RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000082482

Ensembl transcript IDs: ENST00000391894.6, ENST00000391895.6, ENST00000444842.7, ENST00000457122.1, ENST00000467031.5, ENST00000470177.5, ENST00000474771.5, ENST00000478774.5, ENST00000486921.5

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTaGCGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTC +
Preference number: 1 (lower is better)
Translates to: PPTRSQLLIVVSSQF*RELPLDGGGPLELV
Trigger: GACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR TCA 90 bp GCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCGCTTaGTGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACACTCA +
Preference number: 1 (lower is better)
Translates to: APDCGFQPVLPRASA*WRWPAGTCHKSPHS
Trigger: TGAGTGTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR GCA 90 bp GTCACAACTCCAAAAGTATACCCACAGAAGGCTAGGACTGTGCCCTaGACTCACCACTGTGCCACCTCCTCTCATCTGGCAAAAGTCACC +
Preference number: 1 (lower is better)
Translates to: VTTPKVYPQKARTVP*THHCATSSHLAKVT
Trigger: GGTGACTTTTGCCAGATGAGAGGAGGTGGCACAGTGGTGAGTGCAGGGCACAGTCCTAGCCTTCTGTGGGTATACTTTTGGAGTTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR TCA 90 bp CCTCACCTATGGCTATGCCTAAGGTTATTTAAAGAGAGGGCTATTTaGTGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCG +
Preference number: 1 (lower is better)
Translates to: PHLWLCLRLFKERAI*CSQSQQSLHQHSVA
Trigger: CGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTTAAATAACCTTAGGCATAGCCATAGGTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467031.5
3UTR TCA 90 bp GTGAGCCTATGGCTATGCCTAAGGTTATTTAAAGAGAGGGCTATTTaGTGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCG +
Preference number: 1 (lower is better)
Translates to: VSLWLCLRLFKERAI*CSQSQQSLHQHSVA
Trigger: CGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTTAAATAACCTTAGGCATAGCCATAGGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
3UTR GCA 90 bp CCTCATTTCTCTGCAGTGCCTTTAACGCTAGGCAACGCTGAGTGTTaGTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCA +
Preference number: 1 (lower is better)
Translates to: PHFSAVPLTLGNAEC*FNVHLIWHLFHLRA
Trigger: TGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGAGAAATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR TCA 90 bp CTCTGCACCTCATTTCTCTGCAGTGCCTTTAACGCTAGGCAACGCTaGGTGTTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCT +
Preference number: 1 (lower is better)
Translates to: LCTSFLCSAFNARQR*VLLQCPSNLASISS
Trigger: AGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGAGAAATGAGGTGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR GCA 90 bp CTAATGTCAGAGATGAATTATGCCTGCAATCTGCATTTTTCCATGTaGAAAGTCACAGTGATCCCAACTTCAACTTCTGCCCTCACAGCC +
Preference number: 1 (lower is better)
Translates to: LMSEMNYACNLHFSM*KVTVIPTSTSALTA
Trigger: GGCTGTGAGGGCAGAAGTTGAAGTTGGGATCACTGTGACTTTGCACATGGAAAAATGCAGATTGCAGGCATAATTCATCTCTGACATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR CCA 90 bp CAATTTTACCAGCCTGGTCATAATTACACTGTATATATGTACCACTaGTACCTGAGTCAAATAAATACTCAGAGGGGCCACCTCTGCACC +
Preference number: 1 (lower is better)
Translates to: QFYQPGHNYTVYMYH*YLSQINTQRGHLCT
Trigger: GGTGCAGAGGTGGCCCCTCTGAGTATTTATTTGACTCAGGTACCAGTGGTACATATATACAGTGTAATTATGACCAGGCTGGTAAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR CCA 90 bp AAAAAGGCATCAGACATTGCTTGTCATTCCACTCATCAAAGAAAGTaGACCGTTCAACAAGCATCATCAGAAAGAAAGTGCTGGCTCAGA +
Preference number: 1 (lower is better)
Translates to: KKASDIACHSTHQRK*TVQQASSERKCWLR
Trigger: TCTGAGCCAGCACTTTCTTTCTGATGATGCTTGTTGAACGGTCCACTTTCTTTGATGAGTGGAATGACAAGCAATGTCTGATGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR CCA 90 bp TTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTaGCATCTATTTCATCTTCGGGCATCATCACTTCAGTCATTTTAC +
Preference number: 1 (lower is better)
Translates to: LTLGNAECCFNVHLI*HLFHLRASSLQSFY
Trigger: GTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR-3UTR TCA 90 bp CTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTCCGAGAGCTTCCGCTTaGTGGAGGTGGCCCGCTGGA +
Preference number: 2 (lower is better)
Translates to: LLVSLNSAVTLAVHSAACPRASA*WRWPAG
Trigger: TCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGG...ACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR GCA 90 bp CGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACCCACTCAGCAGCGTGTaGTCTGAACTCTCCCACCTC +
Preference number: 2 (lower is better)
Translates to: RELPLDGGGPLELVINLHPLSSV*SELSHL
Trigger: GAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGG...GTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR CAA 90 bp TCCACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTaGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCCACCTCT +
Preference number: 2 (lower is better)
Translates to: STLSRLLVSLNSAVT*AVHSAACALNSPTS
Trigger: AGAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR TCA 90 bp TTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCACCGAGAGCTTCCGCTTaGTGGAGGTGGCCCGCTGGA +
Preference number: 2 (lower is better)
Translates to: LMFSITAISSPAQCGVKPPRASA*WRWPAG
Trigger: TCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGG...TGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR GCA 90 bp TCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATCCACTCAGCAGCGTGTaGTCTGAACTCTCCCACCTC +
Preference number: 2 (lower is better)
Translates to: SQSQQSLHQHSVASNHSDPLSSV*SELSHL
Trigger: GAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGG...ATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR GCA 90 bp CAGCACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGCCACTCAGCAGCGTGTaGTCTGAACTCTCCCACCTC +
Preference number: 2 (lower is better)
Translates to: QHSVASNHSDRYSQSSVRPLSSV*SELSHL
Trigger: GAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGG...CCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR TCA 90 bp AGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGTCAGGTGGTTCACTaGCAGGGTCCTCCTACAAGG +
Preference number: 2 (lower is better)
Translates to: REGYLMFSITAISSPAQCGQVVH*QGPPTR
Trigger: CCTTGTAGGAGGACCCTGTCAGTGAACCACCTGACC...ACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR TCA 90 bp TCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATCAAGGAGTCAGCTCCTaGTTGTGGTTTCCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: SQSQQSLHQHSVASNHSDQGVSS*LWFPAS
Trigger: ACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTG...ATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR CCA 90 bp CACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGGAGAGACATCCCTCTCGCTaGTCAGGTGGTTCACTGACA +
Preference number: 2 (lower is better)
Translates to: HSVASNHSDRYSQSSVRERHPSR*SGGSLT
Trigger: TGTCAGTGAACCACCTGACCAGCGAGAGGGATGTCT...CTCCCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR GCA 90 bp CTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCCTCACCTATGGCTATaGCTAAGGTTATTTAAAGAG +
Preference number: 2 (lower is better)
Translates to: LVSLNSAVTLAVHSAACAPHLWL*LRLFKE
Trigger: CTCTTTAAATAACCTTAGGCATAGCCATAGGTGAGG...AGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467031.5
3UTR-3UTR CCA 90 bp CTGACAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTAGAAGTCCTCACCTATaGCTATGCCTAAGGTTATTT +
Preference number: 2 (lower is better)
Translates to: LTGSSYKESAPDCGFQPVRSPHL*LCLRLF
Trigger: AAATAACCTTAGGCATAGCCATAGGTGAGGACTTCT...AACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467031.5
3UTR-3UTR TCA 90 bp TTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTATGCGAATCTTGGTCTaGCTAACATTCCACTTAATA +
Preference number: 2 (lower is better)
Translates to: LNSAVTLAVHSAACALNSMRILV*LTFHLI
Trigger: TATTAAGTGGAATGTTAGTCAGACCAAGATTCGCAT...AGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
3UTR-3UTR TCA 90 bp TCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATAACGCTAGGCAACGCTaGGTGTTGCTTCAATGTCCA +
Preference number: 2 (lower is better)
Translates to: SGIITSVILHTVSSKVWYNARQR*VLLQCP
Trigger: TGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTT...ATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR-3UTR GCA 90 bp CACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGGAGAATATCGGATCCACCTaGAACGTAGTCACCAAATCC +
Preference number: 2 (lower is better)
Translates to: HSVASNHSDRYSQSSVRENIGST*NVVTKS
Trigger: GGATTTGGTGACTACGTTGCAGGTGGATCCGATATT...CTCCCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
3UTR-3UTR GCA 90 bp TCTGCAGTGCCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAAAAGGCATCAGACATTaGTTGTCATTCCACTCATCA +
Preference number: 2 (lower is better)
Translates to: SAVPLTLGNAECCFNVHLKGIRH*LSFHSS
Trigger: TGATGAGTGGAATGACAAGCAATGTCTGATGCCTTT...TAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CCA 90 bp GGTTATTTAAAGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGACATCCCTCTCGCTaGTCAGGTGGTTCACTGACA +
Preference number: 2 (lower is better)
Translates to: GYLKRGLFDVLNHSNLFTRHPSR*SGGSLT
Trigger: TGTCAGTGAACCACCTGACCAGCGAGAGGGATGTCT...GGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTTAAATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
3UTR-3UTR GCA 90 bp TCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGGGCAACGCTGAGTGTTaGTTCAATGTCCATCTAATT +
Preference number: 2 (lower is better)
Translates to: SSGIITSVILHTVSSKVWGNAEC*FNVHLI
Trigger: AATTAGATGGACATTGAAGCAACACTCAGCGTTGCC...CCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR-3UTR TCA 90 bp CCTTCTATGTGTTTGAATATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAATGCGAATCTTGGTCTaGCTAACATTCCACTTAATA +
Preference number: 2 (lower is better)
Translates to: PSMCLNMIAGRATKSTQPMRILV*LTFHLI
Trigger: TATTAAGTGGAATGTTAGTCAGACCAAGATTCGCAT...TGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCATATTCAAACACATAGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
3UTR-3UTR GCA 90 bp CCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTGGCATCCTCACCTATGGCTATaGCTAAGGTTATTTAAAGAG +
Preference number: 2 (lower is better)
Translates to: PLTLGNAECCFNVHLIWHPHLWL*LRLFKE
Trigger: CTCTTTAAATAACCTTAGGCATAGCCATAGGTGAGG...ATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CCA 90 bp TCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGGTTGTCATCCATAAATaGTCCATATCTAGGCTCAGT +
Preference number: 2 (lower is better)
Translates to: SSGIITSVILHTVSSKVWVVIHK*SISRLS
Trigger: ACTGAGCCTAGATATGGACCATTTATGGATGACAAC...CCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CCA 90 bp CAGCCTGGTCATAATTACACTGTATATATGTACCACTGGTACCTGAGTCAAATAGAGAGGAAAACAGTCTaGGCACAAAAAGGCATCAGA +
Preference number: 2 (lower is better)
Translates to: QPGHNYTVYMYHWYLSQIERKTV*AQKGIR
Trigger: TCTGATGCCTTTTTGTGCCCAGACTGTTTTCCTCTC...TATTTGACTCAGGTACCAGTGGTACATATATACAGTGTAATTATGACCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CCA 90 bp CAGCCTGGTCATAATTACACTGTATATATGTACCACTGGTACCTGAGTCAAATACATTCTGAGGCCTTATaGCACATTAGGGAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: QPGHNYTVYMYHWYLSQIHSEAL*HIRERE
Trigger: CTCTCTTTCCCTAATGTGCCATAAGGCCTCAGAATG...TATTTGACTCAGGTACCAGTGGTACATATATACAGTGTAATTATGACCAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CCA 90 bp AGAGATGAATTATGCCTGCAATCTGCATTTTTCCATGTGCAAAGTCACAGTGATTTCAAATGGGAGAACTaGGGTAAAAGACTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: RDELCLQSAFFHVQSHSDFKWEN*GKRLQR
Trigger: CCTCTGCAGTCTTTTACCCCAGTTCTCCCATTTGAA...ATCACTGTGACTTTGCACATGGAAAAATGCAGATTGCAGGCATAATTCATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CCA 90 bp TTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTGCAGAGGTGAGCCTATaGCTATGCCTAAGGTTATTT +
Preference number: 2 (lower is better)
Translates to: LLQCPSNLASISSSGIITAEVSL*LCLRLF
Trigger: AAATAACCTTAGGCATAGCCATAGGCTCACCTCTGC...AGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
3UTR-3UTR TCA 90 bp TCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATATTTTGTTCCCCCTTTaGGCTCATGCACAATTTAAA +
Preference number: 2 (lower is better)
Translates to: SGIITSVILHTVSSKVWYILFPL*AHAQFK
Trigger: TTTAAATTGTGCATGAGCTCAAAGGGGGAACAAAAT...ATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CCA 90 bp GCATCTATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGAAGTCCTCACCTATaGCTATGCCTAAGGTTATTT +
Preference number: 2 (lower is better)
Translates to: ASISSSGIITSVILHTVSRSPHL*LCLRLF
Trigger: AAATAACCTTAGGCATAGCCATAGGTGAGGACTTCT...GGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CCA 90 bp GCATCTATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCGGTATGGTATTCAAATaGGAGAACTGGGGTAAAAGA +
Preference number: 2 (lower is better)
Translates to: ASISSSGIITSVILHTVSGMVFK*ENWGKR
Trigger: TCTTTTACCCCAGTTCTCCCATTTGAATACCATACC...GGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR-3UTR TCA 90 bp TATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAAAAGAGAGGGCTATTTaGTGTTCTCAATCACAGCAA +
Preference number: 2 (lower is better)
Translates to: YFIFGHHHFSHFTHCFQQKERAI*CSQSQQ
Trigger: TTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTT...TTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486921.5
3UTR-3UTR GCA 90 bp GCATCTATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCTCATCAGAAAGAAAGTaGTGGCTCAGAATTCCAAAT +
Preference number: 2 (lower is better)
Translates to: ASISSSGIITSVILHTVSSSERK*WLRIPN
Trigger: ATTTGGAATTCTGAGCCAGCACTTTCTTTCTGATGA...GGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATAGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CCA 90 bp ATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGAATGTCCATCTAATTTaGCATCTATTTCATCTTCGG +
Preference number: 2 (lower is better)
Translates to: ISSSGIITSVILHTVSSKNVHLI*HLFHLR
Trigger: CCGAAGATGAAATAGATGCCAAATTAGATGGACATT...CTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR GCA 72 bp AGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTaGCGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTG +
