RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNK10 (Homo sapiens)

Ensembl gene IDs: ENSG00000100433

Ensembl transcript IDs: ENST00000312350.9, ENST00000319231.10, ENST00000340700.9, ENST00000556282.1

Found 913 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGTCTGTGACTCTGGGATGGGAAGGAGGCCAGAGGCTGGCATGTaGGGTGGTTTGCATATCACTTCTAGGCACCACTGCACCTTCTCC +
Preference number: 1 (lower is better)
Translates to: PVCDSGMGRRPEAGM*GGLHITSRHHCTFS
Trigger: GGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAAACCACCTCACATGCCAGCCTCTGGCCTCCTTCCCATCCCAGAGTCACAGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp TTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTaGCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATG +
Preference number: 1 (lower is better)
Translates to: FQEAGLRNSCPCLRV*PGSTAQGYSTATEM
Trigger: CATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp ACTCTGGGATGGGAAGGAGGCCAGAGGCTGGCATGTGAGGTGGTTTaGATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTC +
Preference number: 1 (lower is better)
Translates to: TLGWEGGQRLACEVV*ISLLGTTAPSPFKL
Trigger: GAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAAACCACCTCACATGCCAGCCTCTGGCCTCCTTCCCATCCCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp AAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTaGCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTAC +
Preference number: 1 (lower is better)
Translates to: KRHTCFFQEAGLRNS*PCLRVCPGSTAQGY
Trigger: GTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp GTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTaGCCTCTTGGTGGTGGAGATTCCACCATATCTGCTCCCCACATC +
Preference number: 1 (lower is better)
Translates to: VCRGNPLSHVYTKTL*PLGGGDSTISAPHI
Trigger: GATGTGGGGAGCAGATATGGTGGAATCTCCACCACCAAGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 90 bp GATTTATCATCATTGTCACTGGGTCCCCTGTCTGTGACTCTGGGATaGGAAGGAGGCCAGAGGCTGGCATGTGAGGTGGTTTGCATATCA +
Preference number: 1 (lower is better)
Translates to: DLSSLSLGPLSVTLG*EGGQRLACEVVCIS
Trigger: TGATATGCAAACCACCTCACATGCCAGCCTCTGGCCTCCTTCCCATCCCAGAGTCACAGACAGGGGACCCAGTGACAATGATGATAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp TCTGTAAAAGGTAGCAGTGAGCCTAGAACACCCATAACCAGCAACTaGCTGGTGTTGCCAGGTCCAAATGCTTTCACGTGTGGCCCAAAG +
Preference number: 1 (lower is better)
Translates to: SVKGSSEPRTPITSN*LVLPGPNAFTCGPK
Trigger: CTTTGGGCCACACGTGAAAGCATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACTGCTACCTTTTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp CCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTaGGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGATGTC +
Preference number: 1 (lower is better)
Translates to: PKAAISSGVCVCVYV*VCVCVCVCERERDV
Trigger: GACATCTCTCTCTCTCTCACACACACACACACACACACACACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp TTTTTGAGAAATGGGCAGGGACAGGTCTTCCATGGTACCAGTGGTTaGGGATGTCGTGGGTACAACTTTCCCTGGAGGTCAGAAAGCATG +
Preference number: 1 (lower is better)
Translates to: FLRNGQGQVFHGTSG*GCRGYNFPWRSESM
Trigger: CATGCTTTCTGACCTCCAGGGAAAGTTGTACCCACGACATCCTCAACCACTGGTACCATGGAAGACCTGTCCCTGCCCATTTCTCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp TTCCTACGCCTTTCCCGTGGTTCAGAAACCCTGGTACACACTGGATaGTTCATATTCTCACCAAATCCAGTGGGTAAAAACCAGCCCCAC +
Preference number: 1 (lower is better)
Translates to: FLRLSRGSETLVHTG*FIFSPNPVGKNQPH
Trigger: GTGGGGCTGGTTTTTACCCACTGGATTTGGTGAGAATATGAAGCATCCAGTGTGTACCAGGGTTTCTGAACCACGGGAAAGGCGTAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 90 bp CCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTaGTGTGTCCTGCGTTTGCTATCTGAAATGAAGTTCTTGTTCTCT +
Preference number: 1 (lower is better)
Translates to: PLTCTARTGYVHGHS*CVLRLLSEMKFLFS
Trigger: AGAGAACAAGAACTTCATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp AGAACTGAGGTTTACATGGAGTATGGATGGGTTGGTGAAGTCCAATaGAGGTATGGTGCAGAGACAGAGGACAGGGCTTTGCTTACAGCC +
Preference number: 1 (lower is better)
Translates to: RTEVYMEYGWVGEVQ*RYGAETEDRALLTA
Trigger: GGCTGTAAGCAAAGCCCTGTCCTCTGTCTCTGCACCATACCTTCATTGGACTTCACCAACCCATCCATACTCCATGTAAACCTCAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 90 bp AACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATGCTTTCACGTGTaGCCCAAAGAGCTAGCTGTGAACCAGCCAATTATGATAAAGACT +
Preference number: 1 (lower is better)
Translates to: NQQLPGVARSKCFHV*PKELAVNQPIMIKT
Trigger: AGTCTTTATCATAATTGGCTGGTTCACAGCTAGCTCTTTGGGCCACACGTGAAAGCATTTGGACCTGGCAACACCAGGCAGTTGCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp AGACAGCCCCCACTGAAGATGGTGGACGTGTGCTCTTTCTTTGTGTaGAATCGAAACATTTCTCCTAGGTTTATGCTGGAATGGGAGTGC +
Preference number: 1 (lower is better)
Translates to: RQPPLKMVDVCSFFV*NRNISPRFMLEWEC
Trigger: GCACTCCCATTCCAGCATAAACCTAGGAGAAATGTTTCGATTTCACACAAAGAAAGAGCACACGTCCACCATCTTCAGTGGGGGCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp GAGACACCTCTCATTTCTCCTCAATGCCACTGCACTGATGTCAACTaGCTTAGGGCAGGCATGAGAGAACTGAGGTTTACATGGAGTATG +
Preference number: 1 (lower is better)
Translates to: ETPLISPQCHCTDVN*LRAGMRELRFTWSM
Trigger: CATACTCCATGTAAACCTCAGTTCTCTCATGCCTGCCCTAAGTCAGTTGACATCAGTGCAGTGGCATTGAGGAGAAATGAGAGGTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp CACACACACACACACACACACACACACACACACTCTATACAGCCCTaGCCCAAAGTGATAAATATCACTGTTGGGTTAGGACTGGGTATG +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTHSIQP*PKVINITVGLGLGM
Trigger: CATACCCAGTCCTAACCCAACAGTGATATTTATCACTTTGGGGCAGGGCTGTATAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 90 bp AAACCCTGGTACACACTGGATGCTTCATATTCTCACCAAATCCAGTaGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTA +
Preference number: 1 (lower is better)
Translates to: KPWYTLDASYSHQIQ*VKTSPTQTLVTFSL
Trigger: TAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCACTGGATTTGGTGAGAATATGAAGCATCCAGTGTGTACCAGGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp TTTCCCACCCCCAGCCCAAGGTTATGTTTGATCCCTCTGTGTGACTaGTTTGACTCATTTGGGGAAGCATCTATGCACATACCAACACAT +
Preference number: 1 (lower is better)
Translates to: FPTPSPRLCLIPLCD*FDSFGEASMHIPTH
Trigger: ATGTGTTGGTATGTGCATAGATGCTTCCCCAAATGAGTCAAATCAGTCACACAGAGGGATCAAACATAACCTTGGGCTGGGGGTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp AGATCTAGGCAGAGAACTGATGCACCCACAATCACAGGCTATGACTaGTGGAACACAAATAGTCCTAGTTACCTTAGTAACAGGCCAGAG +
Preference number: 1 (lower is better)
Translates to: RSRQRTDAPTITGYD*WNTNSPSYLSNRPE
Trigger: CTCTGGCCTGTTACTAAGGTAACTAGGACTATTTGTGTTCCAGCAGTCATAGCCTGTGATTGTGGGTGCATCAGTTCTCTGCCTAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 90 bp TGGATAAATGAGAGGGAAGCCTCTGCCAGATTTGGCCGTAGGGCCTaGAATTTTAACACACTGCTACAAAGAACGTACCAGATAACACAG +
Preference number: 1 (lower is better)
Translates to: WINEREASARFGRRA*NFNTLLQRTYQITQ
Trigger: CTGTGTTATCTGGTACGTTCTTTGTAGCAGTGTGTTAAAATTCCAGGCCCTACGGCCAAATCTGGCAGAGGCTTCCCTCTCATTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 90 bp TCTAGGCAGAGAACTGATGCACCCACAATCACAGGCTATGACTGCTaGAACACAAATAGTCCTAGTTACCTTAGTAACAGGCCAGAGATG +
Preference number: 1 (lower is better)
Translates to: SRQRTDAPTITGYDC*NTNSPSYLSNRPEM
Trigger: CATCTCTGGCCTGTTACTAAGGTAACTAGGACTATTTGTGTTCCAGCAGTCATAGCCTGTGATTGTGGGTGCATCAGTTCTCTGCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 90 bp CTTTGGTCAGACTTTGAATACCAGCTCTACCACTTTCTTGCTGTGTaGCATTGGATAAATAACATAGCTTCCCTGAGCCTCTGTGTCCTT +
Preference number: 1 (lower is better)
Translates to: LWSDFEYQLYHFLAV*HWINNIASLSLCVL
Trigger: AAGGACACAGAGGCTCAGGGAAGCTATGTTATTTATCCAATGGCACACAGCAAGAAAGTGGTAGAGCTGGTATTCAAAGTCTGACCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 90 bp ATCAGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTaGCCTTTAACCACGCAGCAGTTGATGTCATGTTTTCACCACTGC +
Preference number: 1 (lower is better)
Translates to: ISLLSPLHPLRKMHD*PLTTQQLMSCFHHC
Trigger: GCAGTGGTGAAAACATGACATCAACTGCTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp CCAAATCAGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATaGTTGGCCTTTAACCACGCAGCAGTTGATGTCATGTTTTCACCA +
Preference number: 1 (lower is better)
Translates to: PNQFIVTIAPTEENA*LAFNHAAVDVMFSP
Trigger: TGGTGAAAACATGACATCAACTGCTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACTGATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 90 bp TCAGACTTTGAATACCAGCTCTACCACTTTCTTGCTGTGTGCCATTaGATAAATAACATAGCTTCCCTGAGCCTCTGTGTCCTTGTGTAT +
Preference number: 1 (lower is better)
Translates to: SDFEYQLYHFLAVCH*INNIASLSLCVLVY
Trigger: ATACACAAGGACACAGAGGCTCAGGGAAGCTATGTTATTTATCCAATGGCACACAGCAAGAAAGTGGTAGAGCTGGTATTCAAAGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp AGAAAGACACACATACACACAAACACACACAATCACAAGGATGCATaGCACAGACACTGTAGTGAAGTTGAAAGCAGACTTTGGTCAGAC +
Preference number: 1 (lower is better)
Translates to: RKTHIHTNTHNHKDA*HRHCSEVESRLWSD
Trigger: GTCTGACCAAAGTCTGCTTTCAACTTCACTACAGTGTCTGTGTCATGCATCCTTGTGATTGTGTGTGTTTGTGTGTATGTGTGTCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp CCTTGTGTATATAATGGGTTTGCAAATACTTCCCACATAGTGTCGTaGAGTTTCAATGAGCTGACGTTCATAAAGTGCCTAATCCTGTGC +
Preference number: 1 (lower is better)
Translates to: PCVYNGFANTSHIVS*SFNELTFIKCLILC
Trigger: GCACAGGATTAGGCACTTTATGAACGTCAGCTCATTGAAACTTCACGACACTATGTGGGAAGTATTTGCAAACCCATTATATACACAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp TTTGCACACATATTTAATCGATCAATCACCATAGAGGATCTTCTTTaGTTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGGG +
Preference number: 1 (lower is better)
Translates to: FAHIFNRSITIEDLL*FCSSHSWPNVSGNG
Trigger: CCCATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCTCTATGGTGATTGATCGATTAAATATGTGTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 90 bp GTTTCCCTATGCAGAATTAACAGCATCCACAATGCCACACTAAAGTaGTCTTTGTTTCAGAGAGTTACCCTTTTTCTTTTTAAGGCCATT +
Preference number: 1 (lower is better)
Translates to: VSLCRINSIHNATLK*SLFQRVTLFLFKAI
Trigger: AATGGCCTTAAAAAGAAAAAGGGTAACTCTCTGAAACAAAGATCACTTTAGTGTGGCATTGTGGATGCTGTTAATTCTGCATAGGGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 90 bp GGTATTTCTACCCCTCTTATCAAAACAAGTTATAACCAAAGTACATaGACATTTCCAAATCAGTTTATTGTCACCATTGCACCCACTGAG +
Preference number: 1 (lower is better)
Translates to: GISTPLIKTSYNQST*TFPNQFIVTIAPTE
Trigger: CTCAGTGGGTGCAATGGTGACAATAAACTGATTTGGAAATGTCCATGTACTTTGGTTATAACTTGTTTTGATAAGAGGGGTAGAAATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTaGTGCCCTCTTGGTGGTGGAGATTCCACCATATCTGCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: GVCRGNPLSHVYTKT*CPLGGGDSTISAPH
Trigger: GTGGGGAGCAGATATGGTGGAATCTCCACCACCAAGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTCCTTGTCTACGTGTGTaGCCAGGTAGCACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRPCLRV*PGSTAQ
Trigger: CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp TGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTCTACAGGATGTCACCAGTaGGCCTCATCTCCAGTCCAA +
Preference number: 2 (lower is better)
Translates to: CLQGQPFEPCLHKDLVPSTGCHQ*ASSPVQ
Trigger: TTGGACTGGAGATGAGGCTCACTGGTGACATCCTGT...AGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACGTGCACGGACACTCTTaGTGTGTCCTGCGTTTGCTA +
Preference number: 2 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDVHGHS*CVLRLL
Trigger: TAGCAAACGCAGGACACACCAAGAGTGTCCGTGCAC...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp AGGGCAGGCATGAGAGAACTGAGGTTTACATGGAGTATGGATGGGTaGGTGAAGTCCAATGAAGGTATGGTGCAGAGACAGAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: RAGMRELRFTWSMDG*VKSNEGMVQRQRTG
Trigger: CCCTGTCCTCTGTCTCTGCACCATACCTTCATTGGACTTCACCAACCCATCCATACTCCATGTAAACCTCAGTTCTCTCATGCCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp TGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTCTGTCCAATGGAGGAGTTaGCTTAGACCTTCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: CLQGQPFEPCLHKDLVPSVQWRS*LRPSLD
Trigger: GTCCAAGGAAGGTCTAAGTCAACTCCTCCATTGGAC...AGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGCCAGAACCGGCTACGTaGACGGACACTCTTGGTGTG +
Preference number: 2 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRPEPAT*TDTLGV
Trigger: CACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGG...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTCAAAAAGCCCTGAGATaGAAAGATGCCATGGTCCTC +
Preference number: 2 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPQKALR*KDAMVL
Trigger: GAGGACCATGGCATCTTTCCATCTCAGGGCTTTTTG...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp GCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTaGCTATCTGAAATGAAGTTCTTGTTCTCTGATTCCTTTTGGCAG +
Preference number: 2 (lower is better)
Translates to: ARTGYVHGHSWCVLR*LSEMKFLFSDSFWQ
Trigger: CTGCCAAAAGGAATCAGAGAACAAGAACTTCATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp TTCTCACTAGTCCTCAGAACCCAGCATGCAAATAGACAGGCAGCATaGACGAAGCCAGGAAATGATATCATCTCAGAGGGAGGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: FSLVLRTQHANRQAA*TKPGNDIISEGGKG
Trigger: CCCCTTGCCTCCCTCTGAGATGATATCATTTCCTGGCTTCGTCAATGCTGCCTGTCTATTTGCATGCTGGGTTCTGAGGACTAGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATCCTTGTCTACGTGTGTaGCCAGGTAGCACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNPCLRV*PGSTAQ
Trigger: CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp TTATTACTGAGTCGACACAGGATGTCACCAGTGAGCCTCATCTCCAGTCCAATGGTGCACGGACACTCTTaGTGTGTCCTGCGTTTGCTA +
Preference number: 2 (lower is better)
Translates to: LLLSRHRMSPVSLISSPMVHGHS*CVLRLL
Trigger: TAGCAAACGCAGGACACACCAAGAGTGTCCGTGCAC...CATTGGACTGGAGATGAGGCTCACTGGTGACATCCTGTGTCGACTCAGTAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp CACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGCAGTaGATGTCATGTTTTCACCACTGCTCGCCAGTTCATGTGGACTAC +
Preference number: 2 (lower is better)
Translates to: HPLRKMHDWPLTTQQ*MSCFHHCSPVHVDY
Trigger: GTAGTCCACATGAACTGGCGAGCAGTGGTGAAAACATGACATCAACTGCTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp TTATTACTGAGTCGACACAGGATGTCACCAGTGAGCCTCATCTCCAGTCCAATGGACTACCTACCCCTGTaGGAAAGACCAAACTCAGCA +
Preference number: 2 (lower is better)
Translates to: LLLSRHRMSPVSLISSPMDYLPL*ERPNSA
Trigger: TGCTGAGTTTGGTCTTTCTCACAGGGGTAGGTAGTC...CATTGGACTGGAGATGAGGCTCACTGGTGACATCCTGTGTCGACTCAGTAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCCCAGAACCGGCTACGTaGACGGACACTCTTGGTGTG +
Preference number: 2 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSPEPAT*TDTLGV
Trigger: CACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGG...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTACCAGAACCGGCTACGTaGACGGACACTCTTGGTGTG +
Preference number: 2 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLPEPAT*TDTLGV
Trigger: CACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGG...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTAAGCCACTGGCATCATaGAAGGCAATTGTTTTGGTA +
Preference number: 2 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPKPLAS*KAIVLV
Trigger: TACCAAAACAATTGCCTTGCATGATGCCAGTGGCTT...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACTGGTTGAGGATGTCGTaGGTACAACTTTCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDWLRMS*VQLSLE
Trigger: CTCCAGGGAAAGTTGTACCCACGACATCCTCAACCA...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp TTATTACTGAGTCGACACAGGATGTCACCAGTGAGCCTCATCTCCAGTCCAATGCTTCCATGGTACCAGTaGTTGAGGATGTCGTGGGTA +
Preference number: 2 (lower is better)
Translates to: LLLSRHRMSPVSLISSPMLPWYQ*LRMSWV
Trigger: TACCCACGACATCCTCAACCACTGGTACCATGGAAG...CATTGGACTGGAGATGAGGCTCACTGGTGACATCCTGTGTCGACTCAGTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp CCAAAACCAAATAAATGTACAGTAGGTGTCTGCAGGGGCAACCCTTaGAGCCATGTTTACACAAAGACCTTGTGCCCTCTTGGTGGTGGA +
Preference number: 2 (lower is better)
Translates to: PKPNKCTVGVCRGNP*SHVYTKTLCPLGGG
