAAACACCCTT...TGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp TTTCTTAGTCTGTTCCAAGGGGACTTAAGAAAATCTGGATCTTCTGGGAAATCCCCCTCATCCACCCCTTaGTGTTGTCCCAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: FLSLFQGDLRKSGSSGKSPSSTP*CCPSHY
Trigger: ATAATGACTGGGACAACATCAAGGGGTGGATGAGGG...GGATTTCCCAGAAGATCCAGATTTTCTTAAGTCCCCTTGGAACAGACTAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CCA 90 bp CTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGATTATCACTAGCTACTTaGGACACAGGCACCAACAAT +
Preference number: 4 (lower is better)
Translates to: LGFHFLHNCKAMQNNTKGLSLAT*DTGTNN
Trigger: ATTGTTGGTGCCTGTGTCCCAAGTAGCTAGTGATAA...TCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CAA 72 bp TTTGAAAAGAATTGTCGTTACATCCCTCTTTCTCTCTaGGCCCCCGGAAACTTCTATTTCCATCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: FEKNCRYIPLSL*APGNFYFHLML
Trigger: GAGCATCAGATGGAAATAGAAGTTTCCGGGGGCCAAGAGAGAAAGAGGGATGTAACGACAATTCTTTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
3UTR CAA 72 bp CTAAGATGCCTTGCGAAGCTCCATGAGTCGGTGATATaGACAGCATTTTCCCAAATTCATTTGACCAACGAA +
Preference number: 4 (lower is better)
Translates to: LRCLAKLHESVI*TAFSQIHLTNE
Trigger: TTCGTTGGTCAAATGAATTTGGGAAAATGCTGTCAATATCACCGACTCATGGAGCTTCGCAAGGCATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR GCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCTCTTTTAGTGCAGGATaGCTCAGATGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: FAARLFITFIKLRCLAKLSFSAG*LRCCVE
Trigger: TTCCACACAGCATCTGAGGCATCCTGCACTAAAAGA...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR TCA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCCTAAGTAGGGTTTTGTaGGACTCAAAGGAATCAGTG +
Preference number: 4 (lower is better)
Translates to: FAARLFITFIKLRCLAKLLSRVL*DSKESV
Trigger: CACTGATTCCTTTGAGTCTCACAAAACCCTACTTAG...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS GCA 90 bp CCTCCGCCGCCGCCCGCCTGCCCGTTGCGCGTGAGCAGCGCGCGGTaGTCGGCGTCGCGCTTCTCGTCCTCGGCGTTCATGGTCATGAAG +
Preference number: 5 (lower is better)
Translates to: PPPPPACPLRVSSAR*SASRFSSSAFMVMK
Trigger: CTTCATGACCATGAACGCCGAGGACGAGAAGCGCGACGCCGAGCACCGCGCGCTGCTCACGCGCAACGGGCAGGCGGGCGGCGGCGGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp CAGAGCCCGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTCCGGCCTTGTGCGGCTaGAGGCGCAGCACGACGCGC +
Preference number: 5 (lower is better)
Translates to: QSPASCRLVQAGTVGDGGPALCG*RRSTTR
Trigger: GCGCGTCGTGCTGCGCCTCAAGCCGCACAAGGCCGG...ACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCGGGCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS CCA 90 bp GGACAGGCTGTGCAGACCCGTGGACACCGAGCTGATGGCGGAGCGTaGCGCCCCGCTGCACAGGCAGCGTCGCGAGGGCGTGTCGCTGTA +
Preference number: 5 (lower is better)
Translates to: GQAVQTRGHRADGGA*RPAAQAASRGRVAV
Trigger: TACAGCGACACGCCCTCGCGACGCTGCCTGTGCAGCGGGGCGCCACGCTCCGCCATCAGCTCGGTGTCCACGGGTCTGCACAGCCTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS GCA 90 bp GGCACGAGCACATGGACTGGAAGTGCAGCACCTCCGCGTAGACGTTaGGGAAGCCGCCGCCGCCCGCTGCCGCCGTGGATGAGGCGGTGT +
Preference number: 5 (lower is better)
Translates to: GTSTWTGSAAPPRRR*GSRRRPLPPWMRRC
