RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNK12 (Homo sapiens)

Ensembl gene IDs: ENSG00000184261

Ensembl transcript IDs: ENST00000327876.5, ENST00000493527.1

Found 871 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCCAGAATGCCTGGTGGACAGGGAGCCCTCAGCAGGCCGTACTaGAGCGCCCTGCCCCCGTCAGCCTCCAGGAGCCTGGAGTCCAGG +
Preference number: 1 (lower is better)
Translates to: QPRMPGGQGALSRPY*SALPPSASRSLESR
Trigger: CCTGGACTCCAGGCTCCTGGAGGCTGACGGGGGCAGGGCGCTGCAGTACGGCCTGCTGAGGGCTCCCTGTCCACCAGGCATTCTGGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp TGGCTGCCTCTCTTTGGTGTGCCCATGGCAGCCCAGAATGCCTGGTaGACAGGGAGCCCTCAGCAGGCCGTACTGCAGCGCCCTGCCCCC +
Preference number: 1 (lower is better)
Translates to: WLPLFGVPMAAQNAW*TGSPQQAVLQRPAP
Trigger: GGGGGCAGGGCGCTGCAGTACGGCCTGCTGAGGGCTCCCTGTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GATCCGAGCCTGGAGATCAGCCAGCTAAAAGCCCAGCAGGGCTCCTaGAGCCTCACCGCTCCCCTCCTCACAGGTGCCCTGGACCGCCCA +
Preference number: 1 (lower is better)
Translates to: DPSLEISQLKAQQGS*SLTAPLLTGALDRP
Trigger: TGGGCGGTCCAGGGCACCTGTGAGGAGGGGAGCGGTGAGGCTGCAGGAGCCCTGCTGGGCTTTTAGCTGGCTGATCTCCAGGCTCGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp GCAGGCCGTACTGCAGCGCCCTGCCCCCGTCAGCCTCCAGGAGCCTaGAGTCCAGGGACATCAAGGGCGGTCCTGTCTTTCTCACCCTTG +
Preference number: 1 (lower is better)
Translates to: AGRTAAPCPRQPPGA*SPGTSRAVLSFSPL
Trigger: CAAGGGTGAGAAAGACAGGACCGCCCTTGATGTCCCTGGACTCCAGGCTCCTGGAGGCTGACGGGGGCAGGGCGCTGCAGTACGGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CTCTGCCTACCCAGGCTGGGTGGCTGCCTCTCTTTGGTGTGCCCATaGCAGCCCAGAATGCCTGGTGGACAGGGAGCCCTCAGCAGGCCG +
Preference number: 1 (lower is better)
Translates to: LCLPRLGGCLSLVCP*QPRMPGGQGALSRP
Trigger: CGGCCTGCTGAGGGCTCCCTGTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp AGCCTTCTCTGCCTACCCAGGCTGGGTGGCTGCCTCTCTTTGGTGTaGCCATGGCAGCCCAGAATGCCTGGTGGACAGGGAGCCCTCAGC +
Preference number: 1 (lower is better)
Translates to: SLLCLPRLGGCLSLV*PWQPRMPGGQGALS
Trigger: GCTGAGGGCTCCCTGTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGAGAAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CTGAGAGCCTTCTCTGCCTACCCAGGCTGGGTGGCTGCCTCTCTTTaGTGTGCCCATGGCAGCCCAGAATGCCTGGTGGACAGGGAGCCC +
Preference number: 1 (lower is better)
Translates to: LRAFSAYPGWVAASL*CAHGSPECLVDREP
Trigger: GGGCTCCCTGTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGAGAAGGCTCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp CCAGGTCCTGTCAGAGGGCCCTGCCCTAGAGAACACGTGCGCCCCTaGGTGGGCAATCCCTTCACTGTGACCGCAACCATGGGTTGGATG +
Preference number: 1 (lower is better)
Translates to: PGPVRGPCPREHVRP*VGNPFTVTATMGWM
Trigger: CATCCAACCCATGGTTGCGGTCACAGTGAAGGGATTGCCCACGCAGGGGCGCACGTGTTCTCTAGGGCAGGGCCCTCTGACAGGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp TCACATAGCTGGGGCACAGCTGGAGACCCCAACAGAGAGGAGAGCTaGTGGGTGACGAGAAATCAGGCCTCTCCGCCACGGCAGCCTAGC +
Preference number: 1 (lower is better)
Translates to: SHSWGTAGDPNREES*WVTRNQASPPRQPS
Trigger: GCTAGGCTGCCGTGGCGGAGAGGCCTGATTTCTCGTCACCCATCAGCTCTCCTCTCTGTTGGGGTCTCCAGCTGTGCCCCAGCTATGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp ACAGCTGCTTCTGAGAGCCTTCTCTGCCTACCCAGGCTGGGTGGCTaGCTCTCTTTGGTGTGCCCATGGCAGCCCAGAATGCCTGGTGGA +
Preference number: 1 (lower is better)
Translates to: TAASESLLCLPRLGG*LSLVCPWQPRMPGG
Trigger: TCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGAGAAGGCTCTCAGAAGCAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp AAGATCGAACCACAGGGCCCGTCGCTCCTATGGTCTCTGCCTGACTaGGCTGCCGTCTGCCTCAGTTCCCCAGAAGCTTCTCCTTTGGCC +
Preference number: 1 (lower is better)
Translates to: KIEPQGPSLLWSLPD*AAVCLSSPEASPLA
Trigger: GGCCAAAGGAGAAGCTTCTGGGGAACTGAGGCAGACGGCAGCCCAGTCAGGCAGAGACCATAGGAGCGACGGGCCCTGTGGTTCGATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CAGCATGGACAGCTGCTTCTGAGAGCCTTCTCTGCCTACCCAGGCTaGGTGGCTGCCTCTCTTTGGTGTGCCCATGGCAGCCCAGAATGC +
Preference number: 1 (lower is better)
Translates to: QHGQLLLRAFSAYPG*VAASLWCAHGSPEC
Trigger: GCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGAGAAGGCTCTCAGAAGCAGCTGTCCATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CCTCCTCCTGGGTTCCCAGGCTCAGTGGTGGCACCACTGTCTACCTaGCTGCTTAGCCTGAGACCTGGCTCCGTCCCAATTCCTCTCTCT +
Preference number: 1 (lower is better)
Translates to: PPPGFPGSVVAPLST*LLSLRPGSVPIPLS
Trigger: AGAGAGAGGAATTGGGACGGAGCCAGGTCTCAGGCTAAGCAGCCAGGTAGACAGTGGTGCCACCACTGAGCCTGGGAACCCAGGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CATGGAAAGGATGGCAGAGCGGGAAGGAGGAGCCAGCCTTACCGATaGCATCACTGTCACTGCGCTAGCCCCAGACCACCTGCTCCAGAG +
Preference number: 1 (lower is better)
Translates to: HGKDGRAGRRSQPYR*HHCHCASPRPPAPE
Trigger: CTCTGGAGCAGGTGGTCTGGGGCTAGCGCAGTGACAGTGATGCCATCGGTAAGGCTGGCTCCTCCTTCCCGCTCTGCCATCCTTTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp GATGGGTGCACGGTGAACAGCAGGTGGGGGTCTTTCCATAGGGGATaGGGAAGACAAGGCCACTTGGAGGCAGAGGAGACCACAGTGGGG +
Preference number: 1 (lower is better)
Translates to: DGCTVNSRWGSFHRG*GRQGHLEAEETTVG
Trigger: CCCCACTGTGGTCTCCTCTGCCTCCAAGTGGCCTTGTCTTCCTCATCCCCTATGGAAAGACCCCCACCTGCTGTTCACCGTGCACCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp TGCTCCTCTGCCTGGGCCACTCTTCCTGCTCCTTGTCAGCAGGCTTaGTGCTCTCAGGCTCAGCATGGACAGCTGCTTCTGAGAGCCTTC +
Preference number: 1 (lower is better)
Translates to: CSSAWATLPAPCQQA*CSQAQHGQLLLRAF
Trigger: GAAGGCTCTCAGAAGCAGCTGTCCATGCTGAGCCTGAGAGCAGCAAGCCTGCTGACAAGGAGCAGGAAGAGTGGCCCAGGCAGAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp ATGGATGTGAGCCTTGGAGGGGTAGCTACCATCTGGCACCTGGGGTaGCAAGCCAACATGGAAAGGATGGCAGAGCGGGAAGGAGGAGCC +
Preference number: 1 (lower is better)
Translates to: MDVSLGGVATIWHLG*QANMERMAEREGGA
Trigger: GGCTCCTCCTTCCCGCTCTGCCATCCTTTCCATGTTGGCTTGCCACCCCAGGTGCCAGATGGTAGCTACCCCTCCAAGGCTCACATCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp ATGAAGCCTGGGTATCTGGCCTTCCTCCAGGTCAGGGACCCCCTATaGTGCAGAAGGCAAGTCTGGGAGAATCTGTCCCTCAGCCCGAGA +
Preference number: 1 (lower is better)
Translates to: MKPGYLAFLQVRDPL*CRRQVWENLSLSPR
Trigger: TCTCGGGCTGAGGGACAGATTCTCCCAGACTTGCCTTCTGCAGCATAGGGGGTCCCTGACCTGGAGGAAGGCCAGATACCCAGGCTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp TCCTCTGCCTGGGCCACTCTTCCTGCTCCTTGTCAGCAGGCTTGCTaGTCTCAGGCTCAGCATGGACAGCTGCTTCTGAGAGCCTTCTCT +
Preference number: 1 (lower is better)
Translates to: SSAWATLPAPCQQAC*SQAQHGQLLLRAFS
Trigger: AGAGAAGGCTCTCAGAAGCAGCTGTCCATGCTGAGCCTGAGAGCAGCAAGCCTGCTGACAAGGAGCAGGAAGAGTGGCCCAGGCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp AGGCCCTTCGCTATCTGGCCCCCTCATTACCTCCCTTGCTCTGCATaGTCCAGTCCTGCAGAACTACACACAGTTCCCCCAACAAGGCCC +
Preference number: 1 (lower is better)
Translates to: RPFAIWPPHYLPCSA*SSPAELHTVPPTRP
Trigger: GGGCCTTGTTGGGGGAACTGTGTGTAGTTCTGCAGGACTGGAGCATGCAGAGCAAGGGAGGTAATGAGGGGGCCAGATAGCGAAGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CTCAGTCATCCCTCACCCCAGAGTCCACAGGAAGAGGGGGTCTGCTaGGAGGCCTGTCTGAAGGACGGAGGATCCTGGGTCAATTTAGCA +
Preference number: 1 (lower is better)
Translates to: LSHPSPQSPQEEGVC*EACLKDGGSWVNLA
Trigger: TGCTAAATTGACCCAGGATCCTCCGTCCTTCAGACAGGCCTCCCAGCAGACCCCCTCTTCCTGTGGACTCTGGGGTGAGGGATGACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp TCTTCCTGCTCCTTGTCAGCAGGCTTGCTGCTCTCAGGCTCAGCATaGACAGCTGCTTCTGAGAGCCTTCTCTGCCTACCCAGGCTGGGT +
Preference number: 1 (lower is better)
Translates to: SSCSLSAGLLLSGSA*TAASESLLCLPRLG
Trigger: ACCCAGCCTGGGTAGGCAGAGAAGGCTCTCAGAAGCAGCTGTCCATGCTGAGCCTGAGAGCAGCAAGCCTGCTGACAAGGAGCAGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp ACATTTGCAAGATGGCTTCTTTTGGGTTCCTGGTGCTGCAGGCCCTaGTTCCCAAGGACGCAGCTGGCAGAGGTGCCTCCTTCAGAGGAG +
Preference number: 1 (lower is better)
Translates to: TFARWLLLGSWCCRP*FPRTQLAEVPPSEE
Trigger: CTCCTCTGAAGGAGGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGCAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp TCTCCAGGCCTGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTaGCCACCTGGCTTTAGCAAGCTAGGACACCCAGGGTGGCTTCTT +
Preference number: 1 (lower is better)
Translates to: SPGLEALLHSEDTKA*PPGFSKLGHPGWLL
Trigger: AAGAAGCCACCCTGGGTGTCCTAGCTTGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCAGGCCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp AATACCCTGACATTTGCAAGATGGCTTCTTTTGGGTTCCTGGTGCTaGAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCTCCT +
Preference number: 1 (lower is better)
Translates to: NTLTFARWLLLGSWC*RPWFPRTQLAEVPP
Trigger: AGGAGGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGCAAATGTCAGGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp CCAAATACCCTGACATTTGCAAGATGGCTTCTTTTGGGTTCCTGGTaGTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCT +
Preference number: 1 (lower is better)
Translates to: PNTLTFARWLLLGSW*CRPWFPRTQLAEVP
Trigger: AGGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGCAAATGTCAGGGTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CTGGTTCCTCCCATGGAGACCACGATTCTGTGTAGTCCTGCACGCTaGGCGGGGGATTGCCTGGAGGTTTCTTTAGACCTGTCTAGCTCA +
Preference number: 1 (lower is better)
Translates to: LVPPMETTILCSPAR*AGDCLEVSLDLSSS
Trigger: TGAGCTAGACAGGTCTAAAGAAACCTCCAGGCAATCCCCCGCCCAGCGTGCAGGACTACACAGAATCGTGGTCTCCATGGGAGGAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CACATGTGCCACTGGATCCTGAGCTGCCATTGTACCTTGGAGGACTaGCGTTTCTCTGGGAAGTTGGGAGGTGGGAAGAGGAAGGGTCTC +
Preference number: 1 (lower is better)
Translates to: HMCHWILSCHCTLED*RFSGKLGGGKRKGL
Trigger: GAGACCCTTCCTCTTCCCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTCAGGATCCAGTGGCACATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CTTGGCTCAGCCTGGCCAAGCTGCCCAGGAGGTCCCTTGGTGCCCTaGGCTCTGTTTCACTGTTGTTTTGTAGAGCAACTTCCCAGTGAT +
Preference number: 1 (lower is better)
Translates to: LGSAWPSCPGGPLVP*ALFHCCFVEQLPSD
Trigger: ATCACTGGGAAGTTGCTCTACAAAACAACAGTGAAACAGAGCCCAGGGCACCAAGGGACCTCCTGGGCAGCTTGGCCAGGCTGAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CTGATGTCAGCTGGCTGCCAACACGTCAGTTGTATCAGCATTAGCTaGCTGGAGGTGGCCTGCTGTGTGCAGATGGTACCTGGTGCAGGA +
Preference number: 1 (lower is better)
Translates to: LMSAGCQHVSCISIS*LEVACCVQMVPGAG
Trigger: TCCTGCACCAGGTACCATCTGCACACAGCAGGCCACCTCCAGCCAGCTAATGCTGATACAACTGACGTGTTGGCAGCCAGCTGACATCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp TCCCCTCCTCACAGGTGCCCTGGACCGCCCACCATTAGAAGTAGCTaGCCTGTGCTCTGTGCTAAATGGACTAACTCTGAGCTGAGAAAG +
Preference number: 1 (lower is better)
Translates to: SPPHRCPGPPTIRSS*PVLCAKWTNSELRK
Trigger: CTTTCTCAGCTCAGAGTTAGTCCATTTAGCACAGAGCACAGGGCAGCTACTTCTAATGGTGGGCGGTCCAGGGCACCTGTGAGGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GTGGATGAGCTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTaGCGATCCGAGCCTGGAGATCAGCCAGCTAAAAGCCCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: VDELVKERTVGGFKI*RSEPGDQPAKSPAG
Trigger: CCCTGCTGGGCTTTTAGCTGGCTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAGCTCATCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp TATCTGGCCCCCTCATTACCTCCCTTGCTCTGCATGCTCCAGTCCTaGAGAACTACACACAGTTCCCCCAACAAGGCCCTGCTCTGTTCT +
Preference number: 1 (lower is better)
Translates to: YLAPSLPPLLCMLQS*RTTHSSPNKALLCS
Trigger: AGAACAGAGCAGGGCCTTGTTGGGGGAACTGTGTGTAGTTCTGCAGGACTGGAGCATGCAGAGCAAGGGAGGTAATGAGGGGGCCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp TACAAGGCCCTTCGCTATCTGGCCCCCTCATTACCTCCCTTGCTCTaGATGCTCCAGTCCTGCAGAACTACACACAGTTCCCCCAACAAG +
Preference number: 1 (lower is better)
Translates to: YKALRYLAPSLPPLL*MLQSCRTTHSSPNK
Trigger: CTTGTTGGGGGAACTGTGTGTAGTTCTGCAGGACTGGAGCATGCAGAGCAAGGGAGGTAATGAGGGGGCCAGATAGCGAAGGGCCTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp ACGTCAGTTGTATCAGCATTAGCTGGCTGGAGGTGGCCTGCTGTGTaGAGATGGTACCTGGTGCAGGATTGTGGTGTCCAGGTGTCTCTC +
Preference number: 1 (lower is better)
Translates to: TSVVSALAGWRWPAV*RWYLVQDCGVQVSL
Trigger: GAGAGACACCTGGACACCACAATCCTGCACCAGGTACCATCTGCACACAGCAGGCCACCTCCAGCCAGCTAATGCTGATACAACTGACGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp TGCCAACACGTCAGTTGTATCAGCATTAGCTGGCTGGAGGTGGCCTaGTGTGTGCAGATGGTACCTGGTGCAGGATTGTGGTGTCCAGGT +
Preference number: 1 (lower is better)
Translates to: CQHVSCISISWLEVA*CVQMVPGAGLWCPG
Trigger: ACCTGGACACCACAATCCTGCACCAGGTACCATCTGCACACAGCAGGCCACCTCCAGCCAGCTAATGCTGATACAACTGACGTGTTGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp GAGTGTTCGTTTACACCCCCAGACCACTATCCTTTCAATGAAGCCTaGGTATCTGGCCTTCCTCCAGGTCAGGGACCCCCTATGCTGCAG +
Preference number: 1 (lower is better)
Translates to: ECSFTPPDHYPFNEA*VSGLPPGQGPPMLQ
Trigger: CTGCAGCATAGGGGGTCCCTGACCTGGAGGAAGGCCAGATACCCAGGCTTCATTGAAAGGATAGTGGTCTGGGGGTGTAAACGAACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp GTGTGTGTTCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATaGCTCCAGCTGGAGGCGGTGAGGCGGTGCTTTTCTAAGACTTCC +
Preference number: 1 (lower is better)
Translates to: VCVPRTFARERDFTA*LQLEAVRRCFSKTS
Trigger: GGAAGTCTTAGAAAAGCACCGCCTCACCGCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGAACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp GAAGAGGGGGTCTGCTGGGAGGCCTGTCTGAAGGACGGAGGATCCTaGGTCAATTTAGCAGCTATTTTCCAGGGTTTGGCTTGGGTTTGG +
Preference number: 1 (lower is better)
Translates to: EEGVCWEACLKDGGS*VNLAAIFQGLAWVW
Trigger: CCAAACCCAAGCCAAACCCTGGAAAATAGCTGCTAAATTGACCCAGGATCCTCCGTCCTTCAGACAGGCCTCCCAGCAGACCCCCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp GTTGTATCAGCATTAGCTGGCTGGAGGTGGCCTGCTGTGTGCAGATaGTACCTGGTGCAGGATTGTGGTGTCCAGGTGTCTCTCCTTAGC +
Preference number: 1 (lower is better)
Translates to: VVSALAGWRWPAVCR*YLVQDCGVQVSLLS
Trigger: GCTAAGGAGAGACACCTGGACACCACAATCCTGCACCAGGTACCATCTGCACACAGCAGGCCACCTCCAGCCAGCTAATGCTGATACAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp TGTCAGCTGGCTGCCAACACGTCAGTTGTATCAGCATTAGCTGGCTaGAGGTGGCCTGCTGTGTGCAGATGGTACCTGGTGCAGGATTGT +
Preference number: 1 (lower is better)
Translates to: CQLAANTSVVSALAG*RWPAVCRWYLVQDC
Trigger: ACAATCCTGCACCAGGTACCATCTGCACACAGCAGGCCACCTCCAGCCAGCTAATGCTGATACAACTGACGTGTTGGCAGCCAGCTGACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp GCAGAGAGAGTGTTCGTTTACACCCCCAGACCACTATCCTTTCAATaGAGCCTGGGTATCTGGCCTTCCTCCAGGTCAGGGACCCCCTAT +
Preference number: 1 (lower is better)
Translates to: AERVFVYTPRPLSFQ*SLGIWPSSRSGTPY
Trigger: ATAGGGGGTCCCTGACCTGGAGGAAGGCCAGATACCCAGGCTTCATTGAAAGGATAGTGGTCTGGGGGTGTAAACGAACACTCTCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GCTGGAAGAACTTCATCCCCAGCTGACACTGTGGGAAGGACCCCATaGAGAAGCAATAGGGCAGCCTGGTCCCATATCCTCATGAAATGC +
Preference number: 1 (lower is better)
Translates to: AGRTSSPADTVGRTP*RSNRAAWSHILMKC
Trigger: GCATTTCATGAGGATATGGGACCAGGCTGCCCTATTGCTTCTGCATGGGGTCCTTCCCACAGTGTCAGCTGGGGATGAAGTTCTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GCAGGAACCTGGCCAGTCCTTAGTGGAGGACATTTCTTTCCATCCTaGATCCAGATGGCTGGTCCTGCTCCTCCCAGTCCATGGAGAAAA +
Preference number: 1 (lower is better)
Translates to: AGTWPVLSGGHFFPS*IQMAGPAPPSPWRK
Trigger: TTTTCTCCATGGACTGGGAGGAGCAGGACCAGCCATCTGGATGCAGGATGGAAAGAAATGTCCTCCACTAAGGACTGGCCAGGTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp CTCTCCTTAGCACATAAGACCCTGTCCGAGGACTGTGGCATGACGTaGTGGAGTCACGATTCTGTCACCCAGTCAGGTCATCAGTGTCAG +
Preference number: 1 (lower is better)
Translates to: LSLAHKTLSEDCGMT*WSHDSVTQSGHQCQ
Trigger: CTGACACTGATGACCTGACTGGGTGACAGAATCGTGACTCCAGCACGTCATGCCACAGTCCTCGGACAGGGTCTTATGTGCTAAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp AGCCCCAGCGCCTCTTCTGGACTCAGATGCCCTAGGCTGGCTGTCTaGCTGTGCTTTCCAGACAGTGTGTATGTGGAATTGTGCTTTTTG +
Preference number: 1 (lower is better)
Translates to: SPSASSGLRCPRLAV*LCFPDSVYVELCFL
Trigger: CAAAAAGCACAATTCCACATACACACTGTCTGGAAAGCACAGCCAGACAGCCAGCCTAGGGCATCTGAGTCCAGAAGAGGCGCTGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CGAGAAATCAGGCCTCTCCGCCACGGCAGCCTAGCTAATGGGTCTTaGCTGGAAGCTAACAGGAAGGCCTCTTTCCAGAAACACTGTAAG +
Preference number: 1 (lower is better)
Translates to: REIRPLRHGSLANGS*LEANRKASFQKHCK
Trigger: CTTACAGTGTTTCTGGAAAGAGGCCTTCCTGTTAGCTTCCAGCCAAGACCCATTAGCTAGGCTGCCGTGGCGGAGAGGCCTGATTTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp TTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCGGTaGGGCGGTGCTTTTCTAAGACTTCCTATCAGAAGCTGTGCATAC +
Preference number: 1 (lower is better)
Translates to: LPGREISQHGSSWRR*GGAFLRLPIRSCAY
Trigger: GTATGCACAGCTTCTGATAGGAAGTCTTAGAAAAGCACCGCCTCACCGCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp TGCAAATGCCCAGGGCTGTCTGGCATTTTCCACAAAATGAGAGCCTaGGATTGCCTAAGCCTTCTGATGCCTTCTCCAGGCCTGGAGGCA +
Preference number: 1 (lower is better)
Translates to: CKCPGLSGIFHKMRA*DCLSLLMPSPGLEA
Trigger: TGCCTCCAGGCCTGGAGAAGGCATCAGAAGGCTTAGGCAATCTCAGGCTCTCATTTTGTGGAAAATGCCAGACAGCCCTGGGCATTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp ATTACAGAGAGATGCCCACAGTGCATGACGTTACCCGCACAGGTGTaGCATCACAGGGTAACCAAATGCTTTTGCCCTGGGGGTGGGAGA +
Preference number: 1 (lower is better)
Translates to: ITERCPQCMTLPAQV*HHRVTKCFCPGGGR
Trigger: TCTCCCACCCCCAGGGCAAAAGCATTTGGTTACCCTGTGATGTCACACCTGTGCGGGTAACGTCATGCACTGTGGGCATCTCTCTGTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GACCCCAAACACATCATGGCCTCTGGAGCCAAATACCCTGACATTTaGAAGATGGCTTCTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTT +
Preference number: 1 (lower is better)
Translates to: DPKHIMASGAKYPDI*KMASFGFLVLQALV
Trigger: AACCAGGGCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGCAAATGTCAGGGTATTTGGCTCCAGAGGCCATGATGTGTTTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCGGTGAGGCGGTaGTTTTCTAAGACTTCCTATCAGAAGCTGTGCATACTGGTGGGT +
Preference number: 1 (lower is better)
Translates to: ERDFTAWLQLEAVRR*FSKTSYQKLCILVG
Trigger: ACCCACCAGTATGCACAGCTTCTGATAGGAAGTCTTAGAAAAGCACCGCCTCACCGCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp ATGGAGACCACGATTCTGTGTAGTCCTGCACGCTGGGCGGGGGATTaGCTGGAGGTTTCTTTAGACCTGTCTAGCTCACACAGTCTTGAT +
Preference number: 1 (lower is better)
Translates to: METTILCSPARWAGD*LEVSLDLSSSHSLD
Trigger: ATCAAGACTGTGTGAGCTAGACAGGTCTAAAGAAACCTCCAGGCAATCCCCCGCCCAGCGTGCAGGACTACACAGAATCGTGGTCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp CGTCTCTGTGTTCTCACTAGCACTACCTTGGTCCACCCTGCCATCTaGTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCA +
Preference number: 1 (lower is better)
Translates to: RLCVLTSTTLVHPAI*FPPPLLHSESFSAA
Trigger: TGCTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGTGGACCAAGGTAGTGCTAGTGAGAACACAGAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp TTGCTGACATGGAAAAGGAAACTTCGTGGGGGAAAGAGATCTGCTTaGAGTCGGCCAGAGAGACAGAACCAGGGCAGTGGTGAGCTCTCA +
Preference number: 1 (lower is better)
Translates to: LLTWKRKLRGGKRSA*SRPERQNQGSGELS
Trigger: TGAGAGCTCACCACTGCCCTGGTTCTGTCTCTCTGGCCGACTGCAAGCAGATCTCTTTCCCCCACGAAGTTTCCTTTTCCATGTCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp ACTGTAGGCATTCTCACTTCACACCCATCCCAATCCCCTCCCCCTTaGTGTCCTCTTGTACAGAGGACTGAAAGCACAACACTCTCTCCC +
Preference number: 1 (lower is better)
Translates to: TVGILTSHPSQSPPP*CPLVQRTESTTLSP
Trigger: GGGAGAGAGTGTTGTGCTTTCAGTCCTCTGTACAAGAGGACAGCAAGGGGGAGGGGATTGGGATGGGTGTGAAGTGAGAATGCCTACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp AACACATCATGGCCTCTGGAGCCAAATACCCTGACATTTGCAAGATaGCTTCTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGG +
Preference number: 1 (lower is better)
Translates to: NTSWPLEPNTLTFAR*LLLGSWCCRPWFPR
Trigger: CCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGCAAATGTCAGGGTATTTGGCTCCAGAGGCCATGATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp ACAGATAAAGCCCCAGCGCCTCTTCTGGACTCAGATGCCCTAGGCTaGCTGTCTGGCTGTGCTTTCCAGACAGTGTGTATGTGGAATTGT +
Preference number: 1 (lower is better)
Translates to: TDKAPAPLLDSDALG*LSGCAFQTVCMWNC
Trigger: ACAATTCCACATACACACTGTCTGGAAAGCACAGCCAGACAGCCAGCCTAGGGCATCTGAGTCCAGAAGAGGCGCTGGGGCTTTATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp TCCCTCAAATCTCTCCACGTCTCTGTGTTCTCACTAGCACTACCTTaGTCCACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTG +
Preference number: 1 (lower is better)
Translates to: SLKSLHVSVFSLALP*STLPSAFLLHSCIL
Trigger: CAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGTGGACCAAGGTAGTGCTAGTGAGAACACAGAGACGTGGAGAGATTTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp ATGGGGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTaGCCAGTCCTTAGTGGAGGACATTTCTTTCCATCCTGCATCCAG +
Preference number: 1 (lower is better)
Translates to: MGWGMCVEAAPSAGT*PVLSGGHFFPSCIQ
Trigger: CTGGATGCAGGATGGAAAGAAATGTCCTCCACTAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp TCCTTAGCACATAAGACCCTGTCCGAGGACTGTGGCATGACGTGCTaGAGTCACGATTCTGTCACCCAGTCAGGTCATCAGTGTCAGAGA +
Preference number: 1 (lower is better)
Translates to: SLAHKTLSEDCGMTC*SHDSVTQSGHQCQR
Trigger: TCTCTGACACTGATGACCTGACTGGGTGACAGAATCGTGACTCCAGCACGTCATGCCACAGTCCTCGGACAGGGTCTTATGTGCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp GCTGCTAGCCAAGACTCTGGATTCTCTGTGGCCACAGTCATATGGTaGGGGCCTCTTGGAGTTCATTCAAACTTTAAGGGAGCCCCACAG +
Preference number: 1 (lower is better)
Translates to: AASQDSGFSVATVIW*GPLGVHSNFKGAPQ
Trigger: CTGTGGGGCTCCCTTAAAGTTTGAATGAACTCCAAGAGGCCCTCACCATATGACTGTGGCCACAGAGAATCCAGAGTCTTGGCTAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp CCCATGGTTATCTCATGGGTCCCTGAAGTCCAACTTCTCCTTCATTaGACTCATCACCTCTTCTGTTCCTCCTCCTGGGTTCCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: PMVISWVPEVQLLLH*THHLFCSSSWVPRL
Trigger: GAGCCTGGGAACCCAGGAGGAGGAACAGAAGAGGTGATGAGTTCAATGAAGGAGAAGTTGGACTTCAGGGACCCATGAGATAACCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CTGGAGGTTTCTTTAGACCTGTCTAGCTCACACAGTCTTGATGCCTaGGTTTTAGGCTGCTGTACTGTTGCTGGGGCTCACTTCCTGTGG +
Preference number: 1 (lower is better)
Translates to: LEVSLDLSSSHSLDA*VLGCCTVAGAHFLW
Trigger: CCACAGGAAGTGAGCCCCAGCAACAGTACAGCAGCCTAAAACCCAGGCATCAAGACTGTGTGAGCTAGACAGGTCTAAAGAAACCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp TTTCCCAGAACTCCTTGTTGGATTCCTTCCAAACAGGTTTACCACTaGGAGAGCCTGTTGGTTGGGGAGGGCAGGAAGAGGGAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: FPRTPCWIPSKQVYH*ESLLVGEGRKREER
Trigger: TCTTTCCTCCCTCTTCCTGCCCTCCCCAACCAACAGGCTCTCCCAGTGGTAAACCTGTTTGGAAGGAATCCAACAAGGAGTTCTGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp CTGCACCAAAGAAAGGCATCCCTATCAATGTCACTGTTCCTGAAATaGTGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCG +
Preference number: 1 (lower is better)
Translates to: LHQRKASLSMSLFLK*WENHIPASGKQSLS
Trigger: CGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATCATTTCAGGAACAGTGACATTGATAGGGATGCCTTTCTTTGGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GGTAGGCTGTTATTTTGCCCGCAGATCAAGTCCTCACTGTCTAGATaGCTCTATCATGGGGATCTCTTCTTCCCTCTCTGGATGGCTCTG +
Preference number: 1 (lower is better)
Translates to: GRLLFCPQIKSSLSR*LYHGDLFFPLWMAL
Trigger: CAGAGCCATCCAGAGAGGGAAGAAGAGATCCCCATGATAGAGGCATCTAGACAGTGAGGACTTGATCTGCGGGCAAAATAACAGCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp TTAGACCTGTCTAGCTCACACAGTCTTGATGCCTGGGTTTTAGGCTaGTGTACTGTTGCTGGGGCTCACTTCCTGTGGGTAGGCTGTTAT +
Preference number: 1 (lower is better)
Translates to: LDLSSSHSLDAWVLG*CTVAGAHFLWVGCY
Trigger: ATAACAGCCTACCCACAGGAAGTGAGCCCCAGCAACAGTACAGCAGCCTAAAACCCAGGCATCAAGACTGTGTGAGCTAGACAGGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp TCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGTaGCCACAGTCATATGGTGAGGGCCTCTTGGAGTTCATTCAAACT +
Preference number: 1 (lower is better)
Translates to: SSALRRLLAKTLDSL*PQSYGEGLLEFIQT
Trigger: AGTTTGAATGAACTCCAAGAGGCCCTCACCATATGACTGTGGCCACAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp GACGACCAGAAGGAAGCTGCTAGGCTGGGCCAGGATTCTAAATGCTaGGGAGGTAATTCAGAGCCACGAAAAGTTGCACCATATGCTTTG +
Preference number: 1 (lower is better)
Translates to: DDQKEAARLGQDSKC*GGNSEPRKVAPYAL
Trigger: CAAAGCATATGGTGCAACTTTTCGTGGCTCTGAATTACCTCCTCAGCATTTAGAATCCTGGCCCAGCCTAGCAGCTTCCTTCTGGTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp AGAACCTGCACCAAAGAAAGGCATCCCTATCAATGTCACTGTTCCTaGAATGATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCC +
Preference number: 1 (lower is better)
Translates to: RTCTKERHPYQCHCS*NDGRTTSLLQGSSP
Trigger: GGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATCATTTCAGGAACAGTGACATTGATAGGGATGCCTTTCTTTGGTGCAGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp CAAGTCCTCTCTTGGAATGCTGCTCAGAAAAATAGATGTATTGTTTaGGAAACCCTGCAGGCTTGTCCCGCATGCTCTAGCCCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: QVLSWNAAQKNRCIV*ETLQACPACSSPLL
Trigger: CAGGAGGGGGCTAGAGCATGCGGGACAAGCCTGCAGGGTTTCTCAAACAATACATCTATTTTTCTGAGCAGCATTCCAAGAGAGGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp CTTCTGGGAACTTCACAATGGCTAAAGTGTGCTAATGGGATGATGTaGCCTTGTACACCCACTGCCTCTGAACTCTGCTCTGCATTGCTG +
Preference number: 1 (lower is better)
Translates to: LLGTSQWLKCANGMM*PCTPTASELCSALL
Trigger: CAGCAATGCAGAGCAGAGTTCAGAGGCAGTGGGTGTACAAGGGCACATCATCCCATTAGCACACTTTAGCCATTGTGAAGTTCCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp TGTGCCCTTGTACACCCACTGCCTCTGAACTCTGCTCTGCATTGCTaGGCAAACTACATTTCCCAGAACTCCTTGTTGGATTCCTTCCAA +
Preference number: 1 (lower is better)
Translates to: CALVHPLPLNSALHC*ANYISQNSLLDSFQ
Trigger: TTGGAAGGAATCCAACAAGGAGTTCTGGGAAATGTAGTTTGCTCAGCAATGCAGAGCAGAGTTCAGAGGCAGTGGGTGTACAAGGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp TGCAGTCGGCCAGAGAGACAGAACCAGGGCAGTGGTGAGCTCTCATaGCCTGGTGTCTGTTGCCTTCTGGTTAAGTTTTTCATTTGTAAT +
Preference number: 1 (lower is better)
Translates to: CSRPERQNQGSGELS*PGVCCLLVKFFICN
Trigger: ATTACAAATGAAAAACTTAACCAGAAGGCAACAGACACCAGGTCATGAGAGCTCACCACTGCCCTGGTTCTGTCTCTCTGGCCGACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp AGGACTGAAAGCACAACACTCTCTCCCTCCCTCCCTTATAGGTGGTaGCGATCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAA +
Preference number: 1 (lower is better)
Translates to: RTESTTLSPSLPYRW*RSCDSLLVNEMQQK
Trigger: TTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGATCGTCACCACCTATAAGGGAGGGAGGGAGAGAGTGTTGTGCTTTCAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GCTAATGGGATGATGTGCCCTTGTACACCCACTGCCTCTGAACTCTaGTCTGCATTGCTGAGCAAACTACATTTCCCAGAACTCCTTGTT +
Preference number: 1 (lower is better)
Translates to: ANGMMCPCTPTASEL*SALLSKLHFPELLV
Trigger: AACAAGGAGTTCTGGGAAATGTAGTTTGCTCAGCAATGCAGAGCAGAGTTCAGAGGCAGTGGGTGTACAAGGGCACATCATCCCATTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp ACTGTGACTATATCACTTCTGACGACCAGAAGGAAGCTGCTAGGCTaGGCCAGGATTCTAAATGCTGAGGAGGTAATTCAGAGCCACGAA +
Preference number: 1 (lower is better)
Translates to: TVTISLLTTRRKLLG*ARILNAEEVIQSHE
Trigger: TTCGTGGCTCTGAATTACCTCCTCAGCATTTAGAATCCTGGCCCAGCCTAGCAGCTTCCTTCTGGTCGTCAGAAGTGATATAGTCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CCCTGGGGGCTATCTCAACACCCCTACACTCTCACCGCACGTATTTaGTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTC +
Preference number: 1 (lower is better)
Translates to: PWGLSQHPYTLTARI*SAMNMTNSRRLSLF
Trigger: GAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGACCAAATACGTGCGGTGAGAGTGTAGGGGTGTTGAGATAGCCCCCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp GGACCCCATGCAGAAGCAATAGGGCAGCCTGGTCCCATATCCTCATaGAATGCCTCTTATAATTGTGACATCTTGCAATTGTGGAGGACT +