Preference number: 3 (lower is better)
Translates to: RSQLLIVVSSQF*RELPLDGGGPL
Trigger: CAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR CAA 90 bp GATAGATACTCTCAGTCTTCAGTAAGGGAGGCAAGACATCCCTCTCGCTGGTCAGCCGAGAGCTTCCGCTaGATGGAGGTGGCCCGCTGG +
Preference number: 3 (lower is better)
Translates to: DRYSQSSVREARHPSRWSAESFR*MEVARW
Trigger: CCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGC...TGACCAGCGAGAGGGATGTCTTGCCTCCCTTACTGAAGACTGAGAGTATCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR CAA 90 bp TCCACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCAATTCGGCTGTGACGTaGGCTGTCCACTCAGCAGCG +
Preference number: 3 (lower is better)
Translates to: STLSRLLVSLNSAVTLAVNSAVT*AVHSAA
Trigger: CGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATT...GACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR TCA 72 bp AGGCAAGACATCCCTCTCGCTGGTCAGGTGGTTCACTaGCAGGGTCCTCCTACAAGGAGTCAGCTCCTGATT +
Preference number: 3 (lower is better)
Translates to: RQDIPLAGQVVH*QGPPTRSQLLI
Trigger: AATCAGGAGCTGACTCCTTGTAGGAGGACCCTGTCAGTGAACCACCTGACCAGCGAGAGGGATGTCTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR TCA 72 bp TGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCGCTTaGTGGAGGTGGCCCGCTGGAACTTGTCATAAATCT +
Preference number: 3 (lower is better)
Translates to: CGFQPVLPRASA*WRWPAGTCHKS
Trigger: AGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR TCA 72 bp TTCACTGACAGGGTCCTCCTACAAGGAGTCAGCTCCTaGTTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTC +
Preference number: 3 (lower is better)
Translates to: FTDRVLLQGVSS*LWFPASSAESF
Trigger: GAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGTCAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR GCA 72 bp TTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTaGTCTGAACTCTCCCACCTCTTCTTTTGTCTTTTT +
Preference number: 3 (lower is better)
Translates to: FGCDVGCPLSSV*SELSHLFFCLF
Trigger: AAAAAGACAAAAGAAGAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR CAA 90 bp GGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCGCCTCCTGGTTTCTTaGAATTCGGCTGTGACGTTG +
Preference number: 3 (lower is better)
Translates to: GLFDVLNHSNLFTSTVWRRLLVS*NSAVTL
Trigger: CAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCG...ACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR CAA 90 bp TCTGCAGTGCCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTACAGCCTTCTATGTGTTaGAATATGATCGCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: SAVPLTLGNAECCFNVHLQPSMC*NMIAGR
Trigger: TCTGCCTGCGATCATATTCAAACACATAGAAGGCTG...TAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
3UTR TCA 72 bp CCTGCAATCTGCATTTTTCCATGTGCAAAGTCACAGTaGTCCCAACTTCAACTTCTGCCCTCACAGCCAAGT +
Preference number: 3 (lower is better)
Translates to: PAICIFPCAKSQ*SQLQLLPSQPS
Trigger: ACTTGGCTGTGAGGGCAGAAGTTGAAGTTGGGATCACTGTGACTTTGCACATGGAAAAATGCAGATTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CAA 90 bp AATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCAGGCAGAACGTATCTTCCACTTaGGCAATTCCTTTTCCAAAT +
Preference number: 3 (lower is better)
Translates to: NGVQGTPAFYVFEYDRRQNVSST*AIPFPN
Trigger: ATTTGGAAAAGGAATTGCCAAAGTGGAAGATACGTT...CTGCCTGCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
3UTR-3UTR CAA 90 bp CCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTGGCATGGCATCAGACATTGCTaGTCATTCCACTCATCAAAG +
Preference number: 3 (lower is better)
Translates to: PLTLGNAECCFNVHLIWHGIRHC*SFHSSK
Trigger: CTTTGATGAGTGGAATGACAAGCAATGTCTGATGCC...ATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR GCA 72 bp GTATGGTATTCAAATGGGAGAACTGGGGTAAAAGACTaGAGAGGTGAGCCTATGGCTATGCCTAAGGTTATT +
Preference number: 3 (lower is better)
Translates to: VWYSNGRTGVKD*RGEPMAMPKVI
Trigger: AATAACCTTAGGCATAGCCATAGGCTCACCTCTGCAGTCTTTTACCCCAGTTCTCCCATTTGAATACCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486921.5
3UTR CCA 72 bp GGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTaGCATCTATTTCATCTTCGGGCATCATCACTTCAG +
Preference number: 3 (lower is better)
Translates to: GNAECCFNVHLI*HLFHLRASSLQ
Trigger: CTGAAGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR CCA 72 bp GTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTaGCGTCAAACCATTCAGATAGATACTCTCAGTCTT +
Preference number: 3 (lower is better)
Translates to: VLNHSNLFTSTV*RQTIQIDTLSL
Trigger: AAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR-3UTR CAA 90 bp GCTTATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAACAGCCTTCTATGTGTTaGAATATGATCGCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: AYRSPDIQYRIHLQRSHQQPSMC*NMIAGR
Trigger: TCTGCCTGCGATCATATTCAAACACATAGAAGGCTG...TTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTATAAGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
3UTR GCA 72 bp TCTGCAGTGCCTTTAACGCTAGGCAACGCTGAGTGTTaGTTCAATGTCCATCTAATTTGGCATCTATTTCAT +
Preference number: 3 (lower is better)
Translates to: SAVPLTLGNAEC*FNVHLIWHLFH
Trigger: ATGAAATAGATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR CCA 72 bp CAGCCTGGTCATAATTACACTGTATATATGTACCACTaGTACCTGAGTCAAATAAATACTCAGAGGGGCCAC +
Preference number: 3 (lower is better)
Translates to: QPGHNYTVYMYH*YLSQINTQRGH
Trigger: GTGGCCCCTCTGAGTATTTATTTGACTCAGGTACCAGTGGTACATATATACAGTGTAATTATGACCAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
3UTR TCA 72 bp TGGCTATGCCTAAGGTTATTTAAAGAGAGGGCTATTTaGTGTTCTCAATCACAGCAATCTCTTCACCAGCAC +
Preference number: 3 (lower is better)
Translates to: WLCLRLFKERAI*CSQSQQSLHQH
Trigger: GTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTTAAATAACCTTAGGCATAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
3UTR-3UTR CAA 90 bp GGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAAAAGGCATCAGACATaGCTTGTCATTCCACTCATC +
Preference number: 3 (lower is better)
Translates to: GIITSVILHTVSSKVWYSKRHQT*LVIPLI
Trigger: GATGAGTGGAATGACAAGCAATGTCTGATGCCTTTT...TGAATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CAA 90 bp TCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGAACGTATCTTCCACTTaGGCAATTCCTTTTCCAAAT +
Preference number: 3 (lower is better)
Translates to: SSGIITSVILHTVSSKVWNVSST*AIPFPN
Trigger: ATTTGGAAAAGGAATTGCCAAAGTGGAAGATACGTT...CCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486921.5
3UTR TCA 72 bp TTAAAGATTCTGGGTTTATTTTTCAAGACCCTAATCTaGATGCCACTTATTCAGATACAGCTCCCACCCCCA +
Preference number: 3 (lower is better)
Translates to: LKILGLFFKTLI*MPLIQIQLPPP
Trigger: TGGGGGTGGGAGCTGTATCTGAATAAGTGGCATTCAGATTAGGGTCTTGAAAAATAAACCCAGAATCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR-3UTR CAA 90 bp TTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTCAATGTCCATCTAATTaGGCATCTATTTCATCTTCG +
Preference number: 3 (lower is better)
Translates to: LLQCPSNLASISSSGIITQCPSN*ASISSS
Trigger: CGAAGATGAAATAGATGCCAAATTAGATGGACATTG...AGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp TGCCGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCCGAGAGCTTCCGCTTaGTGGAGGTGGCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: CRELPLDGGGPLELVINLPRASA*WRWPAG
Trigger: TCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGG...GAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp GCCAGTTCTGCCGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCAGGTCAGGTGGTTCACTaGCAGGGTCCTCCTACAAGG +
Preference number: 4 (lower is better)
Translates to: ASSAESFRLMEVARWNLSGQVVH*QGPPTR
Trigger: CCTTGTAGGAGGACCCTGTCAGTGAACCACCTGACC...TGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGACCGAGAGCTTCCGCTTaGTGGAGGTGGCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SSYKESAPDCGFQPVLPRPRASA*WRWPAG
Trigger: TCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGG...TCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp CTGACAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCGCGCTCCGAGCTaGACGGGCAGGCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: LTGSSYKESAPDCGFQPVLRAPS*TGRHFP
Trigger: GGGAAAATGCCTGCCCGTGCAGCTCGGAGCGCGCAG...AACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474771.5
CDS-3UTR CCA 90 bp CAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCTTTAGGCGGAGGCCAAGTTaGGCTTGGGCGCCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QINTQRGHLCTSFLCSAFRRRPS*AWAPPP
Trigger: GGGCGGCGGCGCCCAAGCCCAACTTGGCCTCCGCCT...AAAGGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp GCCAGTTCTGCCGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCACCAGCTCCGTCGAATTaGCACAGGAATGTTGGGATA +
Preference number: 4 (lower is better)
Translates to: ASSAESFRLMEVARWNLSPAPSN*HRNVGI
Trigger: TATCCCAACATTCCTGTGTCAATTCGACGGAGCTGG...TGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp GCCAGTTCTGCCGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCAGCTGCCACTATTTGCTaGATGAGTTCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASSAESFRLMEVARWNLSAATIC*MSSSSS
Trigger: GGAGCTGGATGAACTCATTCAGCAAATAGTGGCAGC...TGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR GCA 90 bp CAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCGCTTGATGGACCACTCAGCAGCGTGTaGTCTGAACTCTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: QLLIVVSSQFCRELPLDGPLSSV*SELSHL
Trigger: GAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGG...TCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp CCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTGGCATGGGCGCCCGCAGCTCTaGAGCCCTCCGCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PLTLGNAECCFNVHLIWHGRPQL*SPPLLS
Trigger: GGAGAGCAGCGGAGGGCTGCAGAGCTGCGGGCGCCC...ATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp TCTGCAGTGCCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTACCGAGAGCTTCCGCTTaGTGGAGGTGGCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SAVPLTLGNAECCFNVHLPRASA*WRWPAG
Trigger: TCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGG...TAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp ACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACGGTCAGGTGGTTCACTaGCAGGGTCCTCCTACAAGG +
Preference number: 4 (lower is better)
Translates to: TLSRLLVSLNSAVTLAVHGQVVH*QGPPTR
Trigger: CCTTGTAGGAGGACCCTGTCAGTGAACCACCTGACC...GTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp AGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCACCACTCAGCAGCGTGTaGTCTGAACTCTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: SRLLVSLNSAVTLAVHSAPLSSV*SELSHL
Trigger: GAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGG...TGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp TCCACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCCACTCAGCAGCGTGTaGTCTGAACTCTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: STLSRLLVSLNSAVTLAVPLSSV*SELSHL
Trigger: GAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGG...GACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp GAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCGTTTCCAGCCAGTTCTaGCGAGAGCTTCCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: EFGCDVGCPLSSVCSELSVSSQF*RELPLD
Trigger: ATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAAC...GGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp TCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATGGGTGCAGCCCCAGCTaGCGTGCGCCCCGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: SGIITSVILHTVSSKVWYGCSPS*RAPRRL
Trigger: AAGACGCCGGGGCGCACGGCAGCTGGGGCTGCACCC...ATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp GAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCGCACTGTGGGTTTCGTaGAAAACGAGAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: EFGCDVGCPLSSVCSELSALWVS*KTRASV
Trigger: AACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGC...GGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TGCCGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCTCGGTTTGGAGTTCTaGGCGGCAGATTTAGGATCC +
Preference number: 4 (lower is better)
Translates to: CRELPLDGGGPLELVINLLGLEF*AADLGS
Trigger: GGATCCTAAATCTGCCGCTCAGAACTCCAAACCGAG...GAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACACTCAGTCGCAAGGAGTCAGCTCCTaGTTGTGGTTTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PLDGGGPLELVINLHTQSQGVSS*LWFPAS
Trigger: ACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTG...CGACTGAGTGTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCGCACTGTGGGTTTCGTaGAAAACGAGAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: QGPPTRSQLLIVVSSQFCALWVS*KTRASV
Trigger: AACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGC...GCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACACTCAGTCGAGACATCCCTCTCGCTaGTCAGGTGGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: PLDGGGPLELVINLHTQSRHPSR*SGGSLT
Trigger: TGTCAGTGAACCACCTGACCAGCGAGAGGGATGTCT...CGACTGAGTGTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
3UTR CAA 72 bp AGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTaGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCT +
Preference number: 4 (lower is better)
Translates to: SRLLVSLNSAVT*AVHSAACALNS
Trigger: AGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp GAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCCTCTGTGAAATCTCATaGGGCTGCTCCAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: EFGCDVGCPLSSVCSELSLCEIS*GCSNAL
Trigger: CAAAGCATTGGAGCAGCCTCATGAGATTTCACAGAG...GGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCGCTTGATGGAGGTAATGGTGGTCCTCTGTaGAATCTCATGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLIVVSSQFCRELPLDGGNGGPL*NLMRLL
Trigger: GAGCAGCCTCATGAGATTTCACAGAGGACCACCATT...ACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACACTCAGTCGCCAGCTCCGTCGAATTaGCACAGGAATGTTGGGATA +
Preference number: 4 (lower is better)