Trigger: ACACCGCCTCATCCACGGCGGCAGCGGGCGGCGGCGGCTTCCGCAACGTCTACGCGGAGGTGCTGCACTTCCAGTCCATGTGCTCGTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS GCA 90 bp ACGGAGCTCCTGCGCTTCATGAGGCCGCGGAAGGTGGACAGGCTGTaGAGACCCGTGGACACCGAGCTGATGGCGGAGCGTGGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: TELLRFMRPRKVDRL*RPVDTELMAERGAP
Trigger: CGGGGCGCCACGCTCCGCCATCAGCTCGGTGTCCACGGGTCTGCACAGCCTGTCCACCTTCCGCGGCCTCATGAAGCGCAGGAGCTCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp CGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGGCCGATGAGCACCATGTaGGCCATGGACACGTCGGCG +
Preference number: 5 (lower is better)
Translates to: RPPAGWCKQAQSEMGVLGPMSTM*AMDTSA
Trigger: CGCCGACGTGTCCATGGCCAACATGGTGCTCATCGG...CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp CGGCCTCCTGCCGGCTGGTGCAAGCAGGCACAGTCGGAGATGGGGGTGCTGGGGAGCTTCTCGCGGCTCTaGTACCACAGGCACGAGCAC +
Preference number: 5 (lower is better)
Translates to: RPPAGWCKQAQSEMGVLGSFSRL*YHRHEH
Trigger: GTGCTCGTGCCTGTGGTACAAGAGCCGCGAGAAGCT...CCCCAGCACCCCCATCTCCGACTGTGCCTGCTTGCACCAGCCGGCAGGAGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS TCA 90 bp GGCTCTGCTCCACGCACGTGTCGGACGTGGAGAGGTCCCGCGGGATaGTCATGGGGATGGAGTACTGCAGCTTCTCGCGGCTCTTGTACC +
Preference number: 5 (lower is better)
Translates to: GSAPRTCRTWRGPAG*SWGWSTAASRGSCT
Trigger: GGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCGGGACCTCTCCACGTCCGACACGTGCGTGGAGCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp ACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGTACCGGCCTTGTGCGGCTaGAGGCGCAGCACGACGCGC +
Preference number: 5 (lower is better)
Translates to: TPWLLEPREGGRPSRTEVPALCG*RRSTTR
Trigger: GCGCGTCGTGCTGCGCCTCAAGCCGCACAAGGCCGG...TACCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGCACTGCACGCCGGCCTaGTGCGGCTTGAGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKHCTPA*CGLRRS
Trigger: GCTGCGCCTCAAGCCGCACAAGGCCGGCGTGCAGTG...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS GCA 90 bp TCGGACGTGGAGAGGTCCCGCGGGATGATCATGGGGATGGAGTACTaGAGCTTCTCGCGGCTCTTGTACCACAGGCACGAGCACATGGAC +
Preference number: 5 (lower is better)
Translates to: SDVERSRGMIMGMEY*SFSRLLYHRHEHMD
Trigger: GTCCATGTGCTCGTGCCTGTGGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCGGGACCTCTCCACGTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS CCA 90 bp AGTACTGCAGCTTCTCGCGGCTCTTGTACCACAGGCACGAGCACATaGACTGGAAGTGCAGCACCTCCGCGTAGACGTTGCGGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: STAASRGSCTTGTST*TGSAAPPRRRCGSR
Trigger: GCGGCTTCCGCAACGTCTACGCGGAGGTGCTGCACTTCCAGTCCATGTGCTCGTGCCTGTGGTACAAGAGCCGCGAGAAGCTGCAGTACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp CCTCAAGCATCACCTTCGTCAGCTGCGTTCCATCTGGGCTTCTGGGTTGCAGGTATGCCCAGCCCCTTCTaGGCGCGGTGCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PQASPSSAAFHLGFWVAGMPSPF*ARCSRY
Trigger: GTACCTGCTGCACCGCGCCAAGAAGGGGCTGGGCAT...ACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTGACGAAGGTGATGCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp AGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAATGCCCAGCCCCTTCTaGGCGCGGTGCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SHAKQHEGRLGDTAGDEEMPSPF*ARCSRY
Trigger: GTACCTGCTGCACCGCGCCAAGAAGGGGCTGGGCAT...TTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp GGGCTGAGTAGGGGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGACCGATGAGCACCATGTaGGCCATGGACACGTCGGCG +