Preference number: 1 (lower is better)
Translates to: GPHAEAIGQPGPISS*NASYNCDILQLWRT
Trigger: AGTCCTCCACAATTGCAAGATGTCACAATTATAAGAGGCATTTCATGAGGATATGGGACCAGGCTGCCCTATTGCTTCTGCATGGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp GTCCTTGTCTTAATCACTCAGTGGCACTTGGCACTTATTCCTTCTTaGAACCCTTGTTTCCCTTGGCTTTGTGGCATCCTGTGCTCTTGG +
Preference number: 1 (lower is better)
Translates to: VLVLITQWHLALIPS*NPCFPWLCGILCSW
Trigger: CCAAGAGCACAGGATGCCACAAAGCCAAGGGAAACAAGGGTTTCAAGAAGGAATAAGTGCCAAGTGCCACTGAGTGATTAAGACAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GCTCTCAAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTaGCCAGATTCCAGGACTTACAGTGAGAAAGCGCCTTCTGGGAAC +
Preference number: 1 (lower is better)
Translates to: ALKNGPERGQEYNFL*PDSRTYSEKAPSGN
Trigger: GTTCCCAGAAGGCGCTTTCTCACTGTAAGTCCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTTGAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CTGCTCTGCATTGCTGAGCAAACTACATTTCCCAGAACTCCTTGTTaGATTCCTTCCAAACAGGTTTACCACTGGGAGAGCCTGTTGGTT +
Preference number: 1 (lower is better)
Translates to: LLCIAEQTTFPRTPC*IPSKQVYHWESLLV
Trigger: AACCAACAGGCTCTCCCAGTGGTAAACCTGTTTGGAAGGAATCCAACAAGGAGTTCTGGGAAATGTAGTTTGCTCAGCAATGCAGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp GCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCCTTCCTGCCATaGACTAGAAGGGGAAAGAAGAGTTTGACATTCAAGTTTGACTCT +
Preference number: 1 (lower is better)
Translates to: AGESLRSQVSFPFLP*TRRGKKSLTFKFDS
Trigger: AGAGTCAAACTTGAATGTCAAACTCTTCTTTCCCCTTCTAGTTCATGGCAGGAAGGGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp GCCTCAGTAGAGTTTGCACTATTATTAGGGCAAGTAAGCTGCTTCTaGAAAGAAGGGGTTTGCAAAGCCAACCCAGGCAAAAGCAATCTG +
Preference number: 1 (lower is better)
Translates to: ASVEFALLLGQVSCF*KEGVCKANPGKSNL
Trigger: CAGATTGCTTTTGCCTGGGTTGGCTTTGCAAACCCCTTCTTTTCAGAAGCAGCTTACTTGCCCTAATAATAGTGCAAACTCTACTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp TCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTaGTTATCTTGCAGCTATATTAGGTCATGTGACAAAGTTCTGGCC +
Preference number: 1 (lower is better)
Translates to: SSWEYQPCLVHGHFS*LSCSYIRSCDKVLA
Trigger: GGCCAGAACTTTGTCACATGACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp ATGAAGAATAGCTTATTCTTTGCCAGGTTGAAGATAGAAAAGGAATaGAGGGCCGGAGAAGTACAGCTGGGTGAAGCACAGAGCAGCCTA +
Preference number: 1 (lower is better)
Translates to: MKNSLFFARLKIEKE*RAGEVQLGEAQSSL
Trigger: TAGGCTGCTCTGTGCTTCACCCAGCTGTACTTCTCCGGCCCTTCATTCCTTTTCTATCTTCAACCTGGCAAAGAATAAGCTATTCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp TCATTACAGTTGAATGCTTTCATAACTGATACAGGAGGGACCCTGTaGTTGGCAGTTCCACTAGACTGCATGGAGATGGGTGGAGTTATC +
Preference number: 1 (lower is better)
Translates to: SLQLNAFITDTGGTL*LAVPLDCMEMGGVI
Trigger: GATAACTCCACCCATCTCCATGCAGTCTAGTGGAACTGCCAATCACAGGGTCCCTCCTGTATCAGTTATGAAAGCATTCAACTGTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp CTTCTTCCCTCTCTGGATGGCTCTGATCCCCAAGTTATTTCCTGTTaGCTAGGTAACACCTCTAATTGGATGCCTTTTAATCGTTCCCTT +
Preference number: 1 (lower is better)
Translates to: LLPSLDGSDPQVISC*LGNTSNWMPFNRSL
Trigger: AAGGGAACGATTAAAAGGCATCCAATTAGAGGTGTTACCTAGGCAACAGGAAATAACTTGGGGATCAGAGCCATCCAGAGAGGGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp AGTACAGAGCATGCACACCGTAGGTTCTCACATATGTTTGTTGAGTaGATGAATACAATACCAAACGAATGGACAGGACAGAGCTGTGGG +
Preference number: 1 (lower is better)
Translates to: STEHAHRRFSHMFVE*MNTIPNEWTGQSCG
Trigger: CCCACAGCTCTGTCCTGTCCATTCGTTTGGTATTGTATTCATTCACTCAACAAACATATGTGAGAACCTACGGTGTGCATGCTCTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp CCACTGCAATTTCCAAATCTGGGGGAAATGCCACAGTCCGCAAGTTaGTGCTATGTTTCATCTCATTGCATAATACTACACCATTCTCTG +
Preference number: 1 (lower is better)
Translates to: PLQFPNLGEMPQSAS*CYVSSHCIILHHSL
Trigger: CAGAGAATGGTGTAGTATTATGCAATGAGATGAAACATAGCACCAACTTGCGGACTGTGGCATTTCCCCCAGATTTGGAAATTGCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp ATTCACTTACATTTAAATAGCTGTGTGTGGCTTGTGGCTGCCTATTaGACTGTGCAGTTCTGGAGAATGGTACTTTACTTGTCCTTGGGG +
Preference number: 1 (lower is better)
Translates to: IHLHLNSCVWLVAAY*TVQFWRMVLYLSLG
Trigger: CCCCAAGGACAAGTAAAGTACCATTCTCCAGAACTGCACAGTCCAATAGGCAGCCACAAGCCACACACAGCTATTTAAATGTAAGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GGGGAAATGCCACAGTCCGCAAGTTGGTGCTATGTTTCATCTCATTaGATAATACTACACCATTCTCTGTGTGTAGTGGCTGTTCTATAT +
Preference number: 1 (lower is better)
Translates to: GEMPQSASWCYVSSH*IILHHSLCVVAVLY
Trigger: ATATAGAACAGCCACTACACACAGAGAATGGTGTAGTATTATGCAATGAGATGAAACATAGCACCAACTTGCGGACTGTGGCATTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp CTGCAATTTCCAAATCTGGGGGAAATGCCACAGTCCGCAAGTTGGTaGTATGTTTCATCTCATTGCATAATACTACACCATTCTCTGTGT +
Preference number: 1 (lower is better)
Translates to: LQFPNLGEMPQSASW*YVSSHCIILHHSLC
Trigger: ACACAGAGAATGGTGTAGTATTATGCAATGAGATGAAACATAGCACCAACTTGCGGACTGTGGCATTTCCCCCAGATTTGGAAATTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp CTCGTCGTTTATCTCTATTCAGTGGAACACAGCAGCACTGTGACCTaGCCACGAGAAGAAGGATTTTTAGAACTTATCTTAGGGCAATTT +
Preference number: 1 (lower is better)
Translates to: LVVYLYSVEHSSTVT*PREEGFLELILGQF
Trigger: AAATTGCCCTAAGATAAGTTCTAAAAATCCTTCTTCTCGTGGGCAGGTCACAGTGCTGCTGTGTTCCACTGAATAGAGATAAACGACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 90 bp GAACATGAGATGAACAACACTCTTCTTGGGAGTACCAGCCTTGCTTaGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGT +
Preference number: 1 (lower is better)
Translates to: EHEMNNTLLGSTSLA*FMATFPDYLAAILG
Trigger: ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTTCATCTCATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 90 bp AGGCTGGTGTGTATGTGTGTGTGTATATATATATACATATATGCATaGTGCTGTGCAAATGCCCAGGGCTGTCTGGCATTTTCCACAAAA +
Preference number: 1 (lower is better)
Translates to: RLVCMCVCIYIYIYA*CCANAQGCLAFSTK
Trigger: TTTTGTGGAAAATGCCAGACAGCCCTGGGCATTTGCACAGCATCATGCATATATGTATATATATATACACACACACATACACACCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 90 bp GTGTATGTGTGTGTGTATATATATATACATATATGCATGATGCTGTaGAAATGCCCAGGGCTGTCTGGCATTTTCCACAAAATGAGAGCC +
Preference number: 1 (lower is better)
Translates to: VYVCVYIYIHICMML*KCPGLSGIFHKMRA
Trigger: GGCTCTCATTTTGTGGAAAATGCCAGACAGCCCTGGGCATTTGCACAGCATCATGCATATATGTATATATATATACACACACACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCCCCTGGGTGTGGGCCTaGGGGGCCACGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAPWVWA*GATFSL
Trigger: GAGAGAAAACGTGGCCCCCCAGGCCCACACCCAGGG...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCTCGGGAGGCAACATATaGCTGTCCCAACCCCCACCT +
Preference number: 2 (lower is better)
Translates to: GFLVLQALVPKDAAGRGASGGNI*LSQPPP
Trigger: AGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGA...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp TCTGAGAGCCTTCTCTGCCTACCCAGGCTGGGTGGCTGCCTCTCTTaGGTGTGCCCATGGCAGCCCAGAATGCCTGGTGGACAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: SESLLCLPRLGGCLS*VCPWQPRMPGGQGA
Trigger: GGCTCCCTGTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGAGAAGGCTCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCGGACTAACTCTGAGCTaGGAAAGGCCAGCTAAGCCC +
Preference number: 2 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAGLTLS*ERPAKP
Trigger: GGGCTTAGCTGGCCTTTCTCAGCTCAGAGTTAGTCC...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCGCCCTAGAGAACACGTaGGCCCCTGCGTGGGCAATC +
Preference number: 2 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRALENT*APAWAI
Trigger: GATTGCCCACGCAGGGGCGCACGTGTTCTCTAGGGC...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCTTGGGTTCCTGGTGCTaGAGGCCCTGGTTCCCAAGG +
Preference number: 2 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRLGSWC*RPWFPR
Trigger: CCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAA...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp CTGCTCCTCTGCCTGGGCCACTCTTCCTGCTCCTTGTCAGCAGGCTaGCTGCTCTCAGGCTCAGCATGGACAGCTGCTTCTGAGAGCCTT +
Preference number: 2 (lower is better)
Translates to: LLLCLGHSSCSLSAG*LLSGSAWTAASESL
Trigger: AAGGCTCTCAGAAGCAGCTGTCCATGCTGAGCCTGAGAGCAGCAAGCCTGCTGACAAGGAGCAGGAAGAGTGGCCCAGGCAGAGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCGTACTGCAGCGCCCTaGCCCCGTCAGCCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQRTAAP*PRQPPG
Trigger: TCCTGGAGGCTGACGGGGGCAGGGCGCTGCAGTACG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCTCCTATCAGAAGCTGTaGATACTGGTGGGTCACGCC +
Preference number: 2 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRSYQKL*ILVGHA
Trigger: GGCGTGACCCACCAGTATGCACAGCTTCTGATAGGA...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCATCTGGAGGTGGGTCCTaGTTCCTCCCATGGAGACCA +
Preference number: 2 (lower is better)
Translates to: SLPPSPPYKVRSLESPPASGGGS*FLPWRP
Trigger: TGGTCTCCATGGGAGGAACCAGGACCCACCTCCAGA...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAGACTGGATTGGGGGATaGGGACAGGGGAACATAGGC +
Preference number: 2 (lower is better)
Translates to: SLPPSPPYKVRSLESPPADWIGG*GQGNIG
Trigger: GCCTATGTTCCCCTGTCCCCATCCCCCAATCCAGTC...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAGGTTTAGTGCCAGTCTaGAAAACCCTCCTCGCTGCG +
Preference number: 2 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAGLVPV*KTLLAA
Trigger: CGCAGCGAGGAGGGTTTTGCAGACTGGCACTAAACC...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCATCCCCTCCTCACAGGTaGCCTGGACCGCCCACCATT +
Preference number: 2 (lower is better)
Translates to: WRHCFIQRTQRPDHLALASPPHR*PGPPTI
Trigger: AATGGTGGGCGGTCCAGGGCACCTGTGAGGAGGGGA...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTGCCCAGCAGGGCTCCTaGAGCCTCACCGCTCCCCTC +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSAQQGS*SLTAPL
Trigger: GAGGGGAGCGGTGAGGCTGCAGGAGCCCTGCTGGGC...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGCTTTTGGGTTCCTGGTaGTGCAGGCCCTGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWLLGSW*CRPWFP
Trigger: TGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAAGGCTGCTGTACTGTTaGTGGGGCTCACTTCCTGTG +
Preference number: 2 (lower is better)
Translates to: SLPPSPPYKVRSLESPPARLLYC*WGSLPV
Trigger: CACAGGAAGTGAGCCCCAGCAACAGTACAGCAGCCT...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTATCCCAAGGACGCAGCTaGCAGAGGTGCCTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLSQGRS*QRCLLQ
Trigger: CTGAAGGAGGCACCTCTGCCAGCTGCGTCCTTGGGA...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCCCTTTCAATGAAGCCTaGGTATCTGGCCTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRPFNEA*VSGLPP
Trigger: TGGAGGAAGGCCAGATACCCAGGCTTCATTGAAAGG...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAGGAGAGCCTGTTGGTTaGGGAGGGCAGGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLGEPVG*GGQEEG
Trigger: TCCCTCTTCCTGCCCTCCCCAACCAACAGGCTCTCC...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp TGGCCTCTGGAGCCAAATACCCTGACATTTGCAAGATGGCTTCTTTaGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTG +
Preference number: 2 (lower is better)
Translates to: WPLEPNTLTFARWLL*GSWCCRPWFPRTQL
Trigger: CAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGCAAATGTCAGGGTATTTGGCTCCAGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACTGTGGATGAGCTTGTaGAAGAAAGGACGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: SLPPSPPYKVRSLESPPALWMSL*KKGRLG
Trigger: CCCCAACCGTCCTTTCTTTCACAAGCTCATCCACAG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCCGCCCGGCAACCCCATaGTCTCTTAAAGGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: STHICQGERFHSMAPAGGRPATP*SLKGGK
Trigger: TTTTCCCCCTTTAAGAGATCATGGGGTTGCCGGGCG...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCATTTGGGGTTGCCGGCTaGTTCTGTGCATGGGGACGG +
Preference number: 2 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAFGVAG*FCAWGR
Trigger: CCGTCCCCATGCACAGAAGCAGCCGGCAACCCCAAA...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACATATGCTTTGGGGTTaGCGGCTGCTTCTGTGCATG +
Preference number: 2 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAHMLWG*RLLLCM
Trigger: CATGCACAGAAGCAGCCGGCAACCCCAAAGCATATG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCATCTCCTGGCCAGCGCTaGTTCACTGGCTTCACCCCA +
Preference number: 2 (lower is better)
Translates to: WRHCFIQRTQRPDHLALASPGQR*FTGFTP
Trigger: TGGGGTGAAGCCAGTGAAGCAGCGCTGGCCAGGAGA...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACAGGAGGTCCCTTGGTaGCCTGGGCTCTGTTTCACT +
Preference number: 2 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLQEVPW*PGLCFT
Trigger: AGTGAAACAGAGCCCAGGGCACCAAGGGACCTCCTG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGAGGAGGAGGAGAAGCTaGAGGGCTGCGCCCGGCAAC +
Preference number: 2 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLRRRRS*RAAPGN
Trigger: GTTGCCGGGCGCAGCCCTCCAGCTTCTCCTCCTCCT...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACCAGCGCTGCTTCACTaGCTTCACCCCAGATTAGGG +
Preference number: 2 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLPALLH*LHPRLG
Trigger: CCCTAATCTGGGGTGAAGCCAGTGAAGCAGCGCTGG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCAGAGCCACGAAAAGTTaGACCATATGCTTTGGGGTT +
Preference number: 2 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRRATKS*TICFGV
Trigger: AACCCCAAAGCATATGGTGCAACTTTTCGTGGCTCT...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAATGATGCTGTGCAAATaGCCAGGGCTGTCTGGCATT +
Preference number: 2 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAMMLCK*PGLSGI
Trigger: AATGCCAGACAGCCCTGGGCATTTGCACAGCATCAT...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTATACCTTGGTCCACCCTaGCATCTGCTTTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLYLGPP*HLLSSS
Trigger: GGAGGAGGAAAGCAGATGGCAGGGTGGACCAAGGTA...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACTAGGACACCCAGGGTaGCTTCTTTACCTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: SLPPSPPYKVRSLESPPALGHPG*LLYLSP
Trigger: AGGAGAAAGGTAAAGAAGCCACCCTGGGTGTCCTAG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGGCAATCCCTTCACTGTaGCCGCAACCATGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQAIPSL*PQPWVG
Trigger: TCCAACCCATGGTTGCGGTCACAGTGAAGGGATTGC...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGCTGGGAGGCCTGTCTaGAGGACGGAGGATCCTGGG +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALAGRPV*RTEDPG
Trigger: CCCAGGATCCTCCGTCCTTCAGACAGGCCTCCCAGC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGATGGACAGCTGCTTCTaGGAGCCTTCTCTGCCTACC +
Preference number: 2 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQMDSCF*EPSLPT
Trigger: GGTAGGCAGAGAAGGCTCTCAGAAGCAGCTGTCCAT...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAGGGGGATTCAAGATCTaGCGATCCGAGCCTGGAGAT +
Preference number: 2 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAGGFKI*RSEPGD
Trigger: ATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCC...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTCATGCTCAACAGGGTaGGGAGCCCAGGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSSCSTG*GAQGSG
Trigger: CCCACTCCCCTGGGCTCCCCACCCTGTTGAGCATGA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp GCAAAAATACACATGTGCCACTGGATCCTGAGCTGCCATTGTACCTaGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: AKIHMCHWILSCHCT*EDWRFSGKLGGGKR
Trigger: CCTCTTCCCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTCAGGATCCAGTGGCACATGTGTATTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAAGTCACAGTGAATCCTaGAAGCATGGTTTTCACAGG +
Preference number: 2 (lower is better)
Translates to: SLPPSPPYKVRSLESPPASHSES*KHGFHR
Trigger: CCTGTGAAAACCATGCTTTCAGGATTCACTGTGACT...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTATCCACTCCTGCATTCTaGGTCATTTTCGGCAGCACA +
Preference number: 2 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLSTPAF*VIFGST
Trigger: TGTGCTGCCGAAAATGACTCAGAATGCAGGAGTGGA...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAGCTGAGTATCGTTCTTaGTGGAAATCCCCGTGGAAC +
Preference number: 2 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLAEYRS*WKSPWN
Trigger: GTTCCACGGGGATTTCCATCAAGAACGATACTCAGC...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCAGGCCTGGAGGCACTaGTTCATTCAGAGGACACAA +
Preference number: 2 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQQAWRH*FIQRTQ
Trigger: TTGTGTCCTCTGAATGAAGCAGTGCCTCCAGGCCTG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCTCCCTTGCTCTGCATaGTCCAGTCCTGCAGAACTA +
Preference number: 2 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQLPCSA*SSPAEL
Trigger: TAGTTCTGCAGGACTGGAGCATGCAGAGCAAGGGAG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCAAGATGGCTTCTTTTaGGTTCCTGGTGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQQDGFF*VPGAAG
Trigger: GCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTGAAGAGGGGGTCTGCTaGGAGGCCTGTCTGAAGGAC +
Preference number: 2 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPEEGVC*EACLKD
Trigger: GTCCTTCAGACAGGCCTCCCAGCAGACCCCCTCTTC...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGCCTGGGGGTCAGGAATaGCCTCAGCAGGCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRPGGQE*PQQALP
Trigger: AGGGAGGGCCTGCTGAGGCCATTCCTGACCCCCAGG...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTCCCAGGCTCAGTGGTaGCACCACTGTCTACCTGGC +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSSQAQW*HHCLPG
Trigger: GCCAGGTAGACAGTGGTGCCACCACTGAGCCTGGGA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTGAACCCCAGCATCTGTaGTGTCTGTGGTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSEPQHL*CLWWEG
Trigger: CCCCTCCCACCACAGACACCACAGATGCTGGGGTTC...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp GCCAGGATTCTAAATGCTGAGGAGGTAATTCAGAGCCACGAAAAGTaGCACCATATGCTTTGGGGTTGCCGGCTGCTTCTGTGCATGGGG +
Preference number: 2 (lower is better)
Translates to: ARILNAEEVIQSHEK*HHMLWGCRLLLCMG
Trigger: CCCCATGCACAGAAGCAGCCGGCAACCCCAAAGCATATGGTGCAACTTTTCGTGGCTCTGAATTACCTCCTCAGCATTTAGAATCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp AAGACTCTGGATTCTCTGTGGCCACAGTCATATGGTGAGGGCCTCTaGGAGTTCATTCAAACTTTAAGGGAGCCCCACAGCACCGGCATG +
Preference number: 2 (lower is better)
Translates to: KTLDSLWPQSYGEGL*EFIQTLREPHSTGM
Trigger: CATGCCGGTGCTGTGGGGCTCCCTTAAAGTTTGAATGAACTCCAAGAGGCCCTCACCATATGACTGTGGCCACAGAGAATCCAGAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCAGCGCCAGCAGTGACTaGGAGAAGCAAACCACGCCC +
Preference number: 2 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRSASSD*EKQTTP
Trigger: GGGCGTGGTTTGCTTCTCTCAGTCACTGCTGGCGCT...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACTCTCTGGATGGCTCTaGTCCCCAAGTTATTTCCTG +
Preference number: 2 (lower is better)
Translates to: WRHCFIQRTQRPDHLALALSGWL*SPSYFL
Trigger: CAGGAAATAACTTGGGGATCAGAGCCATCCAGAGAG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCTGCCGGCTGCTTCTGTaGATGGGGACGGGGTTTAGT +
Preference number: 2 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVCRLLL*MGTGFS
Trigger: ACTAAACCCCGTCCCCATGCACAGAAGCAGCCGGCA...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCGCTGGGCGGGGGATTaGCTGGAGGTTTCTTTAGAC +
Preference number: 2 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPRWAGD*LEVSLD
Trigger: GTCTAAAGAAACCTCCAGGCAATCCCCCGCCCAGCG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTCTGAGAGCCTTCTCTaGCTACCCAGGCTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALSESLL*LPRLGG
Trigger: GCCACCCAGCCTGGGTAGGCAGAGAAGGCTCTCAGA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCTGGGCCACTCTTCCTaGTCCTTGTCAGCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPLGHSS*SLSAGL
Trigger: CAAGCCTGCTGACAAGGAGCAGGAAGAGTGGCCCAG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTAGAAGCTGTGCATACTaGTGGGTCACGCCGTGCCTG +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSRSCAY*WVTPCL
Trigger: CAGGCACGGCGTGACCCACCAGTATGCACAGCTTCT...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGAGAGATTTCACAGCATaGCTCCAGCTGGAGGCGGTG +
Preference number: 2 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLRDFTA*LQLEAV
Trigger: CACCGCCTCCAGCTGGAGCCATGCTGTGAAATCTCT...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCTGATGAGCCCACCCTaGGGGTCAGGAATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALLMSPP*GSGMAS
Trigger: TGAGGCCATTCCTGACCCCCAGGGTGGGCTCATCAG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp AACATAGGCAAAAATACACATGTGCCACTGGATCCTGAGCTGCCATaGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: NIGKNTHVPLDPELP*YLGGLAFLWEVGRW
Trigger: CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTCAGGATCCAGTGGCACATGTGTATTTTTGCCTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGCCCACAGCACCGGCATaGTGGGTAAGTCCAGGCCTA +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRPTAPA*WVSPGL
Trigger: TAGGCCTGGACTTACCCATCATGCCGGTGCTGTGGG...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGGTGCTCTGGGGTGCCTaGAAGTGCCAGAGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRVLWGA*KCQSCF
Trigger: GAAGCAGCTCTGGCACTTTCAGGCACCCCAGAGCAC...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTAACACAGCAGCACTGTaGCCTGCCCACGAGAAGAAG +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSNTAAL*PAHEKK
Trigger: CTTCTTCTCGTGGGCAGGTCACAGTGCTGCTGTGTT...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCAGCTACCTCCCTCCTaGCTTCCTCTGCCTCCAATA +
Preference number: 2 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPQLPPS*LPLPPI
Trigger: TATTGGAGGCAGAGGAAGGCAGGAGGGAGGTAGCTG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTCAGGCTTGTCCCGCATaGTCTAGCCCCCTCCTGAGA +
Preference number: 2 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIQACPA*SSPLLR
Trigger: TCTCAGGAGGGGGCTAGAGCATGCGGGACAAGCCTG...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGTTGCACCATATGCTTTaGGGTTGCCGGCTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLLHHML*GCRLLL
Trigger: CAGAAGCAGCCGGCAACCCCAAAGCATATGGTGCAA...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGATGCAATTTCCAAATCTaGGGGAAATGCCACAGTCCG +
Preference number: 2 (lower is better)
Translates to: LVKERTVGGFKICRSEPGCNFQI*GKCHSP
Trigger: CGGACTGTGGCATTTCCCCCAGATTTGGAAATTGCA...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAACTCTGGATTCTCTGTaGCCACAGTCATATGGTGAG +
Preference number: 2 (lower is better)
Translates to: WRHCFIQRTQRPDHLALATLDSL*PQSYGE
Trigger: CTCACCATATGACTGTGGCCACAGAGAATCCAGAGT...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp GAGTCTAGGAAGCACCGCCAACAGAGAAGACTGCCAAGAAACATTTaGAGTTTTTCTTCTCTGGAGGTGGGTCCTGGTTCCTCCCATGGA +
Preference number: 2 (lower is better)
Translates to: ESRKHRQQRRLPRNI*SFSSLEVGPGSSHG
Trigger: TCCATGGGAGGAACCAGGACCCACCTCCAGAGAAGAAAAACTCAAAATGTTTCTTGGCAGTCTTCTCTGTTGGCGGTGCTTCCTAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTTGTATCATGGCAGTGTaGCTGAGACTGGATTGGGGG +
Preference number: 2 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPCIMAV*LRLDWG
Trigger: CCCCCAATCCAGTCTCAGTCACACTGCCATGATACA...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACATGTCGTCTGGGGCGCTaGGCCCTTTGGCCTGAGATG +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTCRLGR*ALWPEM
Trigger: CATCTCAGGCCAAAGGGCTCAGCGCCCCAGACGACA...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCCTTCTCCTTTGGCCATaGGGGCTCAGTCATCCCTCA +
Preference number: 2 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRLLLWP*GLSHPS
Trigger: TGAGGGATGACTGAGCCCTCATGGCCAAAGGAGAAG...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGGGGCCAGGTCCGAGTaGAGAAATCCTCAATGCATG +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALGARSE*RNPQCM
Trigger: CATGCATTGAGGATTTCTGCACTCGGACCTGGCCCC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGGTGGGAAGGACCCCATaGAGAAGCAATAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRVGRTP*RSNRAA
Trigger: GGCTGCCCTATTGCTTCTGCATGGGGTCCTTCCCAC...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTGGCTGCTTCTGTGCATaGGGACGGGGTTTAGTGCCA +
Preference number: 2 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIGCFCA*GRGLVP
Trigger: TGGCACTAAACCCCGTCCCCATGCACAGAAGCAGCC...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTGCAGAAGGCAAGTCTaGGAGAATCTGTCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSCRRQV*ENLSLS
Trigger: GCTGAGGGACAGATTCTCCCAGACTTGCCTTCTGCA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTGGGCACTCACTGGGCTaGCCTGACAGTCACAGTGAA +
Preference number: 2 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIGHSLG*PDSHSE
Trigger: TTCACTGTGACTGTCAGGCCAGCCCAGTGAGTGCCC...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTCCTACCCAGGCTGGGTaGCTGCCTCTCTTTGGTGTG +
Preference number: 2 (lower is better)
Translates to: SLAWFMATFPDYLAAILGPTQAG*LPLFGV
Trigger: CACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGG...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTTCTGCCTACCCAGGCTaGGTGGCTGCCTCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: AILGRGADKMVYRRNRSISAYPG*VAASLW
Trigger: CCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGA...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTTAAAACCCCTCCACTaGCTTGCCAGTGTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSLKPLH*LASVLR
Trigger: CCTGAGGACACTGGCAAGCCAGTGGAGGGGTTTTAA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAGTCTTAATCACTCAGTaGCACTTGGCACTTATTCCT +
Preference number: 2 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLVLITQ*HLALIP
Trigger: AGGAATAAGTGCCAAGTGCCACTGAGTGATTAAGAC...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp ATGGACAGGACAGAGCTGTGGGCTAGCAGGAAGGATATCTGGCTTTaGCTTGAATTAGCTAGTGAATTGCTGTGTGGCCTCCTTACTGAG +
Preference number: 2 (lower is better)
Translates to: MDRTELWASRKDIWL*LELASELLCGLLTE
Trigger: CTCAGTAAGGAGGCCACACAGCAATTCACTAGCTAATTCAAGCAAAAGCCAGATATCCTTCCTGCTAGCCCACAGCTCTGTCCTGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp GCCCTGGGGGCTATCTCAACACCCCTACACTCTCACCGCACGTATTaGGTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATT +
Preference number: 2 (lower is better)
Translates to: ALGAISTPLHSHRTY*VSYEYDQLSSFISI
Trigger: AATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGACCAAATACGTGCGGTGAGAGTGTAGGGGTGTTGAGATAGCCCCCAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGGGATTCTATCTTTCCTaGCCCCAAACACATCATGGC +
Preference number: 2 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLGFYLS*PQTHHG
Trigger: GCCATGATGTGTTTGGGGTCAGGAAAGATAGAATCC...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTTCCAGCTGGAGGCGGTaGGGCGGTGCTTTTCTAAGA +
Preference number: 2 (lower is better)
Translates to: SLAWFMATFPDYLAAILGSSWRR*GGAFLR
Trigger: TCTTAGAAAAGCACCGCCTCACCGCCTCCAGCTGGA...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTGGAGGCAGGCGGCTCTaGCAGACAGAAAGCAAACAG +
Preference number: 2 (lower is better)
Translates to: SLAWFMATFPDYLAAILGGGRRL*QTESKQ
Trigger: CTGTTTGCTTTCTGTCTGTCAGAGCCGCCTGCCTCC...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTCAAATCTGGGGGAAATaGCACAGTCCGCAAGTTGGT +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSQIWGK*HSPQVG
Trigger: ACCAACTTGCGGACTGTGGCATTTCCCCCAGATTTG...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTTCTTCTGGACTCAGATaGCCTAGGCTGGCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: QKANSSEGWQAAFYSSLISSGLR*PRLAVW