Trigger: TCCACCACCAAGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACATTTATTTGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp TGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTGCTCTGTACAGCACTGCCACTaGAATGCCCTTAACATGTAC +
Preference number: 2 (lower is better)
Translates to: CTFSYVCSDLLPTNSRCSVQHCH*NALNMY
Trigger: GTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTAC...AGAGCACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTGTGACTATTTATTACTaGGTCGACACAGGATGTCAC +
Preference number: 2 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPVTIYY*VDTGCH
Trigger: GTGACATCCTGTGTCGACTCAGTAATAAATAGTCAC...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGAGTGCACGGACACTCTTaGTGTGTCCTGCGTTTGCTA +
Preference number: 2 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRVHGHS*CVLRLL
Trigger: TAGCAAACGCAGGACACACCAAGAGTGTCCGTGCAC...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCCCTGCGTTTGCTATCTaGAATGAAGTTCTTGTTCTC +
Preference number: 2 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPPAFAI*NEVLVL
Trigger: GAGAACAAGAACTTCATTTCAGATAGCAAACGCAGG...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTACCTGCGTTTGCTATCTaGAATGAAGTTCTTGTTCTC +
Preference number: 2 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLPAFAI*NEVLVL
Trigger: GAGAACAAGAACTTCATTTCAGATAGCAAACGCAGG...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATGCCCAAGGTTATGTTTaGTCCCTCTGTGTGACTGAT +
Preference number: 2 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINAQGYV*SLCVTD
Trigger: ATCAGTCACACAGAGGGATCAAACATAACCTTGGGC...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGGTCCCCTTCTGTGTGTaGACATATTACTACGACTCC +
Preference number: 2 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRVPFCV*TYYYDS
Trigger: GGAGTCGTAGTAATATGTGCACACACAGAAGGGGAC...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATGTCCCCTTCTGTGTGTaGACATATTACTACGACTCC +
Preference number: 2 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINVPFCV*TYYYDS
Trigger: GGAGTCGTAGTAATATGTGCACACACAGAAGGGGAC...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACACGTGTGCTCTGATCTaGTTCCAACAAATTCCAGGT +
Preference number: 2 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDTCALI*FQQIPG
Trigger: ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGT...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCGCTCGCCAGTTCATGTaGACTACCTACCCCTGTGAG +
Preference number: 2 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFARQFM*TTYPCE
Trigger: CTCACAGGGGTAGGTAGTCCACATGAACTGGCGAGC...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCGGTCTAAGGAATAGCTaGCCTTGTCTACGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSGLRNS*PCLRVC
Trigger: GCACACACGTAGACAAGGGCAGCTATTCCTTAGACC...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTCTTGTGCCCTCTTGGTaGTGGAGATTCCACCATATC +
Preference number: 2 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSLVPSW*WRFHHI
Trigger: GATATGGTGGAATCTCCACCACCAAGAGGGCACAAG...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp CTTCCAACAAATTCCAGGTGCTCTCAGGTCCCCACAGACATTCATTaGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTAT +
Preference number: 2 (lower is better)
Translates to: LPTNSRCSQVPTDIH*EHRKTRYDALNGWY
Trigger: ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCTGGAATTTGTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp AGAAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTGGTCTAAGGAATAGCTaGCCTTGTCTACGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: RKAIAPFRTCALICFQQIGLRNS*PCLRVC
Trigger: GCACACACGTAGACAAGGGCAGCTATTCCTTAGACC...AATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTCTCAACATCCACACCTaGATAAACATCGCCTCCCAA +
Preference number: 2 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSLNIHT*INIASQ
Trigger: TTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAG...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTAGAACAGCAAGCCACTaGCATCATGCAAGGCAATTG +
Preference number: 2 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSRTASH*HHARQL
Trigger: CAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCT...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTACTCCTAGGTTTATGCTaGAATGGGAGTGCAGATTGG +
Preference number: 2 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLLLGLC*NGSADW
Trigger: CCAATCTGCACTCCCATTCCAGCATAAACCTAGGAG...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATCCTGCGTTTGCTATCTaGAATGAAGTTCTTGTTCTC +
Preference number: 2 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNPAFAI*NEVLVL
Trigger: GAGAACAAGAACTTCATTTCAGATAGCAAACGCAGG...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTTTCGTACGTGTGCTCTaGTCTGCTTCCAACAAATTC +
Preference number: 2 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSFVRVL*SASNKF
Trigger: GAATTTGTTGGAAGCAGATCAGAGCACACGTACGAA...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTATCTCCGCTAGTGCTGTaGTCTTTTGGTAAATCCACA +
Preference number: 2 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLSPLVL*SFGKST
Trigger: TGTGGATTTACCAAAAGATCACAGCACTAGCGGAGA...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp GATTTTTCACCTAAGAATCAAGAACACAAAGTAGATACCAAATCTCAGGCACCTAGCCTACACAGGGCATaGTCCGAATTTGGACACCAG +
Preference number: 2 (lower is better)
Translates to: DFSPKNQEHKVDTKSQAPSLHRA*SEFGHQ
Trigger: CTGGTGTCCAAATTCGGATCATGCCCTGTGTAGGCT...AGGTGCCTGAGATTTGGTATCTACTTTGTGTTCTTGATTCTTAGGTGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTAGCAGAGATGTGGAATaGAACACTGGCTGGTTTTTC +
Preference number: 2 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSSRDVE*NTGWFF
Trigger: GAAAAACCAGCCAGTGTTGCATTCCACATCTCTGCT...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTTTTGGCCGTAGGGCCTaGAATTTTAACACACTGCTA +
Preference number: 2 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSFGRRA*NFNTLL
Trigger: TAGCAGTGTGTTAAAATTCCAGGCCCTACGGCCAAA...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp GGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGAAGTTCTaGTTCTCTGATTCCTTTTGGCAGAGCAAGCTTTCAGTTGTTTAT +
Preference number: 2 (lower is better)
Translates to: GHSWCVLRLLSEMKF*FSDSFWQSKLSVVY
Trigger: ATAAACAACTGAAAGCTTGCTCTGCCAAAAGGAATCAGAGAACAAGAACTTCATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR TCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATGTACAGCACTGCCACTaGAATGCCCTTAACATGTAC +
Preference number: 2 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYVQHCH*NALNMY
Trigger: GTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTAC...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTACATGAGAAAAGCAATTaGACCTTTTCGTACGTGTGC +
Preference number: 2 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLHEKSN*TFSYVC
Trigger: GCACACGTACGAAAAGGTGCAATTGCTTTTCTCATG...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp AGGATCTTCTTTGATTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGGGGTCTCATAAGCAATaGCAGAACTTCAACAGAGCC +
Preference number: 2 (lower is better)
Translates to: RIFFDFVHHILGQMSQGMGSHKQ*QNFNRA
Trigger: GGCTCTGTTGAAGTTCTGGCATTGCTTATGAGACCC...CATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGGATGCACTGAATGGTTaGTATCAAAATTCAAGCTCA +
Preference number: 2 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRDALNG*YQNSSS
Trigger: TGAGCTTGAATTTTGATACCAACCATTCAGTGCATC...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CCA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAACTTCCATGGTACCAGTaGTTGAGGATGTCGTGGGTA +
Preference number: 2 (lower is better)
Translates to: RSMDSLIRKLRLVRITEELPWYQ*LRMSWV
Trigger: TACCCACGACATCCTCAACCACTGGTACCATGGAAG...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp ATAACCAAAGTACATGGACATTTCCAAATCAGTTTATTGTCACCATaGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAG +
Preference number: 2 (lower is better)
Translates to: ITKVHGHFQISLLSP*HPLRKMHDWPLTTQ
Trigger: CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACTGATTTGGAAATGTCCATGTACTTTGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR GCA 90 bp AGGATCTTCTTTGATTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGACCTTTTCGTACGTGTaGTCTGATCTGCTTCCAACA +
Preference number: 2 (lower is better)
Translates to: RIFFDFVHHILGQMSQGMTFSYV*SDLLPT
Trigger: TGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGT...CATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp GCTAGACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTaGGTATTTCTACCCCTCTTATCAAAACAAGTTATAACCAAAGTA +
Preference number: 2 (lower is better)
Translates to: ARQNSKPLASCKAIV*VFLPLLSKQVITKV
Trigger: TACTTTGGTTATAACTTGTTTTGATAAGAGGGGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGTCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 90 bp AAACAAGTTATAACCAAAGTACATGGACATTTCCAAATCAGTTTATaGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTA +
Preference number: 2 (lower is better)
Translates to: KQVITKVHGHFQISL*SPLHPLRKMHDWPL
Trigger: TAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACTGATTTGGAAATGTCCATGTACTTTGGTTATAACTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp TGGGAAGGAGGCCAGAGGCTGGCATGTGAGGTGGTTTaGATATCACTTCTAGGCACCACTGCACCTTCTCCC +
Preference number: 3 (lower is better)
Translates to: WEGGQRLACEVV*ISLLGTTAPSP
Trigger: GGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAAACCACCTCACATGCCAGCCTCTGGCCTCCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp GCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTaGCAGCAAAAGAGAGCTTCCGCAGTTACCTTCTGC +
Preference number: 3 (lower is better)
Translates to: APLHLLPSSSEP*QQKRASAVTFC
Trigger: GCAGAAGGTAACTGCGGAAGCTCTCTTTTGCTGTCAGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp ACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTaGCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCC +
Preference number: 3 (lower is better)
Translates to: TCFFQEAGLRNS*PCLRVCPGSTA
Trigger: GGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp CACTGCTCGCCAGTTCATGTGGACTACCTACCCCTGTaGGAAAGACCAAACTCAGCAGGCTTCTGTCATTGG +
Preference number: 3 (lower is better)
Translates to: HCSPVHVDYLPL*ERPNSAGFCHW
Trigger: CCAATGACAGAAGCCTGCTGAGTTTGGTCTTTCTCACAGGGGTAGGTAGTCCACATGAACTGGCGAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp CATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATaGTTTCACGTGTGGCCCAAAGAGCTAGCTGTGAAC +
Preference number: 3 (lower is better)
Translates to: HNQQLPGVARSK*FHVWPKELAVN
Trigger: GTTCACAGCTAGCTCTTTGGGCCACACGTGAAAGCATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp GGTAGCAGTGAGCCTAGAACACCCATAACCAGCAACTaGCTGGTGTTGCCAGGTCCAAATGCTTTCACGTGT +
Preference number: 3 (lower is better)
Translates to: GSSEPRTPITSN*LVLPGPNAFTC
Trigger: ACACGTGAAAGCATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACTGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 72 bp TGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTaGTGTGTCCTGCGTTTGCTATCTGAAATGAAGTTC +
Preference number: 3 (lower is better)
Translates to: CTARTGYVHGHS*CVLRLLSEMKF
Trigger: GAACTTCATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTGCTCTCGTGCACGGACACTCTaGGTGTGTCCTGCGTTTGCT +
Preference number: 3 (lower is better)
Translates to: CTFSYVCSDLLPTNSRCSRARTL*VCPAFA
Trigger: AGCAAACGCAGGACACACCAAGAGTGTCCGTGCACG...AGAGCACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTAGCAACTGCCTGGTGTaGCCAGGTCCAAATGCTTTC +
Preference number: 3 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPSNCLV*PGPNAF
Trigger: GAAAGCATTTGGACCTGGCAACACCAGGCAGTTGCT...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGATGGTGTGTCCTGCGTTaGCTATCTGAAATGAAGTTC +
Preference number: 3 (lower is better)
Translates to: TAQGYSTATEMPLTCTARWCVLR*LSEMKF
Trigger: GAACTTCATTTCAGATAGCAAACGCAGGACACACCA...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp GACACCCAAGGGACAAAAAGCCCTGAGATGGAAAGATaGCATGGTCCTCCTCAGTGTGTCTCAGAAATGCAG +
Preference number: 3 (lower is better)
Translates to: DTQGTKSPEMER*HGPPQCVSEMQ
Trigger: CTGCATTTCTGAGACACACTGAGGAGGACCATGGCATCTTTCCATCTCAGGGCTTTTTGTCCCTTGGGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 72 bp GAGAGGGAAGCCTCTGCCAGATTTGGCCGTAGGGCCTaGAATTTTAACACACTGCTACAAAGAACGTACCAG +
Preference number: 3 (lower is better)
Translates to: EREASARFGRRA*NFNTLLQRTYQ
Trigger: CTGGTACGTTCTTTGTAGCAGTGTGTTAAAATTCCAGGCCCTACGGCCAAATCTGGCAGAGGCTTCCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 72 bp GAGCCATGTTTACACAAAGACCTTGTGCCCTCTTGGTaGTGGAGATTCCACCATATCTGCTCCCCACATCTG +
Preference number: 3 (lower is better)
Translates to: EPCLHKDLVPSW*WRFHHICSPHL
Trigger: CAGATGTGGGGAGCAGATATGGTGGAATCTCCACCACCAAGAGGGCACAAGGTCTTTGTGTAAACATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATAAGCCTCTGCCAGATTaGGCCGTAGGGCCTGGAATT +
Preference number: 3 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINKPLPD*AVGPGI
Trigger: AATTCCAGGCCCTACGGCCAAATCTGGCAGAGGCTT...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp ATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCTaGGATGGAAAGATGCCATGGTCCTCCTCAGTGTGT +
Preference number: 3 (lower is better)
Translates to: MSTLRHPRDKKP*DGKMPWSSSVC
Trigger: ACACACTGAGGAGGACCATGGCATCTTTCCATCTCAGGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp GCTATAAGGGAGGATAGAGAGAGCCTACACAGGGCATaGTCCGAATTTGGACACCAGTCTCCCAAGTACATC +
Preference number: 3 (lower is better)
Translates to: AIREDRESLHRA*SEFGHQSPKYI
Trigger: GATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCCCTGTGTAGGCTCTCTCTATCCTCCCTTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp GGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTaGCCTCTTGGTGGTGGAGATTCCACCATATCTGCT +
Preference number: 3 (lower is better)
Translates to: GNPLSHVYTKTL*PLGGGDSTISA
Trigger: AGCAGATATGGTGGAATCTCCACCACCAAGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATAGCAACTGCCTGGTGTaGCCAGGTCCAAATGCTTTC +
Preference number: 3 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINSNCLV*PGPNAF
Trigger: GAAAGCATTTGGACCTGGCAACACCAGGCAGTTGCT...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTCTGACACTGTAGTGAAGTaGAAAGCAGACTTTGGTCAG +
Preference number: 3 (lower is better)
Translates to: CLQGQPFEPCLHKDLVPSDTVVK*KADFGQ
Trigger: CTGACCAAAGTCTGCTTTCAACTTCACTACAGTGTC...AGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGACTCTGTGTGACTGATTaGACTCATTTGGGGAAGCAT +
Preference number: 3 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRLCVTD*THLGKH
Trigger: ATGCTTCCCCAAATGAGTCAAATCAGTCACACAGAG...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTCAACTACAATGGCCCTaGACAAGTATCTGTGCTCAA +
Preference number: 3 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPQLQWP*TSICAQ
Trigger: TTGAGCACAGATACTTGTCAAGGGCCATTGTAGTTG...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp GTTTACATGGAGTATGGATGGGTTGGTGAAGTCCAATaGAGGTATGGTGCAGAGACAGAGGACAGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: VYMEYGWVGEVQ*RYGAETEDRAL
Trigger: CAAAGCCCTGTCCTCTGTCTCTGCACCATACCTTCATTGGACTTCACCAACCCATCCATACTCCATGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp AAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTaGTTCCAACAAATTCCAGGTGCTCTCAGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: KAIAPFRTCALI*FQQIPGALRSP
Trigger: TGGGGACCTGAGAGCACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp TTCAATGAGCTGACGTTCATAAAGTGCCTAATCCTGTaGCTGGCCCACAGAAGGCACTGGATAAATGAGAGG +
Preference number: 3 (lower is better)
Translates to: FNELTFIKCLIL*LAHRRHWINER
Trigger: CCTCTCATTTATCCAGTGCCTTCTGTGGGCCAGGCACAGGATTAGGCACTTTATGAACGTCAGCTCATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 72 bp TACACACTGGATGCTTCATATTCTCACCAAATCCAGTaGGTAAAAACCAGCCCCACCCAAACTCTGGTCACC +