Preference number: 5 (lower is better)
Translates to: GLSRGDLDIDTLAFGTKGPMSTM*AMDTSA
Trigger: CGCCGACGTGTCCATGGCCAACATGGTGCTCATCGG...TCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp AGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGAGCTTCTCGCGGCTCTaGTACCACAGGCACGAGCAC +
Preference number: 5 (lower is better)
Translates to: RHPGFWNQGKVGDLAGQRSFSRL*YHRHEH
Trigger: GTGCTCGTGCCTGTGGTACAAGAGCCGCGAGAAGCT...CCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp CGAGGGGCGGTGTGGGCACTGGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTCTTCTCTCCGCAGCTTaGGTTGTGGCTCCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: RGAVWALGESVPTPTLFILLSAA*VVAPSG
Trigger: TCCCGAGGGAGCCACAACCAAAGCTGCGGAGAGAAG...AATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp TTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGCACTGCACGCCGGCCTaGTGCGGCTTGAGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: FHFLHNCKAMQNNTKGGWHCTPA*CGLRRS
Trigger: GCTGCGCCTCAAGCCGCACAAGGCCGGCGTGCAGTG...CCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp GCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACAGCTGGGGATGAGGAAGCAACACGAAGGGAGGTaGGGAGACACAGCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: AMQNNTKGGWETQLGMRKQHEGR*GDTAGD
Trigger: ATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTG...CTTCCTCATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp CCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCAGGGTGGGAAGGGTGTTTCTaGCTGCAGCCTCAGCTTATC +
Preference number: 5 (lower is better)
Translates to: PPSFTFLGICRAPMGAPGWEGCF*LQPQLI
Trigger: GATAAGCTGAGGCTGCAGCAAGAAACACCCTTCCCA...CCCTGGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp TTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGTGGCAGCCACGACCTTaGGAGTCCGGGGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: FHFLHNCKAMQNNTKGGWWQPRP*ESGGCP
Trigger: CGGGCAGCCCCCGGACTCCAAAGGTCGTGGCTGCCA...CCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp ACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCTAGCAGGACAGAGGTACTGAGTAGGGGTGACTaGGACATAGACACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: TPWLLEPREGGRPSRTEVLSRGD*DIDTLA
Trigger: AGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAG...TACCTCTGTCCTGCTAGGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp AGTGGTGAGGGATGTTGTGCGGGGTCCCACTGGGCAGAAGGCAGCAGGGGCAGTAACGTATTAGAATCATaGGCTGTAGCAGGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: SGEGCCAGSHWAEGSRGSNVLES*AVAGLL
Trigger: TAGCAACCCTGCTACAGCCAATGATTCTAATACGTT...ACTGCCCCTGCTGCCTTCTGCCCAGTGGGACCCCGCACAACATCCCTCACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp TACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGTCCTCTGTATCTTTCAGTaGACCTATGCGGGTAACGAG +
Preference number: 5 (lower is better)
Translates to: YTEHEVPSEGGGLGTSRVLCIFQ*TYAGNE
Trigger: CTCGTTACCCGCATAGGTCAACTGAAAGATACAGAG...GACCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp CGTACACGGAACATGAAGTCCCCTCCGAAGGTGGGGGTCTGGGTACCAGCAGGGAAAATAAGAGTCACCTaGAACTGGTCATTGCCAACC +
Preference number: 5 (lower is better)
Translates to: RTRNMKSPPKVGVWVPAGKIRVT*NWSLPT
Trigger: GGTTGGCAATGACCAGTTCAAGGTGACTCTTATTTT...CCCTGCTGGTACCCAGACCCCCACCTTCGGAGGGGACTTCATGTTCCGTGTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp TCACCCACACATATTGCATATTCTGTGGCAGTGTGCCCAGGCATAAGGCATTGGTGGAGGCCAGTTAGCTaGAACCTCCAGTGCGACCAT +