Trigger: CCAGACAGCCAGCCTAGGGCATCTGAGTCCAGAAGA...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAGAATATAACTTTCTCTaGCCAGATTCCAGGACTTAC +
Preference number: 2 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLEYNFL*PDSRTY
Trigger: GTAAGTCCTGGAATCTGGGCAGAGAAAGTTATATTC...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTGTGTGGCTTGTGGCTaGCTATTGGACTGTGCAGTT +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSCVACG*LLDCAV
Trigger: AACTGCACAGTCCAATAGGCAGCCACAAGCCACACA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGGCACCACTGTCTACCTaGCTGCTTAGCCTGAGACCT +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRAPLST*LLSLRP
Trigger: AGGTCTCAGGCTAAGCAGCCAGGTAGACAGTGGTGC...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp ATGATGTGCCCTTGTACACCCACTGCCTCTGAACTCTGCTCTGCATaGCTGAGCAAACTACATTTCCCAGAACTCCTTGTTGGATTCCTT +
Preference number: 2 (lower is better)
Translates to: MMCPCTPTASELCSA*LSKLHFPELLVGFL
Trigger: AAGGAATCCAACAAGGAGTTCTGGGAAATGTAGTTTGCTCAGCAATGCAGAGCAGAGTTCAGAGGCAGTGGGTGTACAAGGGCACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp GTGGCTGCCTATTGGACTGTGCAGTTCTGGAGAATGGTACTTTACTaGTCCTTGGGGAAGCAGAAACAAATGAAAACGAGGATCTGGAGC +
Preference number: 2 (lower is better)
Translates to: VAAYWTVQFWRMVLY*SLGKQKQMKTRIWS
Trigger: GCTCCAGATCCTCGTTTTCATTTGTTTCTGCTTCCCCAAGGACAAGTAAAGTACCATTCTCCAGAACTGCACAGTCCAATAGGCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTAGAAAGCGCCAGCAGTaGCTGAGAGAAGCAAACCAC +
Preference number: 2 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIRKRQQ*LREANH
Trigger: GTGGTTTGCTTCTCTCAGTCACTGCTGGCGCTTTCT...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTGCTCCTTAGACCAATaGAATCAGACTCCTGGGAGT +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSCSLDQ*NQTPGS
Trigger: ACTCCCAGGAGTCTGATTTCATTGGTCTAAGGAGCA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAATTCCTTTAGAAGATTaGTCAAGCTGCCTCCAATTG +
Preference number: 2 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAIPLED*SSCLQL
Trigger: CAATTGGAGGCAGCTTGAGCAATCTTCTAAAGGAAT...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTCAGGCAAAAGCAATCTaGTGGAAGAACTTCATCCCC +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSQAKAI*WKNFIP
Trigger: GGGGATGAAGTTCTTCCAGCAGATTGCTTTTGCCTG...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTTGTCAGCAGGCTTGCTaGTCTCAGGCTCAGCATGGA +
Preference number: 2 (lower is better)
Translates to: AILGRGADKMVYRRNRSICQQAC*SQAQHG
Trigger: TCCATGCTGAGCCTGAGAGCAGCAAGCCTGCTGACA...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCCTCAGAGGTCCCACTaGAGCTGCATAATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: AILGRGADKMVYRRNRSIPQRSH*SCIMSP
Trigger: AGGGGACATTATGCAGCTGCAGTGGGACCTCTGAGG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGGCTAATGGGATGATGTaGCCTTGTACACCCACTGCC +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRANGMM*PCTPTA
Trigger: GGCAGTGGGTGTACAAGGGCACATCATCCCATTAGC...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGAAAGAAAGGACGGTTaGGGGATTCAAGATCTGCCG +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALERKDG*GIQDLP
Trigger: CGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCACCCCAAACACATCATaGCCTCTGGAGCCAAATACC +
Preference number: 2 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRTPNTS*PLEPNT
Trigger: GGTATTTGGCTCCAGAGGCCATGATGTGTTTGGGGT...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCTGCCTGTATAAACTCTaGCACCTGTCCTTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRCLYKL*HLSLPS
Trigger: TGAGGGCAAGGACAGGTGCCAGAGTTTATACAGGCA...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGCTCTTCTTCCCTCTCTaGATGGCTCTGATCCCCAAG +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRLFFPL*MALIPK
Trigger: CTTGGGGATCAGAGCCATCCAGAGAGGGAAGAAGAG...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCTGTACCTTGGAGGACTaGCGTTTCTCTGGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRCTLED*RFSGKL
Trigger: CAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACA...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTTGCCTTCTCCAGGCCTaGAGGCACTGCTTCATTCAG +
Preference number: 2 (lower is better)
Translates to: SLAWFMATFPDYLAAILGCLLQA*RHCFIQ
Trigger: CTGAATGAAGCAGTGCCTCCAGGCCTGGAGAAGGCA...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTTCAGATGCCCTAGGCTaGCTGTCTGGCTGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: AILGRGADKMVYRRNRSISDALG*LSGCAF
Trigger: GAAAGCACAGCCAGACAGCCAGCCTAGGGCATCTGA...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp CTTAATCACTCAGTGGCACTTGGCACTTATTCCTTCTTGAAACCCTaGTTTCCCTTGGCTTTGTGGCATCCTGTGCTCTTGGTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: LNHSVALGTYSFLKP*FPLALWHPVLLVFS
Trigger: GGAGAAAACCAAGAGCACAGGATGCCACAAAGCCAAGGGAAACAAGGGTTTCAAGAAGGAATAAGTGCCAAGTGCCACTGAGTGATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp AGTCCTTGTCTTAATCACTCAGTGGCACTTGGCACTTATTCCTTCTaGAAACCCTTGTTTCCCTTGGCTTTGTGGCATCCTGTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: SPCLNHSVALGTYSF*KPLFPLALWHPVLL
Trigger: CAAGAGCACAGGATGCCACAAAGCCAAGGGAAACAAGGGTTTCAAGAAGGAATAAGTGCCAAGTGCCACTGAGTGATTAAGACAAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCATTTTCCTGCCCCTTaGAACCATGCTTACCATTCC +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALHFPAP*NHAYHS
Trigger: GGAATGGTAAGCATGGTTTCAAGGGGCAGGAAAATG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGAGGACACAAAGGCCTaGCCACCTGGCTTTAGCAAG +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTEDTKA*PPGFSK
Trigger: CTTGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTACAGGCCTTAGAACTTaGAAGGAACCCAAGGATCAT +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSTGLRT*KEPKDH
Trigger: ATGATCCTTGGGTTCCTTTCAAGTTCTAAGGCCTGT...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTAAGGGAGCAACCTCATaGGGTTTTGCTTTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSKGATS*GFALCL
Trigger: AAGACACAAAGCAAAACCTCATGAGGTTGCTCCCTT...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTAAAAGTTGCACCATATaGTTTGGGGTTGCCGGCTGC +
Preference number: 2 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIKSCTI*FGVAGC
Trigger: GCAGCCGGCAACCCCAAAGCATATGGTGCAACTTTT...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGCCTCCAATAGGCTGTaGATGGAGAAGACAAATCCT +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALASNRL*MEKTNP
Trigger: AGGATTTGTCTTCTCCATGCACAGCCTATTGGAGGC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTCAAGCTGCCTCCAATTaGCTCTTTCCAAAACCAAAG +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSQAASN*LFPKPK
Trigger: CTTTGGTTTTGGAAAGAGGCAATTGGAGGCAGCTTG...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTAATTGTGCTCTGGGGTaGCTGAAAGTGCCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: AILGRGADKMVYRRNRSINCALG*LKVPEL
Trigger: CAGCTCTGGCACTTTCAGGCACCCCAGAGCACAATT...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAAGGTCCCACTGCAGCTaGATAATGTCCCCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTRSHCS*IMSPQW
Trigger: CCACTGAGGGGACATTATGCAGCTGCAGTGGGACCT...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACTGCTGTACTGTTGCTaGGGCTCACTTCCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTLLYCC*GSLPVG
Trigger: ACCCACAGGAAGTGAGCCCCAGCAACAGTACAGCAG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTATACACATGTGCCACTaGATCCTGAGCTGCCATTGT +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALIHMCH*ILSCHC
Trigger: ACAATGGCAGCTCAGGATCCAGTGGCACATGTGTAT...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCATCTGTGGTGTCTGTaGTGGGAGGGGCTTCCATAT +
Preference number: 2 (lower is better)
Translates to: AILGRGADKMVYRRNRSIHLWCL*WEGLPY
Trigger: ATATGGAAGCCCCTCCCACCACAGACACCACAGATG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp GAATTGAACAAACTGTCTAAGCTGGGTCAGGTACTCTGCAGATGTTaGCTGAGTATCGTTCTTGATGGAAATCCCCGTGGAACTCCTACA +
Preference number: 2 (lower is better)
Translates to: ELNKLSKLGQVLCRC*LSIVLDGNPRGTPT
Trigger: TGTAGGAGTTCCACGGGGATTTCCATCAAGAACGATACTCAGCAAACATCTGCAGAGTACCTGACCCAGCTTAGACAGTTTGTTCAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTCCACTATCCTTTCAATaGAGCCTGGGTATCTGGCCT +
Preference number: 2 (lower is better)
Translates to: SLAWFMATFPDYLAAILGPLSFQ*SLGIWP
Trigger: AGGCCAGATACCCAGGCTTCATTGAAAGGATAGTGG...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGCCACAGTCATATGGTaGGGGCCTCTTGGAGTTCAT +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTATVIW*GPLGVH
Trigger: ATGAACTCCAAGAGGCCCTCACCATATGACTGTGGC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTATGCTGGCTTCTGTGTaGAACCTGAATACATGCAAA +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSMLASV*NLNTCK
Trigger: TTTGCATGTATTCAGGTTTCACACAGAAGCCAGCAT...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCTGGCTGTCTGGCTGTaGTTTCCAGACAGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: AILGRGADKMVYRRNRSILAVWL*FPDSVY
Trigger: ATACACACTGTCTGGAAAGCACAGCCAGACAGCCAG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGATAATTGTGACATCTTaGAATTGTGGAGGACTTTAC +
Preference number: 2 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQIIVTS*NCGGLY
Trigger: GTAAAGTCCTCCACAATTGCAAGATGTCACAATTAT...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCCCAATAGGCTGTGCATaGAGAAGACAAATCCTCTTG +
Preference number: 2 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRPIGCA*RRQILL
Trigger: CAAGAGGATTTGTCTTCTCCATGCACAGCCTATTGG...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTGCAAGTCTCTTATCTaGGGGTCTGGCTTGGTAAAT +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALCKSLI*GSGLVN
Trigger: ATTTACCAAGCCAGACCCCCAGATAAGAGACTTGCA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACATCACTAGCACTACCTTaGTCCACCCTGCCATCTGCT +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTSLALP*STLPSA
Trigger: AGCAGATGGCAGGGTGGACCAAGGTAGTGCTAGTGA...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp GGGGGAAATGCCACAGTCCGCAAGTTGGTGCTATGTTTCATCTCATaGCATAATACTACACCATTCTCTGTGTGTAGTGGCTGTTCTATA +
Preference number: 2 (lower is better)
Translates to: GGNATVRKLVLCFIS*HNTTPFSVCSGCSI
Trigger: TATAGAACAGCCACTACACACAGAGAATGGTGTAGTATTATGCAATGAGATGAAACATAGCACCAACTTGCGGACTGTGGCATTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGCAGGATTCTAAATGCTaGGGAGGTAATTCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRQDSKC*GGNSEP
Trigger: TGGCTCTGAATTACCTCCTCAGCATTTAGAATCCTG...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAAGCTCTTTCTTGGCCTaGGGTTCAGAAGAACCTGCA +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTSSFLA*GSEEPA
Trigger: TGCAGGTTCTTCTGAACCTCAGGCCAAGAAAGAGCT...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTGGTCCCATATCCTCATaGAATGCCTCTTATAATTGT +
Preference number: 2 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSGPISS*NASYNC
Trigger: ACAATTATAAGAGGCATTTCATGAGGATATGGGACC...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTAAGCCAGTATTATTTTaGACCTCTGTTAGAGTGGCT +
Preference number: 2 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPKPVLF*TSVRVA
Trigger: AGCCACTCTAACAGAGGTTCAAAATAATACTGGCTT...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCTGTTCCACGCACATTTaGCAGGGAGAGAGATTTCAC +
Preference number: 2 (lower is better)
Translates to: SEITQNSWRVTEISGKLSCSTHI*QGERFH
Trigger: GTGAAATCTCTCTCCCTGGCAAATGTGCGTGGAACA...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTTCCTCACTGTCTAGATaGCTCTATCATGGGGATCTC +
Preference number: 2 (lower is better)
Translates to: SLAWFMATFPDYLAAILGSSLSR*LYHGDL
Trigger: GAGATCCCCATGATAGAGGCATCTAGACAGTGAGGA...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTCTGACATTTGCAAGATaGCTTCTTTTGGGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: QKANSSEGWQAAFYSSLILTFAR*LLLGSW
Trigger: CCAGGAACCCAAAAGAAGCCATCTTGCAAATGTCAG...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACTTGTGGCTGCCTATTaGACTGTGCAGTTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTLVAAY*TVQFWR
Trigger: TCTCCAGAACTGCACAGTCCAATAGGCAGCCACAAG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp ACCACTGCAATTTCCAAATCTGGGGGAAATGCCACAGTCCGCAAGTaGGTGCTATGTTTCATCTCATTGCATAATACTACACCATTCTCT +
Preference number: 2 (lower is better)
Translates to: TTAISKSGGNATVRK*VLCFISLHNTTPFS
Trigger: AGAGAATGGTGTAGTATTATGCAATGAGATGAAACATAGCACCAACTTGCGGACTGTGGCATTTCCCCCAGATTTGGAAATTGCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 90 bp ATCCTGGGTCAATTTAGCAGCTATTTTCCAGGGTTTGGCTTGGGTTaGGATGCTGGCTTCTGTGTGAAACCTGAATACATGCAAATTGTA +
Preference number: 2 (lower is better)
Translates to: ILGQFSSYFPGFGLG*DAGFCVKPEYMQIV
Trigger: TACAATTTGCATGTATTCAGGTTTCACACAGAAGCCAGCATCCAAACCCAAGCCAAACCCTGGAAAATAGCTGCTAAATTGACCCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGTGCCCTCATCATATATaGGAAAAATGGGCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRCPHHI*EKWAER
Trigger: TCTCTCTGCCCATTTTTCTCATATATGATGAGGGCA...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACACAAAATGAGAGCCTaGGATTGCCTAAGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTHKMRA*DCLSLL
Trigger: CAGAAGGCTTAGGCAATCTCAGGCTCTCATTTTGTG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCATATACATATATGCATaGTGCTGTGCAAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRIYIYA*CCANAQ
Trigger: CTGGGCATTTGCACAGCATCATGCATATATGTATAT...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGAAGTAGCTGCCCTGTaGTCTGTGCTAAATGGACTA +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTEVAAL*SVLNGL
Trigger: TAGTCCATTTAGCACAGAGCACAGGGCAGCTACTTC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCCACAGTCCGCAAGTTaGTGCTATGTTTCATCTCAT +
Preference number: 2 (lower is better)
Translates to: AILGRGADKMVYRRNRSIPQSAS*CYVSSH
Trigger: ATGAGATGAAACATAGCACCAACTTGCGGACTGTGG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTATTACCCAAAATAGCTaGAGAGTCACTGAGATCTCA +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALITQNS*RVTEIS
Trigger: TGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAAT...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCGGTAACACCTCTAATTaGATGCCTTTTAATCGTTCC +
Preference number: 2 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRGNTSN*MPFNRS
Trigger: GGAACGATTAAAAGGCATCCAATTAGAGGTGTTACC...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGTCACTCAGTGGCACTTaGCACTTATTCCTTCTTGAA +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRSLSGT*HLFLLE
Trigger: TTCAAGAAGGAATAAGTGCCAAGTGCCACTGAGTGA...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGAATAGATGTATTGTTTaGGAAACCCTGCAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRNRCIV*ETLQAC
Trigger: ACAAGCCTGCAGGGTTTCTCAAACAATACATCTATT...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTTTTCTCCCATATCTCTaGCCCTCTTTCCTTAGTCTT +
Preference number: 2 (lower is better)
Translates to: SLAWFMATFPDYLAAILGFLPYL*PSFLSL
Trigger: AAGACTAAGGAAAGAGGGTCAGAGATATGGGAGAAA...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCAAGTTATTTCCTGTTaGCTAGGTAACACCTCTAAT +
Preference number: 2 (lower is better)
Translates to: ASVLRIRRKVFALFYKALQVISC*LGNTSN
Trigger: ATTAGAGGTGTTACCTAGGCAACAGGAAATAACTTG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTTGGACTGTGCAGTTCTaGAGAATGGTACTTTACTTG +
Preference number: 2 (lower is better)
Translates to: AILGRGADKMVYRRNRSIWTVQF*RMVLYL
Trigger: CAAGTAAAGTACCATTCTCCAGAACTGCACAGTCCA...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACATTAAATAGCTGTGTGTaGCTTGTGGCTGCCTATTGG +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTLNSCV*LVAAYW
Trigger: CCAATAGGCAGCCACAAGCCACACACAGCTATTTAA...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR GCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTACACCTCTAATTGGATaGCTTTTAATCGTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: QKANSSEGWQAAFYSSLITPLIG*LLIVPF
Trigger: AAAGGGAACGATTAAAAGGCATCCAATTAGAGGTGT...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAACATTTCCCTCAAAATaGAGCAGGAAGCTCTCAAAA +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTTFPSK*SRKLSK
Trigger: TTTTGAGAGCTTCCTGCTCCATTTTGAGGGAAATGT...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACTTCTGTGTGAAACCTaGATACATGCAAATTGTACA +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTLLCET*IHANCT
Trigger: TGTACAATTTGCATGTATTCAGGTTTCACACAGAAG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR TCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACATCTTGTTTTATCATTTaGTGTCATGAAAGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTSCFII*CHESPC
Trigger: GCAGGGACTTTCATGACATCAAATGATAAAACAAGA...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp ATGCCTGGTGGACAGGGAGCCCTCAGCAGGCCGTACTaGAGCGCCCTGCCCCCGTCAGCCTCCAGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: MPGGQGALSRPY*SALPPSASRSL
Trigger: CAGGCTCCTGGAGGCTGACGGGGGCAGGGCGCTGCAGTACGGCCTGCTGAGGGCTCCCTGTCCACCAGGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp ACTGCAGCGCCCTGCCCCCGTCAGCCTCCAGGAGCCTaGAGTCCAGGGACATCAAGGGCGGTCCTGTCTTTC +
Preference number: 3 (lower is better)
Translates to: TAAPCPRQPPGA*SPGTSRAVLSF
Trigger: GAAAGACAGGACCGCCCTTGATGTCCCTGGACTCCAGGCTCCTGGAGGCTGACGGGGGCAGGGCGCTGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CCCAGGCTGGGTGGCTGCCTCTCTTTGGTGTGCCCATaGCAGCCCAGAATGCCTGGTGGACAGGGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: PRLGGCLSLVCP*QPRMPGGQGAL
Trigger: GAGGGCTCCCTGTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CCCTCACCCCAGAGTCCACAGGAAGAGGGGGTCTGCTaGGAGGCCTGTCTGAAGGACGGAGGATCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: PSPQSPQEEGVC*EACLKDGGSWV
Trigger: GACCCAGGATCCTCCGTCCTTCAGACAGGCCTCCCAGCAGACCCCCTCTTCCTGTGGACTCTGGGGTGAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GTCAGAGGGCCCTGCCCTAGAGAACACGTGCGCCCCTaGGTGGGCAATCCCTTCACTGTGACCGCAACCATG +
Preference number: 3 (lower is better)
Translates to: VRGPCPREHVRP*VGNPFTVTATM
Trigger: CATGGTTGCGGTCACAGTGAAGGGATTGCCCACGCAGGGGCGCACGTGTTCTCTAGGGCAGGGCCCTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GCTGCCTCTCTTTGGTGTGCCCATGGCAGCCCAGAATaGCTGGTGGACAGGGAGCCCTCAGCAGGCCGTACT +
Preference number: 3 (lower is better)
Translates to: AASLWCAHGSPE*LVDREPSAGRT
Trigger: AGTACGGCCTGCTGAGGGCTCCCTGTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp TGCCTACCCAGGCTGGGTGGCTGCCTCTCTTTGGTGTaGCCATGGCAGCCCAGAATGCCTGGTGGACAGGGA +
Preference number: 3 (lower is better)
Translates to: CLPRLGGCLSLV*PWQPRMPGGQG
Trigger: TCCCTGTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CCTCTCTTTGGTGTGCCCATGGCAGCCCAGAATGCCTaGTGGACAGGGAGCCCTCAGCAGGCCGTACTGCAG +
Preference number: 3 (lower is better)
Translates to: PLFGVPMAAQNA*WTGSPQQAVLQ
Trigger: CTGCAGTACGGCCTGCTGAGGGCTCCCTGTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp AACCCTCCTCGCTGCGGTATGCCCTGGGTGTGGGCCTaGGGGGCCACGTTTTCTCTCCCTGAAGGAGAATCT +
Preference number: 3 (lower is better)
Translates to: NPPRCGMPWVWA*GATFSLPEGES
Trigger: AGATTCTCCTTCAGGGAGAGAAAACGTGGCCCCCCAGGCCCACACCCAGGGCATACCGCAGCGAGGAGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp TTCTCTGCCTACCCAGGCTGGGTGGCTGCCTCTCTTTaGTGTGCCCATGGCAGCCCAGAATGCCTGGTGGAC +
Preference number: 3 (lower is better)
Translates to: FSAYPGWVAASL*CAHGSPECLVD
Trigger: GTCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp GATGGCAGAGCGGGAAGGAGGAGCCAGCCTTACCGATaGCATCACTGTCACTGCGCTAGCCCCAGACCACCT +
Preference number: 3 (lower is better)
Translates to: DGRAGRRSQPYR*HHCHCASPRPP
Trigger: AGGTGGTCTGGGGCTAGCGCAGTGACAGTGATGCCATCGGTAAGGCTGGCTCCTCCTTCCCGCTCTGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GCCTGGGCCACTCTTCCTGCTCCTTGTCAGCAGGCTTaGTGCTCTCAGGCTCAGCATGGACAGCTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: AWATLPAPCQQA*CSQAQHGQLLL
Trigger: CAGAAGCAGCTGTCCATGCTGAGCCTGAGAGCAGCAAGCCTGCTGACAAGGAGCAGGAAGAGTGGCCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp AGGAGGAGCCAGCCTTACCGATGGCATCACTGTCACTaGGCTAGCCCCAGACCACCTGCTCCAGAGTTCTGG +
Preference number: 3 (lower is better)
Translates to: RRSQPYRWHHCH*ASPRPPAPEFW
Trigger: CCAGAACTCTGGAGCAGGTGGTCTGGGGCTAGCGCAGTGACAGTGATGCCATCGGTAAGGCTGGCTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp GGGTTCCCAGGCTCAGTGGTGGCACCACTGTCTACCTaGCTGCTTAGCCTGAGACCTGGCTCCGTCCCAATT +
Preference number: 3 (lower is better)
Translates to: GFPGSVVAPLST*LLSLRPGSVPI
Trigger: AATTGGGACGGAGCCAGGTCTCAGGCTAAGCAGCCAGGTAGACAGTGGTGCCACCACTGAGCCTGGGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp CTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCTaGGCCCTTTGGCCTGAGATGAAGGATGATGGTGTG +
Preference number: 3 (lower is better)
Translates to: LLQGSSPCRLGR*ALWPEMKDDGV
Trigger: CACACCATCATCCTTCATCTCAGGCCAAAGGGCTCAGCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp ACAGAGCAGCCTAGTGCTTGGCATGGGACTCAGATCTaGAGCAGCCTCTCCGGGACTTCTCTGAGCCTGCCC +
Preference number: 3 (lower is better)
Translates to: TEQPSAWHGTQI*SSLSGTSLSLP
Trigger: GGGCAGGCTCAGAGAAGTCCCGGAGAGGCTGCTTCAGATCTGAGTCCCATGCCAAGCACTAGGCTGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GGGTATCTGGCCTTCCTCCAGGTCAGGGACCCCCTATaGTGCAGAAGGCAAGTCTGGGAGAATCTGTCCCTC +
Preference number: 3 (lower is better)
Translates to: GYLAFLQVRDPL*CRRQVWENLSL
Trigger: GAGGGACAGATTCTCCCAGACTTGCCTTCTGCAGCATAGGGGGTCCCTGACCTGGAGGAAGGCCAGATACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp GCCCCAGCGCCTCTTCTGGACTCAGATGCCCTAGGCTaGCTGTCTGGCTGTGCTTTCCAGACAGTGTGTATG +
Preference number: 3 (lower is better)
Translates to: APAPLLDSDALG*LSGCAFQTVCM
Trigger: CATACACACTGTCTGGAAAGCACAGCCAGACAGCCAGCCTAGGGCATCTGAGTCCAGAAGAGGCGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAGCAAGATGGCTTCTTTaGGGTTCCTGGTGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAARWLL*GSWCCR
Trigger: CCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGC...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp TGGGCCACTCTTCCTGCTCCTTGTCAGCAGGCTTGCTaGTCTCAGGCTCAGCATGGACAGCTGCTTCTGAGA +
Preference number: 3 (lower is better)
Translates to: WATLPAPCQQAC*SQAQHGQLLLR
Trigger: TCTCAGAAGCAGCTGTCCATGCTGAGCCTGAGAGCAGCAAGCCTGCTGACAAGGAGCAGGAAGAGTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp CCTGCAGAACTACACACAGTTCCCCCAACAAGGCCCTaGTCTGTTCTTCCCACACACTGCTCCTCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: PAELHTVPPTRP*SVLPTHCSSAW
Trigger: CCAGGCAGAGGAGCAGTGTGTGGGAAGAACAGAGCAGGGCCTTGTTGGGGGAACTGTGTGTAGTTCTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATaGCTCCAGCTGGAGGCGGTGAGGCGGTGCTTTTCT +
Preference number: 3 (lower is better)
Translates to: PRTFARERDFTA*LQLEAVRRCFS
Trigger: AGAAAAGCACCGCCTCACCGCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CTGGCTGGAGGTGGCCTGCTGTGTGCAGATGGTACCTaGTGCAGGATTGTGGTGTCCAGGTGTCTCTCCTTA +
Preference number: 3 (lower is better)
Translates to: LAGGGLLCADGT*CRIVVSRCLSL
Trigger: TAAGGAGAGACACCTGGACACCACAATCCTGCACCAGGTACCATCTGCACACAGCAGGCCACCTCCAGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAGACTCACAAGGCCAATaGCTTGGTGGGAACCCCTCC +
Preference number: 3 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLDSQGQ*LGGNPS
Trigger: GGAGGGGTTCCCACCAAGCAATTGGCCTTGTGAGTC...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp CTGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTaGCCACCTGGCTTTAGCAAGCTAGGACACCCAGGG +
Preference number: 3 (lower is better)
Translates to: LEALLHSEDTKA*PPGFSKLGHPG
Trigger: CCCTGGGTGTCCTAGCTTGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp AATTCCAGGACTGGCCTGAGTTGCTCCTTAGACCAATaGAATCAGACTCCTGGGAGTACGGCCCGGGCCTCG +
Preference number: 3 (lower is better)
Translates to: NSRTGLSCSLDQ*NQTPGSTARAS
Trigger: CGAGGCCCGGGCCGTACTCCCAGGAGTCTGATTTCATTGGTCTAAGGAGCAACTCAGGCCAGTCCTGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp CTGACATTTGCAAGATGGCTTCTTTTGGGTTCCTGGTaGTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCA +
Preference number: 3 (lower is better)
Translates to: LTFARWLLLGSW*CRPWFPRTQLA
Trigger: TGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGCAAATGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp ATGTGGATTTTATTTCCAGGTCCTGTCAGAGGGCCCTaGCCTAGAGAACACGTGCGCCCCTGCGTGGGCAAT +
Preference number: 3 (lower is better)
Translates to: MWILFPGPVRGP*PREHVRPCVGN
Trigger: ATTGCCCACGCAGGGGCGCACGTGTTCTCTAGGGCAGGGCCCTCTGACAGGACCTGGAAATAAAATCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp ACTTCATCCCCAGCTGACACTGTGGGAAGGACCCCATaGAGAAGCAATAGGGCAGCCTGGTCCCATATCCTC +
Preference number: 3 (lower is better)
Translates to: TSSPADTVGRTP*RSNRAAWSHIL
Trigger: GAGGATATGGGACCAGGCTGCCCTATTGCTTCTGCATGGGGTCCTTCCCACAGTGTCAGCTGGGGATGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp GCCTGGCCAAGCTGCCCAGGAGGTCCCTTGGTGCCCTaGGCTCTGTTTCACTGTTGTTTTGTAGAGCAACTT +
Preference number: 3 (lower is better)
Translates to: AWPSCPGGPLVP*ALFHCCFVEQL
Trigger: AAGTTGCTCTACAAAACAACAGTGAAACAGAGCCCAGGGCACCAAGGGACCTCCTGGGCAGCTTGGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp AGGCCTCTCCGCCACGGCAGCCTAGCTAATGGGTCTTaGCTGGAAGCTAACAGGAAGGCCTCTTTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: RPLRHGSLANGS*LEANRKASFQK
Trigger: TTTCTGGAAAGAGGCCTTCCTGTTAGCTTCCAGCCAAGACCCATTAGCTAGGCTGCCGTGGCGGAGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAGCCACAGTCCGCAAGTaGGTGCTATGTTTCATCTCA +
Preference number: 3 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAATVRK*VLCFIS
Trigger: TGAGATGAAACATAGCACCAACTTGCGGACTGTGGC...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp TACCAGTGGTGTGCAAACTGGAGACCCCCAAGACAGTaGGAGAGGCCACAGCATCTGAGGGAATGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: YQWCANWRPPRQ*ERPQHLREWSS
Trigger: AGAGCTCCATTCCCTCAGATGCTGTGGCCTCTCTCACTGTCTTGGGGGTCTCCAGTTTGCACACCACTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp GTCCCTGCTGTAGATAAAAGATGGAGCTTGTGCTTCTaGGTGGTCATGCTCAACAGGGTGGGGAGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: VPAVDKRWSLCF*VVMLNRVGSPG
Trigger: CCCTGGGCTCCCCACCCTGTTGAGCATGACCACTCAGAAGCACAAGCTCCATCTTTTATCTACAGCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp ACGATTCTGTGTAGTCCTGCACGCTGGGCGGGGGATTaGCTGGAGGTTTCTTTAGACCTGTCTAGCTCACAC +
Preference number: 3 (lower is better)
Translates to: TILCSPARWAGD*LEVSLDLSSSH
Trigger: GTGTGAGCTAGACAGGTCTAAAGAAACCTCCAGGCAATCCCCCGCCCAGCGTGCAGGACTACACAGAATCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp TGGTCCACCCTGCCATCTGCTTTCCTCCTCCACTCCTaGATTCTGAGTCATTTTCGGCAGCACACGCATCCT +
Preference number: 3 (lower is better)
Translates to: WSTLPSAFLLHS*ILSHFRQHTHP
Trigger: AGGATGCGTGTGCTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GCACATAAGACCCTGTCCGAGGACTGTGGCATGACGTaGTGGAGTCACGATTCTGTCACCCAGTCAGGTCAT +
Preference number: 3 (lower is better)
Translates to: AHKTLSEDCGMT*WSHDSVTQSGH
Trigger: ATGACCTGACTGGGTGACAGAATCGTGACTCCAGCACGTCATGCCACAGTCCTCGGACAGGGTCTTATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp TTTACACCCCCAGACCACTATCCTTTCAATGAAGCCTaGGTATCTGGCCTTCCTCCAGGTCAGGGACCCCCT +
Preference number: 3 (lower is better)
Translates to: FTPPDHYPFNEA*VSGLPPGQGPP