Preference number: 3 (lower is better)
Translates to: YTLDASYSHQIQ*VKTSPTQTLVT
Trigger: GGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCACTGGATTTGGTGAGAATATGAAGCATCCAGTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTCCCACAGACATTCATTaGGAGCATAGAAAGACTAGG +
Preference number: 3 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRPTDIH*EHRKTR
Trigger: CCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGG...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTTTCCAAATCAGTTTATaGTCACCATTGCACCCACTG +
Preference number: 3 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPFQISL*SPLHPL
Trigger: CAGTGGGTGCAATGGTGACAATAAACTGATTTGGAA...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGTGGTGTGTCCTGCGTTaGCTATCTGAAATGAAGTTC +
Preference number: 3 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQWCVLR*LSEMKF
Trigger: GAACTTCATTTCAGATAGCAAACGCAGGACACACCA...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTCATCATGCAAGGCAATaGTTTTGGTATTTCTACCCC +
Preference number: 3 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRHHARQ*FWYFYP
Trigger: GGGGTAGAAATACCAAAACAATTGCCTTGCATGATG...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTTTGGAGATAGCGAGATaGGATCTTATCACTATGTCT +
Preference number: 3 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPLEIAR*DLITMS
Trigger: AGACATAGTGATAAGATCCAATCTCGCTATCTCCAA...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTGCTCAACTCCCTCCCTaGATGTGCAGACAAGGTAAC +
Preference number: 3 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSAQLPP*MCRQGN
Trigger: GTTACCTTGTCTGCACATCAAGGGAGGGAGTTGAGC...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp CCCAGCCCAAGGTTATGTTTGATCCCTCTGTGTGACTaGTTTGACTCATTTGGGGAAGCATCTATGCACATA +
Preference number: 3 (lower is better)
Translates to: PSPRLCLIPLCD*FDSFGEASMHI
Trigger: TATGTGCATAGATGCTTCCCCAAATGAGTCAAATCAGTCACACAGAGGGATCAAACATAACCTTGGGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp TGTGTATGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTaGGAGAGAGAGAGATGTCTGTCTGATCATAGTACT +
Preference number: 3 (lower is better)
Translates to: CVCVRVCVCVCV*ERERCLSDHST
Trigger: AGTACTATGATCAGACAGACATCTCTCTCTCTCTCACACACACACACACACACACACACGCACACATACACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp ACACACACACACACACACACACACTCTATACAGCCCTaGCCCAAAGTGATAAATATCACTGTTGGGTTAGGA +
Preference number: 3 (lower is better)
Translates to: THTHTHTHSIQP*PKVINITVGLG
Trigger: TCCTAACCCAACAGTGATATTTATCACTTTGGGGCAGGGCTGTATAGAGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp CTTTCCCGTGGTTCAGAAACCCTGGTACACACTGGATaGTTCATATTCTCACCAAATCCAGTGGGTAAAAAC +
Preference number: 3 (lower is better)
Translates to: LSRGSETLVHTG*FIFSPNPVGKN
Trigger: GTTTTTACCCACTGGATTTGGTGAGAATATGAAGCATCCAGTGTGTACCAGGGTTTCTGAACCACGGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 72 bp GAATACCAGCTCTACCACTTTCTTGCTGTGTGCCATTaGATAAATAACATAGCTTCCCTGAGCCTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: EYQLYHFLAVCH*INNIASLSLCV
Trigger: GACACAGAGGCTCAGGGAAGCTATGTTATTTATCCAATGGCACACAGCAAGAAAGTGGTAGAGCTGGTATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 72 bp TATACAGCCCTGCCCCAAAGTGATAAATATCACTGTTaGGTTAGGACTGGGTATGGAGCTGTACTCTTTCCA +
Preference number: 3 (lower is better)
Translates to: YTALPQSDKYHC*VRTGYGAVLFP
Trigger: TGGAAAGAGTACAGCTCCATACCCAGTCCTAACCCAACAGTGATATTTATCACTTTGGGGCAGGGCTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 72 bp TTGTTTTCCTACGCCTTTCCCGTGGTTCAGAAACCCTaGTACACACTGGATGCTTCATATTCTCACCAAATC +
Preference number: 3 (lower is better)
Translates to: LFSYAFPVVQKP*YTLDASYSHQI
Trigger: GATTTGGTGAGAATATGAAGCATCCAGTGTGTACCAGGGTTTCTGAACCACGGGAAAGGCGTAGGAAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp TTTATTGTCACCATTGCACCCACTGAGGAAAATGCATaGTTGGCCTTTAACCACGCAGCAGTTGATGTCATG +
Preference number: 3 (lower is better)
Translates to: FIVTIAPTEENA*LAFNHAAVDVM
Trigger: CATGACATCAACTGCTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp CTGATACAAACCCATTTAAAATCATCATGCAACCTATaGCTAGCCATTCCCCGACTTTCCTCTGCGGGATGT +
Preference number: 3 (lower is better)
Translates to: LIQTHLKSSCNL*LAIPRLSSAGC
Trigger: ACATCCCGCAGAGGAAAGTCGGGGAATGGCTAGTCATAGGTTGCATGATGATTTTAAATGGGTTTGTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp TGTCATGAGAAAAGCAATTGCACCTTTTCGTACGTGTaGTCTGATCTGCTTCCAACAAATTCCAGGTGCTCT +
Preference number: 3 (lower is better)
Translates to: CHEKSNCTFSYV*SDLLPTNSRCS
Trigger: AGAGCACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTTCTCATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp GACTTTGAATACCAGCTCTACCACTTTCTTGCTGTGTaGCATTGGATAAATAACATAGCTTCCCTGAGCCTC +
Preference number: 3 (lower is better)
Translates to: DFEYQLYHFLAV*HWINNIASLSL
Trigger: GAGGCTCAGGGAAGCTATGTTATTTATCCAATGGCACACAGCAAGAAAGTGGTAGAGCTGGTATTCAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp CAGAGAACTGATGCACCCACAATCACAGGCTATGACTaGTGGAACACAAATAGTCCTAGTTACCTTAGTAAC +
Preference number: 3 (lower is better)
Translates to: QRTDAPTITGYD*WNTNSPSYLSN
Trigger: GTTACTAAGGTAACTAGGACTATTTGTGTTCCAGCAGTCATAGCCTGTGATTGTGGGTGCATCAGTTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 72 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTaGCCTTTAACCACGCAGCAGTTGATGTCATGTTTT +
Preference number: 3 (lower is better)
Translates to: LSPLHPLRKMHD*PLTTQQLMSCF
Trigger: AAAACATGACATCAACTGCTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CCA 72 bp AGAACTGATGCACCCACAATCACAGGCTATGACTGCTaGAACACAAATAGTCCTAGTTACCTTAGTAACAGG +
Preference number: 3 (lower is better)
Translates to: RTDAPTITGYDC*NTNSPSYLSNR
Trigger: CCTGTTACTAAGGTAACTAGGACTATTTGTGTTCCAGCAGTCATAGCCTGTGATTGTGGGTGCATCAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCCCCACAGACATTCATTaGGAGCATAGAAAGACTAGG +
Preference number: 3 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSPTDIH*EHRKTR
Trigger: CCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGG...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCTTCCAAATCAGTTTATaGTCACCATTGCACCCACTG +
Preference number: 3 (lower is better)
Translates to: TEQQATGIMQGNCFGISTFQISL*SPLHPL
Trigger: CAGTGGGTGCAATGGTGACAATAAACTGATTTGGAA...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTGACACTGTAGTGAAGTaGAAAGCAGACTTTGGTCAG +
Preference number: 3 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSDTVVK*KADFGQ
Trigger: CTGACCAAAGTCTGCTTTCAACTTCACTACAGTGTC...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp CCACTGAAGATGGTGGACGTGTGCTCTTTCTTTGTGTaGAATCGAAACATTTCTCCTAGGTTTATGCTGGAA +
Preference number: 3 (lower is better)
Translates to: PLKMVDVCSFFV*NRNISPRFMLE
Trigger: TTCCAGCATAAACCTAGGAGAAATGTTTCGATTTCACACAAAGAAAGAGCACACGTCCACCATCTTCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp CTAACAGTGAGAAAGAATAACCCCATATTAGCAAAATaGAACAAGCAGAGATGTGGAATGCAACACTGGCTG +
Preference number: 3 (lower is better)
Translates to: LTVRKNNPILAK*NKQRCGMQHWL
Trigger: CAGCCAGTGTTGCATTCCACATCTCTGCTTGTTGCATTTTGCTAATATGGGGTTATTCTTTCTCACTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTTCTGAAATGAAGTTCTaGTTCTCTGATTCCTTTTGG +
Preference number: 3 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGSEMKF*FSDSFW
Trigger: CCAAAAGGAATCAGAGAACAAGAACTTCATTTCAGA...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR-3UTR CAA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTTCTGAAATGAAGTTCTaGTTCTCTGATTCCTTTTGG +
Preference number: 3 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSSEMKF*FSDSFW
Trigger: CCAAAAGGAATCAGAGAACAAGAACTTCATTTCAGA...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp GGAATGATTCCCATAGTAAAACTCAACATCCACACCTaGATAAACATCGCCTCCCAAGTGACTATTTATTAC +
Preference number: 3 (lower is better)
Translates to: GMIPIVKLNIHT*INIASQVTIYY
Trigger: GTAATAAATAGTCACTTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAGTTTTACTATGGGAATCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp AAATTTCCAAAACCAAATAAATGTACAGTAGGTGTCTaGAGGGGCAACCCTTTGAGCCATGTTTACACAAAG +
Preference number: 3 (lower is better)
Translates to: KFPKPNKCTVGV*RGNPLSHVYTK
Trigger: CTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACATTTATTTGGTTTTGGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp TTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTaGATGGTTGGTATCAAAATTCAAGCTCAGAGCACA +
Preference number: 3 (lower is better)
Translates to: FIWSIERLGMMH*MVGIKIQAQST
Trigger: TGTGCTCTGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR TCA 72 bp TATAATGGGTTTGCAAATACTTCCCACATAGTGTCGTaGAGTTTCAATGAGCTGACGTTCATAAAGTGCCTA +
Preference number: 3 (lower is better)
Translates to: YNGFANTSHIVS*SFNELTFIKCL
Trigger: TAGGCACTTTATGAACGTCAGCTCATTGAAACTTCACGACACTATGTGGGAAGTATTTGCAAACCCATTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR GCA 72 bp CAGCTTAGTGCTTTGAACTATTTTATTCCTGCTGTATaGAGAGTTTCTACAAAGTTAGCAAGTAAAGTGCAA +
Preference number: 3 (lower is better)
Translates to: QLSALNYFIPAV*RVSTKLASKVQ
Trigger: TTGCACTTTACTTGCTAACTTTGTAGAAACTCTGCATACAGCAGGAATAAAATAGTTCAAAGCACTAAGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGGGGCTGGCACACCGGTaGTGCTGCGGGAACGGCCAC +
Preference number: 4 (lower is better)
Translates to: NMYGQNRLRARTLLVCPAGLAHR*CCGNGH
Trigger: GTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCC...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGGGGCTGGCACACCGGTaGTGCTGCGGGAACGGCCAC +
Preference number: 4 (lower is better)
Translates to: CTARTGYVHGHSWCVLRLGLAHR*CCGNGH
Trigger: GTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCC...CAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGTGGCGCTCTTGGGCTaGCACACCGGTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATVALLG*HTGAAA
Trigger: CGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCAC...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGCTCCATGCTGCGGATaGTGGCCGCCCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATAPCCG*WPPAAA
Trigger: AGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGC...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCCTGGGATGAGGCCTTaGAGCGGCCGGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CTARTGYVHGHSWCVLRLPGMRP*SGRCPG
Trigger: CCCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGG...CAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGGCTCCATGCTGCGGATaGTGGCCGCCCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CTARTGYVHGHSWCVLRLAPCCG*WPPAAA
Trigger: AGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGC...CAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAGCATGTCCAGTGAGTaGGCCCGCTGGTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LVYVCAQVALPRGTALPLSMSSE*ARWSRP
Trigger: GGGCCTGGACCAGCGGGCCCACTCACTGGACATGCT...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGTGGCGCTCTTGGGCTaGCACACCGGTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQVALLG*HTGAAA
Trigger: CGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCAC...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCCCGGCATGGGAAGGCTaGGAAAGCCCGAAAACCCCA +
Preference number: 4 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTAPAWEG*ESPKTP
Trigger: TGGGGTTTTCGGGCTTTCCCAGCCTTCCCATGCCGG...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTGCAGGAGACCCGGGCTaGCGGCCACTGCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPAGDPG*RPLRPG
Trigger: CCCAGGACGCAGTGGCCGCCAGCCCGGGTCTCCTGC...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR TCA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGCCCGGAACTCAGCCGTaGCATTGGCCTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LVYVCAQVALPRGTALPLPGTQP*HWPSTL
Trigger: CAGAGTGGAAGGCCAATGTCACGGCTGAGTTCCGGG...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTGCCGGCGCTCCATGCTaGGGATGGTGGCCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTAGAPC*GWWPPA
Trigger: AGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGC...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGCCATGCTTGTTCAGCTaGTCCGGCCCCTTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: NMYGQNRLRARTLLVCPAPCLFS*SGPFRR
Trigger: GCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGG...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTGAGGGCTTGGGTGTTTaGACCGGCCAGGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCEGLGV*TGQGVA
Trigger: GGCCACCCCCTGGCCGGTGCAAACACCCAAGCCCTC...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGGCTCCATGCTGCGGATaGTGGCCGCCCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVAPCCG*WPPAAA
Trigger: AGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGC...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTAGTGAGTGGGCCCGCTaGTCCAGGCCCAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTSEWAR*SRPSRR
Trigger: CCGGCGGCTGGGCCTGGACCAGCGGGCCCACTCACT...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCCAAAACCTGCCCGGCTaGAGCGCACCAATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTAQNLPG*SAPIVA
Trigger: GGCAACTATTGGTGCGCTCCAGCCGGGCAGGTTTTG...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR GCA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTGGGCTGGCACACCGGTaGTGCTGCGGGAACGGCCAC +
Preference number: 4 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPGLAHR*CCGNGH
Trigger: GTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCC...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGCCTTGTCTACGTGTGTaGCCAGGTAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LVYVCAQVALPRGTALPLPCLRV*PGSTAQ
Trigger: CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGCCGGGCACGGGTCTCTaGAGCTCAAAACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWPGTGL*SSKPAR
Trigger: CCGGGCAGGTTTTGAGCTGCAGAGACCCGTGCCCGG...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR GCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACCGGGCTGGCGGCCACTaGGTCCTGGGTGCACTCGGT +
Preference number: 4 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDRAGGH*VLGALG
Trigger: ACCGAGTGCACCCAGGACGCAGTGGCCGCCAGCCCG...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTCCGGCTCCCGGTCTTTaGTGTCCGTGGGTATCATTC +
Preference number: 4 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATPAPGL*CPWVSF
Trigger: GAATGATACCCACGGACACCAAAGACCGGGAGCCGG...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCCAGAGCCTAAAGGTCTaGGGACAGGGAGATGGGACT +
Preference number: 4 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTAQSLKV*GQGDGT
Trigger: AGTCCCATCTCCCTGTCCCCAGACCTTTAGGCTCTG...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGTGAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATCCTGGGATGAGGCCTTaGAGCGGCCGGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SEPRTPITSNCLVLPGPNPGMRP*SGRCPG
Trigger: CCCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGG...ATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCTGTTTTTCCTCTTGGTaGGTCTGGAGGTGGACCCGA +
Preference number: 4 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTACFSSW*VWRWTR
Trigger: TCGGGTCCACCTCCAGACTCACCAAGAGGAAAAACA...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTGACGCACCCTGCCCATaGTTGTTCAGCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCDAPCP*LFSCSG
Trigger: GCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTC...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCCCGTCAGCATGGCTGTaGTGGAGTTGTCTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTAPSAWL*WSCLSY
Trigger: GTAACTCAGACAACTCCAGCACAGCCATGCTGACGG...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGCCAGAACCGGCTACGTaGACGGACACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: NMYGQNRLRARTLLVCPAPEPAT*TDTLGV
