Pregenerated sensors for KCNK18 (Homo sapiens)
Ensembl gene IDs: ENSG00000186795Ensembl transcript IDs: ENST00000334549.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAAACTCTCCATCATCTGCTGCCACCAGGACCTGGCCGTCCTCAATaGCAGAGAAGACCACAGCACCCACCAGGGCGTAGGTCACCAGAA | + |
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Preference number: 5 (lower is better) Translates to: QTLHHLLPPGPGRPQ*QRRPQHPPGRRSPE Trigger: TTCTGGTGACCTACGCCCTGGTGGGTGCTGTGGTCTTCTCTGCCATTGAGGACGGCCAGGTCCTGGTGGCAGCAGATGATGGAGAGTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS CCA 90 bp | TCCAAGAACTTCTCAAACTCTCCATCATCTGCTGCCACCAGGACCTaGCCGTCCTCAATGGCAGAGAAGACCACAGCACCCACCAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: SKNFSNSPSSAATRT*PSSMAEKTTAPTRA Trigger: CGCCCTGGTGGGTGCTGTGGTCTTCTCTGCCATTGAGGACGGCCAGGTCCTGGTGGCAGCAGATGATGGAGAGTTTGAGAAGTTCTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 90 bp | TCTGCAGAGCTCCTCCAAGAACTTCTCAAACTCTCCATCATCTGCTaGCACCAGGACCTGGCCGTCCTCAATGGCAGAGAAGACCACAGC | + |
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Preference number: 5 (lower is better) Translates to: SAELLQELLKLSIIC*HQDLAVLNGREDHS Trigger: GCTGTGGTCTTCTCTGCCATTGAGGACGGCCAGGTCCTGGTGGCAGCAGATGATGGAGAGTTTGAGAAGTTCTTGGAGGAGCTCTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 90 bp | GATTCTGCAGAGCTCCTCCAAGAACTTCTCAAACTCTCCATCATCTaGTGCCACCAGGACCTGGCCGTCCTCAATGGCAGAGAAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: DSAELLQELLKLSII*CHQDLAVLNGREDH Trigger: GTGGTCTTCTCTGCCATTGAGGACGGCCAGGTCCTGGTGGCAGCAGATGATGGAGAGTTTGAGAAGTTCTTGGAGGAGCTCTGCAGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS TCA 90 bp | AAGAGCGAGCTCAGGAAGGACCAGTGTGTGGTCCTGTTAAACCACTaGGGCTTCACCTTCTGCAGATGCCCCTGGAGATCCTGTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: KSELRKDQCVVLLNH*GFTFCRCPWRSCFL Trigger: CAGAAAACAGGATCTCCAGGGGCATCTGCAGAAGGTGAAGCCTCAGTGGTTTAACAGGACCACACACTGGTCCTTCCTGAGCTCGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 90 bp | GTGTGTTCTGTTTCTCTAGCGCATGAGATCTCTCAAACAGCTCCATaGTGCAGCTTGGGCGTGAAGGACATGTGCCAAGTTTGGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: VCSVSLAHEISQTAP*CSLGVKDMCQVWGL Trigger: CAGGCCCCAAACTTGGCACATGTCCTTCACGCCCAAGCTGCAGCATGGAGCTGTTTGAGAGATCTCATGCGCTAGAGAAACAGAACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS TCA 90 bp | CTCCACCTGCTGTCCAACTTCATCCAGGTTGCTGATGATGGAGTATaGGAGTCTTCCCAACACCAGTTCGGGACACGAGTTACTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LHLLSNFIQVADDGV*ESSQHQFGTRVTPL Trigger: GAGAGGAGTAACTCGTGTCCCGAACTGGTGTTGGGAAGACTCTCATACTCCATCATCAGCAACCTGGATGAAGTTGGACAGCAGGTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 90 bp | TGTTCTGTTTCTCTAGCGCATGAGATCTCTCAAACAGCTCCATGCTaGAGCTTGGGCGTGAAGGACATGTGCCAAGTTTGGGGCCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: CSVSLAHEISQTAPC*SLGVKDMCQVWGLE Trigger: TTCCAGGCCCCAAACTTGGCACATGTCCTTCACGCCCAAGCTGCAGCATGGAGCTGTTTGAGAGATCTCATGCGCTAGAGAAACAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 90 bp | ACAATAAGGGCAATGATGGGGAGGGGGATGTCCAACCTCTCCACCTaGTGTCCAACTTCATCCAGGTTGCTGATGATGGAGTATGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: TIRAMMGRGMSNLST*CPTSSRLLMMEYES Trigger: ACTCTCATACTCCATCATCAGCAACCTGGATGAAGTTGGACAGCAGGTGGAGAGGTTGGACATCCCCCTCCCCATCATTGCCCTTATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 90 bp | CCTGTTTTCTGTCTTCCACCACTGTTTCACTGCAGTTCAAGATTCTaGAGAGCTCCTCCAAGAACTTCTCAAACTCTCCATCATCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PVFCLPPLFHCSSRF*RAPPRTSQTLHHLL Trigger: CAGCAGATGATGGAGAGTTTGAGAAGTTCTTGGAGGAGCTCTGCAGAATCTTGAACTGCAGTGAAACAGTGGTGGAAGACAGAAAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 90 bp | GCAAAGAATAGCATAACATTTTTGTATATGTCAATCAGCCTGTTTTaGACCAACTTGAAAGCAATGAACACAATCTCCATTCCAACGATG | + |