Trigger: AGGGGGTCCCTGACCTGGAGGAAGGCCAGATACCCAGGCTTCATTGAAAGGATAGTGGTCTGGGGGTGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp TTTTTCTTCTCTGGAGGTGGGTCCTGGTTCCTCCCATaGAGACCACGATTCTGTGTAGTCCTGCACGCTGGG +
Preference number: 3 (lower is better)
Translates to: FFFSGGGSWFLP*RPRFCVVLHAG
Trigger: CCCAGCGTGCAGGACTACACAGAATCGTGGTCTCCATGGGAGGAACCAGGACCCACCTCCAGAGAAGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp TCTCTCCACGTCTCTGTGTTCTCACTAGCACTACCTTaGTCCACCCTGCCATCTGCTTTCCTCCTCCACTCC +
Preference number: 3 (lower is better)
Translates to: SLHVSVFSLALP*STLPSAFLLHS
Trigger: GGAGTGGAGGAGGAAAGCAGATGGCAGGGTGGACCAAGGTAGTGCTAGTGAGAACACAGAGACGTGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp GAAGACAAGGCCACTTGGAGGCAGAGGAGACCACAGTaGGGCATGATGGTTGGGGAAGGCCTTTTACTTCTG +
Preference number: 3 (lower is better)
Translates to: EDKATWRQRRPQ*GMMVGEGLLLL
Trigger: CAGAAGTAAAAGGCCTTCCCCAACCATCATGCCCCACTGTGGTCTCCTCTGCCTCCAAGTGGCCTTGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp AACATGGATGTGAGCCTTGGAGGGGTAGCTACCATCTaGCACCTGGGGTGGCAAGCCAACATGGAAAGGATG +
Preference number: 3 (lower is better)
Translates to: NMDVSLGGVATI*HLGWQANMERM
Trigger: CATCCTTTCCATGTTGGCTTGCCACCCCAGGTGCCAGATGGTAGCTACCCCTCCAAGGCTCACATCCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CATAAGACCCTGTCCGAGGACTGTGGCATGACGTGCTaGAGTCACGATTCTGTCACCCAGTCAGGTCATCAG +
Preference number: 3 (lower is better)
Translates to: HKTLSEDCGMTC*SHDSVTQSGHQ
Trigger: CTGATGACCTGACTGGGTGACAGAATCGTGACTCCAGCACGTCATGCCACAGTCCTCGGACAGGGTCTTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTATTTCCAGGGTTTGGCTaGGGTTTGGATGCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLFPGFG*GLDAGF
Trigger: GAAGCCAGCATCCAAACCCAAGCCAAACCCTGGAAA...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCAGGGTTTCGACATGTaGCCTAGGCTGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQQGFDM*PRLVSN
Trigger: GTTCGAGACCAGCCTAGGCAACATGTCGAAACCCTG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp GTGTTCGTTTACACCCCCAGACCACTATCCTTTCAATaGAGCCTGGGTATCTGGCCTTCCTCCAGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: VFVYTPRPLSFQ*SLGIWPSSRSG
Trigger: CCCTGACCTGGAGGAAGGCCAGATACCCAGGCTTCATTGAAAGGATAGTGGTCTGGGGGTGTAAACGAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp AGATGCCCACAGTGCATGACGTTACCCGCACAGGTGTaGCATCACAGGGTAACCAAATGCTTTTGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: RCPQCMTLPAQV*HHRVTKCFCPG
Trigger: CCCAGGGCAAAAGCATTTGGTTACCCTGTGATGTCACACCTGTGCGGGTAACGTCATGCACTGTGGGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp CATACTACCCTCATTGTCACCCCTCAGAGGTCCCACTaGAGCTGCATAATGTCCCCTCAGTGGCCTGAACAT +
Preference number: 3 (lower is better)
Translates to: HTTLIVTPQRSH*SCIMSPQWPEH
Trigger: ATGTTCAGGCCACTGAGGGGACATTATGCAGCTGCAGTGGGACCTCTGAGGGGTGACAATGAGGGTAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp TGGAAAAGGAAACTTCGTGGGGGAAAGAGATCTGCTTaGAGTCGGCCAGAGAGACAGAACCAGGGCAGTGGT +
Preference number: 3 (lower is better)
Translates to: WKRKLRGGKRSA*SRPERQNQGSG
Trigger: ACCACTGCCCTGGTTCTGTCTCTCTGGCCGACTGCAAGCAGATCTCTTTCCCCCACGAAGTTTCCTTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GACATGGAAAAGGAAACTTCGTGGGGGAAAGAGATCTaGTTGCAGTCGGCCAGAGAGACAGAACCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: DMEKETSWGKEI*LQSARETEPGQ
Trigger: CTGCCCTGGTTCTGTCTCTCTGGCCGACTGCAAGCAGATCTCTTTCCCCCACGAAGTTTCCTTTTCCATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGTaGCCACAGTCATATGGTGAGGGCCTCTTGGAGTTC +
Preference number: 3 (lower is better)
Translates to: LRRLLAKTLDSL*PQSYGEGLLEF
Trigger: GAACTCCAAGAGGCCCTCACCATATGACTGTGGCCACAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp GTCTGCTGGGAGGCCTGTCTGAAGGACGGAGGATCCTaGGTCAATTTAGCAGCTATTTTCCAGGGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: VCWEACLKDGGS*VNLAAIFQGLA
Trigger: AGCCAAACCCTGGAAAATAGCTGCTAAATTGACCCAGGATCCTCCGTCCTTCAGACAGGCCTCCCAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp GCCTCTTCTGGACTCAGATGCCCTAGGCTGGCTGTCTaGCTGTGCTTTCCAGACAGTGTGTATGTGGAATTG +
Preference number: 3 (lower is better)
Translates to: ASSGLRCPRLAV*LCFPDSVYVEL
Trigger: CAATTCCACATACACACTGTCTGGAAAGCACAGCCAGACAGCCAGCCTAGGGCATCTGAGTCCAGAAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp AATCTGCTGGAAGAACTTCATCCCCAGCTGACACTGTaGGAAGGACCCCATGCAGAAGCAATAGGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: NLLEELHPQLTL*EGPHAEAIGQP
Trigger: AGGCTGCCCTATTGCTTCTGCATGGGGTCCTTCCCACAGTGTCAGCTGGGGATGAAGTTCTTCCAGCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACTGAAAAGAAGGGGTTaGCAAAGCCAACCCAGGCAA +
Preference number: 3 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLLKRRG*QSQPRQ
Trigger: TTGCCTGGGTTGGCTTTGCAAACCCCTTCTTTTCAG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp AGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCGGTaGGGCGGTGCTTTTCTAAGACTTCCTATCAGAAGC +
Preference number: 3 (lower is better)
Translates to: REISQHGSSWRR*GGAFLRLPIRS
Trigger: GCTTCTGATAGGAAGTCTTAGAAAAGCACCGCCTCACCGCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp CCAGGGCTGTCTGGCATTTTCCACAAAATGAGAGCCTaGGATTGCCTAAGCCTTCTGATGCCTTCTCCAGGC +
Preference number: 3 (lower is better)
Translates to: PGLSGIFHKMRA*DCLSLLMPSPG
Trigger: GCCTGGAGAAGGCATCAGAAGGCTTAGGCAATCTCAGGCTCTCATTTTGTGGAAAATGCCAGACAGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp CCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTaGGTCATTTTCGGCAGCACACGCATCCTTAAAACC +
Preference number: 3 (lower is better)
Translates to: PCHLLSSSTPAF*VIFGSTRILKT
Trigger: GGTTTTAAGGATGCGTGTGCTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTaGCGATCCGAGCCTGGAGATCAGCCAGCTAAAAGC +
Preference number: 3 (lower is better)
Translates to: LVKERTVGGFKI*RSEPGDQPAKS
Trigger: GCTTTTAGCTGGCTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp TTCACAGCATGGCTCCAGCTGGAGGCGGTGAGGCGGTaGTTTTCTAAGACTTCCTATCAGAAGCTGTGCATA +
Preference number: 3 (lower is better)
Translates to: FTAWLQLEAVRR*FSKTSYQKLCI
Trigger: TATGCACAGCTTCTGATAGGAAGTCTTAGAAAAGCACCGCCTCACCGCCTCCAGCTGGAGCCATGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp TCTAGCTCACACAGTCTTGATGCCTGGGTTTTAGGCTaGTGTACTGTTGCTGGGGCTCACTTCCTGTGGGTA +
Preference number: 3 (lower is better)
Translates to: SSSHSLDAWVLG*CTVAGAHFLWV
Trigger: TACCCACAGGAAGTGAGCCCCAGCAACAGTACAGCAGCCTAAAACCCAGGCATCAAGACTGTGTGAGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTACGCTGGGCGGGGGATaGCCTGGAGGTTTCTTTAGA +
Preference number: 3 (lower is better)
Translates to: ASVLRIRRKVFALFYKALTLGGG*PGGFFR
Trigger: TCTAAAGAAACCTCCAGGCAATCCCCCGCCCAGCGT...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCGATCCTGAGCTGCCATaGTACCTTGGAGGACTGGCG +
Preference number: 3 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRDPELP*YLGGLA
Trigger: CGCCAGTCCTCCAAGGTACAATGGCAGCTCAGGATC...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp CCACAGCATCTGAGGGAATGGAGCTCTTTCTTGGCCTaGGGTTCAGAAGAACCTGCACCAAAGAAAGGCATC +
Preference number: 3 (lower is better)
Translates to: PQHLREWSSFLA*GSEEPAPKKGI
Trigger: GATGCCTTTCTTTGGTGCAGGTTCTTCTGAACCTCAGGCCAAGAAAGAGCTCCATTCCCTCAGATGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp TGGGAACCCCTCCCCCATGGTTATCTCATGGGTCCCTaGAGTCCAACTTCTCCTTCATTGAACTCATCACCT +
Preference number: 3 (lower is better)
Translates to: WEPLPHGYLMGP*SPTSPSLNSSP
Trigger: AGGTGATGAGTTCAATGAAGGAGAAGTTGGACTTCAGGGACCCATGAGATAACCATGGGGGAGGGGTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GTGCATGTTTGTGTGTGTGTGTGTTCCACGCACATTTaGCAGGGAGAGAGATTTCACAGCATGGCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: VHVCVCVCSTHI*QGERFHSMAPA
Trigger: AGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGAACACACACACACACAAACATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp TCTGGACTCAGATGCCCTAGGCTGGCTGTCTGGCTGTaGTTTCCAGACAGTGTGTATGTGGAATTGTGCTTT +
Preference number: 3 (lower is better)
Translates to: SGLRCPRLAVWL*FPDSVYVELCF
Trigger: AAAGCACAATTCCACATACACACTGTCTGGAAAGCACAGCCAGACAGCCAGCCTAGGGCATCTGAGTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GTTCTCACTAGCACTACCTTGGTCCACCCTGCCATCTaGTTTCCTCCTCCACTCCTGCATTCTGAGTCATTT +
Preference number: 3 (lower is better)
Translates to: VLTSTTLVHPAI*FPPPLLHSESF
Trigger: AAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGTGGACCAAGGTAGTGCTAGTGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp TCTTTAGACCTGTCTAGCTCACACAGTCTTGATGCCTaGGTTTTAGGCTGCTGTACTGTTGCTGGGGCTCAC +
Preference number: 3 (lower is better)
Translates to: SLDLSSSHSLDA*VLGCCTVAGAH
Trigger: GTGAGCCCCAGCAACAGTACAGCAGCCTAAAACCCAGGCATCAAGACTGTGTGAGCTAGACAGGTCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp AAGTCTTTGCTTTGTTTTACAAGGCCCTTCGCTATCTaGCCCCCTCATTACCTCCCTTGCTCTGCATGCTCC +
Preference number: 3 (lower is better)
Translates to: KSLLCFTRPFAI*PPHYLPCSACS
Trigger: GGAGCATGCAGAGCAAGGGAGGTAATGAGGGGGCCAGATAGCGAAGGGCCTTGTAAAACAAAGCAAAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp GGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTaGCCAGTCCTTAGTGGAGGACATTTCTTTCCATCC +
Preference number: 3 (lower is better)
Translates to: GMCVEAAPSAGT*PVLSGGHFFPS
Trigger: GGATGGAAAGAAATGTCCTCCACTAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp GGGAAGGCCTTTTACTTCTGCCCCTTAAGGATGCCCTaGAATTCAGGCTTTCGGATCCCAGAGCTCTCATTA +
Preference number: 3 (lower is better)
Translates to: GKAFYFCPLRMP*NSGFRIPELSL
Trigger: TAATGAGAGCTCTGGGATCCGAAAGCCTGAATTCCAGGGCATCCTTAAGGGGCAGAAGTAAAAGGCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCCATATGCTTTGGGGTaGCCGGCTGCTTCTGTGCAT +
Preference number: 3 (lower is better)
Translates to: ASVLRIRRKVFALFYKALPYALG*PAASVH
Trigger: ATGCACAGAAGCAGCCGGCAACCCCAAAGCATATGG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCGAAAAGTCTTTGCTTaGTTTTACAAGGCCCTTCGC +
Preference number: 3 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQRKVFA*FYKALR
Trigger: GCGAAGGGCCTTGTAAAACAAAGCAAAGACTTTTCG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp CCTGCTGCCAGAGCATGGCAGAGTAAATGTGTGAGTTaGAGGGAGCAACCTCATGAGGTTTTGCTTTGTGTC +
Preference number: 3 (lower is better)
Translates to: PAARAWQSKCVS*REQPHEVLLCV
Trigger: GACACAAAGCAAAACCTCATGAGGTTGCTCCCTTCAACTCACACATTTACTCTGCCATGCTCTGGCAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp GTTCCCCTGCTGCCAGAGCATGGCAGAGTAAATGTGTaGGTTGAAGGGAGCAACCTCATGAGGTTTTGCTTT +
Preference number: 3 (lower is better)
Translates to: VPLLPEHGRVNV*VEGSNLMRFCF
Trigger: AAAGCAAAACCTCATGAGGTTGCTCCCTTCAACTCACACATTTACTCTGCCATGCTCTGGCAGCAGGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GGCTTTCGGATCCCAGAGCTCTCATTAGAGCAGCCCTaGGTTGTAGACTTTTCTGCAGTGACAGAAATGTTC +
Preference number: 3 (lower is better)
Translates to: GFRIPELSLEQP*VVDFSAVTEMF
Trigger: GAACATTTCTGTCACTGCAGAAAAGTCTACAACGCAGGGCTGCTCTAATGAGAGCTCTGGGATCCGAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp AGATGCCTCTATCATGGGGATCTCTTCTTCCCTCTCTaGATGGCTCTGATCCCCAAGTTATTTCCTGTTGCC +
Preference number: 3 (lower is better)
Translates to: RCLYHGDLFFPL*MALIPKLFPVA
Trigger: GGCAACAGGAAATAACTTGGGGATCAGAGCCATCCAGAGAGGGAAGAAGAGATCCCCATGATAGAGGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp ATTGTTATGAGCTCTAGACTCACAAGGCCAATTGCTTaGTGGGAACCCCTCCCCCATGGTTATCTCATGGGT +
Preference number: 3 (lower is better)
Translates to: IVMSSRLTRPIA*WEPLPHGYLMG
Trigger: ACCCATGAGATAACCATGGGGGAGGGGTTCCCACCAAGCAATTGGCCTTGTGAGTCTAGAGCTCATAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCTCTGGCACCTGTCCTaGCCCTCATCATATATGAGA +
Preference number: 3 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPLWHLS*PSSYMR
Trigger: TCTCATATATGATGAGGGCAAGGACAGGTGCCAGAG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCAGGACTGGCCTGAGTaGCTCCTTAGACCAATGAAA +
Preference number: 3 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPQDWPE*LLRPMK
Trigger: TTTCATTGGTCTAAGGAGCAACTCAGGCCAGTCCTG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp TGTCTAAGCTGGGTCAGGTACTCTGCAGATGTTTGCTaGGTATCGTTCTTGATGGAAATCCCCGTGGAACTC +
Preference number: 3 (lower is better)
Translates to: CLSWVRYSADVC*VSFLMEIPVEL
Trigger: GAGTTCCACGGGGATTTCCATCAAGAACGATACTCAGCAAACATCTGCAGAGTACCTGACCCAGCTTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp ATGATGTGCCCTTGTACACCCACTGCCTCTGAACTCTaGTCTGCATTGCTGAGCAAACTACATTTCCCAGAA +
Preference number: 3 (lower is better)
Translates to: MMCPCTPTASEL*SALLSKLHFPE
Trigger: TTCTGGGAAATGTAGTTTGCTCAGCAATGCAGAGCAGAGTTCAGAGGCAGTGGGTGTACAAGGGCACATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp ACTTCACAATGGCTAAAGTGTGCTAATGGGATGATGTaGCCTTGTACACCCACTGCCTCTGAACTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: TSQWLKCANGMM*PCTPTASELCS
Trigger: AGAGCAGAGTTCAGAGGCAGTGGGTGTACAAGGGCACATCATCCCATTAGCACACTTTAGCCATTGTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGTTGCACCATATGCTTaGGGGTTGCCGGCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: AILGRGADKMVYRRNRSIVAPYA*GLPAAS
Trigger: AGAAGCAGCCGGCAACCCCAAAGCATATGGTGCAAC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCGCTATTTTCCAGGGTTaGGCTTGGGTTTGGATGCTG +
Preference number: 3 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRAIFQG*AWVWML
Trigger: CAGCATCCAAACCCAAGCCAAACCCTGGAAAATAGC...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGTTGGGAGTACCAGCCTaGCTTGGTTCATGGCCACTT +
Preference number: 3 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRLGVPA*LGSWPL
Trigger: AAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAA...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGGTGTTCCACGCACATTaGCCAGGGAGAGAGATTTCA +
Preference number: 3 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRVFHAH*PGREIS
Trigger: TGAAATCTCTCTCCCTGGCAAATGTGCGTGGAACAC...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGGGAAAGAGATCTGCTaGCAGTCGGCCAGAGAGACA +
Preference number: 3 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTGKEIC*QSARET
Trigger: TGTCTCTCTGGCCGACTGCAAGCAGATCTCTTTCCC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGGTGGGGTATGTGTGTaGAAGCTGCACCTTCAGCAG +
Preference number: 3 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTGGVCV*KLHLQQ
Trigger: CTGCTGAAGGTGCAGCTTCAACACACATACCCCACC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp CAAGACTCTGGATTCTCTGTGGCCACAGTCATATGGTaGGGGCCTCTTGGAGTTCATTCAAACTTTAAGGGA +
Preference number: 3 (lower is better)
Translates to: QDSGFSVATVIW*GPLGVHSNFKG
Trigger: TCCCTTAAAGTTTGAATGAACTCCAAGAGGCCCTCACCATATGACTGTGGCCACAGAGAATCCAGAGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp AATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTaGCCAGATTCCAGGACTTACAGTGAGAAAGCGCCT +
Preference number: 3 (lower is better)
Translates to: NGPERGQEYNFL*PDSRTYSEKAP
Trigger: AGGCGCTTTCTCACTGTAAGTCCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp TGGCTGTTCTATATATATACATCGGGAGGCAACATATaGCTGTCCCAACCCCCACCTGTCAAAACTGTGACT +
Preference number: 3 (lower is better)
Translates to: WLFYIYTSGGNI*LSQPPPVKTVT
Trigger: AGTCACAGTTTTGACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAACAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCCAGAGCCACGAAAAGTaGCACCATATGCTTTGGGGT +
Preference number: 3 (lower is better)
Translates to: SEITQNSWRVTEISGKLSQSHEK*HHMLWG
Trigger: ACCCCAAAGCATATGGTGCAACTTTTCGTGGCTCTG...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTCAAGCTGCCTCCAATaGCCTCTTTCCAAAACCAAA +
Preference number: 3 (lower is better)
Translates to: ASVLRIRRKVFALFYKALSSCLQ*PLSKTK
Trigger: TTTGGTTTTGGAAAGAGGCAATTGGAGGCAGCTTGA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTCATTCCTTTAGAAGATaGCTCAAGCTGCCTCCAATT +
Preference number: 3 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSHSFRR*LKLPPI
Trigger: AATTGGAGGCAGCTTGAGCAATCTTCTAAAGGAATG...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTTTAGGCGAAAAGTCTTaGCTTTGTTTTACAAGGCCC +
Preference number: 3 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPLGEKS*LCFTRP
Trigger: GGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAA...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTTTGTTTCCCTTGGCTTaGTGGCATCCTGTGCTCTTG +
Preference number: 3 (lower is better)
Translates to: SLAWFMATFPDYLAAILGLFPLA*WHPVLL
Trigger: CAAGAGCACAGGATGCCACAAAGCCAAGGGAAACAA...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp TCTTGGAATGCTGCTCAGAAAAATAGATGTATTGTTTaGGAAACCCTGCAGGCTTGTCCCGCATGCTCTAGC +
Preference number: 3 (lower is better)
Translates to: SWNAAQKNRCIV*ETLQACPACSS
Trigger: GCTAGAGCATGCGGGACAAGCCTGCAGGGTTTCTCAAACAATACATCTATTTTTCTGAGCAGCATTCCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp TTAATCACTCAGTGGCACTTGGCACTTATTCCTTCTTaGAACCCTTGTTTCCCTTGGCTTTGTGGCATCCTG +
Preference number: 3 (lower is better)
Translates to: LITQWHLALIPS*NPCFPWLCGIL
Trigger: CAGGATGCCACAAAGCCAAGGGAAACAAGGGTTTCAAGAAGGAATAAGTGCCAAGTGCCACTGAGTGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp CCCCTTGAAACCATGCTTACCATTCCTTTAGAAGATTaGTCAAGCTGCCTCCAATTGCCTCTTTCCAAAACC +
Preference number: 3 (lower is better)
Translates to: PLETMLTIPLED*SSCLQLPLSKT
Trigger: GGTTTTGGAAAGAGGCAATTGGAGGCAGCTTGAGCAATCTTCTAAAGGAATGGTAAGCATGGTTTCAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CTTGATGCTGAGAACTTCCAAAATGTTGGTCTAGCCTaGGTCATTGTTATGAGCTCTAGACTCACAAGGCCA +
Preference number: 3 (lower is better)
Translates to: LDAENFQNVGLA*VIVMSSRLTRP
Trigger: TGGCCTTGTGAGTCTAGAGCTCATAACAATGACCCAGGCTAGACCAACATTTTGGAAGTTCTCAGCATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp ATTGCTGAGCAAACTACATTTCCCAGAACTCCTTGTTaGATTCCTTCCAAACAGGTTTACCACTGGGAGAGC +
Preference number: 3 (lower is better)
Translates to: IAEQTTFPRTPC*IPSKQVYHWES
Trigger: GCTCTCCCAGTGGTAAACCTGTTTGGAAGGAATCCAACAAGGAGTTCTGGGAAATGTAGTTTGCTCAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CTATCTCAACACCCCTACACTCTCACCGCACGTATTTaGTCAGCTATGAATATGACCAACTCTCGTCGTTTA +
Preference number: 3 (lower is better)
Translates to: LSQHPYTLTARI*SAMNMTNSRRL
Trigger: TAAACGACGAGAGTTGGTCATATTCATAGCTGACCAAATACGTGCGGTGAGAGTGTAGGGGTGTTGAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTATGGTGAGGGCCTCTaGGAGTTCATTCAAACTTTA +
Preference number: 3 (lower is better)
Translates to: ASVLRIRRKVFALFYKALYGEGL*EFIQTL
Trigger: TAAAGTTTGAATGAACTCCAAGAGGCCCTCACCATA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTTCCTTCTTGAAACCCTaGTTTCCCTTGGCTTTGTGG +
Preference number: 3 (lower is better)
Translates to: SLAWFMATFPDYLAAILGSFLKP*FPLALW
Trigger: CCACAAAGCCAAGGGAAACAAGGGTTTCAAGAAGGA...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp GAGTTTGCACTATTATTAGGGCAAGTAAGCTGCTTCTaGAAAGAAGGGGTTTGCAAAGCCAACCCAGGCAAA +
Preference number: 3 (lower is better)
Translates to: EFALLLGQVSCF*KEGVCKANPGK
Trigger: TTTGCCTGGGTTGGCTTTGCAAACCCCTTCTTTTCAGAAGCAGCTTACTTGCCCTAATAATAGTGCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp CCACAGTCCGCAAGTTGGTGCTATGTTTCATCTCATTaGATAATACTACACCATTCTCTGTGTGTAGTGGCT +
Preference number: 3 (lower is better)
Translates to: PQSASWCYVSSH*IILHHSLCVVA
Trigger: AGCCACTACACACAGAGAATGGTGTAGTATTATGCAATGAGATGAAACATAGCACCAACTTGCGGACTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp TTTCTTCTTAAAGTGGCCCAGACTGAGACTTTTCCTTaGGGAAAAGGGTTAGTAGCTCTTTGTAAGGCTGGT +
Preference number: 3 (lower is better)
Translates to: FLLKVAQTETFP*GKGLVALCKAG
Trigger: ACCAGCCTTACAAAGAGCTACTAACCCTTTTCCCCAAGGAAAAGTCTCAGTCTGGGCCACTTTAAGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CATTTAAATAGCTGTGTGTGGCTTGTGGCTGCCTATTaGACTGTGCAGTTCTGGAGAATGGTACTTTACTTG +
Preference number: 3 (lower is better)
Translates to: HLNSCVWLVAAY*TVQFWRMVLYL
Trigger: CAAGTAAAGTACCATTCTCCAGAACTGCACAGTCCAATAGGCAGCCACAAGCCACACACAGCTATTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp GAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTaGTTATCTTGCAGCTATATTAGGTCATGTGACAAA +
Preference number: 3 (lower is better)
Translates to: EYQPCLVHGHFS*LSCSYIRSCDK
Trigger: TTTGTCACATGACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp TTTCCAAATCTGGGGGAAATGCCACAGTCCGCAAGTTaGTGCTATGTTTCATCTCATTGCATAATACTACAC +
Preference number: 3 (lower is better)
Translates to: FPNLGEMPQSAS*CYVSSHCIILH
Trigger: GTGTAGTATTATGCAATGAGATGAAACATAGCACCAACTTGCGGACTGTGGCATTTCCCCCAGATTTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGGCACTTATTCCTTCTaGAAACCCTTGTTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTGTYSF*KPLFPL
Trigger: CAAGGGAAACAAGGGTTTCAAGAAGGAATAAGTGCC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCCTGCATATATGTATTaGGACCAATGCTCTCATGTG +
Preference number: 3 (lower is better)
Translates to: AILGRGADKMVYRRNRSIPAYMY*DQCSHV
Trigger: CACATGAGAGCATTGGTCCAAATACATATATGCAGG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp GATCCTCTTTTTATCTCATTCTACACACTCACAGCCTaGGTAATTCACACCATCTTGATGCTGAGAACTTCC +
Preference number: 3 (lower is better)
Translates to: DPLFISFYTLTA*VIHTILMLRTS
Trigger: GGAAGTTCTCAGCATCAAGATGGTGTGAATTACTCAGGCTGTGAGTGTGTAGAATGAGATAAAAAGAGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp TGGTACTTTACTTGTCCTTGGGGAAGCAGAAACAAATaGAAACGAGGATCTGGAGCTCATGAAGTTTCTCAT +
Preference number: 3 (lower is better)
Translates to: WYFTCPWGSRNK*KRGSGAHEVSH
Trigger: ATGAGAAACTTCATGAGCTCCAGATCCTCGTTTTCATTTGTTTCTGCTTCCCCAAGGACAAGTAAAGTACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR TCA 72 bp ATGGTAGCCACAAGTTACATGTGGCTATTGAACACTTaGAATGGGGTTAGTGCAATTGACGAGCTGAAAATG +
Preference number: 3 (lower is better)
Translates to: MVATSYMWLLNT*NGVSAIDELKM
Trigger: CATTTTCAGCTCGTCAATTGCACTAACCCCATTTCAAGTGTTCAATAGCCACATGTAACTTGTGGCTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp GAATTGAACAAACTGTCTAAGCTGGGTCAGGTACTCTaGAGATGTTTGCTGAGTATCGTTCTTGATGGAAAT +
Preference number: 3 (lower is better)
Translates to: ELNKLSKLGQVL*RCLLSIVLDGN
Trigger: ATTTCCATCAAGAACGATACTCAGCAAACATCTGCAGAGTACCTGACCCAGCTTAGACAGTTTGTTCAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp TATCTCTATTCAGTGGAACACAGCAGCACTGTGACCTaGCCACGAGAAGAAGGATTTTTAGAACTTATCTTA +
Preference number: 3 (lower is better)
Translates to: YLYSVEHSSTVT*PREEGFLELIL
Trigger: TAAGATAAGTTCTAAAAATCCTTCTTCTCGTGGGCAGGTCACAGTGCTGCTGTGTTCCACTGAATAGAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGTACTCTGCAGATGTTaGCTGAGTATCGTTCTTGAT +
Preference number: 3 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTVLCRC*LSIVLD
Trigger: ATCAAGAACGATACTCAGCAAACATCTGCAGAGTAC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACTGAATACATGCAAATaGTACATAAAACTCCCCCAA +
Preference number: 3 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTLNTCK*YIKLPQ
Trigger: TTGGGGGAGTTTTATGTACAATTTGCATGTATTCAG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CCA 72 bp CCAGCATTAACCTATTTATGCCTAGCGTTCCCTTATTaGAACACTAAGTCTGTGAGAGTTATTTACATCCTA +
Preference number: 3 (lower is better)
Translates to: PALTYLCLAFPY*NTKSVRVIYIL
Trigger: TAGGATGTAAATAACTCTCACAGACTTAGTGTTCCAATAAGGGAACGCTAGGCATAAATAGGTTAATGCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR GCA 72 bp TATATATATATACATATATGCATGATGCTGTGCAAATaGCCAGGGCTGTCTGGCATTTTCCACAAAATGAGA +
Preference number: 3 (lower is better)
Translates to: YIYIHICMMLCK*PGLSGIFHKMR
Trigger: TCTCATTTTGTGGAAAATGCCAGACAGCCCTGGGCATTTGCACAGCATCATGCATATATGTATATATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCGCAGTCCCTGTCGTCTaGGGCGCTGAGCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAAVPVV*GAEPFG
Trigger: GCCAAAGGGCTCAGCGCCCCAGACGACAGGGACTGC...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCTCGGCGCCTCCTAGGTaGGGGCTGTGCGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRSAPPR*GLCGQS
Trigger: GGACTGCCCGCACAGCCCGCACCTAGGAGGCGCCGA...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCTCCCCTCCTCACAGGTaGCCTGGACCGCCCACCATT +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGASPPHR*PGPPTI
Trigger: AATGGTGGGCGGTCCAGGGCACCTGTGAGGAGGGGA...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCCCCGGGGGCGTCCCATaGGGCGTTCGGGATCGGCGC +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGPGGVP*GVRDRR
Trigger: GCGCCGATCCCGAACGCCTCATGGGACGCCCCCGGG...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCCCTGTCCGAGGACTGTaGCATGACGTGCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAPVRGL*HDVLES
Trigger: TGACTCCAGCACGTCATGCCACAGTCCTCGGACAGG...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGCCCTAGAGAACACGTaGGCCCCTGCGTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEALENT*APAWAI
Trigger: GATTGCCCACGCAGGGGCGCACGTGTTCTCTAGGGC...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCTGGGGGAAAGAGATCTaGTTGCAGTCGGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAWGKEI*LQSARE
Trigger: CTCTCTGGCCGACTGCAAGCAGATCTCTTTCCCCCA...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCGGCTGCGGGAGGACATaGTCCGGAGCTCAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGGCGRT*SGAQPR
Trigger: CCGGGGCTGAGCTCCGGACCATGTCCTCCCGCAGCC...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGCGCCGAGAAGACTGTaGCACCCGCCACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEAPRRL*HPPPGR
Trigger: TCTACCTGGTGGCGGGTGCCACAGTCTTCTCGGCGC...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCCCTTCAGCAGGAACCTaGCCAGTCCTTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAPSAGT*PVLSGG
Trigger: TCCTCCACTAAGGACTGGCCAGGTTCCTGCTGAAGG...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCCCAGCCGGTTGTTCATaGTGCCCAGCGCGCCCACGC +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGPAGCS*CPARPR
Trigger: GCGTGGGCGCGCTGGGCATCATGAACAACCGGCTGG...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCAGAAAGCGCCAGCAGTaGCTGAGAGAAGCAAACCAC +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGARKRQQ*LREANH
Trigger: GTGGTTTGCTTCTCTCAGTCACTGCTGGCGCTTTCT...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCAATTGTGCTCTGGGGTaGCTGAAAGTGCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGANCALG*LKVPEL
Trigger: CAGCTCTGGCACTTTCAGGCACCCCAGAGCACAATT...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGTGGGAGAGGGATGGGTaGACGGTGAACAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEWERDG*TVNSRW
Trigger: CCACCTGCTGTTCACCGTGCACCCATCCCTCTCCCA...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGCCCAGCCCTCCACGCTaGTGTACATGGCCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWPSPPR*CTWPRR
Trigger: GCGCCTCGGCCATGTACACCAGCGTGGAGGGCTGGG...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACCTGGGGGTCAGGAATaGCCTCAGCAGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAPGGQE*PQQALP
Trigger: AGGGAGGGCCTGCTGAGGCCATTCCTGACCCCCAGG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp CTTCTCTGCCTACCCAGGCTGGGTGGCTGCCTCTCTTaGGTGTGCCCATGGCAGCCCAGAATGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLCLPRLGGCLS*VCPWQPRMPGG
Trigger: TCCACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAACAGCCCGTAGGCGATaGGGAAGGCCTTCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKETARRR*GRPSRP
Trigger: TGGGCGGGAAGGCCTTCCTCATCGCCTACGGGCTGT...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAGGTCGCGCATGGAGATaGGCTCGCCCGAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAGRAWR*ARPRGG