Trigger: CACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGG...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGGCACACCGGTGCTGCTaGGGGAACGGCCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMAHRCC*GNGHQG
Trigger: TCCTTGGTGGCCGTTCCCGCAGCAGCACCGGTGTGC...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGTCCTGGCTACCACTGTaGCTCGGGAGGAAATGGACA +
Preference number: 4 (lower is better)
Translates to: LVYVCAQVALPRGTALPLSWLPL*LGRKWT
Trigger: TGTCCATTTCCTCCCGAGCCACAGTGGTAGCCAGGA...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCGCATCAAGAGCATGCTaGATCAACGTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTAASRAC*INVSSS
Trigger: GGAGCTGGAGACGTTGATCCAGCATGCTCTTGATGC...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGCTGCCGAGGTCCCAGTaGCTGCTGTTGTTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: NMYGQNRLRARTLLVCPALPRSQ*LLLLEE
Trigger: CTCTTCCAACAACAGCAGCCACTGGGACCTCGGCAG...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTCCATGCTGCGGATGGTaGCCGCCCGCTGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCPCCGW*PPAAAY
Trigger: ATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGG...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGAGGGCTCACACAGACATaGTCCCGCAGGAATTCCGCC +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARGLTQT*SRRNSA
Trigger: GGCGGAATTCCTGCGGGATCATGTCTGTGTGAGCCC...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTACAGGATGGTTGAGATaGCCCGGATCTTGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATTGWLR*PGSWSD
Trigger: GTCAGACCAAGATCCGGGTCATCTCAACCATCCTGT...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTAGCCCCCTTGGGAGGTaGCTTCCATCCTGGCTACCA +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCSPLGR*LPSWLP
Trigger: TGGTAGCCAGGATGGAAGGCACCTCCCAAGGGGGCT...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTCGAGGTCCCAGTGGCTaGTGTTGTTGGAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATRGPSG*CCWKSF
Trigger: GAAACTCTTCCAACAACAGCAGCCACTGGGACCTCG...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCAAAGAAAAAGGCACTaGCGAGGTCCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CTARTGYVHGHSWCVLRLQRKRH*RGPSGC
Trigger: GCAGCCACTGGGACCTCGGCAGTGCCTTTTTCTTTG...CAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGATGGTGGCCGCCCGCTaGAGCTTATCGTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWMVAAR*SLSWIS
Trigger: GGAGATCCACGATAAGCTGCAGCGGGCGGCCACCAT...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTGCCGGCGCTCCATGCTaGGGATGGTGGCCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGAGAPC*GWWPPA
Trigger: AGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGC...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTTCCTCGGACGCACCCTaGCCATGCTTGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCSSDAP*PCLFSC
Trigger: GCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGA...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTTCTAGGCACCACTaGACCTTCTCCCTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTATSRHH*TFSLQA
Trigger: AGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGT...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGATGGCTCGGGAGGAAATaGACAGGCGCGGAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARWLGRK*TGAELE
Trigger: CTCCAACTCCGCGCCTGTCCATTTCCTCCCGAGCCA...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTCCACCACAAAGTAAATaGACTCCAAGGCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SCPCLRVCPGSTAQGYSTPPQSK*TPRPSS
Trigger: GCTGGACGGCCTTGGAGTCCATTTACTTTGTGGTGG...AGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACGCGCAGCCTGAAGGCTaGGGCTACGGAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDAQPEG*GYGEAH
Trigger: GTGGGCTTCTCCGTAGCCCCAGCCTTCAGGCTGCGC...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp AGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCCACAGAAGGCACTaGATAAATGAGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SCPCLRVCPGSTAQGYSTAHRRH*INEREA
Trigger: GGCTTCCCTCTCATTTATCCAGTGCCTTCTGTGGGC...AGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGACCGTCTTCCACTTCATaGCGGTCTGCAAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARPSSTS*RSASPL
Trigger: AAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGG...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGACCACTCCCGATAATTaGTGCCAGCGTTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQTTPDN*CQRFPL
Trigger: CAGGGGGAAACGCTGGCATCAATTATCGGGAGTGGT...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGCTGCCGCATGGGCCTTaGTTTCACCCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQLPHGP*FHPPLL
Trigger: AAGAAGAGGTGGGTGAAATCAAGGCCCATGCGGCAG...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTACGTGGATCTCCACGCTaGGCCTTCGCCGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLRGSPR*AFAVSP
Trigger: GGGAGACACGGCGAAGGCTCAGCGTGGAGATCCACG...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTAGAGCTGTGCATTTTTaGGAAATGGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SCPCLRVCPGSTAQGYSTRAVHF*EMGRDR
Trigger: CCTGTCCCTGCCCATTTCTCAAAAATGCACAGCTCT...AGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGTCCAATGGAGGAGTTaGCTTAGACCTTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATVQWRS*LRPSLD
Trigger: GTCCAAGGAAGGTCTAAGTCAACTCCTCCATTGGAC...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTTGCACTGATGTCAACTaGCTTAGGGCAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATCTDVN*LRAGMR
Trigger: TCTCATGCCTGCCCTAAGTCAGTTGACATCAGTGCA...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGCACTTCATGACGGTCTaGAAGCCCCCTTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVHFMTV*KPPWEV
Trigger: CACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTG...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGCTGCTCTCAAAGGGCTaGTCCAATGCCCGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQLLSKG*SNARKT
Trigger: TGTCTTCCGGGCATTGGAGCAGCCCTTTGAGAGCAG...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTTGGTATTCTTCTGGCTaGTCTCAAAGGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SCPCLRVCPGSTAQGYSTWYSSG*SQRAAP
Trigger: TGGAGCAGCCCTTTGAGAGCAGCCAGAAGAATACCA...AGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCATGCTTGTTCAGCTaGTCCGGCCCCTTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTPCLFS*SGPFRR
Trigger: GCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGG...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACCCATGCTTGTTCAGCTaGTCCGGCCCCTTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDPCLFS*SGPFRR
Trigger: GCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGG...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGTTCTCCAACTCAGCGTaGTGCTGGATACAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: CTARTGYVHGHSWCVLRLFSNSA*CWIQSV
Trigger: GACGGACTGTATCCAGCAGCACGCTGAGTTGGAGAA...CAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTTACGGAGAAGCCCACTaGAGTGTCACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPYGEAH*SVTPAP
Trigger: GGGGGCTGGAGTGACACTGCAGTGGGCTTCTCCGTA...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR GCA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGCCTGAGATGGAAAGATaGCATGGTCCTCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LVYVCAQVALPRGTALPLPEMER*HGPPQC
Trigger: ACACTGAGGAGGACCATGGCATCTTTCCATCTCAGG...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGCCACCACAAAGTAAATaGACTCCAAGGCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NMYGQNRLRARTLLVCPAPPQSK*TPRPSS
Trigger: GCTGGACGGCCTTGGAGTCCATTTACTTTGTGGTGG...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAAGAACTGGAGAGGGCTTaGGTGTTTGCACCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EPATCTDTLGVSCVCYLKELERA*VFAPAR
Trigger: CCTGGCCGGTGCAAACACCCAAGCCCTCTCCAGTTC...TTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR TCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTCCGTCTTCCACTTCATaGCGGTCTGCAAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPPSSTS*RSASPL
Trigger: AAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGG...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGACAGGATGGTTGAGATaGCCCGGATCTTGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQTGWLR*PGSWSD
Trigger: GTCAGACCAAGATCCGGGTCATCTCAACCATCCTGT...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACCACTCCCGATAATTaGTGCCAGCGTTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCTTPDN*CQRFPL
Trigger: CAGGGGGAAACGCTGGCATCAATTATCGGGAGTGGT...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGTGTTGGGCCGGTTGTTaGTGCTCTCCTGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMCWAGC*CSPGMR
Trigger: CCTCATCCCAGGAGAGCATCAACAACCGGCCCAACA...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGCGGCCACTGAATCACTaGGACAGCCTTCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVRPLNH*DSLQSC
Trigger: ACAGGACTGAAGGCTGTCGCAGTGATTCAGTGGCCG...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312350.9
CDS-3UTR GCA 90 bp TGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTCTAGCCCCCTTGGGAGGTaGCTTCCATCCTGGCTACCA +
Preference number: 4 (lower is better)
Translates to: CLQGQPFEPCLHKDLVPSSPLGR*LPSWLP
Trigger: TGGTAGCCAGGATGGAAGGCACCTCCCAAGGGGGCT...AGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTCACTTCATGACGGTCTaGAAGCCCCCTTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPHFMTV*KPPWEV
Trigger: CACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTG...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTCTGCTCTCAAAGGGCTaGTCCAATGCCCGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCLLSKG*SNARKT
Trigger: TGTCTTCCGGGCATTGGAGCAGCCCTTTGAGAGCAG...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTGCCGGCGCTCCATGCTaGGGATGGTGGCCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSAGAPC*GWWPPA
Trigger: AGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGC...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGTGAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATTCCTCGGACGCACCCTaGCCATGCTTGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SEPRTPITSNCLVLPGPNSSDAP*PCLFSC
Trigger: GCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGA...ATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ATGGTACCAGTGGTTGAGGATGTCGTGGGTACAACTTTCCCTGGAGGTCAGAAACTGGCACACCGGTGCTaGTGCGGGAACGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: MVPVVEDVVGTTFPGGQKLAHRC*CGNGHF
Trigger: AAAGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAG...TTTCTGACCTCCAGGGAAAGTTGTACCCACGACATCCTCAACCACTGGTACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR GCA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGGGCAGGGAAGAGCTGTaGATTTTTGAGAAATGGGCA +
Preference number: 4 (lower is better)
Translates to: LVYVCAQVALPRGTALPLGREEL*IFEKWA
Trigger: TGCCCATTTCTCAAAAATGCACAGCTCTTCCCTGCC...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGAGTCTGCAAGCCCCCTTaGGAGGTGCCTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRVCKPP*EVPSIL
Trigger: CAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGAC...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCCTTCTCCAAGGCGATaGTATTCTTCTGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CTARTGYVHGHSWCVLRLPSPRR*YSSGCS
Trigger: AGAGCAGCCAGAAGAATACCATCGCCTTGGAGAAGG...CAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTTCCACTCTGCCGCATaGGCCTTGATTTCACCCACC +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWFHSAA*ALISPT
Trigger: GGTGGGTGAAATCAAGGCCCATGCGGCAGAGTGGAA...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGACGCTGCAGCTTATCGTaGATCTCCACGCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARRCSLS*ISTLSL
Trigger: AAGGCTCAGCGTGGAGATCCACGATAAGCTGCAGCG...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCAGTGAGTGGGCCCGCTaGTCCAGGCCCAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGSEWAR*SRPSRR
Trigger: CCGGCGGCTGGGCCTGGACCAGCGGGCCCACTCACT...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTAGCTTGGGGGAGAACTaGAGAGGGCTTGGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCSLGEN*RGLGCL
Trigger: CAAACACCCAAGCCCTCTCCAGTTCTCCCCCAAGCT...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp GAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAAGTAACAGGCCAGAGATaGCCCAACACCACCCCAACC +
Preference number: 4 (lower is better)
Translates to: EPATCTDTLGVSCVCYLKVTGQR*PNTTPT
Trigger: GGTTGGGGTGGTGTTGGGCCATCTCTGGCCTGTTAC...TTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGGCATGATCCGAATTTaGACACCAGTCTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: SCPCLRVCPGSTAQGYSTGMIRI*TPVSQV
Trigger: TACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC...AGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCTGTGGAATGCAACACTaGCTGGTTTTTCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTACGMQH*LVFPFS
Trigger: CGAGAAAGGAAAAACCAGCCAGTGTTGCATTCCACA...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGTCTGTGACTCTGGGATaGGAAGGAGGCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMSVTLG*EGGQRL
Trigger: CAGCCTCTGGCCTCCTTCCCATCCCAGAGTCACAGA...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTTTTTCCTCTTGGTaGGTCTGGAGGTGGACCCGA +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWCFSSW*VWRWTR
Trigger: TCGGGTCCACCTCCAGACTCACCAAGAGGAAAAACA...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTTTCGTACGTGTGCTCTaGTCTGCTTCCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATFVRVL*SASNKF
Trigger: GAATTTGTTGGAAGCAGATCAGAGCACACGTACGAA...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACAGGATGTCACCAGTaGGCCTCATCTCCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCTGCHQ*ASSPVQ
Trigger: TTGGACTGGAGATGAGGCTCACTGGTGACATCCTGT...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTCATGAGCCCTCCCGGTaGCAGTACACTAAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCHEPSR*QYTKEL
Trigger: TAGCTCTTTAGTGTACTGTCACCGGGAGGGCTCATG...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCATGGTGGCCGCCCGCTaGAGCTTATCGTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPMVAAR*SLSWIS
Trigger: GGAGATCCACGATAAGCTGCAGCGGGCGGCCACCAT...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTTCCAACTCAGCGTGCTaGTGGATACAGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPSNSAC*WIQSVS
Trigger: GCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGA...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTTCTCCAACTCAGCGTaGTGCTGGATACAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVFSNSA*CWIQSV
Trigger: GACGGACTGTATCCAGCAGCACGCTGAGTTGGAGAA...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGTGAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATCCAGAACCGGCTACGTaGACGGACACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SEPRTPITSNCLVLPGPNPEPAT*TDTLGV
Trigger: CACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGG...ATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGATGTACAGTAGGTGTCTaGAGGGGCAACCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARCTVGV*RGNPLS
Trigger: GCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACA...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAGCGCACCAATAGTTaGCCCACCACTTTAATGAAT +
Preference number: 4 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATERTNS*PTTLMN
Trigger: ATTCATTAAAGTGGTGGGGCAACTATTGGTGCGCTC...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR GCA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAACTTCCATGGCTATTaGTTCAGGCGGGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: LVYVCAQVALPRGTALPLNFHGY*FRRVKS
Trigger: AGACTTAACCCGCCTGAAGCAATAGCCATGGAAGTT...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTATGGCTCGGGAGGAAATaGACAGGCGCGGAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLWLGRK*TGAELE
Trigger: CTCCAACTCCGCGCCTGTCCATTTCCTCCCGAGCCA...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGTTCCACTCTGCCGCATaGGCCTTGATTTCACCCACC +