Translates to: PLDGGGPLELVINLHTQSPAPSN*HRNVGI
Trigger: TATCCCAACATTCCTGTGTCAATTCGACGGAGCTGG...CGACTGAGTGTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp GAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCGCCTTCTGTGCGTGGTaGGATGTTTCCAAATCCTAT +
Preference number: 4 (lower is better)
Translates to: EFGCDVGCPLSSVCSELSAFCAW*DVSKSY
Trigger: ATAGGATTTGGAAACATCTCACCACGCACAGAAGGC...GGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR TCA 90 bp TTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCAAGGAGTCAGCTCCTaGTTGTGGTTTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LNSAVTLAVHSAACALNSQGVSS*LWFPAS
Trigger: ACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTG...AGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCGCTTGATGGAAACGCTAGGCAACGCTaGGTGTTGCTTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: QLLIVVSSQFCRELPLDGNARQR*VLLQCP
Trigger: TGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTT...TCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR GCA 90 bp GATCCAGAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCCTGCGCGCTCCGAGCTaGACGGGCAGGCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: DPEPHDRLIEVQIFNIGSLRAPS*TGRHFP
Trigger: GGGAAAATGCCTGCCCGTGCAGCTCGGAGCGCGCAG...GGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470177.5
CDS-3UTR GCA 90 bp GAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCACCTGCTATTCAGAGACGGGCTaGGCGCTCCGAGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: EPHDRLIEVQIFNIGSTCYSETG*ALRAAR
Trigger: CCGTGCAGCTCGGAGCGCGCAGCCCGTCTCTGAATA...GCAGGTGGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470177.5
CDS-3UTR GCA 90 bp TACTCTCAGTCTTCAGTAAGGGAGGCAAGACATCCCTCTCGCTGGTCAGGTGGTATGAGGCTGCTCCAATaGTTTGAACACGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: YSQSSVREARHPSRWSGGMRLLQ*FEHGGS
Trigger: GGAGCCACCGTGTTCAAAGCATTGGAGCAGCCTCAT...ACCACCTGACCAGCGAGAGGGATGTCTTGCCTCCCTTACTGAAGACTGAGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp TGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCCACCTCTTCTTTTGCCGCCTTCTGTaGGTGGTGAGATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: CDVGCPLSSVCSELSHLFFCRLL*VVRCFQ
Trigger: TTGGAAACATCTCACCACGCACAGAAGGCGGCAAAA...GAAGAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp GCCAGTTCTGCCGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCACTTTTCCAAATATGGTaGCTAGCTGATCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: ASSAESFRLMEVARWNLSLFQIW*LADLQL
Trigger: GAGTTGGAGATCAGCTAGGCACCATATTTGGAAAAG...TGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp TTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTGTTTCCAGCCAGTTCTaGCGAGAGCTTCCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LNSAVTLAVHSAACALNSVSSQF*RELPLD
Trigger: ATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAAC...AGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp TACTCTCAGTCTTCAGTAAGGGAGGCAAGACATCCCTCTCGCTGGTCAGGTGGTACGAGAGCCTCGGTTTaGAGTTCTGAGCGGCAGATT +
Preference number: 4 (lower is better)
Translates to: YSQSSVREARHPSRWSGGTRASV*SSERQI
Trigger: AATCTGCCGCTCAGAACTCCAAACCGAGGCTCTCGT...ACCACCTGACCAGCGAGAGGGATGTCTTGCCTCCCTTACTGAAGACTGAGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCGCTTGATGGAGGTGGGAAGCAAGCACTGTaGGTTTCGTGGAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: LLIVVSSQFCRELPLDGGGKQAL*VSWKTR
Trigger: TCTCGTTTTCCACGAAACCCACAGTGCTTGCTTCCC...ACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp TCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAAGACATCCCTCTCGCTaGTCAGGTGGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: SSYKESAPDCGFQPVLPRRHPSR*SGGSLT
Trigger: TGTCAGTGAACCACCTGACCAGCGAGAGGGATGTCT...TCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCAATGGTGGTCCTCTGTaGAATCTCATGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: YKESAPDCGFQPVLPRASNGGPL*NLMRLL
Trigger: GAGCAGCCTCATGAGATTTCACAGAGGACCACCATT...GGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CTGACAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCCACTATTTGCTGAATaGGTTCATCCAGCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: LTGSSYKESAPDCGFQPVPLFAE*VHPAPS
Trigger: CGACGGAGCTGGATGAACTCATTCAGCAAATAGTGG...AACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR TCA 90 bp TCCACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCCACTATTTGCTGAATaGGTTCATCCAGCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: STLSRLLVSLNSAVTLAVPLFAE*VHPAPS
Trigger: CGACGGAGCTGGATGAACTCATTCAGCAAATAGTGG...GACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR TCA 90 bp TACTCTCAGTCTTCAGTAAGGGAGGCAAGACATCCCTCTCGCTGGTCAGGTGGTGCTGCCACTATTTGCTaGATGAGTTCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YSQSSVREARHPSRWSGGAATIC*MSSSSS
Trigger: GGAGCTGGATGAACTCATTCAGCAAATAGTGGCAGC...ACCACCTGACCAGCGAGAGGGATGTCTTGCCTCCCTTACTGAAGACTGAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR TCA 90 bp GAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCCCAAATCCCAGTGACTaGTTTGATTGGAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: EFGCDVGCPLSSVCSELSPNPSD*FDWRCF
Trigger: GAAACACCTCCAATCAAATCAGTCACTGGGATTTGG...GGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR TCA 90 bp CAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCGCCTTCTGTGCGTGGTaGGATGTTTCCAAATCCTAT +
Preference number: 4 (lower is better)
Translates to: QGPPTRSQLLIVVSSQFCAFCAW*DVSKSY
Trigger: ATAGGATTTGGAAACATCTCACCACGCACAGAAGGC...GCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR TCA 90 bp CTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTAATATGGTGCCTAGCTaGTCTCCAACTCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LVSLNSAVTLAVHSAACANMVPS*SPTPAK
Trigger: CTTGGCTGGAGTTGGAGATCAGCTAGGCACCATATT...AGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATCCGAGAGCTTCCGCTTaGTGGAGGTGGCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SGIITSVILHTVSSKVWYPRASA*WRWPAG
Trigger: TCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGG...ATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp TACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCACTGGGGTAAAAGACTaGAGAGGTGAGCCTATGGCT +
Preference number: 4 (lower is better)
Translates to: YKESAPDCGFQPVLPRASTGVKD*RGEPMA
Trigger: AGCCATAGGCTCACCTCTGCAGTCTTTTACCCCAGT...GGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR CCA 90 bp AGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGGGAAGCAAGCACTGTaGGTTTCGTGGAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: SRLLVSLNSAVTLAVHSAGKQAL*VSWKTR
Trigger: TCTCGTTTTCCACGAAACCCACAGTGCTTGCTTCCC...TGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCGCTTGATGGACCACCAGGAATATCGTaGAGACCGTCTTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: QLLIVVSSQFCRELPLDGPPGIS*RPSSIS
Trigger: TGAAATGGAAGACGGTCTCCACGATATTCCTGGTGG...TCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp GTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGCTCTGTGAAATCTCATaGGGCTGCTCCAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: VSLNSAVTLAVHSAACALLCEIS*GCSNAL
Trigger: CAAAGCATTGGAGCAGCCTCATGAGATTTCACAGAG...CAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGATTTCCAAATCCTGAATaGGTTCATCCAGCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: SSYKESAPDCGFQPVLPRFPNPE*VHPAPS
Trigger: CGACGGAGCTGGATGAACTCATTCAGGATTTGGAAA...TCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR GCA 90 bp TTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTGCCCCGGCGTCTTTGTaGGCGAGCCTCGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLQCPSNLASISSSGIITAPASL*ASLVQP
Trigger: GGGCTGAACGAGGCTCGCGCACAAAGACGCCGGGGC...AGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp CAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCTTTCTTTGTTTTACAAGGTaGGGAGAGCGGGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: QINTQRGHLCTSFLCSAFLCFTR*GERGWT
Trigger: CGTCCAGCCCCGCTCTCCCCACCTTGTAAAACAAAG...AAAGGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp GATAGATACTCTCAGTCTTCAGTAAGGGAGGCAAGACATCCCTCTCGCTGGTCAGCACTGTGGGTTTCGTaGAAAACGAGAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: DRYSQSSVREARHPSRWSALWVS*KTRASV
Trigger: AACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGC...TGACCAGCGAGAGGGATGTCTTGCCTCCCTTACTGAAGACTGAGAGTATCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp AATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCAGGCAGGGGAAGCAAGCACTGTaGGTTTCGTGGAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: NGVQGTPAFYVFEYDRRQGKQAL*VSWKTR
Trigger: TCTCGTTTTCCACGAAACCCACAGTGCTTGCTTCCC...CTGCCTGCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CTGACAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCCACCAGGAATATCGTaGAGACCGTCTTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: LTGSSYKESAPDCGFQPVPPGIS*RPSSIS
Trigger: TGAAATGGAAGACGGTCTCCACGATATTCCTGGTGG...AACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp TGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCCACCTCTTCTCTGGATCACAATGGTaGTCCTCTGTGAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: CDVGCPLSSVCSELSHLFSGSQW*SSVKSH
Trigger: ATGAGATTTCACAGAGGACCACCATTGTGATCCAGA...GAAGAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACACTCAGTCGTTCAAATGGGAGAACTaGGGTAAAAGACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLDGGGPLELVINLHTQSFKWEN*GKRLQR
Trigger: CCTCTGCAGTCTTTTACCCCAGTTCTCCCATTTGAA...CGACTGAGTGTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR TCA 90 bp TCTGCAGTGCCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTACTCGGTTTGGAGTTCTaGGCGGCAGATTTAGGATCC +
Preference number: 4 (lower is better)
Translates to: SAVPLTLGNAECCFNVHLLGLEF*AADLGS
Trigger: GGATCCTAAATCTGCCGCTCAGAACTCCAAACCGAG...TAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp AGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCACCAAATCCCAGTGACTaGTTTGATTGGAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SRLLVSLNSAVTLAVHSAPNPSD*FDWRCF
Trigger: GAAACACCTCCAATCAAATCAGTCACTGGGATTTGG...TGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR TCA 90 bp TCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGGGTCAGGTGGTTCACTaGCAGGGTCCTCCTACAAGG +
Preference number: 4 (lower is better)
Translates to: SSGIITSVILHTVSSKVWGQVVH*QGPPTR
Trigger: CCTTGTAGGAGGACCCTGTCAGTGAACCACCTGACC...CCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp TGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCCACCTCTTCAAAGAGAGGGCTATTTaGTGTTCTCAATCACAGCAA +
Preference number: 4 (lower is better)
Translates to: CDVGCPLSSVCSELSHLFKERAI*CSQSQQ
Trigger: TTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTT...GAAGAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCTTTAGGCGCTGGGAAGCATaGGGCATGCAGCATTCAAAA +
Preference number: 4 (lower is better)
Translates to: QINTQRGHLCTSFLCSAFRRWEA*GMQHSK
Trigger: TTTTGAATGCTGCATGCCTCATGCTTCCCAGCGCCT...AAAGGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp TCCACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCGATGTTTCCAAATCCTaGATGAGTTCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: STLSRLLVSLNSAVTLAVDVSKS*MSSSSS
Trigger: GGAGCTGGATGAACTCATTCAGGATTTGGAAACATC...GACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR GCA 90 bp TGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTTCTGCGCGCTCCGAGCTaGACGGGCAGGCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: CFNVHLIWHLFHLRASSLLRAPS*TGRHFP
Trigger: GGGAAAATGCCTGCCCGTGCAGCTCGGAGCGCGCAG...AAGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR GCA 90 bp TCTGCAGTGCCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATGAGGCTGCTCCAATaGTTTGAACACGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAVPLTLGNAECCFNVHLMRLLQ*FEHGGS
Trigger: GGAGCCACCGTGTTCAAAGCATTGGAGCAGCCTCAT...TAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp CAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCTTTGTTTCCAGCCAGTTCTaGCGAGAGCTTCCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: QINTQRGHLCTSFLCSAFVSSQF*RELPLD
Trigger: ATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAAC...AAAGGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp GCTTATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAAAGGTGCCGCCACTCCTaGTCTATAGCCGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: AYRSPDIQYRIHLQRSHQRCRHS*SIAGSL
Trigger: GAGAGACCCGGCTATAGAGCAGGAGTGGCGGCACCT...TTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470177.5
CDS-3UTR CCA 90 bp TCCACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCGCTTCTGGATCACAATaGTGGTCCTCTGTGAAATCT +
Preference number: 4 (lower is better)
Translates to: STLSRLLVSLNSAVTLAVASGSQ*WSSVKS
Trigger: AGATTTCACAGAGGACCACCATTGTGATCCAGAAGC...GACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp ACAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGTTCACCAGCACAGTGTaGCGTCAAACCATTCAGATA +
Preference number: 4 (lower is better)
Translates to: TGSSYKESAPDCGFQPVLFTSTV*RQTIQI
Trigger: TATCTGAATGGTTTGACGCCACACTGTGCTGGTGAA...CAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp AGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCATTCACCAGCACAGTGTaGCGTCAAACCATTCAGATA +
Preference number: 4 (lower is better)
Translates to: SRLLVSLNSAVTLAVHSAFTSTV*RQTIQI
Trigger: TATCTGAATGGTTTGACGCCACACTGTGCTGGTGAA...TGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCGCTTGATGGAGGTATCCCTTTTTGCTCGTaGGTTCATCATTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: LLIVVSSQFCRELPLDGGIPFCS*VHHLVM
Trigger: CATCACCAAATGATGAACCCACGAGCAAAAAGGGAT...ACCTCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR CCA 90 bp ACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCGCAGAGGTGAGCCTATaGCTATGCCTAAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: TQSPPGFFEFGCDVGCPLAEVSL*LCLRLF