Trigger: GCCGCCTCTCGGGCGAGCTCATCTCCATGCGCGACC...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCGGAGGCAGGCGGCTCTaGCAGACAGAAAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRGGRRL*QTESKQ
Trigger: CTGTTTGCTTTCTGTCTGTCAGAGCCGCCTGCCTCC...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGACCTAGGTGCGGGCTGTaGGGGCAGTCCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGPRCGL*GQSCSR
Trigger: GCGGGAGCAGGACTGCCCGCACAGCCCGCACCTAGG...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCAGGGACCCCCTATGCTaGAGAAGGCAAGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRRDPLC*RRQVWE
Trigger: CTCCCAGACTTGCCTTCTGCAGCATAGGGGGTCCCT...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGCGCAGCCGGGAGCCTaGGGTGATGGCATTGCGCCG +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGAQPGA*GDGIAP
Trigger: CGGCGCAATGCCATCACCCCAGGCTCCCGGCTGCGC...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCAGGAGGAGGAGAAGCTaGAGGGCTGCGCCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGRRRRS*RAAPGN
Trigger: GTTGCCGGGCGCAGCCCTCCAGCTTCTCCTCCTCCT...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCATCATGCTCAACAGGGTaGGGAGCCCAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPASCSTG*GAQGSG
Trigger: CCCACTCCCCTGGGCTCCCCACCCTGTTGAGCATGA...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp GTACGGCCCGGGCCTCGGGATCCTTTAAAGCTCCATTaGGAGAGCCTCGGGCACAGCCAGGTTGGATCCATC +
Preference number: 4 (lower is better)
Translates to: VRPGPRDPLKLH*ESLGHSQVGSI
Trigger: GATGGATCCAACCTGGCTGTGCCCGAGGCTCTCCAAATGGAGCTTTAAAGGATCCCGAGGCCCGGGCCGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACCAGGTAGAGGCCGATaGGCGCCGCCAGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAPGRGR*APPAAR
Trigger: TCGTGCTGCTGGCGGCGCTCATCGGCCTCTACCTGG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACCCACCTCAGCCCCCTaGGTCTCTTGGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLPTSAP*VSWTPG
Trigger: GCCTGGAGTCCAAGAGACTCAGGGGGCTGAGGTGGG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCTGTTCCACGCACATTTaGCAGGGAGAGAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGACSTHI*QGERFH
Trigger: GTGAAATCTCTCTCCCTGGCAAATGTGCGTGGAACA...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGGAAGGCGCGCAGCTCTaGCTCGGCCACGCCGTGCGC +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLEGAQL*LGHAVR
Trigger: GCGCACGGCGTGGCCGAGCCAGAGCTGCGCGCCTTC...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTATGCGCGGGTAGCCGTTaGCCGTCTCCGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLCAGSR*PSPTAA
Trigger: AGCAGCTGTCGGAGACGGCCAACGGCTACCCGCGCA...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCTCTACCTGGAGGCGCTaGTCTCGGCCAGCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGSTWRR*SRPAGC
Trigger: ACAACCGGCTGGCCGAGACCAGCGCCTCCAGGTAGA...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCCGGGCACAGCCAGGTTaGATCCATCTCCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGRAQPG*IHLPVP
Trigger: GGGGACTGGGAGATGGATCCAACCTGGCTGTGCCCG...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCCCCATGGTTATCTCATaGGTCCCTGAAGTCCAACTT +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAPMVIS*VPEVQL
Trigger: AAGTTGGACTTCAGGGACCCATGAGATAACCATGGG...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCGGGGTGGGAGAGGGATaGGTGCACGGTGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGGVGEG*VHGEQQ
Trigger: CTGCTGTTCACCGTGCACCCATCCCTCTCCCACCCC...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCGACAGGAAAGCATCCTaGGTACACAAAAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGADRKAS*VHKSQG
Trigger: GCCTTGACTTTTGTGTACCCAGGATGCTTTCCTGTC...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp CCAGGGACATCAAGGGCGGTCCTGTCTTTCTCACCCTaGTCTCTCCAGCCCCTAACACAGGGGATGCCTGAC +
Preference number: 4 (lower is better)
Translates to: PGTSRAVLSFSP*SLQPLTQGMPD
Trigger: GTCAGGCATCCCCTGTGTTAGGGGCTGGAGAGACAAGGGTGAGAAAGACAGGACCGCCCTTGATGTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp TGCCTGGGCCACTCTTCCTGCTCCTTGTCAGCAGGCTaGCTGCTCTCAGGCTCAGCATGGACAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CLGHSSCSLSAG*LLSGSAWTAAS
Trigger: AGAAGCAGCTGTCCATGCTGAGCCTGAGAGCAGCAAGCCTGCTGACAAGGAGCAGGAAGAGTGGCCCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAAGGCCAGCAGCGAGATaGTGCGCTCCAGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKERPAAR*CAPGRG
Trigger: ACCTCTTCCTGGAGCGCATCATCTCGCTGCTGGCCT...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCGGAAGCAGAAACAAATaGAAACGAGGATCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAGSRNK*KRGSGA
Trigger: AGCTCCAGATCCTCGTTTTCATTTGTTTCTGCTTCC...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCGAACACGTGCGCCCCTaGGTGGGCAATCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGEHVRP*VGNPFT
Trigger: AGTGAAGGGATTGCCCACGCAGGGGCGCACGTGTTC...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACCACCGTCGCGGGGGTaGTCATGCCGAAACCTATGG +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLPPSRG*SCRNLW
Trigger: CCATAGGTTTCGGCATGACCACCCCCGCGACGGTGG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGTCCCAAGGACGCAGCTaGCAGAGGTGCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWSQGRS*QRCLLQ
Trigger: CTGAAGGAGGCACCTCTGCCAGCTGCGTCCTTGGGA...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGCTCCAGGATCTGCCCTaGGGGCTATCTCAACACCCC +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWLQDLP*GLSQHP
Trigger: GGGGTGTTGAGATAGCCCCCAGGGCAGATCCTGGAG...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCGGCCGGTGTCCTCGTTaGGGTGCGAACGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVGRCPR*GANGGS
Trigger: GCTGCCGCCGTTCGCACCTCAACGAGGACACCGGCC...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGCGTTCTGGCGCGTGTTaGCGCACACGCTGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLRSGAC*RTRCAG
Trigger: ACCCGCGCAGCGTGTGCGTCAACACGCGCCAGAACG...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAAGCGCCAGCAGTGACTaGGAGAAGCAAACCACGCCC +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLSASSD*EKQTTP
Trigger: GGGCGTGGTTTGCTTCTCTCAGTCACTGCTGGCGCT...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGCTCTCTGGATGGCTCTaGTCCCCAAGTTATTTCCTG +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAELSGWL*SPSYFL
Trigger: CAGGAAATAACTTGGGGATCAGAGCCATCCAGAGAG...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCAGACCCCCAAGACAGTaGGAGAGGCCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGRPPRQ*ERPQHL
Trigger: CAGATGCTGTGGCCTCTCTCACTGTCTTGGGGGTCT...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGCAGGGGAGTGGGGAGTaGTCGTATAGACAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWQGSGE*SYRQRW
Trigger: CCACCTCTGTCTATACGATCACTCCCCACTCCCCTG...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAGGGATGGGTGCACGGTaGACAGCAGGTGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAGMGAR*TAGGGL
Trigger: AAGACCCCCACCTGCTGTTCACCGTGCACCCATCCC...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGGCAGAGTAAATGTGTaGGTTGAAGGGAGCAACCTC +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEGRVNV*VEGSNL
Trigger: GAGGTTGCTCCCTTCAACTCACACATTTACTCTGCC...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAACCGAGGACTGTGGCATaGCGTGCTGGAGTCACGATT +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKEPRTVA*RAGVTI
Trigger: AATCGTGACTCCAGCACGTCATGCCACAGTCCTCGG...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAGCTTCTGAGTGGTCATaGTCAACAGGGTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKEASEWS*STGWGA
Trigger: GGCTCCCCACCCTGTTGAGCATGACCACTCAGAAGC...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACACACACTGCTCCTCTaGCTGGGCCACTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLHTLLL*LGHSSC
Trigger: GCAGGAAGAGTGGCCCAGGCAGAGGAGCAGTGTGTG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGAAGCTCACACTCCCCTaGGGCTGCTTCTGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWKLTLP*GCFCQG
Trigger: ACCTTGGCAGAAGCAGCCGCAGGGGAGTGTGAGCTT...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACAATCCCCTCCCCCTTaGTGTCCTCTTGTACAGAGG +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAQSPPP*CPLVQR
Trigger: CCTCTGTACAAGAGGACAGCAAGGGGGAGGGGATTG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGCTGATGTCAGCTGGCTaGCAACACGTCAGTTGTATC +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAELMSAG*QHVSCI
Trigger: GATACAACTGACGTGTTGGCAGCCAGCTGACATCAG...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACCACGCTGGTGTACATaGCCGAGGCGCAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAPRWCT*PRRSRT
Trigger: TGTCCTGCTGCGCCTCGGCCATGTACACCAGCGTGG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGATGGTGCTGCAGGCCCTaGTTCCCAAGGACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGWCCRP*FPRTQL
Trigger: CAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCA...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGTGCCTGTATAAACTCTaGCACCTGTCCTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAECLYKL*HLSLPS
Trigger: TGAGGGCAAGGACAGGTGCCAGAGTTTATACAGGCA...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGTGTACCTTGGAGGACTaGCGTTTCTCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAECTLED*RFSGKL
Trigger: CAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACA...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAAAGGGGAAGAGGGTTTaGGGCCAGGTCCGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLKGKRV*GQVRVQ
Trigger: CTGCACTCGGACCTGGCCCCAAACCCTCTTCCCCTT...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTATCTGCCTACCCAGGCTaGGTGGCTGCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLSAYPG*VAASLW
Trigger: CCAAAGAGAGGCAGCCACCCAGCCTGGGTAGGCAGA...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCCTTGTGGCTGCCTATTaGACTGTGCAGTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRLVAAY*TVQFWR
Trigger: TCTCCAGAACTGCACAGTCCAATAGGCAGCCACAAG...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACAGAGGAGACCACAGTaGGGCATGATGGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAQRRPQ*GMMVGE
Trigger: TTCCCCAACCATCATGCCCCACTGTGGTCTCCTCTG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCTTTCCCTTCCTGCCATaGACTAGAAGGGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRFPFLP*TRRGKK
Trigger: CTTCTTTCCCCTTCTAGTTCATGGCAGGAAGGGAAA...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGGCTGGGAGGCCTGTCTaGAGGACGGAGGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLAGRPV*RTEDPG
Trigger: CCCAGGATCCTCCGTCCTTCAGACAGGCCTCCCAGC...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGGTGCTCTGGGGTGCCTaGAAGTGCCAGAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQVLWGA*KCQSCF
Trigger: GAAGCAGCTCTGGCACTTTCAGGCACCCCAGAGCAC...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAATGGACAGCTGCTTCTaGGAGCCTTCTCTGCCTACC +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKEMDSCF*EPSLPT
Trigger: GGTAGGCAGAGAAGGCTCTCAGAAGCAGCTGTCCAT...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAGTGTGGCCTCCTTACTaGGCCTCATTTCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKEVWPPY*ASFPSV
Trigger: GACAGAGGGAAATGAGGCTCAGTAAGGAGGCCACAC...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCTCTTGTACAGAGGACTaGAAGCACAACACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRSCTED*KHNTLS
Trigger: GGAGAGAGTGTTGTGCTTTCAGTCCTCTGTACAAGA...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCGGTTTAGTGCCAGTCTaGAAAACCCTCCTCGCTGCG +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGGLVPV*KTLLAA
Trigger: CGCAGCGAGGAGGGTTTTGCAGACTGGCACTAAACC...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCGCCTCCAATAGGCTGTaGATGGAGAAGACAAATCCT +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRASNRL*MEKTNP
Trigger: AGGATTTGTCTTCTCCATGCACAGCCTATTGGAGGC...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGGCCTGGGTTTTAGGCTaGTGTACTGTTGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWAWVLG*CTVAGA
Trigger: AGCCCCAGCAACAGTACAGCAGCCTAAAACCCAGGC...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACACTGGATCCTGAGCTaGCATTGTACCTTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAHWILS*HCTLED
Trigger: GTCCTCCAAGGTACAATGGCAGCTCAGGATCCAGTG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCATCTGAGAGCCTTCTCTaGCTACCCAGGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALASESLL*LPRLGG
Trigger: GCCACCCAGCCTGGGTAGGCAGAGAAGGCTCTCAGA...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAATACCTTGGTCCACCCTaGCATCTGCTTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKEYLGPP*HLLSSS
Trigger: GGAGGAGGAAAGCAGATGGCAGGGTGGACCAAGGTA...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCACTGCCTCTGAACTCTaGTCTGCATTGCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRTASEL*SALLSK
Trigger: TTTGCTCAGCAATGCAGAGCAGAGTTCAGAGGCAGT...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCGCAGATGGTACCTGGTaGAGGATTGTGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGADGTW*RIVVSR
Trigger: CCTGGACACCACAATCCTGCACCAGGTACCATCTGC...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTGACGGGCGGTCTACCTaGAGGCGCTGGTCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPDGRST*RRWSRP
Trigger: TGGCCGAGACCAGCGCCTCCAGGTAGACCGCCCGTC...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGTGCAATTTCCAAATCTaGGGGAAATGCCACAGTCCG +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAECNFQI*GKCHSP
Trigger: CGGACTGTGGCATTTCCCCCAGATTTGGAAATTGCA...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACAAGATGGCTTCTTTTaGGTTCCTGGTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAQDGFF*VPGAAG
Trigger: GCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCATACACATGTGCCACTaGATCCTGAGCTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRIHMCH*ILSCHC
Trigger: ACAATGGCAGCTCAGGATCCAGTGGCACATGTGTAT...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGATGCCCAGGGCTGTCTaGCATTTTCCACAAAATGAG +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEMPRAV*HFPQNE
Trigger: CTCATTTTGTGGAAAATGCCAGACAGCCCTGGGCAT...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCTCAGATGCCCTAGGCTaGCTGTCTGGCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGSDALG*LSGCAF
Trigger: GAAAGCACAGCCAGACAGCCAGCCTAGGGCATCTGA...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCTGATGAGCCCACCCTaGGGGTCAGGAATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQLMSPP*GSGMAS
Trigger: TGAGGCCATTCCTGACCCCCAGGGTGGGCTCATCAG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACCTACCCAGGCTGGGTaGCTGCCTCTCTTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAPTQAG*LPLFGV
Trigger: CACACCAAAGAGAGGCAGCCACCCAGCCTGGGTAGG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGTTTCCCTTGGCTTTGTaGCATCCTGTGCTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEFPLAL*HPVLLV
Trigger: AACCAAGAGCACAGGATGCCACAAAGCCAAGGGAAA...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCAGTACCAGCCTTGCTTaGTTCATGGCCACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRSTSLA*FMATFP
Trigger: AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACT...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGAACCCCAGCATCTGTaGTGTCTGTGGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGEPQHL*CLWWEG
Trigger: CCCCTCCCACCACAGACACCACAGATGCTGGGGTTC...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGAGGAGCAGACAAGATaGTGTACAGGAGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEEEQTR*CTGETG
Trigger: ACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTC...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp AAGGCCCTTCGCTATCTGGCCCCCTCATTACCTCCCTaGCTCTGCATGCTCCAGTCCTGCAGAACTACACAC +
Preference number: 4 (lower is better)
Translates to: KALRYLAPSLPP*LCMLQSCRTTH
Trigger: GTGTGTAGTTCTGCAGGACTGGAGCATGCAGAGCAAGGGAGGTAATGAGGGGGCCAGATAGCGAAGGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCCGCCGTGCGCAGCGCTaGAGTTGCGCAGCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSRRAQR*SCAAWR
Trigger: GCGCCACGCTGCGCAACTTCAGCGCTGCGCACGGCG...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGGCCGAAACCTATGGTTaGCACCACGGTGCCCACGAA +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQAETYG*HHGAHE
Trigger: TTCGTGGGCACCGTGGTGTCAACCATAGGTTTCGGC...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAACTGTGGATGAGCTTGTaGAAGAAAGGACGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKELWMSL*KKGRLG
Trigger: CCCCAACCGTCCTTTCTTTCACAAGCTCATCCACAG...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGGCCACAGTCATATGGTaGGGGCCTCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWATVIW*GPLGVH
Trigger: ATGAACTCCAAGAGGCCCTCACCATATGACTGTGGC...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACATGGGACTCAGATCTaGAGCAGCCTCTCCGGGACT +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAHGTQI*SSLSGT
Trigger: AGTCCCGGAGAGGCTGCTTCAGATCTGAGTCCCATG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCTCCTATCAGAAGCTGTaGATACTGGTGGGTCACGCC +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGSYQKL*ILVGHA
Trigger: GGCGTGACCCACCAGTATGCACAGCTTCTGATAGGA...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGCAAGCTGCCTCCAATTaGCTCTTTCCAAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEQAASN*LFPKPK
Trigger: CTTTGGTTTTGGAAAGAGGCAATTGGAGGCAGCTTG...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGACTGGGCCACTCTTCCTaGTCCTTGTCAGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGLGHSS*SLSAGL
Trigger: CAAGCCTGCTGACAAGGAGCAGGAAGAGTGGCCCAG...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCTTGCACCATATGCTTTaGGGTTGCCGGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGLHHML*GCRLLL
Trigger: CAGAAGCAGCCGGCAACCCCAAAGCATATGGTGCAA...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCCCACAGTCCGCAAGTTaGTGCTATGTTTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRPQSAS*CYVSSH
Trigger: ATGAGATGAAACATAGCACCAACTTGCGGACTGTGG...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCCAGCGCTGCTTCACTaGCTTCACCCCAGATTAGGG +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQPALLH*LHPRLG
Trigger: CCCTAATCTGGGGTGAAGCCAGTGAAGCAGCGCTGG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGTCTGGAGGTGGGTCCTaGTTCCTCCCATGGAGACCA +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQSGGGS*FLPWRP
Trigger: TGGTCTCCATGGGAGGAACCAGGACCCACCTCCAGA...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCGCTGCCATTGTACCTTaGAGGACTGGCGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGAAIVP*RTGVSL
Trigger: CAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGC...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAACAGTGAGCTACCAGTaGTGTGCAAACTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKETVSYQ*CANWRP
Trigger: GGGTCTCCAGTTTGCACACCACTGGTAGCTCACTGT...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACTCTCAGGCTCAGCATaGACAGCTGCTTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLLSGSA*TAASES
Trigger: GCTCTCAGAAGCAGCTGTCCATGCTGAGCCTGAGAG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAACGGTGAACAGCAGGTaGGGGTCTTTCCATAGGGGA +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLTVNSR*GSFHRG
Trigger: TCCCCTATGGAAAGACCCCCACCTGCTGTTCACCGT...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACAAATGCTTTTGCCCTaGGGGTGGGAGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAQMLLP*GWERDG
Trigger: CCCATCCCTCTCCCACCCCCAGGGCAAAAGCATTTG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGCGGGAGCAGGAGCGTaGGGATGGTGGCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIAGAGA*GWWPGV
Trigger: GACCCCTGGCCACCATCCTCACGCTCCTGCTCCCGC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGCAATCCCTTCACTGTaGCCGCAACCATGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGAIPSL*PQPWVG
Trigger: TCCAACCCATGGTTGCGGTCACAGTGAAGGGATTGC...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGCTTCTCCTTTGGCCATaGGGGCTCAGTCATCCCTCA +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQLLLWP*GLSHPS
Trigger: TGAGGGATGACTGAGCCCTCATGGCCAAAGGAGAAG...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGCAAGTAAGCTGCTTCTaGAAAGAAGGGGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEQVSCF*KEGVCK
Trigger: TTTGCAAACCCCTTCTTTTCAGAAGCAGCTTACTTG...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGAACAGAGAGGAGAGCTaGTGGGTGACGAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWNREES*WVTRNQ
Trigger: CTGATTTCTCGTCACCCATCAGCTCTCCTCTCTGTT...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAAGTGTGCTAATGGGATaGTGTGCCCTTGTACACCCA +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKESVLMG*CALVHP
Trigger: TGGGTGTACAAGGGCACATCATCCCATTAGCACACT...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGGCTGAGTATCGTTCTTaGTGGAAATCCCCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWAEYRS*WKSPWN
Trigger: GTTCCACGGGGATTTCCATCAAGAACGATACTCAGC...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCTTACCCGCACAGGTGTaGCATCACAGGGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGLPAQV*HHRVTK
Trigger: TTTGGTTACCCTGTGATGTCACACCTGTGCGGGTAA...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAAACACAGCAGCACTGTaGCCTGCCCACGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGNTAAL*PAHEKK
Trigger: CTTCTTCTCGTGGGCAGGTCACAGTGCTGCTGTGTT...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAACAGGAGGGACCCTGTaGTTGGCAGTTCCACTAGAC +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGTGGTL*LAVPLD
Trigger: GTCTAGTGGAACTGCCAATCACAGGGTCCCTCCTGT...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCATGGCCAGGTTGGAGTTaGTTGCCAATGATAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAWPGWS*LPMIGL
Trigger: AAGACCTATCATTGGCAATCAACTCCAACCTGGCCA...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGGAAACCACAGTCTCTaGTGTCAGCTGGCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGGNHSL*CQLAAN
Trigger: GTTGGCAGCCAGCTGACATCAGAGACTGTGGTTTCC...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGCCCAGCAGGGCTCCTaGAGCCTCACCGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIAQQGS*SLTAPL
Trigger: GAGGGGAGCGGTGAGGCTGCAGGAGCCCTGCTGGGC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCAGCTACCTCCCTCCTaGCTTCCTCTGCCTCCAATA +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQQLPPS*LPLPPI
Trigger: TATTGGAGGCAGAGGAAGGCAGGAGGGAGGTAGCTG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCCTGGCTGTCTGGCTGTaGTTTCCAGACAGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGLAVWL*FPDSVY
Trigger: ATACACACTGTCTGGAAAGCACAGCCAGACAGCCAG...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTCAGCCTGGCCAAGCTaGCCAGGAGGTCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSSAWPS*PGGPLV
Trigger: CACCAAGGGACCTCCTGGGCAGCTTGGCCAGGCTGA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACTCCCTTGCTCTGCATaGTCCAGTCCTGCAGAACTA +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLLPCSA*SSPAEL
Trigger: TAGTTCTGCAGGACTGGAGCATGCAGAGCAAGGGAG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGAGGTCCCACTGCAGCTaGATAATGTCCCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQRSHCS*IMSPQW
Trigger: CCACTGAGGGGACATTATGCAGCTGCAGTGGGACCT...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGACCTCAGAGGTCCCACTaGAGCTGCATAATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGPQRSH*SCIMSP
Trigger: AGGGGACATTATGCAGCTGCAGTGGGACCTCTGAGG...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAGCTTGTGCTTCTGAGTaGTCATGCTCAACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLACASE*SCSTGW
Trigger: CCACCCTGTTGAGCATGACCACTCAGAAGCACAAGC...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCGCCCAGAATGCCTGGTaGACAGGGAGCCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVAQNAW*TGSPQQ
Trigger: CTGCTGAGGGCTCCCTGTCCACCAGGCATTCTGGGC...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTGCAGCCCAGAATGCCTaGTGGACAGGGAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPAAQNA*WTGSPQ
Trigger: CTGAGGGCTCCCTGTCCACCAGGCATTCTGGGCTGC...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGAGCCAGCCTTACCGATaGCATCACTGTCACTGCGCT +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQSQPYR*HHCHCA
Trigger: AGCGCAGTGACAGTGATGCCATCGGTAAGGCTGGCT...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAATTCAGGCCAGGGTCTTaGAAGGTTGTTCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKEFRPGS*KVVQDE
Trigger: CTCATCCTGAACAACCTTCCAAGACCCTGGCCTGAA...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp GAGCCAAATACCCTGACATTTGCAAGATGGCTTCTTTaGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: EPNTLTFARWLL*GSWCCRPWFPR
Trigger: CCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGCAAATGTCAGGGTATTTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp ATCTCTCCACGTCTCTGTGTTCTCACTAGCACTACCTaGGTCCACCCTGCCATCTGCTTTCCTCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: ISPRLCVLTSTT*VHPAICFPPPL
Trigger: GAGTGGAGGAGGAAAGCAGATGGCAGGGTGGACCAAGGTAGTGCTAGTGAGAACACAGAGACGTGGAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCGAACAGGCCCAGGATaGGCAGCACGTGGTACACCG +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALRTGPG*AARGTP
Trigger: CGGTGTACCACGTGCTGCTCATCCTGGGCCTGTTCG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGTGGAGCCAAATACCCTaGCATTTGCAAGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWWSQIP*HLQDGF
Trigger: GAAGCCATCTTGCAAATGTCAGGGTATTTGGCTCCA...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGAGAGGCCACAGCATCTaGGGGAATGGAGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQRGHSI*GNGALS
Trigger: AGAAAGAGCTCCATTCCCTCAGATGCTGTGGCCTCT...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTAGAGCAACTTCCCAGTaGTGCTGCCACTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSRATSQ*CCHWAP
Trigger: TGGGGCCCAGTGGCAGCATCACTGGGAAGTTGCTCT...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGAAGCCAGTATTATTTTaGACCTCTGTTAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEKPVLF*TSVRVA
Trigger: AGCCACTCTAACAGAGGTTCAAAATAATACTGGCTT...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGATACACCCACTGCCTCTaGACTCTGCTCTGCATTGCT +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGYTHCL*TLLCIA
Trigger: AGCAATGCAGAGCAGAGTTCAGAGGCAGTGGGTGTA...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAAAGGGAGCAACCTCATaGGGTTTTGCTTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAKGATS*GFALCL
Trigger: AAGACACAAAGCAAAACCTCATGAGGTTGCTCCCTT...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGGCTCGGCCACGCCGTaGGCAGCGCTGAAGTTGCGC +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTGSATP*AALKLR
Trigger: GCGCAACTTCAGCGCTGCGCACGGCGTGGCCGAGCC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTGCCGTCTCCGACAGCTaGTTCTGCAGCAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIAVSDS*FCSSAS
Trigger: GCTGGCGCTGCTGCAGAAGCAGCTGTCGGAGACGGC...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACAAATCTGGGGGAAATaGCACAGTCCGCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLQIWGK*HSPQVG
Trigger: ACCAACTTGCGGACTGTGGCATTTCCCCCAGATTTG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAACCATTAGAAGTAGCTaGCCTGTGCTCTGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPATIRSS*PVLCAK