Preference number: 4 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMFHSAA*ALISPT
Trigger: GGTGGGTGAAATCAAGGCCCATGCGGCAGAGTGGAA...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGAGTGAGTGGGCCCGCTaGTCCAGGCCCAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQESEWAR*SRPSRR
Trigger: CCGGCGGCTGGGCCTGGACCAGCGGGCCCACTCACT...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGAGCATGTCCAGTGAGTaGGCCCGCTGGTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRSMSSE*ARWSRP
Trigger: GGGCCTGGACCAGCGGGCCCACTCACTGGACATGCT...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTCTCCGGCTCCCGGTCTTTaGTGTCCGTGGGTATCATTC +
Preference number: 4 (lower is better)
Translates to: CLQGQPFEPCLHKDLVPSPAPGL*CPWVSF
Trigger: GAATGATACCCACGGACACCAAAGACCGGGAGCCGG...AGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGGTGGTTCAGAAACCCTaGTACACACTGGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: CTARTGYVHGHSWCVLRLVVQKP*YTLDAS
Trigger: TGAAGCATCCAGTGTGTACCAGGGTTTCTGAACCAC...CAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGGAACTGAGGTTTACATaGAGTATGGATGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LVYVCAQVALPRGTALPLELRFT*SMDGLV
Trigger: CACCAACCCATCCATACTCCATGTAAACCTCAGTTC...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGCCTGGGTGCACTCGGTaGCAAAGCGCTGCTACCGGG +
Preference number: 4 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRPGCTR*QSAATG
Trigger: CCCGGTAGCAGCGCTTTGCCACCGAGTGCACCCAGG...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
3UTR CAA 72 bp GAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTaGCCAGGTCCAAATGCTTTCACGTGTGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: EPRTPITSNCLV*PGPNAFTCGPK
Trigger: CTTTGGGCCACACGTGAAAGCATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTAGACAAGACCGCCAGTaGCAAGGTAGACCACCACAA +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPRQDRQ*QGRPPQ
Trigger: TTGTGGTGGTCTACCTTGTCACTGGCGGTCTTGTCT...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTACAGGATGGTTGAGATaGCCCGGATCTTGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPTGWLR*PGSWSD
Trigger: GTCAGACCAAGATCCGGGTCATCTCAACCATCCTGT...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGCCCGGAACTCAGCCGTaGCATTGGCCTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQPGTQP*HWPSTL
Trigger: CAGAGTGGAAGGCCAATGTCACGGCTGAGTTCCGGG...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATCGTGGATCTCCACGCTaGGCCTTCGCCGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNRGSPR*AFAVSP
Trigger: GGGAGACACGGCGAAGGCTCAGCGTGGAGATCCACG...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTCGTACGTGTGCTCTaGTCTGCTTCCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: NMYGQNRLRARTLLVCPAFVRVL*SASNKF
Trigger: GAATTTGTTGGAAGCAGATCAGAGCACACGTACGAA...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGACACCATTGCACCCACTaGGGAAAATGCATGATTGGC +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARHHCTH*GKCMIG
Trigger: GCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTG...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGAGCAGGGGCAACCCTTTaGGCCATGTTTACACAAAGA +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARAGATL*AMFTQR
Trigger: TCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGC...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTAGCCTACACAGGGCATaGTCCGAATTTGGACACCAG +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPSLHRA*SEFGHQ
Trigger: CTGGTGTCCAAATTCGGATCATGCCCTGTGTAGGCT...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGTATGGATGGGTTGGTaGAGTCCAATGAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQVWMGW*SPMKVW
Trigger: CCATACCTTCATTGGACTTCACCAACCCATCCATAC...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCGCCGGAGCCGGGGGTTaGCCGTTAGTGGCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGAGAGG*PLVALL
Trigger: CAAGAGCGCCACTAACGGGCAACCCCCGGCTCCGGC...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGAGCCCCCTTGGGAGGTaGCTTCCATCCTGGCTACCA +
Preference number: 4 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQSPLGR*LPSWLP
Trigger: TGGTAGCCAGGATGGAAGGCACCTCCCAAGGGGGCT...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAGGGCTGCTCCAATaGCCGGAAGACAAGACCGCC +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLKGLLQ*PEDKTA
Trigger: GGCGGTCTTGTCTTCCGGGCATTGGAGCAGCCCTTT...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGACAAAGAAAAAGGCACTaGCGAGGTCCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRQRKRH*RGPSGC
Trigger: GCAGCCACTGGGACCTCGGCAGTGCCTTTTTCTTTG...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCAAATACAAAAGATTTTaGCTCCTTCAGTGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTAKYKRF*LLQCSE
Trigger: CTCCGAGCACTGAAGGAGGCAAAATCTTTTGTATTT...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AAAACACACACACACACACACACAACGCTCAGTCCAAGACCAATGTCCTTCACAGCACACCGGTGCTGCTaGGGGAACGGCCACTTTAGG +
Preference number: 4 (lower is better)
Translates to: KTHTHTHTTLSPRPMSFTAHRCC*GNGHFR
Trigger: CCTAAAGTGGCCGTTCCCGCAGCAGCACCGGTGTGC...TGTGAAGGACATTGGTCTTGGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR GCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGCCTGAGATGGAAAGATaGCATGGTCCTCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVPEMER*HGPPQC
Trigger: ACACTGAGGAGGACCATGGCATCTTTCCATCTCAGG...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGACTGACGTTCATAAAGTaGCTAATCCTGTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARLTFIK*LILCLA
Trigger: GGCCAGGCACAGGATTAGGCACTTTATGAACGTCAG...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGTACCAGCCATGTACATaGTGTGTCACTCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQYQPCT*CVTLSG
Trigger: ACCTGAGAGAGTGACACACCATGTACATGGCTGGTA...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312350.9
CDS-3UTR CCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTGTGGCGCTCTTGGGCTaGCACACCGGTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGVALLG*HTGAAA
Trigger: CGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCAC...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACAGGTGCCTTCCATCCTaGCTACCACTGTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDRCLPS*LPLWLG
Trigger: CCCGAGCCACAGTGGTAGCCAGGATGGAAGGCACCT...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGCCACAACCACAAAGATaGCAACCACCGTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVPQPQR*QPPSST
Trigger: AGTGGAAGACGGTGGTTGCCATCTTTGTGGTTGTGG...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGCCTTCTCCAAGGCGATaGTATTCTTCTGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWPSPRR*YSSGCS
Trigger: AGAGCAGCCAGAAGAATACCATCGCCTTGGAGAAGG...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGAAGCATGTCCAGTGAGTaGGCCCGCTGGTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRSMSSE*ARWSRP
Trigger: GGGCCTGGACCAGCGGGCCCACTCACTGGACATGCT...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTGGTCTTTGGTGTCCGTaGGTATCATTCCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCGLWCP*VSFRSP
Trigger: TGGAGAACGGAATGATACCCACGGACACCAAAGACC...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGACTTCCATGGTACCAGTaGTTGAGGATGTCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARLPWYQ*LRMSWV
Trigger: TACCCACGACATCCTCAACCACTGGTACCATGGAAG...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAAGCCCACAGAAGGCACTaGATAAATGAGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: EPATCTDTLGVSCVCYLKAHRRH*INEREA
Trigger: GGCTTCCCTCTCATTTATCCAGTGCCTTCTGTGGGC...TTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGAAAGGAGGCCAGAGGCTaGCATGTGAGGTGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRKEARG*HVRWFA
Trigger: TGCAAACCACCTCACATGCCAGCCTCTGGCCTCCTT...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTAATCTCCGATCATACTaGGGACAGCTGCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCNLRSY*GQLQSR
Trigger: CCTACTTTGCAGCTGTCCTCAGTATGATCGGAGATT...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTACGTGGATCTCCACGCTaGGCCTTCGCCGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLRGSPR*AFAVSP
Trigger: GGGAGACACGGCGAAGGCTCAGCGTGGAGATCCACG...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCAGATGCTCTCCTGGGATaGGGCCTTGAAGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDADALLG*GLEAAG
Trigger: ACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATC...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGCGGGCAAGGTCTTTTTaGGGTCCTTGTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVRARSF*GPCFSS
Trigger: AGAGGAAAAACAAGGACCTCAAAAAGACCTTGCCCG...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCAGACGCACCCTGCCCATaGTTGTTCAGCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDADAPCP*LFSCSG
Trigger: GCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTC...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGTGAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATCCGTCAGCATGGCTGTaGTGGAGTTGTCTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SEPRTPITSNCLVLPGPNPSAWL*WSCLSY
Trigger: GTAACTCAGACAACTCCAGCACAGCCATGCTGACGG...ATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTTCCAACTCAGCGTGCTaGTGGATACAGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRSNSAC*WIQSVS
Trigger: GCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGA...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAAGGTCTAAGGAATAGCTaGCCTTGTCTACGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: EPATCTDTLGVSCVCYLKGLRNS*PCLRVC
Trigger: GCACACACGTAGACAAGGGCAGCTATTCCTTAGACC...TTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AAATGCTTTCACGTGTGGCCCAAAGAGCTAGCTGTGAACCAGCCAATTATGATAGCTTCCCAAAAGCGGTaGCGGCAGGTTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KCFHVWPKELAVNQPIMIASQKR*RQVRGC
Trigger: GCAGCCCCTAACCTGCCGGCACCGCTTTTGGGAAGC...TATCATAATTGGCTGGTTCACAGCTAGCTCTTTGGGCCACACGTGAAAGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR GCA 90 bp ATGGTACCAGTGGTTGAGGATGTCGTGGGTACAACTTTCCCTGGAGGTCAGAAACCCATAACCAGCAACTaGCTGGTGTTGCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: MVPVVEDVVGTTFPGGQKPITSN*LVLPGP
Trigger: TGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGG...TTTCTGACCTCCAGGGAAAGTTGTACCCACGACATCCTCAACCACTGGTACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTTACACAAAGACCTTGTaGCCTCTTGGTGGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCYTKTL*PLGGGD
Trigger: ATCTCCACCACCAAGAGGGCACAAGGTCTTTGTGTA...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTTCCAAAGTTTCCCTATaGAGAATTAACAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SCPCLRVCPGSTAQGYSTSKVSL*RINSIH
Trigger: GTGGATGCTGTTAATTCTGCATAGGGAAACTTTGGA...AGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTCCGCAGTTACCTTCTaGAGCATAGGTCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVSAVTF*SIGLLN
Trigger: ATTCAGCAGACCTATGCTGCAGAAGGTAACTGCGGA...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCCCACTGCGTCCTGGGTaGACTCGGTGGCAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: TEQQATGIMQGNCFGISTPLRPG*TRWQSA
Trigger: AGCGCTTTGCCACCGAGTGCACCCAGGACGCAGTGG...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTAGGTGCCTTCCATCCTaGCTACCACTGTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGRCLPS*LPLWLG
Trigger: CCCGAGCCACAGTGGTAGCCAGGATGGAAGGCACCT...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTTTGTTGATGCTCTCCTaGGATGAGGCCTTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTLLMLS*DEALKR
Trigger: CCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAA...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGGTTGAGGATGTCGTaGGTACAACTTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EPATCTDTLGVSCVCYLKWLRMS*VQLSLE
Trigger: CTCCAGGGAAAGTTGTACCCACGACATCCTCAACCA...TTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATTGCTAACAATGCTCTaGAGGCGCCACCAACATTCA +
Preference number: 4 (lower is better)
Translates to: EPATCTDTLGVSCVCYLKLLTML*RRHQHS
Trigger: TGAATGTTGGTGGCGCCTTCAGAGCATTGTTAGCAA...TTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312350.9
CDS-3UTR TCA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATCCGTCTTCCACTTCATaGCGGTCTGCAAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYPSSTS*RSASPL
Trigger: AAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGG...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCCCCGGAACTCAGCCGTaGCATTGGCCTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: TEQQATGIMQGNCFGISTPGTQP*HWPSTL
Trigger: CAGAGTGGAAGGCCAATGTCACGGCTGAGTTCCGGG...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCGATGCTCTCCTGGGATaGGGCCTTGAAGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSDALLG*GLEAAG
Trigger: ACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATC...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGCGGGCAAGGTCTTTTTaGGGTCCTTGTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMRARSF*GPCFSS
Trigger: AGAGGAAAAACAAGGACCTCAAAAAGACCTTGCCCG...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTGCTGGAGTTGTCTaGGTTACACATCTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVCAGVV*VTHLFR
Trigger: ACGGAAAAGATGTGTAACTCAGACAACTCCAGCACA...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGACATCGCCTCCCAAGTaGCTATTTATTACTGAGTCG +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVTSPPK*LFITES
Trigger: CGACTCAGTAATAAATAGTCACTTGGGAGGCGATGT...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTTCAAGCTCAGAGCCCTaGCAGCAAAAGAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRSSSEP*QQKRAS
Trigger: GGAAGCTCTCTTTTGCTGTCAGGGCTCTGAGCTTGA...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCCATAGTAAAACTCAACATCCACACCTGCATAAACATCGCCTCCCAAGTGACTAAAGGGCTGCTCCAATaGCCGGAAGACAAGACCGCC +
Preference number: 4 (lower is better)
Translates to: PIVKLNIHTCINIASQVTKGLLQ*PEDKTA
Trigger: GGCGGTCTTGTCTTCCGGGCATTGGAGCAGCCCTTT...AGTCACTTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAGTTTTACTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTTTTGCCTCCTTCAGTaGTCGGAGCAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVFCLLQ*SEQYSH
Trigger: ATGGGAATATTGCTCCGAGCACTGAAGGAGGCAAAA...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTTTTGCCTCCTTCAGTaGTCGGAGCAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWFCLLQ*SEQYSH
Trigger: ATGGGAATATTGCTCCGAGCACTGAAGGAGGCAAAA...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACCATACTGAGGACAGCTaGAAAGTAGGCAAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDHTEDS*KVGKAN
Trigger: GTTGGCCTTGCCTACTTTGCAGCTGTCCTCAGTATG...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCGACGCACCCTGCCCATaGTTGTTCAGCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSDAPCP*LFSCSG
Trigger: GCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTC...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTATTACTGAGTCGACACAGGATGTCACCAGTGAGCCTCATCTCCAGTCCAATGATGGAAGAGCCAAGCTaGTTCCCAAAAGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LLLSRHRMSPVSLISSPMMEEPS*FPKAVP
Trigger: CGGCACCGCTTTTGGGAAGCAGCTTGGCTCTTCCAT...CATTGGACTGGAGATGAGGCTCACTGGTGACATCCTGTGTCGACTCAGTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR GCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGAGCAGAGATGTGGAATaGAACACTGGCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWSRDVE*NTGWFF
Trigger: GAAAAACCAGCCAGTGTTGCATTCCACATCTCTGCT...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGGTCTTTGCACACAATTaGATCCTAACAGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NMYGQNRLRARTLLVCPAVFAHN*ILTVRK
Trigger: CTTTCTCACTGTTAGGATGCAATTGTGTGCAAAGAC...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGACTCAGCCACTGTCTTTaGACACAATTGCATCCTAAC +