Preference number: 5 (lower is better)
Translates to: SPTHIAYSVAVCPGIRHWWRPVS*NLQCDH
Trigger: ATGGTCGCACTGGAGGTTCAAGCTAACTGGCCTCCA...CCAATGCCTTATGCCTGGGCACACTGCCACAGAATATGCAATATGTGTGGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACATGCCTGCCAGCTTTCTaGGCCACTCTGCCCAATTCC +
Preference number: 5 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTCLPAF*ATLPNS
Trigger: GGAATTGGGCAGAGTGGCCAAGAAAGCTGGCAGGCA...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp CGAGGGGCGGTGTGGGCACTGGGAGAAAGTGTCCCTACTCCCACTCTCTTTATTTGCTATTACTGTGGATaGTACTCTATGAAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: RGAVWALGESVPTPTLFICYYCG*YSMKSG
Trigger: CCCGGACTTCATAGAGTACAATCCACAGTAATAGCA...AATAAAGAGAGTGGGAGTAGGGACACTTTCTCCCAGTGCCCACACCGCCCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp CCTCAAGCATCACCTTCGTCAGCTGCGTTCCATCTGGGCTTCTGGGTTGCAGGTACCTTGAACTGGTCATaGCCAACCTCAAAAACAAGC +
Preference number: 5 (lower is better)
Translates to: PQASPSSAAFHLGFWVAGTLNWS*PTSKTS
Trigger: GCTTGTTTTTGAGGTTGGCAATGACCAGTTCAAGGT...ACCTGCAACCCAGAAGCCCAGATGGAACGCAGCTGACGAAGGTGATGCTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp TTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACAAACATGCAGAACACCTaGCCGCCATCCGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: FLHNCKAMQNNTKGGWETNMQNT*PPSVLG
Trigger: ACCCAGCACGGATGGCGGCAAGGTGTTCTGCATGTT...TGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp TTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGCAACACGAAGGGAGGTaGGGAGACACAGCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: FHFLHNCKAMQNNTKGGWQHEGR*GDTAGD
Trigger: ATCCCCAGCTGTGTCTCCCAACCTCCCTTCGTGTTG...CCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp GGACTGCTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGCCACCCCTTTGCCTTTaGCTCTCTGGTCACTTCACC +
Preference number: 5 (lower is better)
Translates to: GLLGFHFLHNCKAMQNNTPPLCL*LSGHFT
Trigger: GGTGAAGTGACCAGAGAGCAAAAGGCAAAGGGGTGG...CGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp GACCCCACCAAGTTTCACATTTCTCGGAATTTGCAGGGCTCCGATGGGGGCCCCACCATGGGACACGTTTaGAAAAGAATTGTCGTTACA +
Preference number: 5 (lower is better)
Translates to: DPTKFHISRNLQGSDGGPTMGHV*KRIVVT
Trigger: TGTAACGACAATTCTTTTCAAAACGTGTCCCATGGT...GGGGCCCCCATCGGAGCCCTGCAAATTCCGAGAAATGTGAAACTTGGTGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp TTTCTCCATAACTGCAAAGCCATGCAAAACAACACGAAGGGAGGTTGGGAGACACTGAGTAGGGGTGACTaGGACATAGACACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: FLHNCKAMQNNTKGGWETLSRGD*DIDTLA
Trigger: AGCCAGGGTGTCTATGTCCAAGTCACCCCTACTCAG...TGTCTCCCAACCTCCCTTCGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS-3UTR CAA 90 bp TTTCTTAGTCTGTTCCAAGGGGACTTAAGAAAATCTGGATCTTCTGGGAAATCCATGCCAGGGCTGGCCTaGGTCGGCAGTGTTAAGGAG +
Preference number: 5 (lower is better)
Translates to: FLSLFQGDLRKSGSSGKSMPGLA*VGSVKE
Trigger: CTCCTTAACACTGCCGACCAAGGCCAGCCCTGGCAT...GGATTTCCCAGAAGATCCAGATTTTCTTAAGTCCCCTTGGAACAGACTAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp AAGAAAATCTGGATCTTCTGGGAAATCCCAAAAGGGAAGCCAGTGTCGCCCACAATCCCTCTTTCTCTCTaGGCCCCCGGAAACTTCTAT +
Preference number: 5 (lower is better)
Translates to: KKIWIFWEIPKGKPVSPTIPLSL*APGNFY