Trigger: AAATAACCTTAGGCATAGCCATAGGCTCACCTCTGC...GAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR TCA 90 bp CAGCACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGCTCGGTTTGGAGTTCTaGGCGGCAGATTTAGGATCC +
Preference number: 4 (lower is better)
Translates to: QHSVASNHSDRYSQSSVRLGLEF*AADLGS
Trigger: GGATCCTAAATCTGCCGCTCAGAACTCCAAACCGAG...CCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TCTGCAGTGCCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTACCAGCTCCGTCGAATTaGCACAGGAATGTTGGGATA +
Preference number: 4 (lower is better)
Translates to: SAVPLTLGNAECCFNVHLPAPSN*HRNVGI
Trigger: TATCCCAACATTCCTGTGTCAATTCGACGGAGCTGG...TAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp ACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACCCAGTAAGGCATAGATaGTACAGAATATTTTGCCGC +
Preference number: 4 (lower is better)
Translates to: TLSRLLVSLNSAVTLAVHPVRHR*YRIFCR
Trigger: GCGGCAAAATATTCTGTATCATCTATGCCTTACTGG...GTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCAGGCAGAGCCACAGATGTTTCCAAATCCTaGATGAGTTCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRALQPSMCLNMIAGRATDVSKS*MSSSSS
Trigger: GGAGCTGGATGAACTCATTCAGGATTTGGAAACATC...TGTGGCTCTGCCTGCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR GCA 90 bp TTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTTATTCAGAGACGGGCTaGGCGCTCCGAGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: LLQCPSNLASISSSGIITYSETG*ALRAAR
Trigger: CCGTGCAGCTCGGAGCGCGCAGCCCGTCTCTGAATA...AGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR GCA 90 bp ACAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCTTTTCCAAATATGGTaGCTAGCTGATCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: TGSSYKESAPDCGFQPVLLFQIW*LADLQL
Trigger: GAGTTGGAGATCAGCTAGGCACCATATTTGGAAAAG...CAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp TCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTGTTTCCAGCCAGTTCTaGCGAGAGCTTCCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: SLHQHSVASNHSDRYSQSVSSQF*RELPLD
Trigger: ATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAAC...AGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp GCATCTATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGGTGCCGCCACTCCTaGTCTATAGCCGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ASISSSGIITSVILHTVSRCRHS*SIAGSL
Trigger: GAGAGACCCGGCTATAGAGCAGGAGTGGCGGCACCT...GGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp TCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATACGAGAGCCTCGGTTTaGAGTTCTGAGCGGCAGATT +
Preference number: 4 (lower is better)
Translates to: SQSQQSLHQHSVASNHSDTRASV*SSERQI
Trigger: AATCTGCCGCTCAGAACTCCAAACCGAGGCTCTCGT...ATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp GTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGTCTGGATCACAATGGTaGTCCTCTGTGAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: VSLNSAVTLAVHSAACALSGSQW*SSVKSH
Trigger: ATGAGATTTCACAGAGGACCACCATTGTGATCCAGA...CAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp TACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCATGAATGTTTGCTTCTaGATCACAATGGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YKESAPDCGFQPVLPRASMNVCF*ITMVVL
Trigger: GAGGACCACCATTGTGATCCAGAAGCAAACATTCAT...GGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp TCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATAGACATCCCTCTCGCTaGTCAGGTGGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: SQSQQSLHQHSVASNHSDRHPSR*SGGSLT
Trigger: TGTCAGTGAACCACCTGACCAGCGAGAGGGATGTCT...ATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACAGAAGTCCTCACCTATaGCTATGCCTAAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: RELPLDGGGPLELVINLHRSPHL*LCLRLF
Trigger: AAATAACCTTAGGCATAGCCATAGGTGAGGACTTCT...GTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467031.5
CDS-3UTR CCA 90 bp TACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCATCCCTTTTTGCTCGTaGGTTCATCATTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: YKESAPDCGFQPVLPRASIPFCS*VHHLVM
Trigger: CATCACCAAATGATGAACCCACGAGCAAAAAGGGAT...GGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR TCA 90 bp GATCCAGAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCCTCGGTTTGGAGTTCTaGGCGGCAGATTTAGGATCC +
Preference number: 4 (lower is better)
Translates to: DPEPHDRLIEVQIFNIGSLGLEF*AADLGS
Trigger: GGATCCTAAATCTGCCGCTCAGAACTCCAAACCGAG...GGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTCTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCAAATGGTGGTCCTCTGTaGAATCTCATGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LMFSITAISSPAQCGVKPNGGPL*NLMRLL
Trigger: GAGCAGCCTCATGAGATTTCACAGAGGACCACCATT...TGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CTGACAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTAGGAATGTTGGGATATaGATGTTTGCTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: LTGSSYKESAPDCGFQPVRNVGI*MFASGS
Trigger: TGATCCAGAAGCAAACATTCATATCCCAACATTCCT...AACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp GAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCACCTGCCCAGCTCCGTCGAATTaGCACAGGAATGTTGGGATA +
Preference number: 4 (lower is better)
Translates to: EPHDRLIEVQIFNIGSTCPAPSN*HRNVGI
Trigger: TATCCCAACATTCCTGTGTCAATTCGACGGAGCTGG...GCAGGTGGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CAGCACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGAATATGGTGCCTAGCTaGTCTCCAACTCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: QHSVASNHSDRYSQSSVRNMVPS*SPTPAK
Trigger: CTTGGCTGGAGTTGGAGATCAGCTAGGCACCATATT...CCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp GATCCAGAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCCAAGGAGTCAGCTCCTaGTTGTGGTTTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DPEPHDRLIEVQIFNIGSQGVSS*LWFPAS
Trigger: ACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTG...GGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTCTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR TCA 90 bp TTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTAAAGGTCAGGTGGTTCACTaGCAGGGTCCTCCTACAAGG +
Preference number: 4 (lower is better)
Translates to: FTHCFQQGMVFKWENWGKGQVVH*QGPPTR
Trigger: CCTTGTAGGAGGACCCTGTCAGTGAACCACCTGACC...TTTACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp AAAATAAATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCATGAGGCTGCTCCAATaGTTTGAACACGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KINGVQGTPAFYVFEYDRMRLLQ*FEHGGS
Trigger: GGAGCCACCGTGTTCAAAGCATTGGAGCAGCCTCAT...GCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR GCA 90 bp AGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTATGAGGCTGCTCCAATaGTTTGAACACGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: REGYLMFSITAISSPAQCMRLLQ*FEHGGS
Trigger: GGAGCCACCGTGTTCAAAGCATTGGAGCAGCCTCAT...ACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp CGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACAATCCCTGCATTTATTaGTGCCACTATTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: RELPLDGGGPLELVINLHNPCIY*CHYLLN
Trigger: ATTCAGCAAATAGTGGCAGCAATAAATGCAGGGATT...GTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR GCA 90 bp AGTCAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCAATATCGGATCCACCTaGAACGTAGTCACCAAATCC +
Preference number: 4 (lower is better)
Translates to: SQINTQRGHLCTSFLCSANIGST*NVVTKS
Trigger: GGATTTGGTGACTACGTTGCAGGTGGATCCGATATT...GGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp GATCCAGAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCACGAGAGCCTCGGTTTaGAGTTCTGAGCGGCAGATT +
Preference number: 4 (lower is better)
Translates to: DPEPHDRLIEVQIFNIGSTRASV*SSERQI
Trigger: AATCTGCCGCTCAGAACTCCAAACCGAGGCTCTCGT...GGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTCTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp GATCCAGAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCGCACTGTGGGTTTCGTaGAAAACGAGAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: DPEPHDRLIEVQIFNIGSALWVS*KTRASV
Trigger: AACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGC...GGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTCTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGGAGGGGAAGCAAGCACTGTaGGTTTCGTGGAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: HSVASNHSDRYSQSSVREGKQAL*VSWKTR
Trigger: TCTCGTTTTCCACGAAACCCACAGTGCTTGCTTCCC...CTCCCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp AATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCAGGCAGTCTGGATCACAATGGTaGTCCTCTGTGAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: NGVQGTPAFYVFEYDRRQSGSQW*SSVKSH
Trigger: ATGAGATTTCACAGAGGACCACCATTGTGATCCAGA...CTGCCTGCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp AATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCAGGCAGATGAATGTTTGCTTCTaGATCACAATGGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: NGVQGTPAFYVFEYDRRQMNVCF*ITMVVL
Trigger: GAGGACCACCATTGTGATCCAGAAGCAAACATTCAT...CTGCCTGCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCTTGACACAGGAATGTTaGGATATGAATGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: QGPPTRSQLLIVVSSQFCLTQEC*DMNVCF
Trigger: GAAGCAAACATTCATATCCCAACATTCCTGTGTCAA...GCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp GATCCAGAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCAATGGTGGTCCTCTGTaGAATCTCATGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DPEPHDRLIEVQIFNIGSNGGPL*NLMRLL
Trigger: GAGCAGCCTCATGAGATTTCACAGAGGACCACCATT...GGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTCTGGATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR TCA 90 bp AATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCAGGCAGAGGAATGTTGGGATATaGATGTTTGCTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: NGVQGTPAFYVFEYDRRQRNVGI*MFASGS
Trigger: TGATCCAGAAGCAAACATTCATATCCCAACATTCCT...CTGCCTGCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTGGCATGCTGCCACTATTTGCTaGATGAGTTCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLTLGNAECCFNVHLIWHAATIC*MSSSSS
Trigger: GGAGCTGGATGAACTCATTCAGCAAATAGTGGCAGC...ATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp AAAATAAATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCAATATGGTGCCTAGCTaGTCTCCAACTCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KINGVQGTPAFYVFEYDRNMVPS*SPTPAK
Trigger: CTTGGCTGGAGTTGGAGATCAGCTAGGCACCATATT...GCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR TCA 90 bp AGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTAATATGGTGCCTAGCTaGTCTCCAACTCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: REGYLMFSITAISSPAQCNMVPS*SPTPAK
Trigger: CTTGGCTGGAGTTGGAGATCAGCTAGGCACCATATT...ACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp ACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACATGCGAATCTTGGTCTaGCTAACATTCCACTTAATA +
Preference number: 4 (lower is better)
Translates to: TLSRLLVSLNSAVTLAVHMRILV*LTFHLI
Trigger: TATTAAGTGGAATGTTAGTCAGACCAAGATTCGCAT...GTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR TCA 90 bp GAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCACCTGCTTTCCAAATCCTGAATaGGTTCATCCAGCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: EPHDRLIEVQIFNIGSTCFPNPE*VHPAPS
Trigger: CGACGGAGCTGGATGAACTCATTCAGGATTTGGAAA...GCAGGTGGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR GCA 90 bp AGAGATGAATTATGCCTGCAATCTGCATTTTTCCATGTGCAAAGTCACAGTGATCCACTCAGCAGCGTGTaGTCTGAACTCTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: RDELCLQSAFFHVQSHSDPLSSV*SELSHL
Trigger: GAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGG...ATCACTGTGACTTTGCACATGGAAAAATGCAGATTGCAGGCATAATTCATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR GCA 90 bp GCTTATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAAATCCAGCAAGTCAGGTaGCGCCACTCCTGCTCTATA +
Preference number: 4 (lower is better)
Translates to: AYRSPDIQYRIHLQRSHQIQQVR*RHSCSI
Trigger: TATAGAGCAGGAGTGGCGGCACCTGACTTGCTGGAT...TTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTATAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470177.5
CDS-3UTR GCA 90 bp AGTCAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCGGCAACGCTGAGTGTTaGTTCAATGTCCATCTAATT +
Preference number: 4 (lower is better)
Translates to: SQINTQRGHLCTSFLCSAGNAEC*FNVHLI
Trigger: AATTAGATGGACATTGAAGCAACACTCAGCGTTGCC...GGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp TTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTAAAAGAAGGCTAGGACTGTaGCCTGCACTCACCACTGTG +
Preference number: 4 (lower is better)
Translates to: FTHCFQQGMVFKWENWGKRRLGL*PALTTV
Trigger: CACAGTGGTGAGTGCAGGGCACAGTCCTAGCCTTCT...TTTACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp TCATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGACGAGAGCCTCGGTTTaGAGTTCTGAGCGGCAGATT +
Preference number: 4 (lower is better)
Translates to: SFYTLFPARYGIQMGELGTRASV*SSERQI
Trigger: AATCTGCCGCTCAGAACTCCAAACCGAGGCTCTCGT...CCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp GTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGTTGACACAGGAATGTTaGGATATGAATGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSLNSAVTLAVHSAACALLTQEC*DMNVCF
Trigger: GAAGCAAACATTCATATCCCAACATTCCTGTGTCAA...CAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTAAACTCGGTTTGGAGTTCTaGGCGGCAGATTTAGGATCC +
Preference number: 4 (lower is better)
Translates to: FTHCFQQGMVFKWENWGKLGLEF*AADLGS
Trigger: GGATCCTAAATCTGCCGCTCAGAACTCCAAACCGAG...TTTACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp CATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTAATGGTGGTCCTCTGTaGAATCTCATGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: HFTHCFQQGMVFKWENWGNGGPL*NLMRLL
Trigger: GAGCAGCCTCATGAGATTTCACAGAGGACCACCATT...ACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp CATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTCCACTATTTGCTGAATaGGTTCATCCAGCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: HFTHCFQQGMVFKWENWGPLFAE*VHPAPS