Preference number: 4 (lower is better)
Translates to: TAQGYSTATEMPLTCTARLSHCL*TQLHPN
Trigger: GTTAGGATGCAATTGTGTGCAAAGACAGTGGCTGAG...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTGCATGTGAGGTGGTTTaGATATCACTTCTAGGCACC +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPACEVV*ISLLGT
Trigger: GGTGCCTAGAAGTGATATGCAAACCACCTCACATGC...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCCTGCAGCTCAAAACCTaGCCGGCTGGAGCGCACCAA +
Preference number: 4 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPLQLKT*PAGAHQ
Trigger: TTGGTGCGCTCCAGCCGGGCAGGTTTTGAGCTGCAG...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR GCA 90 bp AGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGAGGGCGCAAAGTCTCCCTaGACTCGCCGGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RKTRYDALNGWYQNSSSEGAKSP*TRRPPA
Trigger: TGCTGGGGGCCGGCGAGTGCAGGGAGACTTTGCGCC...CTCTGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGGTCAGTGTGATCACATaGACCCTTGCTAACAATGCT +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWVSVIT*TLANNA
Trigger: AGCATTGTTAGCAAGGGTCCATGTGATCACACTGAC...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312350.9
CDS-3UTR CCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATGTCTGCAAGCCCCCTTaGGAGGTGCCTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNVCKPP*EVPSIL
Trigger: CAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGAC...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCGTCTGCAAGCCCCCTTaGGAGGTGCCTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: TEQQATGIMQGNCFGISTVCKPP*EVPSIL
Trigger: CAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGAC...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACCCACAACCACAAAGATaGCAACCACCGTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDPQPQR*QPPSST
Trigger: AGTGGAAGACGGTGGTTGCCATCTTTGTGGTTGTGG...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGAGTGGCTGCTGTTGTTaGAAGAGTTTCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWSGCCC*KSFLLD
Trigger: GTCCAATAGGAAACTCTTCCAACAACAGCAGCCACT...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCGCTGCAGCTTATCGTaGATCTCCACGCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDRCSLS*ISTLSL
Trigger: AAGGCTCAGCGTGGAGATCCACGATAAGCTGCAGCG...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATCCATGCTGCGGATGGTaGCCGCCCGCTGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNPCCGW*PPAAAY
Trigger: ATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGG...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTCCATGCTGCGGATGGTaGCCGCCCGCTGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSPCCGW*PPAAAY
Trigger: ATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGG...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCCCTTGGACTGGCTCGTaGAGGAACCCCAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPPWTGS*RNPRKR
Trigger: TCTTTTTCTGGGGTTCCTCCACGAGCCAGTCCAAGG...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp AGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTAGCTCGCCAGTTCATGTaGACTACCTACCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RHTCFFQEAGLRNSCPCLARQFM*TTYPCE
Trigger: CTCACAGGGGTAGGTAGTCCACATGAACTGGCGAGC...TAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ATGGTACCAGTGGTTGAGGATGTCGTGGGTACAACTTTCCCTGGAGGTCAGAAAGGGACAGGTCTTCCATaGTACCAGTGGTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: MVPVVEDVVGTTFPGGQKGTGLP*YQWLRM
Trigger: CATCCTCAACCACTGGTACCATGGAAGACCTGTCCC...TTTCTGACCTCCAGGGAAAGTTGTACCCACGACATCCTCAACCACTGGTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTAGGTTTATGCTGGAATaGGAGTGCAGATTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCRFMLE*ECRLER
Trigger: CCTTTCCAATCTGCACTCCCATTCCAGCATAAACCT...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGAGGTTTATGCTGGAATaGGAGTGCAGATTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWRFMLE*ECRLER
Trigger: CCTTTCCAATCTGCACTCCCATTCCAGCATAAACCT...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCTTTCCCCGAGTTGGCTaGCTCCCTTACCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSFPRVG*LPYPLP
Trigger: GGGGAGGGGGTAAGGGAGCCAGCCAACTCGGGGAAA...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGCCGCCGCAACTTCCATaGCTATTGCTTCAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRPPQLP*LLLQAG
Trigger: ACCCGCCTGAAGCAATAGCCATGGAAGTTGCGGCGG...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR TCA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACAGACAAGACCGCCAGTaGCAAGGTAGACCACCACAA +
Preference number: 4 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDRQDRQ*QGRPPQ
Trigger: TTGTGGTGGTCTACCTTGTCACTGGCGGTCTTGTCT...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATACCACTCCCGATAATTaGTGCCAGCGTTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYTTPDN*CQRFPL
Trigger: CAGGGGGAAACGCTGGCATCAATTATCGGGAGTGGT...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCCTGGGATGAGGCCTTaGAGCGGCCGGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYPGMRP*SGRCPG
Trigger: CCCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGG...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AAATGCTTTCACGTGTGGCCCAAAGAGCTAGCTGTGAACCAGCCAATTATGATATGTTGGGCCGGTTGTTaGTGCTCTCCTGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: KCFHVWPKELAVNQPIMICWAGC*CSPGMR
Trigger: CCTCATCCCAGGAGAGCATCAACAACCGGCCCAACA...TATCATAATTGGCTGGTTCACAGCTAGCTCTTTGGGCCACACGTGAAAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGCATGGTACCAGTGGTTaGGGATGTCGTGGGTACAAC +
Preference number: 4 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQHGTSG*GCRGYN
Trigger: GTTGTACCCACGACATCCTCAACCACTGGTACCATG...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTGCTCTCATGGTACCAGTGGTTaGGGATGTCGTGGGTACAAC +
Preference number: 4 (lower is better)
Translates to: CTFSYVCSDLLPTNSRCSHGTSG*GCRGYN
Trigger: GTTGTACCCACGACATCCTCAACCACTGGTACCATG...AGAGCACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACGTTGGTGAAGTCCAATaGAGGTATGGTGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDVGEVQ*RYGAET
Trigger: TGTCTCTGCACCATACCTTCATTGGACTTCACCAAC...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGTGAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATGTATGGATGGGTTGGTaGAGTCCAATGAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: SEPRTPITSNCLVLPGPNVWMGW*SPMKVW
Trigger: CCATACCTTCATTGGACTTCACCAACCCATCCATAC...ATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTTGCACTGATGTCAACTaGCTTAGGGCAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRCTDVN*LRAGMR
Trigger: TCTCATGCCTGCCCTAAGTCAGTTGACATCAGTGCA...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGCGAGGTCCCAGTGGCTaGTGTTGTTGGAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQRGPSG*CCWKSF
Trigger: GAAACTCTTCCAACAACAGCAGCCACTGGGACCTCG...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTGACCTTCTCCACTCTTaGAATGCTTTTCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCDLLHS*NAFPKD
Trigger: ATCTTTGGGAAAAGCATTGCAAGAGTGGAGAAGGTC...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCATGGTGGCCGCCCGCTaGAGCTTATCGTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGMVAAR*SLSWIS
Trigger: GGAGATCCACGATAAGCTGCAGCGGGCGGCCACCAT...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTGGTCTAAGGAATAGCTaGCCTTGTCTACGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRGLRNS*PCLRVC
Trigger: GCACACACGTAGACAAGGGCAGCTATTCCTTAGACC...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATCCCATAACCAGCAACTaGCTGGTGTTGCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYPITSN*LVLPGP
Trigger: TGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGG...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGTGAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATCTCAACATCCACACCTaGATAAACATCGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SEPRTPITSNCLVLPGPNLNIHT*INIASQ
Trigger: TTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAG...ATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGGGAATTTTAACACACTaGTACAAAGAACGTACCAGA +
Preference number: 4 (lower is better)
Translates to: NMYGQNRLRARTLLVCPAGILTH*YKERTR
Trigger: TCTGGTACGTTCTTTGTAGCAGTGTGTTAAAATTCC...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGTTGGGGAAGCATCTATaGACATACCAACACATGCAC +
Preference number: 4 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMLGKHL*TYQHMH
Trigger: GTGCATGTGTTGGTATGTGCATAGATGCTTCCCCAA...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCTCGGTGGCAAAGCGCTaGTACCGGGCACGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFSVAKR*YRARVS
Trigger: AGAGACCCGTGCCCGGTAGCAGCGCTTTGCCACCGA...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTTCCTGGCTACCACTGTaGCTCGGGAGGAAATGGACA +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGSWLPL*LGRKWT
Trigger: TGTCCATTTCCTCCCGAGCCACAGTGGTAGCCAGGA...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATAGGTGCCTTCCATCCTaGCTACCACTGTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNRCLPS*LPLWLG
Trigger: CCCGAGCCACAGTGGTAGCCAGGATGGAAGGCACCT...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGTGAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATGGAAGAGTTTCCTATTaGACTGACTCCCGCATTGTC +
Preference number: 4 (lower is better)
Translates to: SEPRTPITSNCLVLPGPNGRVSY*TDSRIV
Trigger: GACAATGCGGGAGTCAGTCCAATAGGAAACTCTTCC...ATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGAAGATGGTTCCAAGTTaGTCTCCAATTCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWKMVPS*SPIPAN
Trigger: ATTGGCTGGAATTGGAGACCAACTTGGAACCATCTT...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TTATTACTGAGTCGACACAGGATGTCACCAGTGAGCCTCATCTCCAGTCCAATGAACTCAGCGTGCTGCTaGATACAGTCCGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: LLLSRHRMSPVSLISSPMNSACC*IQSVSM
Trigger: CATGCTGACGGACTGTATCCAGCAGCACGCTGAGTT...CATTGGACTGGAGATGAGGCTCACTGGTGACATCCTGTGTCGACTCAGTAATAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGACCGGCTCCCGGTCTTTaGTGTCCGTGGGTATCATTC +
Preference number: 4 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRPAPGL*CPWVSF
Trigger: GAATGATACCCACGGACACCAAAGACCGGGAGCCGG...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATGGGGGAGCCTTGGACTaGCTCGTGGAGGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYGGALD*LVEEPQ
Trigger: CTGGGGTTCCTCCACGAGCCAGTCCAAGGCTCCCCC...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTGGGTACAACTTTCCCTaGAGGTCAGAAAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPGYNFP*RSESMR
Trigger: TCTCATGCTTTCTGACCTCCAGGGAAAGTTGTACCC...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp AGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTaGTGCCCTCTTGGTGGTGGAGATTCCACCATATCT +
Preference number: 4 (lower is better)
Translates to: RGNPLSHVYTKT*CPLGGGDSTIS
Trigger: AGATATGGTGGAATCTCCACCACCAAGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp AGGATAGAGAGAGCCTACACAGGGCATGATCCGAATTaGGACACCAGTCTCCCAAGTACATCTGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RIERAYTGHDPN*DTSLPSTSGLH
Trigger: ATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCCCTGTGTAGGCTCTCTCTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGGGCTCACACAGACATaGTCCCGCAGGAATTCCGCC +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEGLTQT*SRRNSA
Trigger: GGCGGAATTCCTGCGGGATCATGTCTGTGTGAGCCC...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCGGGCTCACACAGACATaGTCCCGCAGGAATTCCGCC +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFGLTQT*SRRNSA
Trigger: GGCGGAATTCCTGCGGGATCATGTCTGTGTGAGCCC...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTGCTCTGATGAACAGGATGGTTaGGATGACCCGGATCTTGGT +
Preference number: 4 (lower is better)
Translates to: CTFSYVCSDLLPTNSRCSDEQDG*DDPDLG
Trigger: ACCAAGATCCGGGTCATCTCAACCATCCTGTTCATC...AGAGCACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AAAACACACACACACACACACACAACGCTCAGTCCAAGACCAATGTCCTTCACACCACCGTGGTCAGAGTaGCCACCACAAAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: KTHTHTHTTLSPRPMSFTPPWSE*PPQSKW
Trigger: CCATTTACTTTGTGGTGGTCACTCTGACCACGGTGG...TGTGAAGGACATTGGTCTTGGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGACTGCCGCATGGGCCTTaGTTTCACCCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRLPHGP*FHPPLL
Trigger: AAGAAGAGGTGGGTGAAATCAAGGCCCATGCGGCAG...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTGTGCTGGAGTTGTCTaGGTTACACATCTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDCAGVV*VTHLFR
Trigger: ACGGAAAAGATGTGTAACTCAGACAACTCCAGCACA...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTTGTCATTGGTTAAGGTaGTATCCACAGTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPCHWLR*YPQCDV
Trigger: CACATCACACTGTGGATATCACCTTAACCAATGACA...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGGTCCAATGGAGGAGTTaGCTTAGACCTTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQVQWRS*LRPSLD
Trigger: GTCCAAGGAAGGTCTAAGTCAACTCCTCCATTGGAC...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AAATGCTTTCACGTGTGGCCCAAAGAGCTAGCTGTGAACCAGCCAATTATGATAAAAGACAGCCCCCACTaGAGATGGTGGACGTGTGCT +
Preference number: 4 (lower is better)
Translates to: KCFHVWPKELAVNQPIMIKDSPH*RWWTCA
Trigger: AGCACACGTCCACCATCTTCAGTGGGGGCTGTCTTT...TATCATAATTGGCTGGTTCACAGCTAGCTCTTTGGGCCACACGTGAAAGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCGTGCCTGCTTGCCAGTaGAGCAAAAGACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSVPACQ*SKRQPP
Trigger: TGGGGGCTGTCTTTTGCTTCACTGGCAAGCAGGCAC...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGAAACTACAATGGCCCTTaGCAAGTATCTGTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRNYNGP*QVSVLN
Trigger: GTTGAGCACAGATACTTGTCAAGGGCCATTGTAGTT...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAGTTGGTGAAGTCCAATaGAGGTATGGTGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLVGEVQ*RYGAET
Trigger: TGTCTCTGCACCATACCTTCATTGGACTTCACCAAC...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCCACTTCATGACGGTCTaGAAGCCCCCTTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGHFMTV*KPPWEV
Trigger: CACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTG...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCAAAGGGCTGCTCCAATaGCCGGAAGACAAGACCGCC +
Preference number: 4 (lower is better)
Translates to: SLLSPLHPLRKMHDWPLTKGLLQ*PEDKTA
Trigger: GGCGGTCTTGTCTTCCGGGCATTGGAGCAGCCCTTT...GGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AAATGCTTTCACGTGTGGCCCAAAGAGCTAGCTGTGAACCAGCCAATTATGATACTGCTCTCAAAGGGCTaGTCCAATGCCCGGAAGACA +
Preference number: 4 (lower is better)
Translates to: KCFHVWPKELAVNQPIMILLSKG*SNARKT
Trigger: TGTCTTCCGGGCATTGGAGCAGCCCTTTGAGAGCAG...TATCATAATTGGCTGGTTCACAGCTAGCTCTTTGGGCCACACGTGAAAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCCATAGTAAAACTCAACATCCACACCTGCATAAACATCGCCTCCCAAGTGACTCGAGGTCCCAGTGGCTaGTGTTGTTGGAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PIVKLNIHTCINIASQVTRGPSG*CCWKSF
Trigger: GAAACTCTTCCAACAACAGCAGCCACTGGGACCTCG...AGTCACTTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAGTTTTACTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGAAATACAAAAGATTTTaGCTCCTTCAGTGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVKYKRF*LLQCSE
Trigger: CTCCGAGCACTGAAGGAGGCAAAATCTTTTGTATTT...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTATTGGCCTTCCACTCTaGCGCATGGGCCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGIGLPL*RMGLDF
Trigger: GAAATCAAGGCCCATGCGGCAGAGTGGAAGGCCAAT...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTCCTCGGACGCACCCTaGCCATGCTTGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWSSDAP*PCLFSC
Trigger: GCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGA...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATCCGTCAGCATGGCTGTaGTGGAGTTGTCTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINPSAWL*WSCLSY