Trigger: ATAGAAGTTTCCGGGGGCCAAGAGAGAAAGAGGGAT...TGTGGGCGACACTGGCTTCCCTTTTGGGATTTCCCAGAAGATCCAGATTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp GGTGACTTGGACATAGACACCCTGGCTTTTGGAACCAAGGGAAGGTGGGAGACCCATGAGTCGGTGATATaGACAGCATTTTCCCAAATT +
Preference number: 5 (lower is better)
Translates to: GDLDIDTLAFGTKGRWETHESVI*TAFSQI
Trigger: AATTTGGGAAAATGCTGTCAATATCACCGACTCATG...GGTCTCCCACCTTCCCTTGGTTCCAAAAGCCAGGGTGTCTATGTCCAAGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp GGACTGCTGGGTTTCCACTTTCTCCATAACTGCAAAGCCATGCAAAACAACACGGAAGGAAAGAACACTTaGGCTAGCAACAAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GLLGFHFLHNCKAMQNNTEGKNT*ASNKQA
Trigger: AGCCTGCTTGTTGCTAGCCAAAGTGTTCTTTCCTTC...CGTGTTGTTTTGCATGGCTTTGCAGTTATGGAGAAAGTGGAAACCCAGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp TCTGCAGGTATTAAACCATTAGCAGGTAGAGACATCAATTTAGTGGATCGTGACAAGCAGGCTGGGCTCTaGTCTCCCTTTGCCATTTTT +
Preference number: 5 (lower is better)
Translates to: SAGIKPLAGRDINLVDRDKQAGL*SPFAIF
Trigger: AAAAATGGCAAAGGGAGACAAGAGCCCAGCCTGCTT...GTCACGATCCACTAAATTGATGTCTCTACCTGCTAATGGTTTAATACCTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp TCTGCAGGTATTAAACCATTAGCAGGTAGAGACATCAATTTAGTGGATCGTGACCTTATCACTAGCTACTaGGGACACAGGCACCAACAA +
Preference number: 5 (lower is better)
Translates to: SAGIKPLAGRDINLVDRDLITSY*GHRHQQ
Trigger: TTGTTGGTGCCTGTGTCCCAAGTAGCTAGTGATAAG...GTCACGATCCACTAAATTGATGTCTCTACCTGCTAATGGTTTAATACCTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS-3UTR CAA 90 bp TTTGCTGCAAGACTTTTCATAACCTTTATTAAGCTAAGATGCCTTGCGAAGCTCTACACTGCAGGAGCTTaGCTTTTAAGAGCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: FAARLFITFIKLRCLAKLYTAGA*LLRAGQ
Trigger: TTGGCCTGCTCTTAAAAGCAAAGCTCCTGCAGTGTA...GAGCTTCGCAAGGCATCTTAGCTTAATAAAGGTTATGAAAAGTCTTGCAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS TCA 72 bp GTTGCGGAAGCCGCCGCCGCCCGCTGCCGCCGTGGATaGGGCGGTGTCCGTAGTGTGCGCGCTGCCACCCCC +
Preference number: 6 (lower is better)
Translates to: VAEAAAARCRRG*GGVRSVRAATP
Trigger: GGGGGTGGCAGCGCGCACACTACGGACACCGCCTCATCCACGGCGGCAGCGGGCGGCGGCGGCTTCCGCAAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS GCA 72 bp CCGCCCGCCTGCCCGTTGCGCGTGAGCAGCGCGCGGTaGTCGGCGTCGCGCTTCTCGTCCTCGGCGTTCATG +
Preference number: 6 (lower is better)
Translates to: PPACPLRVSSAR*SASRFSSSAFM
Trigger: CATGAACGCCGAGGACGAGAAGCGCGACGCCGAGCACCGCGCGCTGCTCACGCGCAACGGGCAGGCGGGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS GCA 72 bp AAGGTGCACACGATGAGCGCCAGCGTGCGCACGTTCTaGCGCTTCATCGTCCCGCCCGGGCCGCCGCCGGCC +
Preference number: 6 (lower is better)
Translates to: KVHTMSASVRTF*RFIVPPGPPPA
Trigger: GGCCGGCGGCGGCCCGGGCGGGACGATGAAGCGGCAGAACGTGCGCACGCTGGCGCTCATCGTGTGCACCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302909.4
CDS CCA 72 bp GTGCAGACCCGTGGACACCGAGCTGATGGCGGAGCGTaGCGCCCCGCTGCACAGGCAGCGTCGCGAGGGCGT +
Preference number: 6 (lower is better)
Translates to: VQTRGHRADGGA*RPAAQAASRGR
Trigger: ACGCCCTCGCGACGCTGCCTGTGCAGCGGGGCGCCACGCTCCGCCATCAGCTCGGTGTCCACGGGTCTGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS TCA 72 bp CGGCGAAGCGCCACTGCACGCCGGCCTTGTGCGGCTTaGGGCGCAGCACGACGCGCTCCAGCTCCTCGTAGC +
Preference number: 6 (lower is better)
Translates to: RRSATARRPCAA*GAARRAPAPRS