Trigger: CGACGGAGCTGGATGAACTCATTCAGCAAATAGTGG...ACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp GCATCAGACATTGCTTGTCATTCCACTCATCAAAGAAAGTGGACCGTTCAACAAAATATGGTGCCTAGCTaGTCTCCAACTCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ASDIACHSTHQRKWTVQQNMVPS*SPTPAK
Trigger: CTTGGCTGGAGTTGGAGATCAGCTAGGCACCATATT...TTGTTGAACGGTCCACTTTCTTTGATGAGTGGAATGACAAGCAATGTCTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp GGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATTCACAAGGAGTCAGCTCCTaGTTGTGGTTTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GIITSVILHTVSSKVWYSQGVSS*LWFPAS
Trigger: ACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTG...TGAATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp TCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTTTTGCCGCCTTCTGTaGGTGGTGAGATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SSGIITSVILHTVSSKVWFCRLL*VVRCFQ
Trigger: TTGGAAACATCTCACCACGCACAGAAGGCGGCAAAA...CCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp AGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTTTTTGCCGCCTTCTGTaGGTGGTGAGATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: REGYLMFSITAISSPAQCFCRLL*VVRCFQ
Trigger: TTGGAAACATCTCACCACGCACAGAAGGCGGCAAAA...ACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR GCA 90 bp CATTGTTACCAGAAACAATTCTCATTCATTCTGAGGCCTTATGGCACATTAGGGATCCAGCAAGTCAGGTaGCGCCACTCCTGCTCTATA +
Preference number: 4 (lower is better)
Translates to: HCYQKQFSFILRPYGTLGIQQVR*RHSCSI
Trigger: TATAGAGCAGGAGTGGCGGCACCTGACTTGCTGGAT...CCCTAATGTGCCATAAGGCCTCAGAATGAATGAGAATTGTTTCTGGTAACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp GCATCAGACATTGCTTGTCATTCCACTCATCAAAGAAAGTGGACCGTTCAACAAGGGAAGCAAGCACTGTaGGTTTCGTGGAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: ASDIACHSTHQRKWTVQQGKQAL*VSWKTR
Trigger: TCTCGTTTTCCACGAAACCCACAGTGCTTGCTTCCC...TTGTTGAACGGTCCACTTTCTTTGATGAGTGGAATGACAAGCAATGTCTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp CCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTGGCATCCACCAGGAATATCGTaGAGACCGTCTTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: PLTLGNAECCFNVHLIWHPPGIS*RPSSIS
Trigger: TGAAATGGAAGACGGTCTCCACGATATTCCTGGTGG...ATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp TTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCAGCTTCTGGATCACAATaGTGGTCCTCTGTGAAATCT +
Preference number: 4 (lower is better)
Translates to: LMFSITAISSPAQCGVKPASGSQ*WSSVKS
Trigger: AGATTTCACAGAGGACCACCATTGTGATCCAGAAGC...TGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp TCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCAGGCAGAGCCACATTGACACAGGAATGTTaGGATATGAATGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRALQPSMCLNMIAGRATLTQEC*DMNVCF
Trigger: GAAGCAAACATTCATATCCCAACATTCCTGTGTCAA...TGTGGCTCTGCCTGCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp GGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAGACATCCCTCTCGCTaGTCAGGTGGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: GIITSVILHTVSSKVWYSRHPSR*SGGSLT
Trigger: TGTCAGTGAACCACCTGACCAGCGAGAGGGATGTCT...TGAATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp AGTCAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCGTTGTCATCCATAAATaGTCCATATCTAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: SQINTQRGHLCTSFLCSAVVIHK*SISRLS
Trigger: ACTGAGCCTAGATATGGACCATTTATGGATGACAAC...GGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
3UTR CAA 72 bp GAGGAAAACAGTCTGGGCACAAAAAGGCATCAGACATaGCTTGTCATTCCACTCATCAAAGAAAGTGGACCG +
Preference number: 4 (lower is better)
Translates to: EENSLGTKRHQT*LVIPLIKESGP
Trigger: CGGTCCACTTTCTTTGATGAGTGGAATGACAAGCAATGTCTGATGCCTTTTTGTGCCCAGACTGTTTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp ATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAAATCCCTCTGTGAAATCTCATaGGGCTGCTCCAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: IEVQIFNIGSTCNVVTKSLCEIS*GCSNAL
Trigger: CAAAGCATTGGAGCAGCCTCATGAGATTTCACAGAG...GGATTTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CAGCACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGCCAGTAAGGCATAGATaGTACAGAATATTTTGCCGC +
Preference number: 4 (lower is better)
Translates to: QHSVASNHSDRYSQSSVRPVRHR*YRIFCR
Trigger: GCGGCAAAATATTCTGTATCATCTATGCCTTACTGG...CCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp CACCAGCACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTACCAGTAAGGCATAGATaGTACAGAATATTTTGCCGC +
Preference number: 4 (lower is better)
Translates to: HQHSVASNHSDRYSQSSVPVRHR*YRIFCR
Trigger: GCGGCAAAATATTCTGTATCATCTATGCCTTACTGG...TACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp ATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGATTAGGCGCTGGGAAGCATaGGGCATGCAGCATTCAAAA +
Preference number: 4 (lower is better)
Translates to: MIAGRATKSTQPNSINMIRRWEA*GMQHSK
Trigger: TTTTGAATGCTGCATGCCTCATGCTTCCCAGCGCCT...AATCATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470177.5
CDS-3UTR GCA 90 bp TATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAATGAGGCTGCTCCAATaGTTTGAACACGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: YFIFGHHHFSHFTHCFQQMRLLQ*FEHGGS
Trigger: GGAGCCACCGTGTTCAAAGCATTGGAGCAGCCTCAT...TTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp AGTCAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCTCATCAGAAAGAAAGTaGTGGCTCAGAATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SQINTQRGHLCTSFLCSASSERK*WLRIPN
Trigger: ATTTGGAATTCTGAGCCAGCACTTTCTTTCTGATGA...GGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR GCA 90 bp ATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGCCCAACTTCAACTTCTaGCCTCACAGCCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: ISSSGIITSVILHTVSSKPNFNF*PHSQVT
Trigger: TGTGACTTGGCTGTGAGGGCAGAAGTTGAAGTTGGG...CTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR GCA 90 bp AGTCAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCGTCAGAGATGAATTATaGCTGCAATCTGCATTTTTC +
Preference number: 4 (lower is better)
Translates to: SQINTQRGHLCTSFLCSAVRDEL*LQSAFF
Trigger: GAAAAATGCAGATTGCAGGCATAATTCATCTCTGAC...GGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp TGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTTGCACTGTGGGTTTCGTaGAAAACGAGAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: CFNVHLIWHLFHLRASSLALWVS*KTRASV
Trigger: AACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGC...AAGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp GCTTATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAACCACCAGGAATATCGTaGAGACCGTCTTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: AYRSPDIQYRIHLQRSHQPPGIS*RPSSIS
Trigger: TGAAATGGAAGACGGTCTCCACGATATTCCTGGTGG...TTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp AAAATAAATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCGCTTCTGGATCACAATaGTGGTCCTCTGTGAAATCT +
Preference number: 4 (lower is better)
Translates to: KINGVQGTPAFYVFEYDRASGSQ*WSSVKS
Trigger: AGATTTCACAGAGGACCACCATTGTGATCCAGAAGC...GCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CACCAGCACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAATGAATGTTTGCTTCTaGATCACAATGGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: HQHSVASNHSDRYSQSSVMNVCF*ITMVVL
Trigger: GAGGACCACCATTGTGATCCAGAAGCAAACATTCAT...TACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp ATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTACCACCTCCTCTCATCTaGCAAAAGTCACCCAACGAA +
Preference number: 4 (lower is better)
Translates to: ILHTVSSKVWYSNGRTGVPPPLI*QKSPNE
Trigger: TTCGTTGGGTGACTTTTGCCAGATGAGAGGAGGTGG...TACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp ATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGCTCTGTGAAATCTCATaGGGCTGCTCCAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: ISSSGIITSVILHTVSSKLCEIS*GCSNAL
Trigger: CAAAGCATTGGAGCAGCCTCATGAGATTTCACAGAG...CTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp TCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTAGGAATGTTGGGATATaGATGTTTGCTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: SLHQHSVASNHSDRYSQSRNVGI*MFASGS
Trigger: TGATCCAGAAGCAAACATTCATATCCCAACATTCCT...AGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTCCAGCTCCGTCGAATTaGCACAGGAATGTTGGGATA +
Preference number: 4 (lower is better)
Translates to: LLQCPSNLASISSSGIITPAPSN*HRNVGI
Trigger: TATCCCAACATTCCTGTGTCAATTCGACGGAGCTGG...AGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp TCTGCAGTGCCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTTGTTCCCCCTTTaGGCTCATGCACAATTTAAA +
Preference number: 4 (lower is better)
Translates to: SAVPLTLGNAECCFNVHLILFPL*AHAQFK
Trigger: TTTAAATTGTGCATGAGCTCAAAGGGGGAACAAAAT...TAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGGCACTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp TGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTTAACGCTAGGCAACGCTaGGTGTTGCTTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: CFNVHLIWHLFHLRASSLNARQR*VLLQCP
Trigger: TGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTT...AAGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp AAAATAAATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCCTTTTCCAAATATGGTaGCTAGCTGATCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: KINGVQGTPAFYVFEYDRLFQIW*LADLQL
Trigger: GAGTTGGAGATCAGCTAGGCACCATATTTGGAAAAG...GCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR GCA 90 bp CCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTGGCATCTTTTCCAAATATGGTaGCTAGCTGATCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: PLTLGNAECCFNVHLIWHLFQIW*LADLQL
Trigger: GAGTTGGAGATCAGCTAGGCACCATATTTGGAAAAG...ATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp ATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAAATCCAATATCGGATCCACCTaGAACGTAGTCACCAAATCC +
Preference number: 4 (lower is better)
Translates to: IEVQIFNIGSTCNVVTKSNIGST*NVVTKS
Trigger: GGATTTGGTGACTACGTTGCAGGTGGATCCGATATT...GGATTTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR GCA 90 bp TCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTGTAGAAATCCCTTTTTaGTCGTGGGTTCATCATTTG +
Preference number: 4 (lower is better)
Translates to: SLHQHSVASNHSDRYSQSVEIPF*SWVHHL
Trigger: CAAATGATGAACCCACGAGCAAAAAGGGATTTCTAC...AGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR GCA 90 bp TCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATGTGAGCCTATGGCTATaGCTAAGGTTATTTAAAGAG +
Preference number: 4 (lower is better)
Translates to: SQSQQSLHQHSVASNHSDVSLWL*LRLFKE
Trigger: CTCTTTAAATAACCTTAGGCATAGCCATAGGCTCAC...ATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR CCA 90 bp TCATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGGAGAGGAAAACAGTCTaGGCACAAAAAGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: SFYTLFPARYGIQMGELGERKTV*AQKGIR
Trigger: TCTGATGCCTTTTTGTGCCCAGACTGTTTTCCTCTC...CCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp TCATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTTCAAATGGGAGAACTaGGGTAAAAGACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SFYTLFPARYGIQMGELGFKWEN*GKRLQR
Trigger: CCTCTGCAGTCTTTTACCCCAGTTCTCCCATTTGAA...CCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp ATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGATTCTCTGTGAAATCTCATaGGGCTGCTCCAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: MIAGRATKSTQPNSINMILCEIS*GCSNAL
Trigger: CAAAGCATTGGAGCAGCCTCATGAGATTTCACAGAG...AATCATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR TCA 90 bp TTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTAAACCAAATCCCAGTGACTaGTTTGATTGGAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: FTHCFQQGMVFKWENWGKPNPSD*FDWRCF
Trigger: GAAACACCTCCAATCAAATCAGTCACTGGGATTTGG...TTTACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp TTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTGCCTTCTGTGCGTGGTaGGATGTTTCCAAATCCTAT +
Preference number: 4 (lower is better)
Translates to: LLQCPSNLASISSSGIITAFCAW*DVSKSY
Trigger: ATAGGATTTGGAAACATCTCACCACGCACAGAAGGC...AGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp TCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGAAAGAGAGGGCTATTTaGTGTTCTCAATCACAGCAA +
Preference number: 4 (lower is better)
Translates to: SSGIITSVILHTVSSKVWKERAI*CSQSQQ
Trigger: TTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTT...CCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp AGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTAAAGAGAGGGCTATTTaGTGTTCTCAATCACAGCAA +
Preference number: 4 (lower is better)
Translates to: REGYLMFSITAISSPAQCKERAI*CSQSQQ
Trigger: TTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTT...ACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR TCA 90 bp ATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTATGTGCAAAGTCACAGTaGTCCCAACTTCAACTTCTG +
Preference number: 4 (lower is better)
Translates to: ILHTVSSKVWYSNGRTGVCAKSQ*SQLQLL
Trigger: CAGAAGTTGAAGTTGGGATCACTGTGACTTTGCACA...TACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR GCA 90 bp TTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCAAATCCCTGCATTTATTaGTGCCACTATTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LMFSITAISSPAQCGVKPNPCIY*CHYLLN
Trigger: ATTCAGCAAATAGTGGCAGCAATAAATGCAGGGATT...TGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR GCA 90 bp ATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGATTTTTTGCCGCCTTCTGTaGGTGGTGAGATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: MIAGRATKSTQPNSINMIFCRLL*VVRCFQ