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Preference number: 5 (lower is better) Translates to: AKNSITFLYMSISLF*TNLKAMNTISIPTM Trigger: CATCGTTGGAATGGAGATTGTGTTCATTGCTTTCAAGTTGGTGCAAAACAGGCTGATTGACATATACAAAAATGTTATGCTATTCTTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS CCA 72 bp | CATCATCTGCTGCCACCAGGACCTGGCCGTCCTCAATaGCAGAGAAGACCACAGCACCCACCAGGGCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: HHLLPPGPGRPQ*QRRPQHPPGRR Trigger: CCTACGCCCTGGTGGGTGCTGTGGTCTTCTCTGCCATTGAGGACGGCCAGGTCCTGGTGGCAGCAGATGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS CAA 72 bp | GCGCATGAGATCTCTCAAACAGCTCCATGCTGCAGCTaGGGCGTGAAGGACATGTGCCAAGTTTGGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: AHEISQTAPCCS*GVKDMCQVWGL Trigger: CAGGCCCCAAACTTGGCACATGTCCTTCACGCCCAAGCTGCAGCATGGAGCTGTTTGAGAGATCTCATGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS TCA 72 bp | CTCAGGAAGGACCAGTGTGTGGTCCTGTTAAACCACTaGGGCTTCACCTTCTGCAGATGCCCCTGGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: LRKDQCVVLLNH*GFTFCRCPWRS Trigger: GGATCTCCAGGGGCATCTGCAGAAGGTGAAGCCTCAGTGGTTTAACAGGACCACACACTGGTCCTTCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS TCA 72 bp | AGATCTCTCAAACAGCTCCATGCTGCAGCTTGGGCGTaGAGGACATGTGCCAAGTTTGGGGCCTGGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RSLKQLHAAAWA*RTCAKFGAWKL Trigger: GAGCTTCCAGGCCCCAAACTTGGCACATGTCCTTCACGCCCAAGCTGCAGCATGGAGCTGTTTGAGAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 72 bp | GAGCTCCTCCAAGAACTTCTCAAACTCTCCATCATCTaGTGCCACCAGGACCTGGCCGTCCTCAATGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ELLQELLKLSII*CHQDLAVLNGR Trigger: TCTGCCATTGAGGACGGCCAGGTCCTGGTGGCAGCAGATGATGGAGAGTTTGAGAAGTTCTTGGAGGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 72 bp | CTCCTCCAAGAACTTCTCAAACTCTCCATCATCTGCTaGCACCAGGACCTGGCCGTCCTCAATGGCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLQELLKLSIIC*HQDLAVLNGRE Trigger: TTCTCTGCCATTGAGGACGGCCAGGTCCTGGTGGCAGCAGATGATGGAGAGTTTGAGAAGTTCTTGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS CCA 72 bp | CCAACACCAGTTCGGGACACGAGTTACTCCTCTCCATaGCTTGTGGGGGCAGTTGCAGTGTGTTCTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PTPVRDTSYSSP*LVGAVAVCSVS Trigger: AGAAACAGAACACACTGCAACTGCCCCCACAAGCCATGGAGAGGAGTAACTCGTGTCCCGAACTGGTGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS CAA 90 bp | GTTTCTCTAGCGCATGAGATCTCTCAAACAGCTCCATGCTGCAGCTaGGGCGTGAAGGACATGTGCCAAGTTTGGGGCCTGGAAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: VSLAHEISQTAPCCS*GVKDMCQVWGLEAL Trigger: AAGAGCTTCCAGGCCCCAAACTTGGCACATGTCCTTCACGCCCAAGCTGCAGCATGGAGCTGTTTGAGAGATCTCATGCGCTAGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 72 bp | TCTCTAGCGCATGAGATCTCTCAAACAGCTCCATGCTaGAGCTTGGGCGTGAAGGACATGTGCCAAGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SLAHEISQTAPC*SLGVKDMCQVW Trigger: CCAAACTTGGCACATGTCCTTCACGCCCAAGCTGCAGCATGGAGCTGTTTGAGAGATCTCATGCGCTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 72 bp | GTTTCTCTAGCGCATGAGATCTCTCAAACAGCTCCATaGTGCAGCTTGGGCGTGAAGGACATGTGCCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: VSLAHEISQTAP*CSLGVKDMCQV Trigger: AACTTGGCACATGTCCTTCACGCCCAAGCTGCAGCATGGAGCTGTTTGAGAGATCTCATGCGCTAGAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS TCA 72 bp | CTGTCCAACTTCATCCAGGTTGCTGATGATGGAGTATaGGAGTCTTCCCAACACCAGTTCGGGACACGAGTT | + |
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Preference number: 6 (lower is better) Translates to: LSNFIQVADDGV*ESSQHQFGTRV Trigger: AACTCGTGTCCCGAACTGGTGTTGGGAAGACTCTCATACTCCATCATCAGCAACCTGGATGAAGTTGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 72 bp | TGTCTTCCACCACTGTTTCACTGCAGTTCAAGATTCTaGAGAGCTCCTCCAAGAACTTCTCAAACTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: CLPPLFHCSSRF*RAPPRTSQTLH Trigger: ATGGAGAGTTTGAGAAGTTCTTGGAGGAGCTCTGCAGAATCTTGAACTGCAGTGAAACAGTGGTGGAAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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| CDS GCA 72 bp | AGCATAACATTTTTGTATATGTCAATCAGCCTGTTTTaGACCAACTTGAAAGCAATGAACACAATCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: SITFLYMSISLF*TNLKAMNTISI Trigger: AATGGAGATTGTGTTCATTGCTTTCAAGTTGGTGCAAAACAGGCTGATTGACATATACAAAAATGTTATGCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334549.1 |
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