Trigger: TTTAGCACAGAGCACAGGGCAGCTACTTCTAATGGT...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCTTGGGTTCCTGGTGCTaGAGGCCCTGGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVLGSWC*RPWFPR
Trigger: CCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAA...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAGGTAGGCTGTTATTTTaGCCGCAGATCAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKEGRLLF*PQIKSS
Trigger: TGAGGACTTGATCTGCGGGCAAAATAACAGCCTACC...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCATATGCATGATGCTGTaGAAATGCCCAGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: STHICQGERFHSMAPAGGICMML*KCPGLS
Trigger: AGACAGCCCTGGGCATTTGCACAGCATCATGCATAT...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGCAGGCAAAAGCAATCTaGTGGAAGAACTTCATCCCC +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWQAKAI*WKNFIP
Trigger: GGGGATGAAGTTCTTCCAGCAGATTGCTTTTGCCTG...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCGTACTGCAGCGCCCTaGCCCCGTCAGCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIRTAAP*PRQPPG
Trigger: TCCTGGAGGCTGACGGGGGCAGGGCGCTGCAGTACG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAGAGCCAAAAGACCAGTaGCTCATTTTGCTGACATGG +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKEEPKDQ*LILLTW
Trigger: CCATGTCAGCAAAATGAGGCACTGGTCTTTTGGCTC...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCCCGAGAAGCCGTTCTaGCGCGTGTTGACGCACACG +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALPEKPF*RVLTHT
Trigger: CGTGTGCGTCAACACGCGCCAGAACGGCTTCTCGGG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTCCCTGGGTGTGGGCCTaGGGGGCCACGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIPWVWA*GATFSL
Trigger: GAGAGAAAACGTGGCCCCCCAGGCCCACACCCAGGG...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGGGCTGCTTCTGTGCATaGGGACGGGGTTTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLGCFCA*GRGLVP
Trigger: TGGCACTAAACCCCGTCCCCATGCACAGAAGCAGCC...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAGAAAGAAAGGACGGTTaGGGGATTCAAGATCTGCCG +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLERKDG*GIQDLP
Trigger: CGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTC...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCGGTAACACCTCTAATTaGATGCCTTTTAATCGTTCC +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRGNTSN*MPFNRS
Trigger: GGAACGATTAAAAGGCATCCAATTAGAGGTGTTACC...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAACTAGCTAATGGGTCTTaGCTGGAAGCTAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKELANGS*LEANRK
Trigger: CTTCCTGTTAGCTTCCAGCCAAGACCCATTAGCTAG...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTGCCCATCACATAGCTaGGGCACAGCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSCPSHS*GTAGDP
Trigger: GGGGTCTCCAGCTGTGCCCCAGCTATGTGATGGGCA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTGTGGCTGCCTCTCTTTaGTGTGCCCATGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPVAASL*CAHGSP
Trigger: TGGGCTGCCATGGGCACACCAAAGAGAGGCAGCCAC...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACATCTGTGGTGTCTGTaGTGGGAGGGGCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAHLWCL*WEGLPY
Trigger: ATATGGAAGCCCCTCCCACCACAGACACCACAGATG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGAGCAGGAAGGATATCTaGCTTTTGCTTGAATTAGCT +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAESRKDI*LLLELA
Trigger: AGCTAATTCAAGCAAAAGCCAGATATCCTTCCTGCT...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAATGTGTAATCTCTGTGTaGCCCAGTACAGAGCATGCA +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKECVISV*PSTEHA
Trigger: TGCATGCTCTGTACTGGGCCACACAGAGATTACACA...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCATGTATCAGCATTAGCTaGCTGGAGGTGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALACISIS*LEVACC
Trigger: ACAGCAGGCCACCTCCAGCCAGCTAATGCTGATACA...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp CGTGCATGTTTGTGTGTGTGTGTGTTCCACGCACATTaGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RACLCVCVFHAH*PGREISQHGSS
Trigger: GCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGAACACACACACACACAAACATGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTATGCTCCTTAGACCAATaGAATCAGACTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLCSLDQ*NQTPGS
Trigger: ACTCCCAGGAGTCTGATTTCATTGGTCTAAGGAGCA...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCATGTATCCCTAATGTGTaGCCCATGAAAATTAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPACIPNV*PMKISQ
Trigger: CTGGCTAATTTTCATGGGTCACACATTAGGGATACA...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACTCTCTTCTGGTCAATaGGATGCAGCAGAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLLSSGQ*DAAESP
Trigger: AGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTTGCCGGCTGCTTCTGTaGATGGGGACGGGGTTTAGT +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPCRLLL*MGTGFS
Trigger: ACTAAACCCCGTCCCCATGCACAGAAGCAGCCGGCA...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGCAAGTTATTTCCTGTTaGCTAGGTAACACCTCTAAT +
Preference number: 4 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEQVISC*LGNTSN
Trigger: ATTAGAGGTGTTACCTAGGCAACAGGAAATAACTTG...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCCAGGCTTGTCCCGCATaGTCTAGCCCCCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRQACPA*SSPLLR
Trigger: TCTCAGGAGGGGGCTAGAGCATGCGGGACAAGCCTG...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCCAGGAGGTCCCTTGGTaGCCTGGGCTCTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVQEVPW*PGLCFT
Trigger: AGTGAAACAGAGCCCAGGGCACCAAGGGACCTCCTG...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAAGACATGAGCCACCATaGCCAGCTAAAAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKERHEPP*PAKSSF
Trigger: AAAGGAACTTTTAGCTGGGCATGGTGGCTCATGTCT...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGTGGGAGTACCAGCCTTaGTTGGTTCATGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQWEYQP*LVHGHF
Trigger: AAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCA...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCAAGGCTCCAGGATCTaGCCTGGGGGCTATCTCAAC +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPQGSRI*PGGYLN
Trigger: GTTGAGATAGCCCCCAGGGCAGATCCTGGAGCCTTG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGGCAGTTCCACTAGACTaGATGGAGATGGGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQAVPLD*MEMGGV
Trigger: AACTCCACCCATCTCCATGCAGTCTAGTGGAACTGC...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTGGCATCACTGTCACTaGGCTAGCCCCAGACCACCT +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSWHHCH*ASPRPP
Trigger: AGGTGGTCTGGGGCTAGCGCAGTGACAGTGATGCCA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGAGCTGTGCATACTGGTaGGTCACGCCGTGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLSCAYW*VTPCLY
Trigger: ATACAGGCACGGCGTGACCCACCAGTATGCACAGCT...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCCACTGCTCCTCTGCCTaGGCCACTCTTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRHCSSA*ATLPAP
Trigger: AGGAGCAGGAAGAGTGGCCCAGGCAGAGGAGCAGTG...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTGGAACCCCTCCCCCATaGTTATCTCATGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSGTPPP*LSHGSL
Trigger: CAGGGACCCATGAGATAACCATGGGGGAGGGGTTCC...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAGCCTTGCTTGGTTCATaGCCACTTTTCCTGATTATC +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKEALLGS*PLFLII
Trigger: GATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGC...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCACTGGGAGAGCCTGTTaGTTGGGGAGGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVTGRAC*LGRAGR
Trigger: TCTTCCTGCCCTCCCCAACCAACAGGCTCTCCCAGT...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTCATCCTGCATCCAGATaGCTGGTCCTGCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSHPASR*LVLLLP
Trigger: TGGGAGGAGCAGGACCAGCCATCTGGATGCAGGATG...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAATTAAATAGCTGTGTGTaGCTTGTGGCTGCCTATTGG +
Preference number: 4 (lower is better)
Translates to: LKENLLGATVLQEGTHKELNSCV*LVAAYW
Trigger: CCAATAGGCAGCCACAAGCCACACACAGCTATTTAA...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCTCCAGCTGGAGGCGGTaGGGCGGTGCTTTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRSSWRR*GGAFLR
Trigger: TCTTAGAAAAGCACCGCCTCACCGCCTCCAGCTGGA...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTTGTCGTCTGGGGCGCTaGGCCCTTTGGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSICRLGR*ALWPEM
Trigger: CATCTCAGGCCAAAGGGCTCAGCGCCCCAGACGACA...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAAATTGTAGGCTACAGTaGGCTACCAGTGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALANCRLQ*ATSGVQ
Trigger: TTGCACACCACTGGTAGCTCACTGTAGCCTACAATT...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTCCCACAGCACCGGCATaGTGGGTAAGTCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIPTAPA*WVSPGL
Trigger: TAGGCCTGGACTTACCCATCATGCCGGTGCTGTGGG...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAATATACATATATGCATaGTGCTGTGCAAATGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAIYIYA*CCANAQ
Trigger: CTGGGCATTTGCACAGCATCATGCATATATGTATAT...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGGGCCTGAACATGAGATaGACAACACTCTTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQGLNMR*TTLFLG
Trigger: TCCCAAGAAGAGTGTTGTTCATCTCATGTTCAGGCC...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCGATGCCCACAGTGCATaGCGTTACCCGCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRDAHSA*RYPHRC
Trigger: ACACCTGTGCGGGTAACGTCATGCACTGTGGGCATC...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCTCGCGGGGGTGGTCATaGCGAAACCTATGGTTGACA +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVSRGWS*RNLWLT
Trigger: TGTCAACCATAGGTTTCGGCATGACCACCCCCGCGA...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAATCCAGTTGAGCACCTaGTTGATGAGGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAIQLST*LMRMEM
Trigger: CATCTCCATCCTCATCAAGCAGGTGCTCAACTGGAT...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCTCCGACAGCTGCTTCTaGAGCAGCGCCAGCGACACC +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSSDSCF*SSASDT
Trigger: GGTGTCGCTGGCGCTGCTGCAGAAGCAGCTGTCGGA...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGCATATGCTTTGGGGTTaGCGGCTGCTTCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLHMLWG*RLLLCM
Trigger: CATGCACAGAAGCAGCCGGCAACCCCAAAGCATATG...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGGAAGTAGCTGCCCTGTaGTCTGTGCTAAATGGACTA +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQEVAAL*SVLNGL
Trigger: TAGTCCATTTAGCACAGAGCACAGGGCAGCTACTTC...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCGGGGGATTCAAGATCTaGCGATCCGAGCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVGGFKI*RSEPGD
Trigger: ATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCC...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGAGAAGCTGGAGGGCTaGGCCCGGCAACCCCATGAT +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIEKLEG*ARQPHD
Trigger: ATCATGGGGTTGCCGGGCGCAGCCCTCCAGCTTCTC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCTGGTGGGTCACGCCGTaGCTGTATAAACTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVWWVTP*LYKLWH
Trigger: GTGCCAGAGTTTATACAGGCACGGCGTGACCCACCA...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCCCTGTCAGAGGGCCCTaGCCTAGAGAACACGTGCGC +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSPVRGP*PREHVR
Trigger: GCGCACGTGTTCTCTAGGGCAGGGCCCTCTGACAGG...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGTCCTCACTGTCTAGATaGCTCTATCATGGGGATCTC +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQSSLSR*LYHGDL
Trigger: GAGATCCCCATGATAGAGGCATCTAGACAGTGAGGA...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCTGGGTCAGGTACTCTaGAGATGTTTGCTGAGTATC +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQLGQVL*RCLLSI
Trigger: GATACTCAGCAAACATCTGCAGAGTACCTGACCCAG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCACAGGGTAACCAAATaGTTTTGCCCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPHRVTK*FCPGGG
Trigger: CCCACCCCCAGGGCAAAAGCATTTGGTTACCCTGTG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTCGGGAGGCAACATATaGCTGTCCCAACCCCCACCT +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALSGGNI*LSQPPP
Trigger: AGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCCTGCTGTACTGTTGCTaGGGCTCACTTCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVLLYCC*GSLPVG
Trigger: ACCCACAGGAAGTGAGCCCCAGCAACAGTACAGCAG...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGACTGGATTGGGGGATaGGGACAGGGGAACATAGGC +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALDWIGG*GQGNIG
Trigger: GCCTATGTTCCCCTGTCCCCATCCCCCAATCCAGTC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGACTGAGACTTTTCCTTaGGGAAAAGGGTTAGTAGCT +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWTETFP*GKGLVA
Trigger: AGCTACTAACCCTTTTCCCCAAGGAAAAGTCTCAGT...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACTATTTTCCAGGGTTTaGCTTGGGTTTGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALALFSRV*LGFGCW
Trigger: CCAGCATCCAAACCCAAGCCAAACCCTGGAAAATAG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGGAAGAGGGGGTCTGCTaGGAGGCCTGTCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: KNGPERGQEYNFLCPDSREEGVC*EACLKD
Trigger: GTCCTTCAGACAGGCCTCCCAGCAGACCCCCTCTTC...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAGACATCTTGCAATTGTaGAGGACTTTACACTTTTCG +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPADILQL*RTLHFS
Trigger: CGAAAAGTGTAAAGTCCTCCACAATTGCAAGATGTC...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCAACCTCCAGCATAAATaGGTTAAAACAAGACAAAAC +
Preference number: 4 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRNLQHK*VKTRQN
Trigger: GTTTTGTCTTGTTTTAACCCATTTATGCTGGAGGTT...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGTCACTAGCACTACCTTaGTCCACCCTGCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLSLALP*STLPSA
Trigger: AGCAGATGGCAGGGTGGACCAAGGTAGTGCTAGTGA...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTTCCCAGGCTCAGTGGTaGCACCACTGTCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLISQAQW*HHCLPG
Trigger: GCCAGGTAGACAGTGGTGCCACCACTGAGCCTGGGA...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTGGAGAGCCTGTTGGTTaGGGAGGGCAGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIGEPVG*GGQEEG
Trigger: TCCCTCTTCCTGCCCTCCCCAACCAACAGGCTCTCC...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGGGAAGCTCTCAAAAATaGACCAGAAAGGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQGSSQK*TRKGSG
Trigger: TCCTGACCCCTTTCTGGTCCATTTTTGAGAGCTTCC...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAAAGTTTCTCATGGGGTaGGGTATGTGTGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLKFLMG*GMCVEA
Trigger: AGCTTCAACACACATACCCCACCCCATGAGAAACTT...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGTGGACTGTGCAGTTCTaGAGAATGGTACTTTACTTG +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWWTVQF*RMVLYL
Trigger: CAAGTAAAGTACCATTCTCCAGAACTGCACAGTCCA...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTGAAGACAAGGCCACTTaGAGGCAGAGGAGACCACAG +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPEDKAT*RQRRPQ
Trigger: CTGTGGTCTCCTCTGCCTCCAAGTGGCCTTGTCTTC...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACCCTGCTTCTATAGTTaGCAACCAACATGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAPCFYS*QPTCPS
Trigger: GCTAGGACATGTTGGTTGCCAACTATAGAAGCAGGG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGCTGCATGGAGATGGGTaGAGTTATCTAAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWLHGDG*SYLKEQ
Trigger: CTGTTCTTTTAGATAACTCCACCCATCTCCATGCAG...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp GATTCTCTGTGGCCACAGTCATATGGTGAGGGCCTCTaGGAGTTCATTCAAACTTTAAGGGAGCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: DSLWPQSYGEGL*EFIQTLREPHS
Trigger: GCTGTGGGGCTCCCTTAAAGTTTGAATGAACTCCAAGAGGCCCTCACCATATGACTGTGGCCACAGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp GGCTTGCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTaGCTTTGTTTTACAAGGCCCTTCGCTATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GLPVSSGLGEKS*LCFTRPFAIWP
Trigger: GGGCCAGATAGCGAAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCACACGCCGAGCAGGATaGAGAGGAAGTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSTRRAG*RGSCPG
Trigger: GCCTGGGCAACTTCCTCTTCATCCTGCTCGGCGTGT...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTGTATCATGGCAGTGTaGCTGAGACTGGATTGGGGG +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSCIMAV*LRLDWG
Trigger: CCCCCAATCCAGTCTCAGTCACACTGCCATGATACA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCAATGTCACTGTTCCTaGAATGATGGGAGAACCACA +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQQCHCS*NDGRTT
Trigger: TGTGGTTCTCCCATCATTTCAGGAACAGTGACATTG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACTTCTGTGTGAAACCTaGATACATGCAAATTGTACA +
Preference number: 4 (lower is better)
Translates to: SLPPSPPYKVRSLESPPALLCET*IHANCT
Trigger: TGTACAATTTGCATGTATTCAGGTTTCACACAGAAG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTTGGAGCTTGTGCTTCTaGGTGGTCATGCTCAACAGG +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPWSLCF*VVMLNR
Trigger: CCTGTTGAGCATGACCACTCAGAAGCACAAGCTCCA...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGGCACTTATTCCTTCTTaGAACCCTTGTTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQALIPS*NPCFPW
Trigger: CCAAGGGAAACAAGGGTTTCAAGAAGGAATAAGTGC...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCAGGATCTGGAGCTCATaGAGTTTCTCATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVRIWSS*SFSWGG
Trigger: CCCACCCCATGAGAAACTTCATGAGCTCCAGATCCT...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAAGAGCCACGAAAAGTTaGACCATATGCTTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALARATKS*TICFGV
Trigger: AACCCCAAAGCATATGGTGCAACTTTTCGTGGCTCT...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGGAGAACCACATCCCTaGTTCAGGGAAGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALGEPHP*FREAVP
Trigger: AGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTCGCTCCTATGGTCTCTaGCTGACTGGGCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGRSYGL*LTGLPS
Trigger: AGACGGCAGCCCAGTCAGGCAGAGACCATAGGAGCG...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTGTCAGCAGGCTTGCTaGTCTCAGGCTCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALCQQAC*SQAQHG
Trigger: TCCATGCTGAGCCTGAGAGCAGCAAGCCTGCTGACA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCCCAGATGGCTGGTCCTaGTCCTCCCAGTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSPDGWS*SSQSME
Trigger: CTCCATGGACTGGGAGGAGCAGGACCAGCCATCTGG...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTCATGCCGAAACCTATaGTTGACACCACGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSSCRNL*LTPRCP
Trigger: TGGGCACCGTGGTGTCAACCATAGGTTTCGGCATGA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCTGACATTTGCAAGATaGCTTCTTTTGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQLTFAR*LLLGSW
Trigger: CCAGGAACCCAAAAGAAGCCATCTTGCAAATGTCAG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACCAATAGGCTGTGCATaGAGAAGACAAATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAPIGCA*RRQILL
Trigger: CAAGAGGATTTGTCTTCTCCATGCACAGCCTATTGG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGCTAATGGGTCTTGGCTaGAAGCTAACAGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLLMGLG*KLTGRP
Trigger: AGGCCTTCCTGTTAGCTTCCAGCCAAGACCCATTAG...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGTGCAAGTCTCTTATCTaGGGGTCTGGCTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQCKSLI*GSGLVN
Trigger: ATTTACCAAGCCAGACCCCCAGATAAGAGACTTGCA...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTCTTTGGTGTGCCCATaGCAGCCCAGAATGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALSLVCP*QPRMPG
Trigger: ACCAGGCATTCTGGGCTGCCATGGGCACACCAAAGA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGCACCACTGTCTACCTaGCTGCTTAGCCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALAPLST*LLSLRP
Trigger: AGGTCTCAGGCTAAGCAGCCAGGTAGACAGTGGTGC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGCCCTTAAGGATGCCCTaGAATTCAGGCTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLPLRMP*NSGFRI
Trigger: GATCCGAAAGCCTGAATTCCAGGGCATCCTTAAGGG...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTTGTGCAGATGGTACCTaGTGCAGGATTGTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPCADGT*CRIVVS
Trigger: GGACACCACAATCCTGCACCAGGTACCATCTGCACA...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCCCTGCTGTGTGCAGATaGTACCTGGTGCAGGATTGT +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVPAVCR*YLVQDC
Trigger: ACAATCCTGCACCAGGTACCATCTGCACACAGCAGG...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp GTCACGCCGTGCCTGTATAAACTCTGGCACCTGTCCTaGCCCTCATCATATATGAGAAAAATGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VTPCLYKLWHLS*PSSYMRKMGRE
Trigger: CTCTCTGCCCATTTTTCTCATATATGATGAGGGCAAGGACAGGTGCCAGAGTTTATACAGGCACGGCGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGGAGGACACAAAGGCCTaGCCACCTGGCTTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: KNGPERGQEYNFLCPDSREDTKA*PPGFSK
Trigger: CTTGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTC...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAATGCTGGCTTCTGTGTaGAACCTGAATACATGCAAA +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGMLASV*NLNTCK
Trigger: TTTGCATGTATTCAGGTTTCACACAGAAGCCAGCAT...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGTACACCACCATAATGTaGGTGTTCTGTGTTTACAGG +
Preference number: 4 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQYTTIM*VFCVYR
Trigger: CCTGTAAACACAGAACACTCACATTATGGTGGTGTA...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCAACTTCATCCCCAGCTaGCACTGTGGGAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSNFIPS*HCGKDP
Trigger: GGGGTCCTTCCCACAGTGTCAGCTGGGGATGAAGTT...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTATCTGTTAGAGTGGCTTaGATCTGTATCCTAACTTGT +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLSVRVA*ICILTC
Trigger: ACAAGTTAGGATACAGATTCAAGCCACTCTAACAGA...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCACTTAAGAGAGAGACATaGACTTTTACCAACGGAAGC +
Preference number: 4 (lower is better)
Translates to: WRHCFIQRTQRPDHLALALKRET*TFTNGS
Trigger: GCTTCCGTTGGTAAAAGTTCATGTCTCTCTCTTAAG...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGTTCAGAACCTCAGAGTaGCAGAGCCAAAAGACCAGT +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLFRTSE*QSQKTS
Trigger: ACTGGTCTTTTGGCTCTGTCACTCTGAGGTTCTGAA...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGTCTGCAGATGTTTGCTaGGTATCGTTCTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQSADVC*VSFLME
Trigger: TTCCATCAAGAACGATACTCAGCAAACATCTGCAGA...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACATTTGGGGTTGCCGGCTaGTTCTGTGCATGGGGACGG +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTFGVAG*FCAWGR
Trigger: CCGTCCCCATGCACAGAAGCAGCCGGCAACCCCAAA...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCTTTTGGGTTCCTGGTaGTGCAGGCCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSILLGSW*CRPWFP
Trigger: TGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCGCTGGGCGGGGGATTaGCTGGAGGTTTCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIRWAGD*LEVSLD
Trigger: GTCTAAAGAAACCTCCAGGCAATCCCCCGCCCAGCG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTGGGGCCAGGTCCGAGTaGAGAAATCCTCAATGCATG +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIGARSE*RNPQCM
Trigger: CATGCATTGAGGATTTCTGCACTCGGACCTGGCCCC...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTGTGGGAAGGACCCCATaGAGAAGCAATAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGVGRTP*RSNRAA
Trigger: GGCTGCCCTATTGCTTCTGCATGGGGTCCTTCCCAC...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCGTTCTTCCCACACACTaGTCCTCTGCCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSVLPTH*SSAWAT
Trigger: AGTGGCCCAGGCAGAGGAGCAGTGTGTGGGAAGAAC...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTGTCCACCCTGCCATCTaGTTTCCTCCTCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGVHPAI*FPPPLL
Trigger: CAGGAGTGGAGGAGGAAAGCAGATGGCAGGGTGGAC...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGCATATTACAGAGAGATaGCCACAGTGCATGACGTTA +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQHITER*PQCMTL
Trigger: TAACGTCATGCACTGTGGGCATCTCTCTGTAATATG...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTAGCAGCACTGTGACCTaGCCACGAGAAGAAGGATTT +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSSSTVT*PREEGF
Trigger: AAATCCTTCTTCTCGTGGGCAGGTCACAGTGCTGCT...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCGACTGTGGCATGACGTaGTGGAGTCACGATTCTGTC +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRDCGMT*WSHDSV
Trigger: GACAGAATCGTGACTCCAGCACGTCATGCCACAGTC...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTAGGTGGCCTGCTGTGTaGAGATGGTACCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGRWPAV*RWYLVQ
Trigger: CTGCACCAGGTACCATCTGCACACAGCAGGCCACCT...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTAGAAGCTGTGCATACTaGTGGGTCACGCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIRSCAY*WVTPCL
Trigger: CAGGCACGGCGTGACCCACCAGTATGCACAGCTTCT...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGGGCACTCACTGGGCTaGCCTGACAGTCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIGHSLG*PDSHSE
Trigger: TTCACTGTGACTGTCAGGCCAGCCCAGTGAGTGCCC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGACTCTGGATTCTCTGTaGCCACAGTCATATGGTGAG +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLTLDSL*PQSYGE
Trigger: CTCACCATATGACTGTGGCCACAGAGAATCCAGAGT...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTTGCCTTCTCCAGGCCTaGAGGCACTGCTTCATTCAG +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLICLLQA*RHCFIQ
Trigger: CTGAATGAAGCAGTGCCTCCAGGCCTGGAGAAGGCA...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTGGTCCCTTGGTGCCCTaGGCTCTGTTTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIGPLVP*ALFHCC
Trigger: ACAACAGTGAAACAGAGCCCAGGGCACCAAGGGACC...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCAGGCCAATTGCTTGGTaGGAACCCCTCCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSRPIAW*EPLPHG
Trigger: ACCATGGGGGAGGGGTTCCCACCAAGCAATTGGCCT...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGTCACTCAGTGGCACTTaGCACTTATTCCTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQSLSGT*HLFLLE
Trigger: TTCAAGAAGGAATAAGTGCCAAGTGCCACTGAGTGA...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGATGCAGTTCTGGAGAATaGTACTTTACTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGCSSGE*YFTCPW
Trigger: CCAAGGACAAGTAAAGTACCATTCTCCAGAACTGCA...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTCTACCATCTGGCACCTaGGGTGGCAAGCCAACATGG +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGLPSGT*GGKPTW
Trigger: CCATGTTGGCTTGCCACCCCAGGTGCCAGATGGTAG...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTGTGGCATGACGTGCTaGAGTCACGATTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALCGMTC*SHDSVT
Trigger: GGTGACAGAATCGTGACTCCAGCACGTCATGCCACA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTTCAGCATTAGCTGGCTaGAGGTGGCCTGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGSALAG*RWPAVC