Trigger: TTGGAAACATCTCACCACGCACAGAAGGCGGCAAAA...AATCATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR GCA 90 bp AATATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGTTTTGCCGCCTTCTGTaGGTGGTGAGATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: NMIAGRATKSTQPNSINMFCRLL*VVRCFQ
Trigger: TTGGAAACATCTCACCACGCACAGAAGGCGGCAAAA...CATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR GCA 90 bp AGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTCCTCACCTATGGCTATaGCTAAGGTTATTTAAAGAG +
Preference number: 4 (lower is better)
Translates to: REGYLMFSITAISSPAQCPHLWL*LRLFKE
Trigger: CTCTTTAAATAACCTTAGGCATAGCCATAGGTGAGG...ACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467031.5
CDS-3UTR GCA 90 bp ACTGTATATATGTACCACTGGTACCTGAGTCAAATAAATACTCAGAGGGGCCACGGCAACGCTGAGTGTTaGTTCAATGTCCATCTAATT +
Preference number: 4 (lower is better)
Translates to: TVYMYHWYLSQINTQRGHGNAEC*FNVHLI
Trigger: AATTAGATGGACATTGAAGCAACACTCAGCGTTGCC...GTGGCCCCTCTGAGTATTTATTTGACTCAGGTACCAGTGGTACATATATACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp TATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAACCACCAGGAATATCGTaGAGACCGTCTTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: YFIFGHHHFSHFTHCFQQPPGIS*RPSSIS
Trigger: TGAAATGGAAGACGGTCTCCACGATATTCCTGGTGG...TTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp GGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAGCTTCTGGATCACAATaGTGGTCCTCTGTGAAATCT +
Preference number: 4 (lower is better)
Translates to: GIITSVILHTVSSKVWYSASGSQ*WSSVKS
Trigger: AGATTTCACAGAGGACCACCATTGTGATCCAGAAGC...TGAATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp AAGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTTCCTTTTCCAAATATaGTGCCTAGCTGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: KRGLFDVLNHSNLFTSTVFLFQI*CLADLQ
Trigger: TTGGAGATCAGCTAGGCACCATATTTGGAAAAGGAA...CACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CCA 90 bp CAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCTTTAATGTCCATCTAATTTaGCATCTATTTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: QINTQRGHLCTSFLCSAFNVHLI*HLFHLR
Trigger: CCGAAGATGAAATAGATGCCAAATTAGATGGACATT...AAAGGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp TCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGATGCGAATCTTGGTCTaGCTAACATTCCACTTAATA +
Preference number: 4 (lower is better)
Translates to: SSGIITSVILHTVSSKVWMRILV*LTFHLI
Trigger: TATTAAGTGGAATGTTAGTCAGACCAAGATTCGCAT...CCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp CCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTGGCATTTCAAGACCCTAATCTaGATGCCACTTATTCAGATA +
Preference number: 4 (lower is better)
Translates to: PLTLGNAECCFNVHLIWHFKTLI*MPLIQI
Trigger: TATCTGAATAAGTGGCATTCAGATTAGGGTCTTGAA...ATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp TCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATTTCGGAACAGTTATTTaGGGAAATGGGTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: SGIITSVILHTVSSKVWYFGTVI*GNGCSF
Trigger: AAAGCTACACCCATTTCCTCAAATAACTGTTCCGAA...ATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR GCA 90 bp TGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTTAATATCGGATCCACCTaGAACGTAGTCACCAAATCC +
Preference number: 4 (lower is better)
Translates to: CFNVHLIWHLFHLRASSLNIGST*NVVTKS
Trigger: GGATTTGGTGACTACGTTGCAGGTGGATCCGATATT...AAGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp ATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAAATCCGTAGAAATCCCTTTTTaGTCGTGGGTTCATCATTTG +
Preference number: 4 (lower is better)
Translates to: IEVQIFNIGSTCNVVTKSVEIPF*SWVHHL
Trigger: CAAATGATGAACCCACGAGCAAAAAGGGATTTCTAC...GGATTTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR GCA 90 bp CCTTTAACGCTAGGCAACGCTGAGTGTTGCTTCAATGTCCATCTAATTTGGCATGAGATGAATTATGCCTaGAATCTGCATTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: PLTLGNAECCFNVHLIWHEMNYA*NLHFSM
Trigger: CATGGAAAAATGCAGATTGCAGGCATAATTCATCTC...ATGCCAAATTAGATGGACATTGAAGCAACACTCAGCGTTGCCTAGCGTTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp CATTGTTACCAGAAACAATTCTCATTCATTCTGAGGCCTTATGGCACATTAGGGTCTGGATCACAATGGTaGTCCTCTGTGAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: HCYQKQFSFILRPYGTLGSGSQW*SSVKSH
Trigger: ATGAGATTTCACAGAGGACCACCATTGTGATCCAGA...CCCTAATGTGCCATAAGGCCTCAGAATGAATGAGAATTGTTTCTGGTAACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp TCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTTGACACAGGAATGTTaGGATATGAATGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSGIITSVILHTVSSKVWLTQEC*DMNVCF
Trigger: GAAGCAAACATTCATATCCCAACATTCCTGTGTCAA...CCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp ACTGTATATATGTACCACTGGTACCTGAGTCAAATAAATACTCAGAGGGGCCACTTCCTTTTCCAAATATaGTGCCTAGCTGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: TVYMYHWYLSQINTQRGHFLFQI*CLADLQ
Trigger: TTGGAGATCAGCTAGGCACCATATTTGGAAAAGGAA...GTGGCCCCTCTGAGTATTTATTTGACTCAGGTACCAGTGGTACATATATACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp TATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAATTCACCAGCACAGTGTaGCGTCAAACCATTCAGATA +
Preference number: 4 (lower is better)
Translates to: YFIFGHHHFSHFTHCFQQFTSTV*RQTIQI
Trigger: TATCTGAATGGTTTGACGCCACACTGTGCTGGTGAA...TTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp ACTGTATATATGTACCACTGGTACCTGAGTCAAATAAATACTCAGAGGGGCCACAGAAGTCCTCACCTATaGCTATGCCTAAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: TVYMYHWYLSQINTQRGHRSPHL*LCLRLF
Trigger: AAATAACCTTAGGCATAGCCATAGGTGAGGACTTCT...GTGGCCCCTCTGAGTATTTATTTGACTCAGGTACCAGTGGTACATATATACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp TTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTCATTCTGAGGCCTTATaGCACATTAGGGAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLQCPSNLASISSSGIITHSEAL*HIRERE
Trigger: CTCTCTTTCCCTAATGTGCCATAAGGCCTCAGAATG...AGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp ATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGAGGAATGTTGGGATATaGATGTTTGCTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: ISSSGIITSVILHTVSSKRNVGI*MFASGS
Trigger: TGATCCAGAAGCAAACATTCATATCCCAACATTCCT...CTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp AGAGATGAATTATGCCTGCAATCTGCATTTTTCCATGTGCAAAGTCACAGTGATCCAGTAAGGCATAGATaGTACAGAATATTTTGCCGC +
Preference number: 4 (lower is better)
Translates to: RDELCLQSAFFHVQSHSDPVRHR*YRIFCR
Trigger: GCGGCAAAATATTCTGTATCATCTATGCCTTACTGG...ATCACTGTGACTTTGCACATGGAAAAATGCAGATTGCAGGCATAATTCATCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR TCA 90 bp ATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGATTCCAGTAAGGCATAGATaGTACAGAATATTTTGCCGC +
Preference number: 4 (lower is better)
Translates to: MIAGRATKSTQPNSINMIPVRHR*YRIFCR
Trigger: GCGGCAAAATATTCTGTATCATCTATGCCTTACTGG...AATCATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR GCA 90 bp TTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTCTTTTCCAAATATGGTaGCTAGCTGATCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: LLQCPSNLASISSSGIITLFQIW*LADLQL
Trigger: GAGTTGGAGATCAGCTAGGCACCATATTTGGAAAAG...AGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp ATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGCCTCACCTATGGCTATaGCTAAGGTTATTTAAAGAG +
Preference number: 4 (lower is better)
Translates to: ISSSGIITSVILHTVSSKPHLWL*LRLFKE
Trigger: CTCTTTAAATAACCTTAGGCATAGCCATAGGTGAGG...CTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR GCA 90 bp GCATCTATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAAAGGCATCAGACATTaGTTGTCATTCCACTCATCA +
Preference number: 4 (lower is better)
Translates to: ASISSSGIITSVILHTVSKGIRH*LSFHSS
Trigger: TGATGAGTGGAATGACAAGCAATGTCTGATGCCTTT...GGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp AATATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGTCTGGATCACAATGGTaGTCCTCTGTGAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: NMIAGRATKSTQPNSINMSGSQW*SSVKSH
Trigger: ATGAGATTTCACAGAGGACCACCATTGTGATCCAGA...CATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp TGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTTATGAATGTTTGCTTCTaGATCACAATGGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CFNVHLIWHLFHLRASSLMNVCF*ITMVVL
Trigger: GAGGACCACCATTGTGATCCAGAAGCAAACATTCAT...AAGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp ATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGATTATGAATGTTTGCTTCTaGATCACAATGGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: MIAGRATKSTQPNSINMIMNVCF*ITMVVL
Trigger: GAGGACCACCATTGTGATCCAGAAGCAAACATTCAT...AATCATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp GGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATTCATTCCTTTTCCAAATATaGTGCCTAGCTGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: GIITSVILHTVSSKVWYSFLFQI*CLADLQ
Trigger: TTGGAGATCAGCTAGGCACCATATTTGGAAAAGGAA...TGAATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp ATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGGTATGGTATTCAAATaGGAGAACTGGGGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: ISSSGIITSVILHTVSSKGMVFK*ENWGKR
Trigger: TCTTTTACCCCAGTTCTCCCATTTGAATACCATACC...CTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR TCA 90 bp TTGCTTCAATGTCCATCTAATTTGGCATCTATTTCATCTTCGGGCATCATCACTAGGAATGTTGGGATATaGATGTTTGCTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: LLQCPSNLASISSSGIITRNVGI*MFASGS
Trigger: TGATCCAGAAGCAAACATTCATATCCCAACATTCCT...AGTGATGATGCCCGAAGATGAAATAGATGCCAAATTAGATGGACATTGAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR GCA 90 bp GGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAATTATGCCTGCAATCTaGATTTTTCCATGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GIITSVILHTVSSKVWYSIMPAI*IFPCAK
Trigger: CTTTGCACATGGAAAAATGCAGATTGCAGGCATAAT...TGAATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp ATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTATTGACACAGGAATGTTaGGATATGAATGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ILHTVSSKVWYSNGRTGVLTQEC*DMNVCF
Trigger: GAAGCAAACATTCATATCCCAACATTCCTGTGTCAA...TACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CCA 90 bp GGTTATTTAAAGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCTTCCTTTTCCAAATATaGTGCCTAGCTGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: GYLKRGLFDVLNHSNLFTFLFQI*CLADLQ
Trigger: TTGGAGATCAGCTAGGCACCATATTTGGAAAAGGAA...GGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTTAAATAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR CCA 90 bp ATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGATTTTCCTTTTCCAAATATaGTGCCTAGCTGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: MIAGRATKSTQPNSINMIFLFQI*CLADLQ
Trigger: TTGGAGATCAGCTAGGCACCATATTTGGAAAAGGAA...AATCATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CCA 90 bp AGAGATGAATTATGCCTGCAATCTGCATTTTTCCATGTGCAAAGTCACAGTGATGGTATGGTATTCAAATaGGAGAACTGGGGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: RDELCLQSAFFHVQSHSDGMVFK*ENWGKR
Trigger: TCTTTTACCCCAGTTCTCCCATTTGAATACCATACC...ATCACTGTGACTTTGCACATGGAAAAATGCAGATTGCAGGCATAATTCATCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CCA 90 bp ATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAAATCCAATGTCCATCTAATTTaGCATCTATTTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: IEVQIFNIGSTCNVVTKSNVHLI*HLFHLR
Trigger: CCGAAGATGAAATAGATGCCAAATTAGATGGACATT...GGATTTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR TCA 90 bp AATATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGATGCGAATCTTGGTCTaGCTAACATTCCACTTAATA +
Preference number: 4 (lower is better)
Translates to: NMIAGRATKSTQPNSINMMRILV*LTFHLI
Trigger: TATTAAGTGGAATGTTAGTCAGACCAAGATTCGCAT...CATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR GCA 90 bp CAGCCTGGTCATAATTACACTGTATATATGTACCACTGGTACCTGAGTCAAATAAATCCCTGCATTTATTaGTGCCACTATTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: QPGHNYTVYMYHWYLSQINPCIY*CHYLLN
Trigger: ATTCAGCAAATAGTGGCAGCAATAAATGCAGGGATT...TATTTGACTCAGGTACCAGTGGTACATATATACAGTGTAATTATGACCAGGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS GCA 90 bp GGTGTGTGGCACGGTCCGGGCGCCCGCAGCTCTGCAGCCCTCCGCTaGTCTCCCTTCCCGGCTCGCTCCTGTCGCCCCTTGCCGGCTCGT +
Preference number: 5 (lower is better)
Translates to: GVWHGPGARSSAALR*SPFPARSCRPLPAR
Trigger: ACGAGCCGGCAAGGGGCGACAGGAGCGAGCCGGGAAGGGAGAGCAGCGGAGGGCTGCAGAGCTGCGGGCGCCCGGACCGTGCCACACACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CAA 90 bp CGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACGCCGAGAGCTTCCGCTaGATGGAGGTGGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RELPLDGGGPLELVINLHAESFR*MEVARW
Trigger: CCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGC...GTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp CAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCGCTTGATGGAGCCGAGAGCTTCCGCTaGATGGAGGTGGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: QLLIVVSSQFCRELPLDGAESFR*MEVARW
Trigger: CCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGC...TCCATCAAGCGGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp TGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCCACCTCTTCGGCTGCTCCAATGCTTaGAACACGGTGGCTCCGATG +
Preference number: 5 (lower is better)
Translates to: CDVGCPLSSVCSELSHLFGCSNA*NTVAPM
Trigger: CATCGGAGCCACCGTGTTCAAAGCATTGGAGCAGCC...GAAGAGGTGGGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS GCA 90 bp CGGTTTGGAGTTCTGAGCGGCAGATTTAGGATCCAGCAAGTCAGGTaGCGCCACTGGAGCCAGGGCGAAGACATCAAGGAGGGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: RFGVLSGRFRIQQVR*RHWSQGEDIKEGKK
Trigger: TTTCTTCCCCTCCTTGATGTCTTCGCCCTGGCTCCAGTGGCGGCACCTGACTTGCTGGATCCTAAATCTGCCGCTCAGAACTCCAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478774.5
CDS TCA 90 bp AGCACTGTGGGTTTCGTGGAAAACGAGAGCCTCGGTTTGGAGTTCTaGGCGGCAGATTTAGGATCCAGCAAGTCAGGTGCCGCCACTCCT +
Preference number: 5 (lower is better)