Trigger: GTAACTCAGACAACTCCAGCACAGCCATGCTGACGG...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCCCTTGTCTACGTGTGTaGCCAGGTAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSPCLRV*PGSTAQ
Trigger: CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAGTCCCCTTCTGTGTGTaGACATATTACTACGACTCC +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLVPFCV*TYYYDS
Trigger: GGAGTCGTAGTAATATGTGCACACACAGAAGGGGAC...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACACGTGTGCTCTGATCTaGTTCCAACAAATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDTCALI*FQQIPG
Trigger: ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGT...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGGTTGCCAGGTCCAAATaGTTTCACGTGTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQVARSK*FHVWPK
Trigger: TTTGGGCCACACGTGAAAGCATTTGGACCTGGCAAC...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTAGATGGGACTTCATGTaGTCCAGGCAGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGRWDFM*SRQGRA
Trigger: AGCTCTTCCCTGCCTGGAGCACATGAAGTCCCATCT...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTACTCCCTCCCTTGATGTaGAGACAAGGTAACAAGAGA +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLLPPLM*RQGNKR
Trigger: TCTCTTGTTACCTTGTCTGCACATCAAGGGAGGGAG...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCCTCCCTCCCTTGATGTaGAGACAAGGTAACAAGAGA +
Preference number: 4 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPLPPLM*RQGNKR
Trigger: TCTCTTGTTACCTTGTCTGCACATCAAGGGAGGGAG...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTATCCGCAGTTACCTTCTaGAGCATAGGTCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLSAVTF*SIGLLN
Trigger: ATTCAGCAGACCTATGCTGCAGAAGGTAACTGCGGA...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTGGCACACCGGTGCTaGTGCGGGAACGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYLAHRC*CGNGHQ
Trigger: TTGGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAG...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGTGGCTCGGGAGGAAATaGACAGGCGCGGAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEWLGRK*TGAELE
Trigger: CTCCAACTCCGCGCCTGTCCATTTCCTCCCGAGCCA...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGATCCTGGCTACCACTGTaGCTCGGGAGGAAATGGACA +
Preference number: 4 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRSWLPL*LGRKWT
Trigger: TGTCCATTTCCTCCCGAGCCACAGTGGTAGCCAGGA...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGAAGTGGCTGCTGTTGTTaGAAGAGTTTCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRSGCCC*KSFLLD
Trigger: GTCCAATAGGAAACTCTTCCAACAACAGCAGCCACT...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTTGTTGATGCTCTCCTaGGATGAGGCCTTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRLLMLS*DEALKR
Trigger: CCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAA...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATTACAGTCCGTCAGCATaGCTGTGCTGGAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYYSPSA*LCWSCL
Trigger: CAGACAACTCCAGCACAGCCATGCTGACGGACTGTA...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCAGGATGGGGGAGCCTTaGACTGGCTCGTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFRMGEP*TGSWRN
Trigger: GTTCCTCCACGAGCCAGTCCAAGGCTCCCCCATCCT...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTACAAAAAGCCCTGAGATaGAAAGATGCCATGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLQKALR*KDAMVL
Trigger: GAGGACCATGGCATCTTTCCATCTCAGGGCTTTTTG...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATCAGAGCCTAAAGGTCTaGGGACAGGGAGATGGGACT +
Preference number: 4 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNQSLKV*GQGDGT
Trigger: AGTCCCATCTCCCTGTCCCCAGACCTTTAGGCTCTG...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGATTTGGCCGTAGGGCCTaGAATTTTAACACACTGCTA +
Preference number: 4 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRFGRRA*NFNTLL
Trigger: TAGCAGTGTGTTAAAATTCCAGGCCCTACGGCCAAA...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGGTTGAAAGCAGACTTTaGTCAGACTTTGAATACCAG +
Preference number: 4 (lower is better)
Translates to: NALNMYGQNRLRARTLLVVESRL*SDFEYQ
Trigger: CTGGTATTCAAAGTCTGACCAAAGTCTGCTTTCAAC...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTTGTTCATCACATTCTTaGCCAAATGTCTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: PGSTAQGYSTATEMPLTCCSSHS*PNVSGN
Trigger: ATTCCCTGAGACATTTGGCCAAGAATGTGATGAACA...ACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTACAGGCTATGACTGCTaGAACACAAATAGTCCTAGT +
Preference number: 4 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPTGYDC*NTNSPS
Trigger: ACTAGGACTATTTGTGTTCCAGCAGTCATAGCCTGT...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGTCTCACCAAATCCAGTaGGTAAAAACCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQSHQIQ*VKTSPT
Trigger: GGTGGGGCTGGTTTTTACCCACTGGATTTGGTGAGA...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCAAGGAGGCCAGAGGCTaGCATGTGAGGTGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPKEARG*HVRWFA
Trigger: TGCAAACCACCTCACATGCCAGCCTCTGGCCTCCTT...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCTCTGTGACTCTGGGATaGGAAGGAGGCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSSVTLG*EGGQRL
Trigger: CAGCCTCTGGCCTCCTTCCCATCCCAGAGTCACAGA...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTGAAGTTTCCCCGAGTTaGCTGGCTCCCTTACCCCCT +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGEVSPS*LAPLPP
Trigger: AGGGGGTAAGGGAGCCAGCCAACTCGGGGAAACTTC...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCATTAATGAATGCCGTGTaGCCCGGCATGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDALMNAV*PGMGRL
Trigger: CAGCCTTCCCATGCCGGGCCACACGGCATTCATTAA...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGCGGCCACTGCGTCCTaGGTGCACTCGGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSAATAS*VHSVAK
Trigger: CTTTGCCACCGAGTGCACCCAGGACGCAGTGGCCGC...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
3UTR CAA 72 bp GTCCTCAGAACCCAGCATGCAAATAGACAGGCAGCATaGACGAAGCCAGGAAATGATATCATCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VLRTQHANRQAA*TKPGNDIISEG
Trigger: TCCCTCTGAGATGATATCATTTCCTGGCTTCGTCAATGCTGCCTGTCTATTTGCATGCTGGGTTCTGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGAGTTTCCTATTGGACTaGCTCCCGCATTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQSFLLD*LPHCQH
Trigger: ATGCTGACAATGCGGGAGTCAGTCCAATAGGAAACT...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGACCACCGTGGTCAGAGTaGCCACCACAAAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRPPWSE*PPQSKW
Trigger: CCATTTACTTTGTGGTGGTCACTCTGACCACGGTGG...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTGCTCTAATCTCCGATCATACTaGGGACAGCTGCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: CTFSYVCSDLLPTNSRCSNLRSY*GQLQSR
Trigger: CCTACTTTGCAGCTGTCCTCAGTATGATCGGAGATT...AGAGCACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGATGCTCTCCTGGGATaGGGCCTTGAAGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSDALLG*GLEAAG
Trigger: ACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATC...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTATTACTGAGTCGACACAGGATGTCACCAGTGAGCCTCATCTCCAGTCCAATGCGGGCAAGGTCTTTTTaGGGTCCTTGTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLLSRHRMSPVSLISSPMRARSF*GPCFSS
Trigger: AGAGGAAAAACAAGGACCTCAAAAAGACCTTGCCCG...CATTGGACTGGAGATGAGGCTCACTGGTGACATCCTGTGTCGACTCAGTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCTGTGCTGGAGTTGTCTaGGTTACACATCTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPCAGVV*VTHLFR
Trigger: ACGGAAAAGATGTGTAACTCAGACAACTCCAGCACA...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTATCTCCGCTAGTGCTGTaGTCTTTTGGTAAATCCACA +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLSPLVL*SFGKST
Trigger: TGTGGATTTACCAAAAGATCACAGCACTAGCGGAGA...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATACAGGATGTCACCAGTaGGCCTCATCTCCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNTGCHQ*ASSPVQ
Trigger: TTGGACTGGAGATGAGGCTCACTGGTGACATCCTGT...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGGCCCAAGGTTATGTTTaGTCCCTCTGTGTGACTGAT +
Preference number: 4 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQAQGYV*SLCVTD
Trigger: ATCAGTCACACAGAGGGATCAAACATAACCTTGGGC...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGTGCCTGCTTGCCAGTaGAGCAAAAGACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEVPACQ*SKRQPP
Trigger: TGGGGGCTGTCTTTTGCTTCACTGGCAAGCAGGCAC...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AAAACACACACACACACACACACAACGCTCAGTCCAAGACCAATGTCCTTCACACTCAACTCCCTCCCTTaGTGTGCAGACAAGGTAACA +
Preference number: 4 (lower is better)
Translates to: KTHTHTHTTLSPRPMSFTLNSLP*CADKVT
Trigger: TGTTACCTTGTCTGCACATCAAGGGAGGGAGTTGAG...TGTGAAGGACATTGGTCTTGGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATCTCAACTCCCTCCCTTaGTGTGCAGACAAGGTAACA +
Preference number: 4 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINLNSLP*CADKVT
Trigger: TGTTACCTTGTCTGCACATCAAGGGAGGGAGTTGAG...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ATGGTACCAGTGGTTGAGGATGTCGTGGGTACAACTTTCCCTGGAGGTCAGAAAAACTACAATGGCCCTTaGCAAGTATCTGTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: MVPVVEDVVGTTFPGGQKNYNGP*QVSVLN
Trigger: GTTGAGCACAGATACTTGTCAAGGGCCATTGTAGTT...TTTCTGACCTCCAGGGAAAGTTGTACCCACGACATCCTCAACCACTGGTACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCTTTTGCCTCCTTCAGTaGTCGGAGCAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPFCLLQ*SEQYSH
Trigger: ATGGGAATATTGCTCCGAGCACTGAAGGAGGCAAAA...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTGACCTTCTCCACTCTTaGAATGCTTTTCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTDLLHS*NAFPKD
Trigger: ATCTTTGGGAAAAGCATTGCAAGAGTGGAGAAGGTC...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTAGTCCCCTTCTGTGTGTaGACATATTACTACGACTCC +
Preference number: 4 (lower is better)
Translates to: RHTCFFQEAGLRNSCPCLVPFCV*TYYYDS
Trigger: GGAGTCGTAGTAATATGTGCACACACAGAAGGGGAC...TAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTCTCATGAGAAAAGCAATTaGACCTTTTCGTACGTGTGC +
Preference number: 4 (lower is better)
Translates to: CLQGQPFEPCLHKDLVPSHEKSN*TFSYVC
Trigger: GCACACGTACGAAAAGGTGCAATTGCTTTTCTCATG...AGAGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTGATTGGAAATTTCATTaGTTCGTTGCCCAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRDWKFH*FVAQKG
Trigger: CCCCTTCTGGGCAACGAAGCAATGAAATTTCCAATC...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR GCA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTAAGCCACTGGCATCATaGAAGGCAATTGTTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPKPLAS*KAIVLV
Trigger: TACCAAAACAATTGCCTTGCATGATGCCAGTGGCTT...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACGGCAGGGAAGAGCTGTaGATTTTTGAGAAATGGGCA +
Preference number: 4 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDGREEL*IFEKWA
Trigger: TGCCCATTTCTCAAAAATGCACAGCTCTTCCCTGCC...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCAGATGGGACTTCATGTaGTCCAGGCAGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TEQQATGIMQGNCFGISTRWDFM*SRQGRA
Trigger: AGCTCTTCCCTGCCTGGAGCACATGAAGTCCCATCT...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGCACTTTCTTGCTGTGTaGCATTGGATAAATAACATA +
Preference number: 4 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQHFLAV*HWINNI
Trigger: TATGTTATTTATCCAATGGCACACAGCAAGAAAGTG...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTTTTCTCCTAGGTTTATaGTGGAATGGGAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTFLLGL*WNGSAD
Trigger: ATCTGCACTCCCATTCCAGCATAAACCTAGGAGAAA...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGACACTCTATACAGCCCTaGCCCAAAGTGATAAATATC +
Preference number: 4 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRHSIQP*PKVINI
Trigger: GATATTTATCACTTTGGGGCAGGGCTGTATAGAGTG...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCCACCACTTTAATGAATaGCGTGTGGCCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: SLLSPLHPLRKMHDWPLTHHFNE*RVARHG
Trigger: CCCATGCCGGGCCACACGGCATTCATTAAAGTGGTG...GGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGTTCTGTCTCCCTCTGTaGCGCCGCAACTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEFCLPL*RRNFHG
Trigger: GCCATGGAAGTTGCGGCGGCACAGAGGGAGACAGAA...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp AGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTAGGAAGAGTTTCCTATTaGACTGACTCCCGCATTGTC +
Preference number: 4 (lower is better)
Translates to: RHTCFFQEAGLRNSCPCLGRVSY*TDSRIV
Trigger: GACAATGCGGGAGTCAGTCCAATAGGAAACTCTTCC...TAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGCTGCCGAGGTCCCAGTaGCTGCTGTTGTTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWLPRSQ*LLLLEE
Trigger: CTCTTCCAACAACAGCAGCCACTGGGACCTCGGCAG...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCCCACCACAAAGTAAATaGACTCCAAGGCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TEQQATGIMQGNCFGISTPPQSK*TPRPSS
Trigger: GCTGGACGGCCTTGGAGTCCATTTACTTTGTGGTGG...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTTTCCACTCTGCCGCATaGGCCTTGATTTCACCCACC +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGFHSAA*ALISPT
Trigger: GGTGGGTGAAATCAAGGCCCATGCGGCAGAGTGGAA...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATTTGTTGATGCTCTCCTaGGATGAGGCCTTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNLLMLS*DEALKR
Trigger: CCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAA...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCTACAGTCCGTCAGCATaGCTGTGCTGGAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPYSPSA*LCWSCL
Trigger: CAGACAACTCCAGCACAGCCATGCTGACGGACTGTA...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATGTGCACGGACACTCTTaGTGTGTCCTGCGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNVHGHS*CVLRLL
Trigger: TAGCAAACGCAGGACACACCAAGAGTGTCCGTGCAC...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTGCTCGCCAGTTCATGTaGACTACCTACCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGARQFM*TTYPCE
Trigger: CTCACAGGGGTAGGTAGTCCACATGAACTGGCGAGC...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCGTGCCCTCTTGGTGGTaGAGATTCCACCATATCTGC +
Preference number: 4 (lower is better)
Translates to: TEQQATGIMQGNCFGISTVPSWW*RFHHIC
Trigger: GCAGATATGGTGGAATCTCCACCACCAAGAGGGCAC...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AAAACACACACACACACACACACAACGCTCAGTCCAAGACCAATGTCCTTCACACTTGTGCCCTCTTGGTaGTGGAGATTCCACCATATC +
Preference number: 4 (lower is better)
Translates to: KTHTHTHTTLSPRPMSFTLVPSW*WRFHHI
Trigger: GATATGGTGGAATCTCCACCACCAAGAGGGCACAAG...TGTGAAGGACATTGGTCTTGGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTACTGCACAACTACAATaGCCCTTGACAAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTTAQLQ*PLTSIC
Trigger: ACAGATACTTGTCAAGGGCCATTGTAGTTGTGCAGT...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGCTGCCGCATGGGCCTTaGTTTCACCCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWLPHGP*FHPPLL
Trigger: AAGAAGAGGTGGGTGAAATCAAGGCCCATGCGGCAG...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATTGTTGGGCCGGTTGTTaGTGCTCTCCTGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYCWAGC*CSPGMR
Trigger: CCTCATCCCAGGAGAGCATCAACAACCGGCCCAACA...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTTGTTTTTCCTCTTGGTaGGTCTGGAGGTGGACCCGA +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGCFSSW*VWRWTR
Trigger: TCGGGTCCACCTCCAGACTCACCAAGAGGAAAAACA...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTCCTGCGTTTGCTATCTaGAATGAAGTTCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRPAFAI*NEVLVL
Trigger: GAGAACAAGAACTTCATTTCAGATAGCAAACGCAGG...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTGTACAGCACTGCCACTaGAATGCCCTTAACATGTAC +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGVQHCH*NALNMY