Trigger: GCACACAGCAGGCCACCTCCAGCCAGCTAATGCTGA...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGTCTCTGATGTCAGCTaGCTGCCAACACGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALVSDVS*LPTRQL
Trigger: CAACTGACGTGTTGGCAGCCAGCTGACATCAGAGAC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp AAAAATACACATGTGCCACTGGATCCTGAGCTGCCATaGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: KNTHVPLDPELP*YLGGLAFLWEV
Trigger: AACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTCAGGATCCAGTGGCACATGTGTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp TCAGTGGCACTTGGCACTTATTCCTTCTTGAAACCCTaGTTTCCCTTGGCTTTGTGGCATCCTGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SVALGTYSFLKP*FPLALWHPVLL
Trigger: CAAGAGCACAGGATGCCACAAAGCCAAGGGAAACAAGGGTTTCAAGAAGGAATAAGTGCCAAGTGCCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGGACTAACTCTGAGCTaGGAAAGGCCAGCTAAGCCC +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIGLTLS*ERPAKP
Trigger: GGGCTTAGCTGGCCTTTCTCAGCTCAGAGTTAGTCC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTCGCCCGGCAACCCCATaGTCTCTTAAAGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGRPATP*SLKGGK
Trigger: TTTTCCCCCTTTAAGAGATCATGGGGTTGCCGGGCG...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTCATTTTCCTGCCCCTTaGAACCATGCTTACCATTCC +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSHFPAP*NHAYHS
Trigger: GGAATGGTAAGCATGGTTTCAAGGGGCAGGAAAATG...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCTCATGGCAGTGTGACTaGGACTGGATTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSSWQCD*DWIGGW
Trigger: CCATCCCCCAATCCAGTCTCAGTCACACTGCCATGA...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTGCAAATCCTGGAGCATaGGGAAATTGTAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSANPGA*GNCRLQ
Trigger: CTGTAGCCTACAATTTCCTCATGCTCCAGGATTTGC...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCTCCACCCTACAAAGTaGGGAGCCTTGAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSILHPTK*GALSHH
Trigger: GTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGATCAGGGTCCCATATCCTCATaGAATGCCTCTTATAATTGT +
Preference number: 4 (lower is better)
Translates to: KERTVGGFKICRSEPGDQGPISS*NASYNC
Trigger: ACAATTATAAGAGGCATTTCATGAGGATATGGGACC...CTGATCTCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGACAGGCCTTAGAACTTaGAAGGAACCCAAGGATCAT +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLTGLRT*KEPKDH
Trigger: ATGATCCTTGGGTTCCTTTCAAGTTCTAAGGCCTGT...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTGGAGTGCAGTGGCATaGTCATGGCTCAATGAAACA +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSWSAVA*SWLNET
Trigger: TGTTTCATTGAGCCATGATCATGCCACTGCACTCCA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCTTCCAGGACTTACAGTaGGAAAGCGCCTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRFQDLQ*ESAFWE
Trigger: TTCCCAGAAGGCGCTTTCTCACTGTAAGTCCTGGAA...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGTGGGGTATGTGTGTTaGAGCTGCACCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIVGYVC*SCTFSR
Trigger: CCTGCTGAAGGTGCAGCTTCAACACACATACCCCAC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCCAATGGCTGTTTCTCTaGGAATGCGGAACCGTGATT +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVQWLFL*ECGTVI
Trigger: AATCACGGTTCCGCATTCTCAGAGAAACAGCCATTG...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGTCAGGGACCCCCTATaGTGCAGAAGGCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTVRDPL*CRRQVW
Trigger: CCAGACTTGCCTTCTGCAGCATAGGGGGTCCCTGAC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAATTCCTTTAGAAGATTaGTCAAGCTGCCTCCAATTG +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGIPLED*SSCLQL
Trigger: CAATTGGAGGCAGCTTGAGCAATCTTCTAAAGGAAT...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTATGATGCTGTGCAAATaGCCAGGGCTGTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALMMLCK*PGLSGI
Trigger: AATGCCAGACAGCCCTGGGCATTTGCACAGCATCAT...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCTCTTCTGGACTCAGATaGCCTAGGCTGGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSSSGLR*PRLAVW
Trigger: CCAGACAGCCAGCCTAGGGCATCTGAGTCCAGAAGA...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGTGCAGAAATCCTCAATaGATGAGACTAGCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLCRNPQ*MRLAWK
Trigger: CTTCCACGCTAGTCTCATGCATTGAGGATTTCTGCA...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGTCACCAAGGCTGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRSPRLE*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCAGCCTTGGTGA...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTCCTCATTACCTCCCTTaGTCTGCATGCTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIPHYLP*SACSSP
Trigger: AGGACTGGAGCATGCAGAGCAAGGGAGGTAATGAGG...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCTGCCTATTGGACTGTaGAGTTCTGGAGAATGGTAC +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPLPIGL*SSGEWY
Trigger: GTACCATTCTCCAGAACTGCACAGTCCAATAGGCAG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGTGCAGAAGGCAAGTCTaGGAGAATCTGTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRCRRQV*ENLSLS
Trigger: GCTGAGGGACAGATTCTCCCAGACTTGCCTTCTGCA...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCCTTTCAATGAAGCCTaGGTATCTGGCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALPFNEA*VSGLPP
Trigger: TGGAGGAAGGCCAGATACCCAGGCTTCATTGAAAGG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTAGAGATTTCACAGCATaGCTCCAGCTGGAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGRDFTA*LQLEAV
Trigger: CACCGCCTCCAGCTGGAGCCATGCTGTGAAATCTCT...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCACAGTCTTGATGCCTaGGTTTTAGGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPHSLDA*VLGCCT
Trigger: AGTACAGCAGCCTAAAACCCAGGCATCAAGACTGTG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGGGATTTTCCAGGCCCTaGTACATCTCTAGAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLGFSRP*YISREL
Trigger: TAACTCTCTAGAGATGTACCAGGGCCTGGAAAATCC...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCCTAGGCTGGCTGTCTaGCTGTGCTTTCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIPRLAV*LCFPDS
Trigger: ACTGTCTGGAAAGCACAGCCAGACAGCCAGCCTAGG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTAGCAATAGGGCAGCCTaGTCCCATATCCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPSNRAA*SHILMK
Trigger: TTTCATGAGGATATGGGACCAGGCTGCCCTATTGCT...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCACAAGGCCAATTGCTTaGTGGGAACCCCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSTRPIA*WEPLPH
Trigger: ATGGGGGAGGGGTTCCCACCAAGCAATTGGCCTTGT...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCATGTGACAAAGTTCTaGCCAGTGGCAAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALHVTKF*PVAREH
Trigger: GTGTTCCCTTGCCACTGGCCAGAACTTTGTCACATG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGACAAACTGTCTAAGCTaGGTCAGGTACTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLTNCLS*VRYSAD
Trigger: ATCTGCAGAGTACCTGACCCAGCTTAGACAGTTTGT...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACCGGAGAAGTACAGCTaGGTGAAGCACAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTPEKYS*VKHRAA
Trigger: GGCTGCTCTGTGCTTCACCCAGCTGTACTTCTCCGG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGTGCCCTCATCATATATaGGAAAAATGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLCPHHI*EKWAER
Trigger: TCTCTCTGCCCATTTTTCTCATATATGATGAGGGCA...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCCACAAAATGAGAGCCTaGGATTGCCTAAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRHKMRA*DCLSLL
Trigger: CAGAAGGCTTAGGCAATCTCAGGCTCTCATTTTGTG...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCAGTGGTGAGCTCTCATaGCCTGGTGTCTGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSSGELS*PGVCCL
Trigger: AAGGCAACAGACACCAGGTCATGAGAGCTCACCACT...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTAGAAGTACAGCTGGGTaGAGCACAGAGCAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGRSTAG*STEQPS
Trigger: ACTAGGCTGCTCTGTGCTTCACCCAGCTGTACTTCT...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGCAAAAATACACATGTaGCACTGGATCCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALAKIHM*HWILSC
Trigger: GCAGCTCAGGATCCAGTGGCACATGTGTATTTTTGC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTCAGGCCTGGAGGCACTaGTTCATTCAGAGGACACAA +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGQAWRH*FIQRTQ
Trigger: TTGTGTCCTCTGAATGAAGCAGTGCCTCCAGGCCTG...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTTGCATGCTCCAGTCCTaGAGAACTACACACAGTTCC +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLICMLQS*RTTHSS
Trigger: GGAACTGTGTGTAGTTCTGCAGGACTGGAGCATGCA...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTGCTAATGGGATGATGTaGCCTTGTACACCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGANGMM*PCTPTA
Trigger: GGCAGTGGGTGTACAAGGGCACATCATCCCATTAGC...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCGGAAAGAGATCTGCTTaGAGTCGGCCAGAGAGACAG +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSGKRSA*SRPERQ
Trigger: CTGTCTCTCTGGCCGACTGCAAGCAGATCTCTTTCC...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGACGTTGTAGACTTTTCTaGAGTGACAGAAATGTTCTA +
Preference number: 4 (lower is better)
Translates to: LVKERTVGGFKICRSEPGRCRLF*SDRNVL
Trigger: TAGAACATTTCTGTCACTGCAGAAAAGTCTACAACG...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGAGAGATGCCCACAGTaGATGACGTTACCCGCACAG +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTERCPQ*MTLPAQ
Trigger: CTGTGCGGGTAACGTCATGCACTGTGGGCATCTCTC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGTCCTGGTTCCTCCCATaGAGACCACGATTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRSWFLP*RPRFCV
Trigger: TACACAGAATCGTGGTCTCCATGGGAGGAACCAGGA...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCTTTCTTCTCTGGAGGTaGGTCCTGGTTCCTCCCATG +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSFLLWR*VLVPPM
Trigger: CATGGGAGGAACCAGGACCCACCTCCAGAGAAGAAA...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCTTAAAACCCCTCCACTaGCTTGCCAGTGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSLKPLH*LASVLR
Trigger: CCTGAGGACACTGGCAAGCCAGTGGAGGGGTTTTAA...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTATAATGTCCCCTCAGTaGCCTGAACATGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSIMSPQ*PEHEMN
Trigger: GTTCATCTCATGTTCAGGCCACTGAGGGGACATTAT...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTAAACAGGTTTACCACTaGGAGAGCCTGTTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIKQVYH*ESLLVG
Trigger: CCCAACCAACAGGCTCTCCCAGTGGTAAACCTGTTT...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGCCTGCTGCCAGAGCATaGCAGAGTAAATGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRPAARA*QSKCVS
Trigger: ACTCACACATTTACTCTGCCATGCTCTGGCAGCAGG...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTAAAAACTACCCTTCAATaGGTTTTCTGTTCATTACAG +
Preference number: 4 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLKTTLQ*VFCSLQ
Trigger: CTGTAATGAACAGAAAACCCATTGAAGGGTAGTTTT...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACCTGGTGCAGGATTGTaGTGTCCAGGTGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTPGAGL*CPGVSP
Trigger: AGGAGAGACACCTGGACACCACAATCCTGCACCAGG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp AAACTGTCTAAGCTGGGTCAGGTACTCTGCAGATGTTaGCTGAGTATCGTTCTTGATGGAAATCCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: KLSKLGQVLCRC*LSIVLDGNPRG
Trigger: TCCACGGGGATTTCCATCAAGAACGATACTCAGCAAACATCTGCAGAGTACCTGACCCAGCTTAGACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp GCTATCTCAACACCCCTACACTCTCACCGCACGTATTaGGTCAGCTATGAATATGACCAACTCTCGTCGTTT +
Preference number: 4 (lower is better)
Translates to: AISTPLHSHRTY*VSYEYDQLSSF
Trigger: AAACGACGAGAGTTGGTCATATTCATAGCTGACCAAATACGTGCGGTGAGAGTGTAGGGGTGTTGAGATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCCCACTATCCTTTCAATaGAGCCTGGGTATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSPLSFQ*SLGIWP
Trigger: AGGCCAGATACCCAGGCTTCATTGAAAGGATAGTGG...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTAGTCACAGTGAATCCTaGAAGCATGGTTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALSHSES*KHGFHR
Trigger: CCTGTGAAAACCATGCTTTCAGGATTCACTGTGACT...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTAGCTCTTTCTTGGCCTaGGGTTCAGAAGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSISSFLA*GSEEPA
Trigger: TGCAGGTTCTTCTGAACCTCAGGCCAAGAAAGAGCT...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTACACACTCACAGCCTaGGTAATTCACACCATCTTG +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALYTLTA*VIHTIL
Trigger: CAAGATGGTGTGAATTACTCAGGCTGTGAGTGTGTA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCAAAAGTTGCACCATATaGTTTGGGGTTGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSKSCTI*FGVAGC
Trigger: GCAGCCGGCAACCCCAAAGCATATGGTGCAACTTTT...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCAGTCCGCAAGTTGGTaGTATGTTTCATCTCATTGC +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALQSASW*YVSSHC
Trigger: GCAATGAGATGAAACATAGCACCAACTTGCGGACTG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGAGGCGGTGAGGCGGTaGTTTTCTAAGACTTCCTAT +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIEAVRR*FSKTSY
Trigger: ATAGGAAGTCTTAGAAAAGCACCGCCTCACCGCCTC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTAGAGGGGTGGCAGGCTaGATTTTATTCATCGTTAAT +
Preference number: 4 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSRGVAG*ILFIVN
Trigger: ATTAACGATGAATAAAATGCAGCCTGCCACCCCTCT...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTGGCCTCAGTAGAGTTTaGACTATTATTAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPGLSRV*TIIRAS
Trigger: ACTTGCCCTAATAATAGTGCAAACTCTACTGAGGCC...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTAGGGTTTCGACATGTTaGCTAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIRVSTC*LGWSRT
Trigger: AGTTCGAGACCAGCCTAGGCAACATGTCGAAACCCT...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCCTTTGTGGCATCCTGTaGTCTTGGTTTTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRLCGIL*SWFSPI
Trigger: TATGGGAGAAAACCAAGAGCACAGGATGCCACAAAG...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTTGTGTGGCTTGTGGCTaGCTATTGGACTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSICVACG*LLDCAV
Trigger: AACTGCACAGTCCAATAGGCAGCCACAAGCCACACA...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCAAGGCCTTTTACTTCTaGCCCTTAAGGATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSKAFYF*PLRMPW
Trigger: CCAGGGCATCCTTAAGGGGCAGAAGTAAAAGGCCTT...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTTTGTGTGCCTGCGCCTaGATATATGTATTTGGACCA +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALLCACA*IYVFGP
Trigger: TGGTCCAAATACATATATGCAGGCGCAGGCACACAA...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTCTAGGACACCCAGGGTaGCTTCTTTACCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSILGHPG*LLYLSP
Trigger: AGGAGAAAGGTAAAGAAGCCACCCTGGGTGTCCTAG...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCAAGGACGGAGGATCCTaGGTCAATTTAGCAGCTATT +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRKDGGS*VNLAAI
Trigger: AATAGCTGCTAAATTGACCCAGGATCCTCCGTCCTT...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTGTCTTAATCACTCAGTaGCACTTGGCACTTATTCCT +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPVLITQ*HLALIP
Trigger: AGGAATAAGTGCCAAGTGCCACTGAGTGATTAAGAC...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTAAGATAGAAAAGGAATaGAGGGCCGGAGAAGTACAG +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLIKIEKE*RAGEVQ
Trigger: CTGTACTTCTCCGGCCCTTCATTCCTTTTCTATCTT...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGAAGGTTGTTCAGGATaGGATGGGGGAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTEGCSG*DGGGEM
Trigger: CATTTCACCTCCCCCATCTCATCCTGAACAACCTTC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTGAAGATTGCTCAAGCTaGCTCCAATTGCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGEDCSS*LQLPLS
Trigger: GGAAAGAGGCAATTGGAGGCAGCTTGAGCAATCTTC...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACATTGTTTGAGAAACCCTaGAGGCTTGTCCCGCATGCT +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTLFEKP*RLVPHA
Trigger: AGCATGCGGGACAAGCCTGCAGGGTTTCTCAAACAA...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCTTCCTCCTCCACTCCTaGATTCTGAGTCATTTTCGG +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSFLLHS*ILSHFR
Trigger: CCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAA...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAACCCCAAACACATCATaGCCTCTGGAGCCAAATACC +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTTPNTS*PLEPNT
Trigger: GGTATTTGGCTCCAGAGGCCATGATGTGTTTGGGGT...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCCTTCAAGTCCTCTCTTaGAATGCTGCTCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVLQVLS*NAAQKN
Trigger: ATTTTTCTGAGCAGCATTCCAAGAGAGGACTTGAAG...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCTAGCGTTCCCTTATTaGAACACTAAGTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: ASVLRIRRKVFALFYKALLAFPY*NTKSVR
Trigger: TCTCACAGACTTAGTGTTCCAATAAGGGAACGCTAG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCAATGTTGGTCTAGCCTaGGTCATTGTTATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRNVGLA*VIVMSS
Trigger: AGAGCTCATAACAATGACCCAGGCTAGACCAACATT...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCGGCATCCTGTGCTCTTaGTTTTCTCCCATATCTCTG +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSGILCS*FSPISL
Trigger: CAGAGATATGGGAGAAAACCAAGAGCACAGGATGCC...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGAACAACACTCTTCTTaGGAGTACCAGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIEQHSS*EYQPCL
Trigger: CAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTTC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTACAATACCAAACGAATaGACAGGACAGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSITIPNE*TGQSCG
Trigger: CCCACAGCTCTGTCCTGTCCATTCGTTTGGTATTGT...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp ACTTATTCCTTCTTGAAACCCTTGTTTCCCTTGGCTTaGTGGCATCCTGTGCTCTTGGTTTTCTCCCATATC +
Preference number: 4 (lower is better)
Translates to: TYSFLKPLFPLA*WHPVLLVFSHI
Trigger: GATATGGGAGAAAACCAAGAGCACAGGATGCCACAAAGCCAAGGGAAACAAGGGTTTCAAGAAGGAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp ACTGTGCAGTTCTGGAGAATGGTACTTTACTTGTCCTaGGGGAAGCAGAAACAAATGAAAACGAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: TVQFWRMVLYLS*GKQKQMKTRIW
Trigger: CCAGATCCTCGTTTTCATTTGTTTCTGCTTCCCCAAGGACAAGTAAAGTACCATTCTCCAGAACTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCCAGGATTCTAAATGCTaGGGAGGTAATTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSQDSKC*GGNSEP
Trigger: TGGCTCTGAATTACCTCCTCAGCATTTAGAATCCTG...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTATGTATTTGGACCAATaGTCTCATGTGTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPMYLDQ*SHVCKY
Trigger: GTATTTGCACACATGAGAGCATTGGTCCAAATACAT...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTAATGGAGCTCTTTCTTaGCCTGAGGTTCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGNGALS*PEVQKN
Trigger: GTTCTTCTGAACCTCAGGCCAAGAAAGAGCTCCATT...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCCTCACCGCACGTATTTaGTCAGCTATGAATATGACC +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSLTARI*SAMNMT
Trigger: GGTCATATTCATAGCTGACCAAATACGTGCGGTGAG...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp CAGAAAGCAAACAGCTCAGAGGGGTGGCAGGCTGCATTTTATTCATCGTTAATTAATAGATGTATTGTTTaGGAAACCCTGCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QKANSSEGWQAAFYSSLINRCIV*ETLQAC
Trigger: ACAAGCCTGCAGGGTTTCTCAAACAATACATCTATT...AATTAACGATGAATAAAATGCAGCCTGCCACCCCTCTGAGCTGTTTGCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGTGGCTATTGAACACTTaGAATGGGGTTAGTGCAATT +
Preference number: 4 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRWLLNT*NGVSAI
Trigger: AATTGCACTAACCCCATTTCAAGTGTTCAATAGCCA...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCACACCTCTAATTGGATaGCTTTTAATCGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRTPLIG*LLIVPF
Trigger: AAAGGGAACGATTAAAAGGCATCCAATTAGAGGTGT...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTATAATTGTGACATCTTaGAATTGTGGAGGACTTTAC +
Preference number: 4 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPIIVTS*NCGGLY
Trigger: GTAAAGTCCTCCACAATTGCAAGATGTCACAATTAT...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTTCATTTCCCTCTGTCTaGAGAGTCAAGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSISFPSV*RVKQIF
Trigger: GAAGATTTGCTTGACTCTGCAGACAGAGGGAAATGA...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACTGGGAACTTCACAATaGCTAAAGTGTGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTLGTSQ*LKCANG
Trigger: CCCATTAGCACACTTTAGCCATTGTGAAGTTCCCAG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTCTCATTTTGCTGACATaGAAAAGGAAACTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGLILLT*KRKLRG
Trigger: CCCACGAAGTTTCCTTTTCCATGTCAGCAAAATGAG...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp ATTTCCAAATCTGGGGGAAATGCCACAGTCCGCAAGTaGGTGCTATGTTTCATCTCATTGCATAATACTACA +
Preference number: 4 (lower is better)
Translates to: ISKSGGNATVRK*VLCFISLHNTT
Trigger: TGTAGTATTATGCAATGAGATGAAACATAGCACCAACTTGCGGACTGTGGCATTTCCCCCAGATTTGGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACATTTCTCCCATATCTCTaGCCCTCTTTCCTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTFLPYL*PSFLSL
Trigger: AAGACTAAGGAAAGAGGGTCAGAGATATGGGAGAAA...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTTTCTGCCAAGGTCACTaGTATTTCCCTTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: AILGRGADKMVYRRNRSIFCQGH*YFPLLN
Trigger: ATTTAGCAAAGGGAAATATCAGTGACCTTGGCAGAA...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR GCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCGAATATAACTTTCTCTaGCCAGATTCCAGGACTTAC +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSEYNFL*PDSRTY
Trigger: GTAAGTCCTGGAATCTGGGCAGAGAAAGTTATATTC...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTACATTTCCCTCAAAATaGAGCAGGAAGCTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGTFPSK*SRKLSK
Trigger: TTTTGAGAGCTTCCTGCTCCATTTTGAGGGAAATGT...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTTCTTGTTTTATCATTTaGTGTCATGAAAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGSCFII*CHESPC
Trigger: GCAGGGACTTTCATGACATCAAATGATAAAACAAGA...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR TCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTCACTGGAGTGTCATATaGAATGTTATAGGAATCACA +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGHWSVI*NVIGIT
Trigger: TGTGATTCCTATAACATTTCATATGACACTCCAGTG...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAATTACCCAAAATAGCTaGAGAGTCACTGAGATCTCA +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTITQNS*RVTEIS
Trigger: TGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAAT...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACATCTTTCTTCTTAAAGTaGCCCAGACTGAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTSFFLK*PRLRLF
Trigger: GAAAAGTCTCAGTCTGGGCCACTTTAAGAAGAAAGA...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTCTGCATATATGTATTTaGACCAATGCTCTCATGTGT +
Preference number: 4 (lower is better)
Translates to: SLAWFMATFPDYLAAILGLHICI*TNALMC
Trigger: ACACATGAGAGCATTGGTCCAAATACATATATGCAG...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
3UTR CAA 72 bp TCTTTCCAGAAACACTGTAAGCCAGTGTTTCTCAGATaGCTGGGTGTAATTCATAGGCAGATCATGAAATCA +
Preference number: 4 (lower is better)
Translates to: SFQKHCKPVFLR*LGVIHRQIMKS
Trigger: TGATTTCATGATCTGCCTATGAATTACACCCAGCAATCTGAGAAACACTGGCTTACAGTGTTTCTGGAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CCA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCCAGACAGTGTGTATGTaGAATTGTGCTTTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SEITQNSWRVTEISGKLSQTVCM*NCAFCF
Trigger: AAAACAAAAAGCACAATTCCACATACACACTGTCTG...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS TCA 90 bp GGAGGAAGGCGCGCAGCTCTGGCTCGGCCACGCCGTGCGCAGCGCTaGAGTTGCGCAGCGTGGCGCCCCAGCGCGCCCGCGCCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: GGRRAALARPRRAQR*SCAAWRPSAPAPPP
Trigger: AGGCGGAGGCGCGGGCGCGCTGGGGCGCCACGCTGCGCAACTTCAGCGCTGCGCACGGCGTGGCCGAGCCAGAGCTGCGCGCCTTCCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS TCA 90 bp GGGACGCGGCAGCAAGGCGTGGAGAGAGCCCCCGGGGGCGTCCCATaGGGCGTTCGGGATCGGCGCCTCCTAGGTGCGGGCTGTGCGGGC +
Preference number: 5 (lower is better)
Translates to: GTRQQGVERAPGGVP*GVRDRRLLGAGCAG
Trigger: GCCCGCACAGCCCGCACCTAGGAGGCGCCGATCCCGAACGCCTCATGGGACGCCCCCGGGGGCTCTCTCCACGCCTTGCTGCCGCGTCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS CCA 90 bp GCCGTGGATCCCGGGCGCCTAGGACCGGGACGCGGCAGCAAGGCGTaGAGAGAGCCCCCGGGGGCGTCCCATGAGGCGTTCGGGATCGGC +
Preference number: 5 (lower is better)
Translates to: AVDPGRLGPGRGSKA*REPPGASHEAFGIG
Trigger: GCCGATCCCGAACGCCTCATGGGACGCCCCCGGGGGCTCTCTCCACGCCTTGCTGCCGCGTCCCGGTCCTAGGCGCCCGGGATCCACGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS CCA 90 bp GGCGGCCAGCGCGGCCTCGTAGTGCCGGAGGAAGGCGCGCAGCTCTaGCTCGGCCACGCCGTGCGCAGCGCTGAAGTTGCGCAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: GGQRGLVVPEEGAQL*LGHAVRSAEVAQRG
Trigger: GCCACGCTGCGCAACTTCAGCGCTGCGCACGGCGTGGCCGAGCCAGAGCTGCGCGCCTTCCTCCGGCACTACGAGGCCGCGCTGGCCGCC
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS GCA 90 bp ATGAGCGCCGCCAGCAGCACGAAGCGGCCGGTGTCCTCGTTGAGGTaGGAACGGCGGCAGCAGCAGCAGCAGCAGGAGGGGCGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: MSAASSTKRPVSSLR*ERRQQQQQQEGRGR
Trigger: CCTGCCGCGCCCCTCCTGCTGCTGCTGCTGCTGCCGCCGTTCGCACCTCAACGAGGACACCGGCCGCTTCGTGCTGCTGGCGGCGCTCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS-3UTR CAA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCCAGCGGCAGCTCAGCTaGCGCAGCATCCAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAQRQLS*RSIQLS
Trigger: GCTCAACTGGATGCTGCGCAAGCTGAGCTGCCGCTG...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACGGCCGGTGTCCTCGTaGAGGTGCGAACGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SLPPSPPYKVRSLESPPARPVSS*RCERRQ
Trigger: CTGCCGCCGTTCGCACCTCAACGAGGACACCGGCCG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTCTCGGCCAGCCGGTaGTTCATGATGCCCAGCGCG +
Preference number: 5 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEVSASR*FMMPSA
Trigger: CGCGCTGGGCATCATGAACAACCGGCTGGCCGAGAC...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCCTCACTAGCACTACCTaGGTCCACCCTGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: GFLVLQALVPKDAAGRGALTSTT*VHPAIC
Trigger: GCAGATGGCAGGGTGGACCAAGGTAGTGCTAGTGAG...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS GCA 90 bp AGAAAGGGCAGAGTCGGGGATCAGGACGGTCATGCAGGCTGGCACTaGCCAGGGGCTGATCTTCCAGGAGCTGGGCTAGCAAGCTCGGGA +
Preference number: 5 (lower is better)
Translates to: RKGRVGDQDGHAGWH*PGADLPGAGLASSG
Trigger: TCCCGAGCTTGCTAGCCCAGCTCCTGGAAGATCAGCCCCTGGGCAGTGCCAGCCTGCATGACCGTCCTGATCCCCGACTCTGCCCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS-3UTR CAA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAACCGTTCTGGCGCGTGTaGACGCACACGCTGCGCGGG +