Translates to: STVGFVENESLGLEF*AADLGSSKSGAATP
Trigger: AGGAGTGGCGGCACCTGACTTGCTGGATCCTAAATCTGCCGCTCAGAACTCCAAACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000470177.5
CDS TCA 90 bp GGCGTGGAGAGGATCTGGCAAGGGTTTGCCTCCAAATCCAGATTATaGCCCAACACTTTGGACGCGAAGCGAAGATGGGAAACGGCCGCT +
Preference number: 5 (lower is better)
Translates to: GVERIWQGFASKSRL*PNTLDAKRRWETAA
Trigger: AGCGGCCGTTTCCCATCTTCGCTTCGCGTCCAAAGTGTTGGGTCATAATCTGGATTTGGAGGCAAACCCTTGCCAGATCCTCTCCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457122.1
CDS TCA 90 bp AGCACTGTGGGTTTCGTGGAAAACGAGAGCCTCGGTTTGGAGTTCTaGGCGGCAGATTTAGGATCCAGCAAGTCAGGTGCCGCCACTCAG +
Preference number: 5 (lower is better)
Translates to: STVGFVENESLGLEF*AADLGSSKSGAATQ
Trigger: CTGAGTGGCGGCACCTGACTTGCTGGATCCTAAATCTGCCGCTCAGAACTCCAAACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457122.1
CDS TCA 90 bp AGCACTGTGGGTTTCGTGGAAAACGAGAGCCTCGGTTTGGAGTTCTaGGCGGCAGATTTAGGATCCAGCAAGTCAGGTGCCGCCACTGGA +
Preference number: 5 (lower is better)
Translates to: STVGFVENESLGLEF*AADLGSSKSGAATG
Trigger: TCCAGTGGCGGCACCTGACTTGCTGGATCCTAAATCTGCCGCTCAGAACTCCAAACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478774.5
CDS-3UTR CAA 90 bp ACAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGGGCTGCTCCAATGCTTaGAACACGGTGGCTCCGATG +
Preference number: 5 (lower is better)
Translates to: TGSSYKESAPDCGFQPVLGCSNA*NTVAPM
Trigger: CATCGGAGCCACCGTGTTCAAAGCATTGGAGCAGCC...CAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp TACTCTCAGTCTTCAGTAAGGGAGGCAAGACATCCCTCTCGCTGGTCAGGTGGTAATTCGGCTGTGACGTaGGCTGTCCACTCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: YSQSSVREARHPSRWSGGNSAVT*AVHSAA
Trigger: CGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATT...ACCACCTGACCAGCGAGAGGGATGTCTTGCCTCCCTTACTGAAGACTGAGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp TCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATGCCGAGAGCTTCCGCTaGATGGAGGTGGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: SQSQQSLHQHSVASNHSDAESFR*MEVARW
Trigger: CCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGC...ATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp AGAGATGAATTATGCCTGCAATCTGCATTTTTCCATGTGCAAAGTCACAGTGATGAGGCGGAGGCCAAGTaGGGCTTGGGCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: RDELCLQSAFFHVQSHSDEAEAK*GLGAAA
Trigger: GGCGGCGGCGCCCAAGCCCAACTTGGCCTCCGCCTC...ATCACTGTGACTTTGCACATGGAAAAATGCAGATTGCAGGCATAATTCATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS TCA 90 bp AGCACTGTGGGTTTCGTGGAAAACGAGAGCCTCGGTTTGGAGTTCTaGGCGGCAGATTTAGGATCCAGCAAGTCAGGTGCCGCCATTCTT +
Preference number: 5 (lower is better)
Translates to: STVGFVENESLGLEF*AADLGSSKSGAAIL
Trigger: AAGAATGGCGGCACCTGACTTGCTGGATCCTAAATCTGCCGCTCAGAACTCCAAACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391894.6
ENST00000474771.5
CDS-3UTR CAA 90 bp CTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTCGCCTCCTGGTTTCTTaGAATTCGGCTGTGACGTTG +
Preference number: 5 (lower is better)
Translates to: LLVSLNSAVTLAVHSAACRLLVS*NSAVTL
Trigger: CAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCG...ACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp GCATCAGACATTGCTTGTCATTCCACTCATCAAAGAAAGTGGACCGTTCAACAAGCCGAGAGCTTCCGCTaGATGGAGGTGGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: ASDIACHSTHQRKWTVQQAESFR*MEVARW
Trigger: CCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCGGC...TTGTTGAACGGTCCACTTTCTTTGATGAGTGGAATGACAAGCAATGTCTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CAA 90 bp AGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCATCCAGCTCCGTCGAATaGACACAGGAATGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: SRLLVSLNSAVTLAVHSASSSVE*TQECWD
Trigger: ATCCCAACATTCCTGTGTCAATTCGACGGAGCTGGA...TGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTATGCGCCCCGGCGTCTTaGTGCGCGAGCCTCGTTCAG +
Preference number: 5 (lower is better)
Translates to: ILHTVSSKVWYSNGRTGVCAPAS*CASLVQ
Trigger: CTGAACGAGGCTCGCGCACAAAGACGCCGGGGCGCA...TACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CAA 90 bp CCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACACTCAGTCGCAGCCTTCTATGTGTTaGAATATGATCGCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PLDGGGPLELVINLHTQSQPSMC*NMIAGR
Trigger: TCTGCCTGCGATCATATTCAAACACATAGAAGGCTG...CGACTGAGTGTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR CAA 90 bp GAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAATTCGGCTGTGACGTaGGCTGTCCACTCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: EPHDRLIEVQIFNIGSTCNSAVT*AVHSAA
Trigger: CGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATT...GCAGGTGGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR CAA 90 bp AAGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGGGCTGCTCCAATGCTTaGAACACGGTGGCTCCGATG +
Preference number: 5 (lower is better)
Translates to: KRGLFDVLNHSNLFTSTVGCSNA*NTVAPM
Trigger: CATCGGAGCCACCGTGTTCAAAGCATTGGAGCAGCC...CACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp AGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAATGATACAGAATATTTaGCCGCCTTCTGTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: SRLLVSLNSAVTLAVHSAMIQNI*PPSVRG
Trigger: ACCACGCACAGAAGGCGGCAAAATATTCTGTATCAT...TGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp GAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGCGTGTGCTCTGAACTCTCCTTCCTCCAAGGTTTCTaGTCCGTAATTTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: EFGCDVGCPLSSVCSELSFLQGF*SVISKT
Trigger: TGTTTTGGAAATTACGGACAAGAAACCTTGGAGGAA...GGAGAGTTCAGAGCACACGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR CAA 90 bp CAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCTTTTCCAGCTCCGTCGAATaGACACAGGAATGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: QINTQRGHLCTSFLCSAFSSSVE*TQECWD
Trigger: ATCCCAACATTCCTGTGTCAATTCGACGGAGCTGGA...AAAGGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CAA 90 bp GGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCTCCAGCTCCGTCGAATaGACACAGGAATGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: GYLMFSITAISSPAQCGVSSSVE*TQECWD
Trigger: ATCCCAACATTCCTGTGTCAATTCGACGGAGCTGGA...GACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp TACTCTCAGTCTTCAGTAAGGGAGGCAAGACATCCCTCTCGCTGGTCAGGTGGTTATTGCTGCCACTATTaGCTGAATGAGTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: YSQSSVREARHPSRWSGGYCCHY*LNEFIQ
Trigger: CTGGATGAACTCATTCAGCAAATAGTGGCAGCAATA...ACCACCTGACCAGCGAGAGGGATGTCTTGCCTCCCTTACTGAAGACTGAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR CAA 90 bp CACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGGAGCGCCTCCTGGTTTCTTaGAATTCGGCTGTGACGTTG +
Preference number: 5 (lower is better)
Translates to: HSVASNHSDRYSQSSVRERLLVS*NSAVTL
Trigger: CAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCG...CTCCCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp TACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGAGCTTCCTCGTGGGTTCATCATTaGGTGATGTTTTCATCAGGA +
Preference number: 5 (lower is better)
Translates to: YKESAPDCGFQPVLPRASSWVHH*VMFSSG
Trigger: TCCTGATGAAAACATCACCAAATGATGAACCCACGA...GGAAGCTCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR CAA 90 bp CGAGAGCTTCCGCTTGATGGAGGTGGCCCGCTGGAACTTGTCATAAATCTCCACAGTAGAAATCCCTTTTaGCTCGTGGGTTCATCATTT +
Preference number: 5 (lower is better)
Translates to: RELPLDGGGPLELVINLHSRNPF*LVGSSF
Trigger: AAATGATGAACCCACGAGCAAAAAGGGATTTCTACT...GTGGAGATTTATGACAAGTTCCAGCGGGCCACCTCCATCAAGCGGAAGCTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS TCA 90 bp AATGTTTGCTTCTGGATCACAATGGTGGTCCTCTGTGAAATCTCATaGGGCTGCTCCAATGCTTTGAACACGGTGGCTCCGATGATCAGA +
Preference number: 5 (lower is better)
Translates to: NVCFWITMVVLCEIS*GCSNALNTVAPMIR
Trigger: TCTGATCATCGGAGCCACCGTGTTCAAAGCATTGGAGCAGCCTCATGAGATTTCACAGAGGACCACCATTGTGATCCAGAAGCAAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000478774.5
ENST00000486921.5
CDS TCA 90 bp TTGGGATATGAATGTTTGCTTCTGGATCACAATGGTGGTCCTCTGTaGAATCTCATGAGGCTGCTCCAATGCTTTGAACACGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LGYECLLLDHNGGPL*NLMRLLQCFEHGGS
Trigger: GGAGCCACCGTGTTCAAAGCATTGGAGCAGCCTCATGAGATTTCACAGAGGACCACCATTGTGATCCAGAAGCAAACATTCATATCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000478774.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCTTGGGATATGAATGTTaGCTTCTGGATCACAATGGT +
Preference number: 5 (lower is better)
Translates to: TQSPPGFFEFGCDVGCPLLGYEC*LLDHNG
Trigger: ACCATTGTGATCCAGAAGCAAACATTCATATCCCAA...GAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ACACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTTGGGATATGAATGTTaGCTTCTGGATCACAATGGT +
Preference number: 5 (lower is better)
Translates to: TLSRLLVSLNSAVTLAVHLGYEC*LLDHNG
Trigger: ACCATTGTGATCCAGAAGCAAACATTCATATCCCAA...GTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp TTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCATCCAGCTCCGTCGAATaGACACAGGAATGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: LMFSITAISSPAQCGVKPSSSVE*TQECWD
Trigger: ATCCCAACATTCCTGTGTCAATTCGACGGAGCTGGA...TGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGAATTCGGCTGTGACGTaGGCTGTCCACTCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: ISSSGIITSVILHTVSSKNSAVT*AVHSAA
Trigger: CGCTGCTGAGTGGACAGCCAACGTCACAGCCGAATT...CTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CAA 90 bp AGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAGGAGTCATCATGCTTTaGATCTTTAATGCCGTTCTT +
Preference number: 5 (lower is better)
Translates to: SRLLVSLNSAVTLAVHSAGVIML*IFNAVL
Trigger: AAGAACGGCATTAAAGATCAAAAGCATGATGACTCC...TGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ACTCAGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGTAGAAATCCCTTTTaGCTCGTGGGTTCATCATTT +
Preference number: 5 (lower is better)
Translates to: TQSPPGFFEFGCDVGCPLSRNPF*LVGSSF
Trigger: AAATGATGAACCCACGAGCAAAAAGGGATTTCTACT...GAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR CAA 90 bp AGAGATGAATTATGCCTGCAATCTGCATTTTTCCATGTGCAAAGTCACAGTGATGGCTGCTCCAATGCTTaGAACACGGTGGCTCCGATG +
Preference number: 5 (lower is better)
Translates to: RDELCLQSAFFHVQSHSDGCSNA*NTVAPM
Trigger: CATCGGAGCCACCGTGTTCAAAGCATTGGAGCAGCC...ATCACTGTGACTTTGCACATGGAAAAATGCAGATTGCAGGCATAATTCATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CAA 90 bp AATATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGGGCTGCTCCAATGCTTaGAACACGGTGGCTCCGATG +
Preference number: 5 (lower is better)
Translates to: NMIAGRATKSTQPNSINMGCSNA*NTVAPM
Trigger: CATCGGAGCCACCGTGTTCAAAGCATTGGAGCAGCC...CATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CAA 90 bp GATCCAGAACCACACGACAGGCTTATAGAAGTCCAGATATTCAATATCGGATCCTCCAGCTCCGTCGAATaGACACAGGAATGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: DPEPHDRLIEVQIFNIGSSSSVE*TQECWD
Trigger: ATCCCAACATTCCTGTGTCAATTCGACGGAGCTGGA...GGATCCGATATTGAATATCTGGACTTCTATAAGCCTGTCGTGTGGTTCTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CAA 90 bp AGTCAAATAAATACTCAGAGGGGCCACCTCTGCACCTCATTTCTCTGCAGTGCCTATTGCTGCCACTATTaGCTGAATGAGTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: SQINTQRGHLCTSFLCSAYCCHY*LNEFIQ
Trigger: CTGGATGAACTCATTCAGCAAATAGTGGCAGCAATA...GGCACTGCAGAGAAATGAGGTGCAGAGGTGGCCCCTCTGAGTATTTATTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CAA 90 bp GGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCATGATACAGAATATTTaGCCGCCTTCTGTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: GYLMFSITAISSPAQCGVMIQNI*PPSVRG
Trigger: ACCACGCACAGAAGGCGGCAAAATATTCTGTATCAT...GACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ACAGGGTCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGAACGTATCTTCCACTTaGGCAATTCCTTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: TGSSYKESAPDCGFQPVLNVSST*AIPFPN
Trigger: ATTTGGAAAAGGAATTGCCAAAGTGGAAGATACGTT...CAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGACCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp AGTCGCCTCCTGGTTTCTTTGAATTCGGCTGTGACGTTGGCTGTCCACTCAGCAAACGTATCTTCCACTTaGGCAATTCCTTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: SRLLVSLNSAVTLAVHSANVSST*AIPFPN
Trigger: ATTTGGAAAAGGAATTGCCAAAGTGGAAGATACGTT...TGCTGAGTGGACAGCCAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp TCCTCCTACAAGGAGTCAGCTCCTGATTGTGGTTTCCAGCCAGTTCTGCCGAGACAATGTCCATCTAATTaGGCATCTATTTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: SSYKESAPDCGFQPVLPRQCPSN*ASISSS
Trigger: CGAAGATGAAATAGATGCCAAATTAGATGGACATTG...TCTCGGCAGAACTGGCTGGAAACCACAATCAGGAGCTGACTCCTTGTAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS CCA 90 bp ATCCAGCAAGTCAGGTGCCGCCAAGTAGAAATCCCTTTTTGCTCGTaGGTTCATCATTTGGTGATGTTTTCATCAGGAGTCATCATGCTT +
Preference number: 5 (lower is better)
Translates to: IQQVRCRQVEIPFCS*VHHLVMFSSGVIML
Trigger: AAGCATGATGACTCCTGATGAAAACATCACCAAATGATGAACCCACGAGCAAAAAGGGATTTCTACTTGGCGGCACCTGACTTGCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391895.6
ENST00000467031.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGCGCCTCCTGGTTTCTTaGAATTCGGCTGTGACGTTG +
Preference number: 5 (lower is better)
Translates to: ISSSGIITSVILHTVSSKRLLVS*NSAVTL
Trigger: CAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCG...CTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CAA 90 bp TCTCAATCACAGCAATCTCTTCACCAGCACAGTGTGGCGTCAAACCATTCAGATTATTGCTGCCACTATTaGCTGAATGAGTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: SQSQQSLHQHSVASNHSDYCCHY*LNEFIQ
Trigger: CTGGATGAACTCATTCAGCAAATAGTGGCAGCAATA...ATCTGAATGGTTTGACGCCACACTGTGCTGGTGAAGAGATTGCTGTGATTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000474771.5
CDS-3UTR CAA 90 bp AAAATAAATGGCGTCCAGGGCACTCCAGCCTTCTATGTGTTTGAATATGATCGCCAGCCTTCTATGTGTTaGAATATGATCGCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: KINGVQGTPAFYVFEYDRQPSMC*NMIAGR