Trigger: GCTACGAGGAGCTGGAGCGCGTCGTGCTGCGCCTCAAGCCGCACAAGGCCGGCGTGCAGTGGCGCTTCGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS TCA 72 bp AGGTGGACAGGCTGTGCAGACCCGTGGACACCGAGCTaGTGGCGGAGCGTGGCGCCCCGCTGCACAGGCAGC +
Preference number: 6 (lower is better)
Translates to: RWTGCADPWTPS*WRSVAPRCTGS
Trigger: GCTGCCTGTGCAGCGGGGCGCCACGCTCCGCCATCAGCTCGGTGTCCACGGGTCTGCACAGCCTGTCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS TCA 72 bp CCCCTCGGGGCAGTCACACGGAGCTCCTGCGCTTCATaGGGCCGCGGAAGGTGGACAGGCTGTGCAGACCCG +
Preference number: 6 (lower is better)
Translates to: PLGAVTRSSCAS*GRGRWTGCADP
Trigger: CGGGTCTGCACAGCCTGTCCACCTTCCGCGGCCTCATGAAGCGCAGGAGCTCCGTGTGACTGCCCCGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS GCA 72 bp AAGGTGCACACGATGAGCGCCAGCGTGCGCACGTTCTaGCGCTTCATCGTCCCGCTCTCCGCGCCGGGCACC +
Preference number: 6 (lower is better)
Translates to: KVHTMSASVRTF*RFIVPLSAPGT
Trigger: GGTGCCCGGCGCGGAGAGCGGGACGATGAAGCGGCAGAACGTGCGCACGCTGGCGCTCATCGTGTGCACCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620977.1
CDS CAA 72 bp ATGGACACGTCGGCGCGCCGCATGCCCAGCCCCTTCTaGGCGCGGTGCAGCAGGTACCTCACCAAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: MDTSARRMPSPF*ARCSRYLTKVL
Trigger: CAACACCTTGGTGAGGTACCTGCTGCACCGCGCCAAGAAGGGGCTGGGCATGCGGCGCGCCGACGTGTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS CAA 90 bp ATGTTGGCCATGGACACGTCGGCGCGCCGCATGCCCAGCCCCTTCTaGGCGCGGTGCAGCAGGTACCTCACCAAGGTGTTGATGCGCTCG +
Preference number: 6 (lower is better)
Translates to: MLAMDTSARRMPSPF*ARCSRYLTKVLMRS
Trigger: CGAGCGCATCAACACCTTGGTGAGGTACCTGCTGCACCGCGCCAAGAAGGGGCTGGGCATGCGGCGCGCCGACGTGTCCATGGCCAACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS TCA 72 bp CCACGCACGTGTCGGACGTGGAGAGGTCCCGCGGGATaGTCATGGGGATGGAGTACTGCAGCTTCTCGCGGC +
Preference number: 6 (lower is better)
Translates to: PRTCRTWRGPAG*SWGWSTAASRG
Trigger: GCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCGGGACCTCTCCACGTCCGACACGTGCGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS GCA 72 bp GAGAGGTCCCGCGGGATGATCATGGGGATGGAGTACTaGAGCTTCTCGCGGCTCTTGTACCACAGGCACGAG +
Preference number: 6 (lower is better)
Translates to: ERSRGMIMGMEY*SFSRLLYHRHE
Trigger: CTCGTGCCTGTGGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCGGGACCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS CCA 72 bp GCTTCTCGCGGCTCTTGTACCACAGGCACGAGCACATaGACTGGAAGTGCAGCACCTCCGCGTAGACGTTGC +
Preference number: 6 (lower is better)
Translates to: ASRGSCTTGTST*TGSAAPPRRRC
Trigger: GCAACGTCTACGCGGAGGTGCTGCACTTCCAGTCCATGTGCTCGTGCCTGTGGTACAAGAGCCGCGAGAAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS CAA 90 bp CGCGGGATGATCATGGGGATGGAGTACTGCAGCTTCTCGCGGCTCTaGTACCACAGGCACGAGCACATGGACTGGAAGTGCAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: RGMIMGMEYCSFSRL*YHRHEHMDWKCSTS
Trigger: GGAGGTGCTGCACTTCCAGTCCATGTGCTCGTGCCTGTGGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGATCATCCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1
CDS CAA 72 bp ATCATGGGGATGGAGTACTGCAGCTTCTCGCGGCTCTaGTACCACAGGCACGAGCACATGGACTGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: IMGMEYCSFSRL*YHRHEHMDWKC
Trigger: GCACTTCCAGTCCATGTGCTCGTGCCTGTGGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302909.4
ENST00000620977.1