Preference number: 5 (lower is better)
Translates to: LKENLLGATVLQEGTHKEPFWRV*THTLRG
Trigger: CCCGCGCAGCGTGTGCGTCAACACGCGCCAGAACGG...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCCAGGGTCTTGGAAGGTaGTTCAGGATGAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAQGLGR*FRMRWG
Trigger: CCCCCATCTCATCCTGAACAACCTTCCAAGACCCTG...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS CCA 90 bp TTTGGCAGAAAGGGCAGAGTCGGGGATCAGGACGGTCATGCAGGCTaGCACTGCCCAGGGGCTGATCTTCCAGGAGCTGGGCTAGCAAGC +
Preference number: 5 (lower is better)
Translates to: FGRKGRVGDQDGHAG*HCPGADLPGAGLAS
Trigger: GCTTGCTAGCCCAGCTCCTGGAAGATCAGCCCCTGGGCAGTGCCAGCCTGCATGACCGTCCTGATCCCCGACTCTGCCCTTTCTGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS-3UTR CAA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGAGCGCCAGCGACACCTaGTTGGAGGCCGTGAGGTCG +
Preference number: 5 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWSASDT*LEAVRS
Trigger: CGACCTCACGGCCTCCAACAAGGTGTCGCTGGCGCT...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCCTCTGGCACCTGTCCTaGCCCTCATCATATATGAGA +
Preference number: 5 (lower is better)
Translates to: GFLVLQALVPKDAAGRGALWHLS*PSSYMR
Trigger: TCTCATATATGATGAGGGCAAGGACAGGTGCCAGAG...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCTCCTTGTCAGCAGGCTaGCTGCTCTCAGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRSLSAG*LLSGSA
Trigger: TGCTGAGCCTGAGAGCAGCAAGCCTGCTGACAAGGA...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGCACTCTTCCTGCTCCTaGTCAGCAGGCTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEHSSCS*SAGLLL
Trigger: GAGCAGCAAGCCTGCTGACAAGGAGCAGGAAGAGTG...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGCCAGCGACACCTTGTaGGAGGCCGTGAGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: LVKERTVGGFKICRSEPGASDTL*EAVRSR
Trigger: GCGCGACCTCACGGCCTCCAACAAGGTGTCGCTGGC...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCTCGGGCACAGCCAGGTaGGATCCATCTCCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: STHICQGERFHSMAPAGGSGTAR*DPSPSP
Trigger: GGGACTGGGAGATGGATCCAACCTGGCTGTGCCCGA...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCTTTCCAGGGTTTGGCTaGGGTTTGGATGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRFPGFG*GLDAGF
Trigger: GAAGCCAGCATCCAAACCCAAGCCAAACCCTGGAAA...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TTCTATATATATACATCGGGAGGCAACATATGGCTGTCCCAACCCCCACCTGTCTGCGCAGCGCTGAAGTaGCGCAGCGTGGCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: FYIYTSGGNIWLSQPPPVCAALK*RSVAPQ
Trigger: CTGGGGCGCCACGCTGCGCAACTTCAGCGCTGCGCA...GACAGGTGGGGGTTGGGACAGCCATATGTTGCCTCCCGATGTATATATATAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGTGCCGTACTTTACTTGTCCTaGGGGAAGCAGAAACAAATG +
Preference number: 5 (lower is better)
Translates to: GFLVLQALVPKDAAGRGAVLYLS*GKQKQM
Trigger: CATTTGTTTCTGCTTCCCCAAGGACAAGTAAAGTAC...GGCACCTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS GCA 90 bp GACAACCTAGAAGGTGATAGGGGGTCTTCTCCGAGACATGTGCTCTaGTGGCTCTTTGGCAGAAAGGGCAGAGTCGGGGATCAGGACGGT +
Preference number: 5 (lower is better)
Translates to: DNLEGDRGSSPRHVL*WLFGRKGRVGDQDG
Trigger: ACCGTCCTGATCCCCGACTCTGCCCTTTCTGCCAAAGAGCCAGCAGAGCACATGTCTCGGAGAAGACCCCCTATCACCTTCTAGGTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS-3UTR CAA 90 bp TCCACGCACATTTGCCAGGGAGAGAGATTTCACAGCATGGCTCCAGCTGGAGGCCAGGGTTTCGACATGTaGCCTAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: STHICQGERFHSMAPAGGQGFDM*PRLVSN
Trigger: GTTCGAGACCAGCCTAGGCAACATGTCGAAACCCTG...GCCTCCAGCTGGAGCCATGCTGTGAAATCTCTCTCCCTGGCAAATGTGCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS CCA 90 bp AACCTAGAAGGTGATAGGGGGTCTTCTCCGAGACATGTGCTCTGCTaGCTCTTTGGCAGAAAGGGCAGAGTCGGGGATCAGGACGGTCAT +
Preference number: 5 (lower is better)
Translates to: NLEGDRGSSPRHVLC*LFGRKGRVGDQDGH
Trigger: ATGACCGTCCTGATCCCCGACTCTGCCCTTTCTGCCAAAGAGCCAGCAGAGCACATGTCTCGGAGAAGACCCCCTATCACCTTCTAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS-3UTR CAA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCACAGAGCCACGAAAAGTaGCACCATATGCTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAQSHEK*HHMLWG
Trigger: ACCCCAAAGCATATGGTGCAACTTTTCGTGGCTCTG...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAACGCTGGGCGGGGGATaGCCTGGAGGTTTCTTTAGA +
Preference number: 5 (lower is better)
Translates to: WRHCFIQRTQRPDHLALATLGGG*PGGFFR
Trigger: TCTAAAGAAACCTCCAGGCAATCCCCCGCCCAGCGT...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACCAGAAGCTTCTCCTTaGGCCATGAGGGCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLPEASP*AMRAQS
Trigger: TGACTGAGCCCTCATGGCCAAAGGAGAAGCTTCTGG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGGAAGGGGAAGAGGGTTaGGGGCCAGGTCCGAGTGCA +
Preference number: 5 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLEGEEG*GPGPSA
Trigger: TGCACTCGGACCTGGCCCCAAACCCTCTTCCCCTTC...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTTTTGGGTTCCTGGTGCTGCAGGCCCTGGTTCCCAAGGACGCAGCTGGCAGAGGGCTCTGTTTCACTGTaGTTTTGTAGAGCAACTTCC +
Preference number: 5 (lower is better)
Translates to: LLGSWCCRPWFPRTQLAEGSVSL*FCRATS
Trigger: GGAAGTTGCTCTACAAAACAACAGTGAAACAGAGCC...CTCTGCCAGCTGCGTCCTTGGGAACCAGGGCCTGCAGCACCAGGAACCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GATGGGAGAACCACATCCCTGCTTCAGGGAAGCAGTCCCTGTCGTCTGGGGCGCTCTCCCTGCTACTTCTaGCTACTAGTAACATGGATG +
Preference number: 5 (lower is better)
Translates to: DGRTTSLLQGSSPCRLGRSPCYF*LLVTWM
Trigger: CATCCATGTTACTAGTAGCAAGAAGTAGCAGGGAGA...GCGCCCCAGACGACAGGGACTGCTTCCCTGAAGCAGGGATGTGGTTCTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS TCA 90 bp TTTGGGTCAGAGACTCCACAAGGGCTGACCCTCCTTGCGGTTCTCTaGAGACACTGTAGAAACCCGTGGGAAGCTCTGCTGTATTGCTGG +
Preference number: 5 (lower is better)
Translates to: FGSETPQGLTLLAVL*RHCRNPWEALLYCW
Trigger: CCAGCAATACAGCAGAGCTTCCCACGGGTTTCTACAGTGTCTTCAGAGAACCGCAAGGAGGGTCAGCCCTTGTGGAGTCTCTGACCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS-3UTR CAA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAGCCACAGTCCGCAAGTaGGTGCTATGTTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: LKENLLGATVLQEGTHKEATVRK*VLCFIS
Trigger: TGAGATGAAACATAGCACCAACTTGCGGACTGTGGC...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGAGCAAGATGGCTTCTTTaGGGTTCCTGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LVKERTVGGFKICRSEPGARWLL*GSWCCR
Trigger: CCTGCAGCACCAGGAACCCAAAAGAAGCCATCTTGC...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAGTGTTCCACGCACATTaGCCAGGGAGAGAGATTTCA +
Preference number: 5 (lower is better)
Translates to: LKENLLGATVLQEGTHKEVFHAH*PGREIS
Trigger: TGAAATCTCTCTCCCTGGCAAATGTGCGTGGAACAC...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAACTGAAAAGAAGGGGTTaGCAAAGCCAACCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: LKENLLGATVLQEGTHKELKRRG*QSQPRQ
Trigger: TTGCCTGGGTTGGCTTTGCAAACCCCTTCTTTTCAG...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTGAAGGAGAATCTGCTGGGGGCCACGGTTCTCCAAGAGGGGACTCACAAGGAAAAACCCTTGTTTCCCTaGGCTTTGTGGCATCCTGTG +
Preference number: 5 (lower is better)
Translates to: LKENLLGATVLQEGTHKEKPLFP*ALWHPV
Trigger: CACAGGATGCCACAAAGCCAAGGGAAACAAGGGTTT...TTCCTTGTGAGTCCCCTCTTGGAGAACCGTGGCCCCCAGCAGATTCTCCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TGGAGGCACTGCTTCATTCAGAGGACACAAAGGCCTGACCACCTGGCTTTAGCAGGGAAAGAGATCTGCTaGCAGTCGGCCAGAGAGACA +
Preference number: 5 (lower is better)
Translates to: WRHCFIQRTQRPDHLALAGKEIC*QSARET
Trigger: TGTCTCTCTGGCCGACTGCAAGCAGATCTCTTTCCC...TGCTAAAGCCAGGTGGTCAGGCCTTTGTGTCCTCTGAATGAAGCAGTGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS CCA 90 bp AAACCCGTGGGAAGCTCTGCTGTATTGCTGGGTGCTCCTGTTCTGTaGCAAGACAACCTAGAAGGTGATAGGGGGTCTTCTCCGAGACAT +
Preference number: 5 (lower is better)
Translates to: KPVGSSAVLLGAPVL*QDNLEGDRGSSPRH
Trigger: ATGTCTCGGAGAAGACCCCCTATCACCTTCTAGGTTGTCTTGCCACAGAACAGGAGCACCCAGCAATACAGCAGAGCTTCCCACGGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS-3UTR CAA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGACAGTTGAGCACCTGCTaGATGAGGATGGAGATGACG +
Preference number: 5 (lower is better)
Translates to: LVKERTVGGFKICRSEPGQLSTC*MRMEMT
Trigger: CGTCATCTCCATCCTCATCAAGCAGGTGCTCAACTG...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGCTGTCTTTCTCACCCTaGTCTCTCCAGCCCCTAACA +
Preference number: 5 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQLSFSP*SLQPLT
Trigger: TGTTAGGGGCTGGAGAGACAAGGGTGAGAAAGACAG...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGATCATACTACCCTCATaGTCACCCCTCAGAGGTCCC +
Preference number: 5 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQIILPS*SPLRGP
Trigger: GGGACCTCTGAGGGGTGACAATGAGGGTAGTATGAT...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGGGGAGAGCCTGTTGGTaGGGGAGGGCAGGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRGRACW*GRAGRG
Trigger: CCCTCTTCCTGCCCTCCCCAACCAACAGGCTCTCCC...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGCCAATCCCCTCCCCCTaGCTGTCCTCTTGTACAGAG +
Preference number: 5 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLPIPSP*LSSCTE
Trigger: CTCTGTACAAGAGGACAGCAAGGGGGAGGGGATTGG...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS GCA 90 bp TCCTTGCGGTTCTCTGAAGACACTGTAGAAACCCGTGGGAAGCTCTaGTGTATTGCTGGGTGCTCCTGTTCTGTGGCAAGACAACCTAGA +
Preference number: 5 (lower is better)
Translates to: SLRFSEDTVETRGKL*CIAGCSCSVARQPR
Trigger: TCTAGGTTGTCTTGCCACAGAACAGGAGCACCCAGCAATACAGCAGAGCTTCCCACGGGTTTCTACAGTGTCTTCAGAGAACCGCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS-3UTR CAA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGTCAAGCTGCCTCCAATaGCCTCTTTCCAAAACCAAA +
Preference number: 5 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWSSCLQ*PLSKTK
Trigger: TTTGGTTTTGGAAAGAGGCAATTGGAGGCAGCTTGA...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGGGCACTTATTCCTTCTaGAAACCCTTGTTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWGTYSF*KPLFPL
Trigger: CAAGGGAAACAAGGGTTTCAAGAAGGAATAAGTGCC...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTGTTGCACCATATGCTTaGGGGTTGCCGGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSVAPYA*GLPAAS
Trigger: AGAAGCAGCCGGCAACCCCAAAGCATATGGTGCAAC...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGATCCTGAGCTGCCATaGTACCTTGGAGGACTGGCG +
Preference number: 5 (lower is better)
Translates to: ASVLRIRRKVFALFYKALDPELP*YLGGLA
Trigger: CGCCAGTCCTCCAAGGTACAATGGCAGCTCAGGATC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGATGGCATCCTGTGCTCTaGGTTTTCTCCCATATCTCT +
Preference number: 5 (lower is better)
Translates to: LVKERTVGGFKICRSEPGWHPVL*VFSHIS
Trigger: AGAGATATGGGAGAAAACCAAGAGCACAGGATGCCA...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGATCCTTCTTGAAACCCTaGTTTCCCTTGGCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: LVKERTVGGFKICRSEPGSFLKP*FPLALW
Trigger: CCACAAAGCCAAGGGAAACAAGGGTTTCAAGAAGGA...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GAGCTGCCATTGTACCTTGGAGGACTGGCGTTTCTCTGGGAAGTTGGGAGGTGGCCTGCATATATGTATTaGGACCAATGCTCTCATGTG +
Preference number: 5 (lower is better)
Translates to: ELPLYLGGLAFLWEVGRWPAYMY*DQCSHV
Trigger: CACATGAGAGCATTGGTCCAAATACATATATGCAGG...CCACCTCCCAACTTCCCAGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCCCTCCCTCCCTCTCCACCCTACAAAGTGAGGAGCCTTGAGTCACCACCAGCAAAATGGGGTAGGTCTTaGAAAACCAACAGATTGCAA +
Preference number: 5 (lower is better)
Translates to: SLPPSPPYKVRSLESPPAKWGRS*KTNRLQ
Trigger: TTGCAATCTGTTGGTTTTCAAAGACCTACCCCATTT...TGCTGGTGGTGACTCAAGGCTCCTCACTTTGTAGGGTGGAGAGGGAGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCCCATATGCTTTGGGGTaGCCGGCTGCTTCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRPYALG*PAASVH
Trigger: ATGCACAGAAGCAGCCGGCAACCCCAAAGCATATGG...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTAGCTGCCATTGTACCTaGGAGGACTGGCGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPSCHCT*EDWRFS
Trigger: AGAGAAACGCCAGTCCTCCAAGGTACAATGGCAGCT...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCGGGTTTGGCTTGGGTTaGGATGCTGGCTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRGFGLG*DAGFCV
Trigger: CACACAGAAGCCAGCATCCAAACCCAAGCCAAACCC...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGACCTTCAAGTCCTCTCTaGGAATGCTGCTCAGAAAAA +
Preference number: 5 (lower is better)
Translates to: LVKERTVGGFKICRSEPGPSSPL*ECCSEK
Trigger: TTTTTCTGAGCAGCATTCCAAGAGAGGACTTGAAGG...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTTGGGAGTACCAGCCTaGCTTGGTTCATGGCCACTT +
Preference number: 5 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSLGVPA*LGSWPL
Trigger: AAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTGCTATTTTCCAGGGTTaGGCTTGGGTTTGGATGCTG +
Preference number: 5 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSAIFQG*AWVWML
Trigger: CAGCATCCAAACCCAAGCCAAACCCTGGAAAATAGC...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCGACTCACAAGGCCAATaGCTTGGTGGGAACCCCTCC +
Preference number: 5 (lower is better)
Translates to: SEITQNSWRVTEISGKLSDSQGQ*LGGNPS
Trigger: GGAGGGGTTCCCACCAAGCAATTGGCCTTGTGAGTC...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTTTGTTTCCCTTGGCTTaGTGGCATCCTGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSLFPLA*WHPVLL
Trigger: CAAGAGCACAGGATGCCACAAAGCCAAGGGAAACAA...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGAGTACCAGCCTTGCTaGGTTCATGGCCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: ASVLRIRRKVFALFYKALEYQPC*VHGHFS
Trigger: GGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGGTAACCAAATGCTTTaGCCCTGGGGGTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AILGRGADKMVYRRNRSIGNQML*PWGWER
Trigger: CCTCTCCCACCCCCAGGGCAAAAGCATTTGGTTACC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTGTGATTAATCCAGCCTaGATGGGGAGGCAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: ASVLRIRRKVFALFYKALVINPA*MGRQQE
Trigger: TTCCTGCTGCCTCCCCATCAAGGCTGGATTAATCAC...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGTCCACCCCCTCCAATTaGTGTAAGGCCAGGGGACTT +
Preference number: 5 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRSTPSN*CKARGL
Trigger: AAGTCCCCTGGCCTTACACAAATTGGAGGGGGTGGA...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GGTGGGGTATGTGTGTTGAAGCTGCACCTTCAGCAGGAACCTGGCCAGTCCTTACTGAATACATGCAAATaGTACATAAAACTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: GGVCVLKLHLQQEPGQSLLNTCK*YIKLPQ
Trigger: TTGGGGGAGTTTTATGTACAATTTGCATGTATTCAG...TAAGGACTGGCCAGGTTCCTGCTGAAGGTGCAGCTTCAACACACATACCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp CTTGTGAAAGAAAGGACGGTTGGGGGATTCAAGATCTGCCGATCCGAGCCTGGATGTGACATCTTGCAATaGTGGAGGACTTTACACTTT +
Preference number: 5 (lower is better)
Translates to: LVKERTVGGFKICRSEPGCDILQ*WRTLHF
Trigger: AAAGTGTAAAGTCCTCCACAATTGCAAGATGTCACA...TCCAGGCTCGGATCGGCAGATCTTGAATCCCCCAACCGTCCTTTCTTTCACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACCCTCATTACCTCCCTaGCTCTGCATGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTPSLPP*LCMLQS
Trigger: GGACTGGAGCATGCAGAGCAAGGGAGGTAATGAGGG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TTACCTTTCTCCTCAGCTCTGAGAAGGCTGCTAGCCAAGACTCTGGATTCTCTGCGAAAAGTCTTTGCTTaGTTTTACAAGGCCCTTCGC +
Preference number: 5 (lower is better)
Translates to: LPFSSALRRLLAKTLDSLRKVFA*FYKALR
Trigger: GCGAAGGGCCTTGTAAAACAAAGCAAAGACTTTTCG...CAGAGAATCCAGAGTCTTGGCTAGCAGCCTTCTCAGAGCTGAGGAGAAAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCAGAAATTACCCAAAATAGCTGGAGAGTCACTGAGATCTCAGGTAAGCTTTCCGGTGGGGTATGTGTGTaGAAGCTGCACCTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: SEITQNSWRVTEISGKLSGGVCV*KLHLQQ
Trigger: CTGCTGAAGGTGCAGCTTCAACACACATACCCCACC...GGAAAGCTTACCTGAGATCTCAGTGACTCTCCAGCTATTTTGGGTAATTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTATAGCTGTGTGTGGCTaGTGGCTGCCTATTGGACTG +
Preference number: 5 (lower is better)
Translates to: SLAWFMATFPDYLAAILGIAVCG*WLPIGL
Trigger: CAGTCCAATAGGCAGCCACAAGCCACACACAGCTAT...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp ACCCTGCCATCTGCTTTCCTCCTCCACTCCTGCATTCTGAGTCATTTTCGGCAGAAGGATATCTGGCTTTaGCTTGAATTAGCTAGTGAA +
Preference number: 5 (lower is better)
Translates to: TLPSAFLLHSCILSHFRQKDIWL*LELASE
Trigger: TTCACTAGCTAATTCAAGCAAAAGCCAGATATCCTT...CTGCCGAAAATGACTCAGAATGCAGGAGTGGAGGAGGAAAGCAGATGGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGCAAATCTTCCATTTTTaGTTCCCCTGCTGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRQIFHF*FPCCQS
Trigger: GCTCTGGCAGCAGGGGAACAAAAAATGGAAGATTTG...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACCCCTTGCTGTCCTCTaGTACAGAGGACTGAAAGCA +
Preference number: 5 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTPLAVL*YRGLKA
Trigger: TGCTTTCAGTCCTCTGTACAAGAGGACAGCAAGGGG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGCTAAAGTGATCCACTaGTCTCAGCCTCCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTAKVIH*SQPPKV
Trigger: CACTTTGGGAGGCTGAGACAAGTGGATCACTTTAGC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCTTAGGCGAAAAGTCTTaGCTTTGTTTTACAAGGCCC +
Preference number: 5 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRLGEKS*LCFTRP
Trigger: GGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAA...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp TCATGTGACTCTCTTCTGGTCAATGAGATGCAGCAGAAAGTCCTAGGGAGGTCTGTAATTCACACCATCTaGATGCTGAGAACTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SCDSLLVNEMQQKVLGRSVIHTI*MLRTSK
Trigger: TTTGGAAGTTCTCAGCATCAAGATGGTGTGAATTAC...AGACCTCCCTAGGACTTTCTGCTGCATCTCATTGACCAGAAGAGAGTCACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp AACAACACTCTTCTTGGGAGTACCAGCCTTGCTTGGTTCATGGCCACTTTTCCTCTACATAGATTATGCTaGCACTCACTCTTAAGAGAG +
Preference number: 5 (lower is better)
Translates to: NNTLLGSTSLAWFMATFPLHRLC*HSLLRE
Trigger: CTCTCTTAAGAGTGAGTGCAAGCATAATCTATGTAG...AGGAAAAGTGGCCATGAACCAAGCAAGGCTGGTACTCCCAAGAAGAGTGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp AAAAATGGACCAGAAAGGGGTCAGGAATATAACTTTCTCTGCCCAGATTCCAGGTCTCACCGCACGTATTaGGTCAGCTATGAATATGAC +
Preference number: 5 (lower is better)
Translates to: KNGPERGQEYNFLCPDSRSHRTY*VSYEYD
Trigger: GTCATATTCATAGCTGACCAAATACGTGCGGTGAGA...CCTGGAATCTGGGCAGAGAAAGTTATATTCCTGACCCCTTTCTGGTCCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp ACCAGCACATTATACAACAATACAAGAACCCTGCAACAGATAAAGCCCCAGCGCAGGGGAAAGAAGAGTTaGACATTCAAGTTTGACTCT +
Preference number: 5 (lower is better)
Translates to: TSTLYNNTRTLQQIKPQRRGKKS*TFKFDS
Trigger: AGAGTCAAACTTGAATGTCAAACTCTTCTTTCCCCT...GCGCTGGGGCTTTATCTGTTGCAGGGTTCTTGTATTGTTGTATAATGTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GCAATTTTAGGTAGAGGAGCAGACAAGATGGTGTACAGGAGAAACAGGTCTATTGAATTAGCTAGTGAATaGCTGTGTGGCCTCCTTACT +
Preference number: 5 (lower is better)
Translates to: AILGRGADKMVYRRNRSIELASE*LCGLLT
Trigger: AGTAAGGAGGCCACACAGCAATTCACTAGCTAATTC...AATAGACCTGTTTCTCCTGTACACCATCTTGTCTGCTCCTCTACCTAAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp AGCCTTGCTTGGTTCATGGCCACTTTTCCTGATTATCTTGCAGCTATATTAGGTGTACTCTGCAGATGTTaGCTGAGTATCGTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: SLAWFMATFPDYLAAILGVLCRC*LSIVLD
Trigger: ATCAAGAACGATACTCAGCAAACATCTGCAGAGTAC...ACCTAATATAGCTGCAAGATAATCAGGAAAAGTGGCCATGAACCAAGCAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GCCAGTGTCCTCAGGATTAGGCGAAAAGTCTTTGCTTTGTTTTACAAGGCCCTTCAACCTCATGAGGTTTaGCTTTGTGTCTTAATTACA +
Preference number: 5 (lower is better)
Translates to: ASVLRIRRKVFALFYKALQPHEV*LCVLIT
Trigger: TGTAATTAAGACACAAAGCAAAACCTCATGAGGTTG...AAGGGCCTTGTAAAACAAAGCAAAGACTTTTCGCCTAATCCTGAGGACACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACACATTCCTTTAGAAGATaGCTCAAGCTGCCTCCAATT +
Preference number: 5 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTHSFRR*LKLPPI
Trigger: AATTGGAGGCAGCTTGAGCAATCTTCTAAAGGAATG...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS-3UTR CAA 90 bp GTCAGCTATGAATATGACCAACTCTCGTCGTTTATCTCTATTCAGTGGAACACAGCCAAATTTCCAAGATaGGCCAGGGGATTAAATAAG +
Preference number: 5 (lower is better)
Translates to: VSYEYDQLSSFISIQWNTAKFPR*ARGLNK
Trigger: CTTATTTAATCCCCTGGCCAATCTTGGAAATTTGGC...TGTGTTCCACTGAATAGAGATAAACGACGAGAGTTGGTCATATTCATAGCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS TCA 72 bp CGCGCAGCTCTGGCTCGGCCACGCCGTGCGCAGCGCTaGAGTTGCGCAGCGTGGCGCCCCAGCGCGCCCGCG +
Preference number: 6 (lower is better)
Translates to: RAALARPRRAQR*SCAAWRPSAPA
Trigger: CGCGGGCGCGCTGGGGCGCCACGCTGCGCAACTTCAGCGCTGCGCACGGCGTGGCCGAGCCAGAGCTGCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS CCA 72 bp CCCGGGCGCCTAGGACCGGGACGCGGCAGCAAGGCGTaGAGAGAGCCCCCGGGGGCGTCCCATGAGGCGTTC +
Preference number: 6 (lower is better)
Translates to: PGRLGPGRGSKA*REPPGASHEAF
Trigger: GAACGCCTCATGGGACGCCCCCGGGGGCTCTCTCCACGCCTTGCTGCCGCGTCCCGGTCCTAGGCGCCCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS GCA 72 bp CGTCCCATGAGGCGTTCGGGATCGGCGCCTCCTAGGTaGGGGCTGTGCGGGCAGTCCTGCTCCCGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: RPMRRSGSAPPR*GLCGQSCSRPR
Trigger: CCGGGGGCGGGAGCAGGACTGCCCGCACAGCCCGCACCTAGGAGGCGCCGATCCCGAACGCCTCATGGGACG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS GCA 72 bp CGGAGGAAGGCGCGCAGCTCTGGCTCGGCCACGCCGTaGGCAGCGCTGAAGTTGCGCAGCGTGGCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: RRKARSSGSATP*AALKLRSVAPQ
Trigger: CTGGGGCGCCACGCTGCGCAACTTCAGCGCTGCGCACGGCGTGGCCGAGCCAGAGCTGCGCGCCTTCCTCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS TCA 72 bp CAGCAAGGCGTGGAGAGAGCCCCCGGGGGCGTCCCATaGGGCGTTCGGGATCGGCGCCTCCTAGGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: QQGVERAPGGVP*GVRDRRLLGAG
Trigger: GCCCGCACCTAGGAGGCGCCGATCCCGAACGCCTCATGGGACGCCCCCGGGGGCTCTCTCCACGCCTTGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS CCA 72 bp CGCGGCCTCGTAGTGCCGGAGGAAGGCGCGCAGCTCTaGCTCGGCCACGCCGTGCGCAGCGCTGAAGTTGCG +
Preference number: 6 (lower is better)
Translates to: RGLVVPEEGAQL*LGHAVRSAEVA
Trigger: CGCAACTTCAGCGCTGCGCACGGCGTGGCCGAGCCAGAGCTGCGCGCCTTCCTCCGGCACTACGAGGCCGCG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS CAA 90 bp GGCGGACGGGCGGTCTACCTGGAGGCGCTGGTCTCGGCCAGCCGGTaGTTCATGATGCCCAGCGCGCCCACGCCGCCCGAGAAGCCGTTC +
Preference number: 6 (lower is better)
Translates to: GGRAVYLEALVSASR*FMMPSAPTPPEKPF
Trigger: GAACGGCTTCTCGGGCGGCGTGGGCGCGCTGGGCATCATGAACAACCGGCTGGCCGAGACCAGCGCCTCCAGGTAGACCGCCCGTCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS TCA 72 bp GCGCCGCCAGCAGCACGAAGCGGCCGGTGTCCTCGTTaGGGTGCGAACGGCGGCAGCAGCAGCAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: APPAARSGRCPR*GANGGSSSSSR
Trigger: CCTGCTGCTGCTGCTGCTGCCGCCGTTCGCACCTCAACGAGGACACCGGCCGCTTCGTGCTGCTGGCGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS TCA 72 bp GGATGGTCCCAGCGCAGCCGAACAGCCCGTAGGCGATaGGGAAGGCCTTCCCGCCCACCGTCGCGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: GWSQRSRTARRR*GRPSRPPSRGW
Trigger: CCACCCCCGCGACGGTGGGCGGGAAGGCCTTCCTCATCGCCTACGGGCTGTTCGGCTGCGCTGGGACCATCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS TCA 72 bp CGCCCACGCCGCCCGAGAAGCCGTTCTGGCGCGTGTTaGCGCACACGCTGCGCGGGTAGCCGTTGGCCGTCT +
Preference number: 6 (lower is better)
Translates to: RPRRPRSRSGAC*RTRCAGSRWPS
Trigger: AGACGGCCAACGGCTACCCGCGCAGCGTGTGCGTCAACACGCGCCAGAACGGCTTCTCGGGCGGCGTGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS GCA 72 bp GCCAGCAGCACGAAGCGGCCGGTGTCCTCGTTGAGGTaGGAACGGCGGCAGCAGCAGCAGCAGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: ASSTKRPVSSLR*ERRQQQQQQEG
Trigger: CCCCTCCTGCTGCTGCTGCTGCTGCCGCCGTTCGCACCTCAACGAGGACACCGGCCGCTTCGTGCTGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS CAA 72 bp AGCGCCGCCAGCAGCACGAAGCGGCCGGTGTCCTCGTaGAGGTGCGAACGGCGGCAGCAGCAGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: SAASSTKRPVSS*RCERRQQQQQQ
Trigger: CTGCTGCTGCTGCTGCTGCCGCCGTTCGCACCTCAACGAGGACACCGGCCGCTTCGTGCTGCTGGCGGCGCT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS TCA 72 bp AGAAGACTGTGGCACCCGCCACCAGGTAGAGGCCGATaGGCGCCGCCAGCAGCACGAAGCGGCCGGTGTCCT +
Preference number: 6 (lower is better)
Translates to: RRLWHPPPGRGR*APPAARSGRCP
Trigger: AGGACACCGGCCGCTTCGTGCTGCTGGCGGCGCTCATCGGCCTCTACCTGGTGGCGGGTGCCACAGTCTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327876.5
ENST00000493527.1
CDS CAA 72 bp GCCGGGCAGCAGCGCGCGCAGCAGCGGCAGCTCAGCTaGCGCAGCATCCAGTTGAGCACCTGCTTGATGAGG +
Preference number: 6 (lower is better)
Translates to: AGQQRAQQRQLS*RSIQLSTCLMR
Trigger: CCTCATCAAGCAGGTGCTCAACTGGATGCTGCGCAAGCTGAGCTGCCGCTGCTGCGCGCGCTGCTGCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS CAA 90 bp GCGCCAGGAGCCGGGCAGCAGCGCGCGCAGCAGCGGCAGCTCAGCTaGCGCAGCATCCAGTTGAGCACCTGCTTGATGAGGATGGAGATG +
Preference number: 6 (lower is better)
Translates to: APGAGQQRAQQRQLS*RSIQLSTCLMRMEM
Trigger: CATCTCCATCCTCATCAAGCAGGTGCTCAACTGGATGCTGCGCAAGCTGAGCTGCCGCTGCTGCGCGCGCTGCTGCCCGGCTCCTGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327876.5
CDS CCA 72 bp GCTGATCTTCCAGGAGCTGGGCTAGCAAGCTCGGGATaGGGGATGGGTCATTCCCTCCTTCTCCCCACTGTC +
Preference number: 6 (lower is better)
Translates to: ADLPGAGLASSG*GMGHSLLLPTV
Trigger: GACAGTGGGGAGAAGGAGGGAATGACCCATCCCCCATCCCGAGCTTGCTAGCCCAGCTCCTGGAAGATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS CCA 72 bp GGTGATAGGGGGTCTTCTCCGAGACATGTGCTCTGCTaGCTCTTTGGCAGAAAGGGCAGAGTCGGGGATCAG +
Preference number: 6 (lower is better)
Translates to: GDRGSSPRHVLC*LFGRKGRVGDQ
Trigger: CTGATCCCCGACTCTGCCCTTTCTGCCAAAGAGCCAGCAGAGCACATGTCTCGGAGAAGACCCCCTATCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS TCA 72 bp GAGACTCCACAAGGGCTGACCCTCCTTGCGGTTCTCTaGAGACACTGTAGAAACCCGTGGGAAGCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: ETPQGLTLLAVL*RHCRNPWEALL
Trigger: CAGCAGAGCTTCCCACGGGTTTCTACAGTGTCTTCAGAGAACCGCAAGGAGGGTCAGCCCTTGTGGAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS GCA 72 bp GAAGGTGATAGGGGGTCTTCTCCGAGACATGTGCTCTaGTGGCTCTTTGGCAGAAAGGGCAGAGTCGGGGAT +
Preference number: 6 (lower is better)
Translates to: EGDRGSSPRHVL*WLFGRKGRVGD
Trigger: ATCCCCGACTCTGCCCTTTCTGCCAAAGAGCCAGCAGAGCACATGTCTCGGAGAAGACCCCCTATCACCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS CCA 72 bp GGAAGCTCTGCTGTATTGCTGGGTGCTCCTGTTCTGTaGCAAGACAACCTAGAAGGTGATAGGGGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: GSSAVLLGAPVL*QDNLEGDRGSS
Trigger: AGAAGACCCCCTATCACCTTCTAGGTTGTCTTGCCACAGAACAGGAGCACCCAGCAATACAGCAGAGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS GCA 72 bp TTCTCTGAAGACACTGTAGAAACCCGTGGGAAGCTCTaGTGTATTGCTGGGTGCTCCTGTTCTGTGGCAAGA +
Preference number: 6 (lower is better)
Translates to: FSEDTVETRGKL*CIAGCSCSVAR
Trigger: TCTTGCCACAGAACAGGAGCACCCAGCAATACAGCAGAGCTTCCCACGGGTTTCTACAGTGTCTTCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493527.1
CDS TCA 72 bp CTGAGGCTCAGAAAAGTGCAGTGTGAGGTCACTTTGTaGATAAGTCATAGAGGTAATGTCAGAATTTGGGTC +
Preference number: 6 (lower is better)
Translates to: LRLRKVQCEVTL*ISHRGNVRIWV
Trigger: GACCCAAATTCTGACATTACCTCTATGACTTATTCACAAAGTGACCTCACACTGCACTTTTCTGAGCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493527.1