Trigger: TCTGCCTGCGATCATATTCAAACACATAGAAGGCTG...GCGATCATATTCAAACACATAGAAGGCTGGAGTGCCCTGGACGCCATTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGATTCGCCTCCTGGTTTCTTaGAATTCGGCTGTGACGTTG +
Preference number: 5 (lower is better)
Translates to: MIAGRATKSTQPNSINMIRLLVS*NSAVTL
Trigger: CAACGTCACAGCCGAATTCAAAGAAACCAGGAGGCG...AATCATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR CAA 90 bp TCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGGTATGGTATATGATACAGAATATTTaGCCGCCTTCTGTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: SGIITSVILHTVSSKVWYMIQNI*PPSVRG
Trigger: ACCACGCACAGAAGGCGGCAAAATATTCTGTATCAT...ATACCATACCTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CAA 90 bp GCTTATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAAATGATACAGAATATTTaGCCGCCTTCTGTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: AYRSPDIQYRIHLQRSHQMIQNI*PPSVRG
Trigger: ACCACGCACAGAAGGCGGCAAAATATTCTGTATCAT...TTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CAA 90 bp CACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGGAGGGAGTCATCATGCTTTaGATCTTTAATGCCGTTCTT +
Preference number: 5 (lower is better)
Translates to: HSVASNHSDRYSQSSVREGVIML*IFNAVL
Trigger: AAGAACGGCATTAAAGATCAAAAGCATGATGACTCC...CTCCCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR CAA 90 bp CACAGTGTGGCGTCAAACCATTCAGATAGATACTCTCAGTCTTCAGTAAGGGAGAACGTATCTTCCACTTaGGCAATTCCTTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: HSVASNHSDRYSQSSVRENVSST*AIPFPN
Trigger: ATTTGGAAAAGGAATTGCCAAAGTGGAAGATACGTT...CTCCCTTACTGAAGACTGAGAGTATCTATCTGAATGGTTTGACGCCACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467031.5
ENST00000474771.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ACTGTATATATGTACCACTGGTACCTGAGTCAAATAAATACTCAGAGGGGCCACTTGGGATATGAATGTTaGCTTCTGGATCACAATGGT +
Preference number: 5 (lower is better)
Translates to: TVYMYHWYLSQINTQRGHLGYEC*LLDHNG
Trigger: ACCATTGTGATCCAGAAGCAAACATTCATATCCCAA...GTGGCCCCTCTGAGTATTTATTTGACTCAGGTACCAGTGGTACATATATACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CAA 90 bp ATCTATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAGCCTTCTATGTGTTaGAATATGATCGCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: IYFIFGHHHFSHFTHCFQQPSMC*NMIAGR
Trigger: TCTGCCTGCGATCATATTCAAACACATAGAAGGCTG...CTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CAA 90 bp AGAGATGAATTATGCCTGCAATCTGCATTTTTCCATGTGCAAAGTCACAGTGATGGCATCAGACATTGCTaGTCATTCCACTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: RDELCLQSAFFHVQSHSDGIRHC*SFHSSK
Trigger: CTTTGATGAGTGGAATGACAAGCAATGTCTGATGCC...ATCACTGTGACTTTGCACATGGAAAAATGCAGATTGCAGGCATAATTCATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CAA 90 bp TTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTAAAAAAAGGCATCAGACATaGCTTGTCATTCCACTCATC +
Preference number: 5 (lower is better)
Translates to: FTHCFQQGMVFKWENWGKKRHQT*LVIPLI
Trigger: GATGAGTGGAATGACAAGCAATGTCTGATGCCTTTT...TTTACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CAA 90 bp ATAGAAGTCCAGATATTCAATATCGGATCCACCTGCAACGTAGTCACCAAATCCAACGTATCTTCCACTTaGGCAATTCCTTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: IEVQIFNIGSTCNVVTKSNVSST*AIPFPN
Trigger: ATTTGGAAAAGGAATTGCCAAAGTGGAAGATACGTT...GGATTTGGTGACTACGTTGCAGGTGGATCCGATATTGAATATCTGGACTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CAA 90 bp CAGCCTGGTCATAATTACACTGTATATATGTACCACTGGTACCTGAGTCAAATATCGTGGGTTCATCATTaGGTGATGTTTTCATCAGGA +
Preference number: 5 (lower is better)
Translates to: QPGHNYTVYMYHWYLSQISWVHH*VMFSSG
Trigger: TCCTGATGAAAACATCACCAAATGATGAACCCACGA...TATTTGACTCAGGTACCAGTGGTACATATATACAGTGTAATTATGACCAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS-3UTR CAA 90 bp AATATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGTTGGGATATGAATGTTaGCTTCTGGATCACAATGGT +
Preference number: 5 (lower is better)
Translates to: NMIAGRATKSTQPNSINMLGYEC*LLDHNG
Trigger: ACCATTGTGATCCAGAAGCAAACATTCATATCCCAA...CATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS-3UTR CAA 90 bp GGTTATTTAAAGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTCACCTTGGGATATGAATGTTaGCTTCTGGATCACAATGGT +
Preference number: 5 (lower is better)
Translates to: GYLKRGLFDVLNHSNLFTLGYEC*LLDHNG
Trigger: ACCATTGTGATCCAGAAGCAAACATTCATATCCCAA...GGTGAAGAGATTGCTGTGATTGAGAACATCAAATAGCCCTCTCTTTAAATAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5
CDS-3UTR CAA 90 bp ATTTTACACACTGTTTCCAGCAAGGTATGGTATTCAAATGGGAGAACTGGGGTAAACGTATCTTCCACTTaGGCAATTCCTTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: ILHTVSSKVWYSNGRTGVNVSST*AIPFPN
Trigger: ATTTGGAAAAGGAATTGCCAAAGTGGAAGATACGTT...TACCCCAGTTCTCCCATTTGAATACCATACCTTGCTGGAAACAGTGTGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS-3UTR CAA 90 bp ATTTCATCTTCGGGCATCATCACTTCAGTCATTTTACACACTGTTTCCAGCAAGTTTACAAACACGCCATaGTACTCACTTCTTATTCAG +
Preference number: 5 (lower is better)
Translates to: ISSSGIITSVILHTVSSKFTNTP*YSLLIQ
Trigger: CTGAATAAGAAGTGAGTACAATGGCGTGTTTGTAAA...CTTGCTGGAAACAGTGTGTAAAATGACTGAAGTGATGATGCCCGAAGATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444842.7
CDS-3UTR CAA 90 bp ATGATCGCAGGCAGAGCCACAAAGAGTACACAGCCAAATAGTATAAATATGATTTTTACAAACACGCCATaGTACTCACTTCTTATTCAG +
Preference number: 5 (lower is better)
Translates to: MIAGRATKSTQPNSINMIFTNTP*YSLLIQ
Trigger: CTGAATAAGAAGTGAGTACAATGGCGTGTTTGTAAA...AATCATATTTATACTATTTGGCTGTGTACTCTTTGTGGCTCTGCCTGCGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470177.5
CDS-3UTR CAA 90 bp CAGCCTGGTCATAATTACACTGTATATATGTACCACTGGTACCTGAGTCAAATACAATGTCCATCTAATTaGGCATCTATTTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: QPGHNYTVYMYHWYLSQIQCPSN*ASISSS
Trigger: CGAAGATGAAATAGATGCCAAATTAGATGGACATTG...TATTTGACTCAGGTACCAGTGGTACATATATACAGTGTAATTATGACCAGGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000486921.5
CDS GCA 72 bp CAAGTCAGGTGCCGCCATTCTTATTCAGAGACGGGCTaGGCGCTCCGAGCTGCACGGGCAGGCATTTTCCCC +
Preference number: 6 (lower is better)
Translates to: QVRCRHSYSETG*ALRAARAGIFP
Trigger: GGGGAAAATGCCTGCCCGTGCAGCTCGGAGCGCGCAGCCCGTCTCTGAATAAGAATGGCGGCACCTGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391894.6
ENST00000474771.5
CDS GCA 72 bp CACGCCATTGTACTCACTTCTTATTCAGAGACGGGCTaGGCGCTCCGAGCTGCACGGGCAGGCATTTTCCCC +
Preference number: 6 (lower is better)
Translates to: HAIVLTSYSETG*ALRAARAGIFP
Trigger: GGGGAAAATGCCTGCCCGTGCAGCTCGGAGCGCGCAGCCCGTCTCTGAATAAGAAGTGAGTACAATGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444842.7
ENST00000470177.5
CDS GCA 72 bp GTTCTGAGCGGCAGATTTAGGATCCAGCAAGTCAGGTaGCGCCACTGGAGCCAGGGCGAAGACATCAAGGAG +
Preference number: 6 (lower is better)
Translates to: VLSGRFRIQQVR*RHWSQGEDIKE
Trigger: CTCCTTGATGTCTTCGCCCTGGCTCCAGTGGCGGCACCTGACTTGCTGGATCCTAAATCTGCCGCTCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478774.5
CDS CCA 72 bp CACTCTCCACCCGGGAAGCAAGCACTGTGGGTTTCGTaGAAAACGAGAGCCTCGGTTTGGAGTTCTGAGCGG +
Preference number: 6 (lower is better)
Translates to: HSPPGKQALWVS*KTRASVWSSER
Trigger: CCGCTCAGAACTCCAAACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGCTTGCTTCCCGGGTGGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000478774.5
ENST00000486921.5
CDS CCA 72 bp TGGTCGTGTCACTCTCCACCCGGGAAGCAAGCACTGTaGGTTTCGTGGAAAACGAGAGCCTCGGTTTGGAGT +
Preference number: 6 (lower is better)
Translates to: WSCHSPPGKQAL*VSWKTRASVWS
Trigger: ACTCCAAACCGAGGCTCTCGTTTTCCACGAAACCCACAGTGCTTGCTTCCCGGGTGGAGAGTGACACGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000478774.5
ENST00000486921.5
CDS CCA 72 bp GGCAGATTTAGGATCCAGCAAGTCAGGTGCCGCCACTaGAGCCAGGGCGAAGACATCAAGGAGGGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: GRFRIQQVRCRH*SQGEDIKEGKK
Trigger: TTTCTTCCCCTCCTTGATGTCTTCGCCCTGGCTCCAGTGGCGGCACCTGACTTGCTGGATCCTAAATCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478774.5
CDS CAA 72 bp GGGGGAGAAGCGGCGTGGAGAGGATCTGGCAAGGGTTaGCCTCCAAATCCAGATTATGACCCAACACTTTGG +
Preference number: 6 (lower is better)
Translates to: GGEAAWRGSGKG*PPNPDYDPTLW
Trigger: CCAAAGTGTTGGGTCATAATCTGGATTTGGAGGCAAACCCTTGCCAGATCCTCTCCACGCCGCTTCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457122.1
CDS GCA 72 bp GGGGAGAAGCGGCGTGGAGAGGATCTGGCAAGGGTTTaGCTCCAAATCCAGATTATGACCCAACACTTTGGA +
Preference number: 6 (lower is better)
Translates to: GEKRRGEDLARV*LQIQIMTQHFG
Trigger: TCCAAAGTGTTGGGTCATAATCTGGATTTGGAGGCAAACCCTTGCCAGATCCTCTCCACGCCGCTTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457122.1
CDS CCA 72 bp GGTTTGCCTCCAAATCCAGATTATGACCCAACACTTTaGACGCGAAGCGAAGATGGGAAACGGCCGCTTGCT +
Preference number: 6 (lower is better)
Translates to: GLPPNPDYDPTL*TRSEDGKRPLA
Trigger: AGCAAGCGGCCGTTTCCCATCTTCGCTTCGCGTCCAAAGTGTTGGGTCATAATCTGGATTTGGAGGCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457122.1
CDS TCA 72 bp TTCTGGATCACAATGGTGGTCCTCTGTGAAATCTCATaGGGCTGCTCCAATGCTTTGAACACGGTGGCTCCG +
Preference number: 6 (lower is better)
Translates to: FWITMVVLCEIS*GCSNALNTVAP
Trigger: CGGAGCCACCGTGTTCAAAGCATTGGAGCAGCCTCATGAGATTTCACAGAGGACCACCATTGTGATCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000478774.5
ENST00000486921.5
CDS TCA 72 bp AGGATCTGGCAAGGGTTTGCCTCCAAATCCAGATTATaGCCCAACACTTTGGACGCGAAGCGAAGATGGGAA +
Preference number: 6 (lower is better)
Translates to: RIWQGFASKSRL*PNTLDAKRRWE
Trigger: TTCCCATCTTCGCTTCGCGTCCAAAGTGTTGGGTCATAATCTGGATTTGGAGGCAAACCCTTGCCAGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457122.1
CDS CCA 72 bp GTCAGGTGCCGCCAAGTAGAAATCCCTTTTTGCTCGTaGGTTCATCATTTGGTGATGTTTTCATCAGGAGTC +
Preference number: 6 (lower is better)
Translates to: VRCRQVEIPFCS*VHHLVMFSSGV
Trigger: GACTCCTGATGAAAACATCACCAAATGATGAACCCACGAGCAAAAAGGGATTTCTACTTGGCGGCACCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391895.6
ENST00000467031.5
ENST00000486921.5
CDS CAA 72 bp CCAGCAAGTCAGGTGCCGCCAAGTAGAAATCCCTTTTaGCTCGTGGGTTCATCATTTGGTGATGTTTTCATC +
Preference number: 6 (lower is better)
Translates to: PASQVPPSRNPF*LVGSSFGDVFI
Trigger: GATGAAAACATCACCAAATGATGAACCCACGAGCAAAAAGGGATTTCTACTTGGCGGCACCTGACTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391895.6
ENST00000467031.5
ENST00000486921.5
CDS CAA 90 bp TTGCTGAATGAGTTCATCCAGCTCCGTCGAATTGACACAGGAATGTaGGGATATGAATGTTTGCTTCTGGATCACAATGGTGGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LLNEFIQLRRIDTGM*GYECLLLDHNGGPL
Trigger: CAGAGGACCACCATTGTGATCCAGAAGCAAACATTCATATCCCAACATTCCTGTGTCAATTCGACGGAGCTGGATGAACTCATTCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000474771.5
ENST00000478774.5
CDS CAA 90 bp ATCCTGAATGAGTTCATCCAGCTCCGTCGAATTGACACAGGAATGTaGGGATATGAATGTTTGCTTCTGGATCACAATGGTGGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: ILNEFIQLRRIDTGM*GYECLLLDHNGGPL
Trigger: CAGAGGACCACCATTGTGATCCAGAAGCAAACATTCATATCCCAACATTCCTGTGTCAATTCGACGGAGCTGGATGAACTCATTCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470177.5
ENST00000486921.5
CDS TCA 72 bp GAATGTTTGCTTCTGGATCACAATGGTGGTCCTCTGTaGAATCTCATGAGGCTGCTCCAATGCTTTGAACAC +
Preference number: 6 (lower is better)
Translates to: ECLLLDHNGGPL*NLMRLLQCFEH
Trigger: GTGTTCAAAGCATTGGAGCAGCCTCATGAGATTTCACAGAGGACCACCATTGTGATCCAGAAGCAAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000478774.5
ENST00000486921.5
CDS GCA 72 bp CAGCAAGTCAGGTGCCGCCAAGTAGAAATCCCTTTTTaGTCGTGGGTTCATCATTTGGTGATGTTTTCATCA +
Preference number: 6 (lower is better)
Translates to: QQVRCRQVEIPF*SWVHHLVMFSS
Trigger: TGATGAAAACATCACCAAATGATGAACCCACGAGCAAAAAGGGATTTCTACTTGGCGGCACCTGACTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391895.6
ENST00000467031.5
ENST00000486921.5
CDS CCA 72 bp AGTTCATCCAGCTCCGTCGAATTGACACAGGAATGTTaGGATATGAATGTTTGCTTCTGGATCACAATGGTG +
Preference number: 6 (lower is better)
Translates to: SSSSSVELTQEC*DMNVCFWITMV
Trigger: CACCATTGTGATCCAGAAGCAAACATTCATATCCCAACATTCCTGTGTCAATTCGACGGAGCTGGATGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000478774.5
ENST00000486921.5
CDS CCA 72 bp ACGTATCTTCCACTTTGGCAATTCCTTTTCCAAATATaGTGCCTAGCTGATCTCCAACTCCAGCCAAGAGAA +
Preference number: 6 (lower is better)
Translates to: TYLPLWQFLFQI*CLADLQLQPRE
Trigger: TTCTCTTGGCTGGAGTTGGAGATCAGCTAGGCACCATATTTGGAAAAGGAATTGCCAAAGTGGAAGATACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000486921.5
CDS CAA 72 bp GAGTTCATCCAGCTCCGTCGAATTGACACAGGAATGTaGGGATATGAATGTTTGCTTCTGGATCACAATGGT +
Preference number: 6 (lower is better)
Translates to: EFIQLRRIDTGM*GYECLLLDHNG
Trigger: ACCATTGTGATCCAGAAGCAAACATTCATATCCCAACATTCCTGTGTCAATTCGACGGAGCTGGATGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000478774.5
ENST00000486921.5
CDS GCA 72 bp GTCGAATTGACACAGGAATGTTGGGATATGAATGTTTaGTTCTGGATCACAATGGTGGTCCTCTGTGAAATC +
Preference number: 6 (lower is better)
Translates to: VELTQECWDMNV*FWITMVVLCEI
Trigger: GATTTCACAGAGGACCACCATTGTGATCCAGAAGCAAACATTCATATCCCAACATTCCTGTGTCAATTCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000391894.6
ENST00000391895.6
ENST00000444842.7
ENST00000457122.1
ENST00000467031.5
ENST00000470177.5
ENST00000474771.5
ENST00000478774.5
ENST00000486921.5
CDS CAA 90 bp TGGGTTCATCATTTGGTGATGTTTTCATCAGGAGTCATCATGCTTTaGATCTTTAATGCCGTTCTTCCTCCAAGGTTTCTTGTCCGTAAT +
Preference number: 6 (lower is better)
Translates to: WVHHLVMFSSGVIML*IFNAVLPPRFLVRN
Trigger: ATTACGGACAAGAAACCTTGGAGGAAGAACGGCATTAAAGATCAAAAGCATGATGACTCCTGATGAAAACATCACCAAATGATGAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486921.5
CDS CAA 72 bp CATTTGGTGATGTTTTCATCAGGAGTCATCATGCTTTaGATCTTTAATGCCGTTCTTCCTCCAAGGTTTCTT +
Preference number: 6 (lower is better)
Translates to: HLVMFSSGVIML*IFNAVLPPRFL
Trigger: AAGAAACCTTGGAGGAAGAACGGCATTAAAGATCAAAAGCATGATGACTCCTGATGAAAACATCACCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467031.5
ENST00000486921.5