Trigger: GTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTAC...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATGTACAGCACTGCCACTaGAATGCCCTTAACATGTAC +
Preference number: 4 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINVQHCH*NALNMY
Trigger: GTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTAC...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAACTAGGTATGATGCACTaGATGGTTGGTATCAAAATT +
Preference number: 4 (lower is better)
Translates to: EPATCTDTLGVSCVCYLKLGMMH*MVGIKI
Trigger: AATTTTGATACCAACCATTCAGTGCATCATACCTAG...TTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATCACCATTGCACCCACTaGGGAAAATGCATGATTGGC +
Preference number: 4 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNHHCTH*GKCMIG
Trigger: GCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTG...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTCATCATGCAACCTATaGCTAGCCATTCCCCGACTT +
Preference number: 4 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRSSCNL*LAIPRL
Trigger: AAGTCGGGGAATGGCTAGTCATAGGTTGCATGATGA...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACACATCGCCTCCCAAGTaGCTATTTATTACTGAGTCG +
Preference number: 4 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDTSPPK*LFITES
Trigger: CGACTCAGTAATAAATAGTCACTTGGGAGGCGATGT...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGAGCAGGGGCAACCCTTTaGGCCATGTTTACACAAAGA +
Preference number: 4 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRAGATL*AMFTQR
Trigger: TCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGC...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTAGCCTACACAGGGCATaGTCCGAATTTGGACACCAG +
Preference number: 4 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSSLHRA*SEFGHQ
Trigger: CTGGTGTCCAAATTCGGATCATGCCCTGTGTAGGCT...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCATGAGCCCTCCCGGTaGCAGTACACTAAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGHEPSR*QYTKEL
Trigger: TAGCTCTTTAGTGTACTGTCACCGGGAGGGCTCATG...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTTCAAGCTCAGAGCCCTaGCAGCAAAAGAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGSSSEP*QQKRAS
Trigger: GGAAGCTCTCTTTTGCTGTCAGGGCTCTGAGCTTGA...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCTGGTATTCTTCTGGCTaGTCTCAAAGGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TEQQATGIMQGNCFGISTWYSSG*SQRAAP
Trigger: TGGAGCAGCCCTTTGAGAGCAGCCAGAAGAATACCA...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCATTGGCCTTCCACTCTaGCGCATGGGCCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSIGLPL*RMGLDF
Trigger: GAAATCAAGGCCCATGCGGCAGAGTGGAAGGCCAAT...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGTCCAACTCAGCGTGCTaGTGGATACAGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQESNSAC*WIQSVS
Trigger: GCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGA...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATTCATGTTTTCACCACTaGTCGCCAGTTCATGTGGAC +
Preference number: 4 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYSCFHH*SPVHVD
Trigger: GTCCACATGAACTGGCGAGCAGTGGTGAAAACATGA...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCAGTTGCCAGGTCCAAATaGTTTCACGTGTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDAVARSK*FHVWPK
Trigger: TTTGGGCCACACGTGAAAGCATTTGGACCTGGCAAC...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTTGTACAGTAGGTGTCTaGAGGGGCAACCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSCTVGV*RGNPLS
Trigger: GCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACA...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCGAAAAATTCAGTGCCTaGTTGCCAGTGAAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPEKFSA*LPVKQK
Trigger: CTTTTGCTTCACTGGCAAGCAGGCACTGAATTTTTC...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGACAAGTATCTGTaGTCAACTCCCTCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDLDKYL*STPSLD
Trigger: ATCAAGGGAGGGAGTTGAGCACAGATACTTGTCAAG...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACGTTTCATTAGAGAACTaGACAACTACAATGGCCCTT +
Preference number: 4 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDVSLEN*TTTMAL
Trigger: AAGGGCCATTGTAGTTGTGCAGTTCTCTAATGAAAC...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGAGTTTCATTAGAGAACTaGACAACTACAATGGCCCTT +
Preference number: 4 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRVSLEN*TTTMAL
Trigger: AAGGGCCATTGTAGTTGTGCAGTTCTCTAATGAAAC...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCTGGTACACACTGGATaGTTCATATTCTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTLVHTG*FIFSPN
Trigger: ATTTGGTGAGAATATGAAGCATCCAGTGTGTACCAG...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCGCGATGGTATTCTTCTaGCTGCTCTCAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGAMVFF*LLSKGC
Trigger: GCAGCCCTTTGAGAGCAGCCAGAAGAATACCATCGC...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCGCATCAAGAGCATGCTaGATCAACGTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGASRAC*INVSSS
Trigger: GGAGCTGGAGACGTTGATCCAGCATGCTCTTGATGC...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGCGCTGCAGCTTATCGTaGATCTCCACGCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQERCSLS*ISTLSL
Trigger: AAGGCTCAGCGTGGAGATCCACGATAAGCTGCAGCG...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCAACTCAGCGTGCTGCTaGATACAGTCCGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGNSACC*IQSVSM
Trigger: CATGCTGACGGACTGTATCCAGCAGCACGCTGAGTT...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAACTCAGCGTGCTGCTaGATACAGTCCGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSNSACC*IQSVSM
Trigger: CATGCTGACGGACTGTATCCAGCAGCACGCTGAGTT...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCGTGCACGGACACTCTTaGTGTGTCCTGCGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: SLLSPLHPLRKMHDWPLTVHGHS*CVLRLL
Trigger: TAGCAAACGCAGGACACACCAAGAGTGTCCGTGCAC...GGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGAAGGCTTGGGGAGATaGAAGAGCCAAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEEGLGR*KSQAAS
Trigger: GGAAGCAGCTTGGCTCTTCCATCTCCCCAAGCCTTC...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTATGGAGAGGAAGGCTTaGGGAGATGGAAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSMERKA*GDGRAK
Trigger: CTTGGCTCTTCCATCTCCCCAAGCCTTCCTCTCCAT...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGGGTACAACTTTCCCTaGAGGTCAGAAAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYGYNFP*RSESMR
Trigger: TCTCATGCTTTCTGACCTCCAGGGAAAGTTGTACCC...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTGGGACAGGTCTTCCATaGTACCAGTGGTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGGTGLP*YQWLRM
Trigger: CATCCTCAACCACTGGTACCATGGAAGACCTGTCCC...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTAGTGCCCTCTTGGTGGTaGAGATTCCACCATATCTGC +
Preference number: 4 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLVPSWW*RFHHIC
Trigger: GCAGATATGGTGGAATCTCCACCACCAAGAGGGCAC...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCCATAGTAAAACTCAACATCCACACCTGCATAAACATCGCCTCCCAAGTGACTCTCCTAGGTTTATGCTaGAATGGGAGTGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: PIVKLNIHTCINIASQVTLLGLC*NGSADW
Trigger: CCAATCTGCACTCCCATTCCAGCATAAACCTAGGAG...AGTCACTTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAGTTTTACTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAACCCCAGTCATCTCTaGCAACGAAGTTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSNPSHL*QRSFPE
Trigger: CTCGGGGAAACTTCGTTGCCAGAGATGACTGGGGTT...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR TCA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATTCTCAGGTGTCAGTGTaGTCACATGGACCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNSQVSV*SHGPLL
Trigger: TAGCAAGGGTCCATGTGATCACACTGACACCTGAGA...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312350.9
CDS-3UTR TCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGAGACAAGACCGCCAGTaGCAAGGTAGACCACCACAA +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWRQDRQ*QGRPPQ
Trigger: TTGTGGTGGTCTACCTTGTCACTGGCGGTCTTGTCT...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCGATGAACAGGATGGTTaGGATGACCCGGATCTTGGT +
Preference number: 4 (lower is better)
Translates to: SLLSPLHPLRKMHDWPLTDEQDG*DDPDLG
Trigger: ACCAAGATCCGGGTCATCTCAACCATCCTGTTCATC...GGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGAAATCTCCGATCATACTaGGGACAGCTGCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRNLRSY*GQLQSR
Trigger: CCTACTTTGCAGCTGTCCTCAGTATGATCGGAGATT...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCGACTACCTACCCCTGTaGGAAAGACCAAACTCAGCA +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGDYLPL*ERPNSA
Trigger: TGCTGAGTTTGGTCTTTCTCACAGGGGTAGGTAGTC...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTATGCAGCTTAGTGCTTTaGACTATTTTATTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLCSLVL*TILFLL
Trigger: CAGCAGGAATAAAATAGTTCAAAGCACTAAGCTGCA...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATAAAGACAGCCCCCACTaGAGATGGTGGACGTGTGCT +
Preference number: 4 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYKDSPH*RWWTCA
Trigger: AGCACACGTCCACCATCTTCAGTGGGGGCTGTCTTT...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGACGAAGCCAGGAAATaGTATCATCTCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNDEARK*YHLRGR
Trigger: CCTCCCTCTGAGATGATATCATTTCCTGGCTTCGTC...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTGACGAAGCCAGGAAATaGTATCATCTCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSDEARK*YHLRGR
Trigger: CCTCCCTCTGAGATGATATCATTTCCTGGCTTCGTC...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGAAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGAGGCTGGCATGTaGGGTGGTTTGCATATCACT +
Preference number: 4 (lower is better)
Translates to: RKAIAPFRTCALICFQQIPEAGM*GGLHIT
Trigger: AGTGATATGCAAACCACCTCACATGCCAGCCTCTGG...AATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATTGGTATTCTTCTGGCTaGTCTCAAAGGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNWYSSG*SQRAAP
Trigger: TGGAGCAGCCCTTTGAGAGCAGCCAGAAGAATACCA...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGATCTTCTTTGATTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGCAAAGAAAAAGGCACTaGCGAGGTCCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RIFFDFVHHILGQMSQGMQRKRH*RGPSGC
Trigger: GCAGCCACTGGGACCTCGGCAGTGCCTTTTTCTTTG...CATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATCATACTGAGGACAGCTaGAAAGTAGGCAAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNHTEDS*KVGKAN
Trigger: GTTGGCCTTGCCTACTTTGCAGCTGTCCTCAGTATG...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCCAGAACCGGCTACGTaGACGGACACTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYPEPAT*TDTLGV
Trigger: CACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGG...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAACCTTGTCTACGTGTGTaGCCAGGTAGCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RSMDSLIRKLRLVRITEEPCLRV*PGSTAQ
Trigger: CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCAGGGTCTCATAAGCAATaGCAGAACTTCAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDAGSHKQ*QNFNRA
Trigger: GGCTCTGTTGAAGTTCTGGCATTGCTTATGAGACCC...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTACTGACGTTCATAAAGTaGCTAATCCTGTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLLTFIK*LILCLA
Trigger: GGCCAGGCACAGGATTAGGCACTTTATGAACGTCAG...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTTGGGGAAGCATCTATaGACATACCAACACATGCAC +
Preference number: 4 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRLGKHL*TYQHMH
Trigger: GTGCATGTGTTGGTATGTGCATAGATGCTTCCCCAA...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTAATCACAGGCTATGACTaGTGGAACACAAATAGTCCT +
Preference number: 4 (lower is better)
Translates to: RHTCFFQEAGLRNSCPCLITGYD*WNTNSP
Trigger: AGGACTATTTGTGTTCCAGCAGTCATAGCCTGTGAT...TAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTAGCAGAGATGTGGAATaGAACACTGGCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGSRDVE*NTGWFF
Trigger: GAAAAACCAGCCAGTGTTGCATTCCACATCTCTGCT...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCGTCTTTGCACACAATTaGATCCTAACAGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPVFAHN*ILTVRK
Trigger: CTTTCTCACTGTTAGGATGCAATTGTGTGCAAAGAC...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATCTCAGCCACTGTCTTTaGACACAATTGCATCCTAAC +
Preference number: 4 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINLSHCL*TQLHPN
Trigger: GTTAGGATGCAATTGTGTGCAAAGACAGTGGCTGAG...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTACTTCTAGGCACCACTaGACCTTCTCCCTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGTSRHH*TFSLQA
Trigger: AGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGT...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCGCATGTGAGGTGGTTTaGATATCACTTCTAGGCACC +
Preference number: 4 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPACEVV*ISLLGT
Trigger: GGTGCCTAGAAGTGATATGCAAACCACCTCACATGC...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAACTGGTGGAAAGAGACTaGCTAGCGTTCCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RSMDSLIRKLRLVRITEELVERD*LAFLRQ
Trigger: CTGCCGCAGGAACGCTAGGCAGTCTCTTTCCACCAG...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGGCGATGGTATTCTTCTaGCTGCTCTCAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWAMVFF*LLSKGC
Trigger: GCAGCCCTTTGAGAGCAGCCAGAAGAATACCATCGC...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCGATGGTATTCTTCTaGCTGCTCTCAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEAMVFF*LLSKGC
Trigger: GCAGCCCTTTGAGAGCAGCCAGAAGAATACCATCGC...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTGCCGAGGTCCCAGTaGCTGCTGTTGTTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYLPRSQ*LLLLEE
Trigger: CTCTTCCAACAACAGCAGCCACTGGGACCTCGGCAG...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTGGTCTTTGGTGTCCGTaGGTATCATTCCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGGLWCP*VSFRSP
Trigger: TGGAGAACGGAATGATACCCACGGACACCAAAGACC...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGGTGCACGGACACTCTTaGTGTGTCCTGCGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWVHGHS*CVLRLL
Trigger: TAGCAAACGCAGGACACACCAAGAGTGTCCGTGCAC...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCAGAACAGCAAGCCACTaGCATCATGCAAGGCAATTG +
Preference number: 4 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPRTASH*HHARQL
Trigger: CAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCT...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCTGGTTGAGGATGTCGTaGGTACAACTTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSWLRMS*VQLSLE
Trigger: CTCCAGGGAAAGTTGTACCCACGACATCCTCAACCA...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCCTTCCATGGTACCAGTaGTTGAGGATGTCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSLPWYQ*LRMSWV
Trigger: TACCCACGACATCCTCAACCACTGGTACCATGGAAG...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTCTTGTGCCCTCTTGGTaGTGGAGATTCCACCATATC +
Preference number: 4 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSLVPSW*WRFHHI
Trigger: GATATGGTGGAATCTCCACCACCAAGAGGGCACAAG...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAGATAAATATCACTGTTaGGTTAGGACTGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLDKYHC*VRTGYG
Trigger: TCCATACCCAGTCCTAACCCAACAGTGATATTTATC...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCAGGCATGATCCGAATTTaGACACCAGTCTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDAGMIRI*TPVSQV
Trigger: TACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCTCTCACCAAATCCAGTaGGTAAAAACCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSSHQIQ*VKTSPT
Trigger: GGTGGGGCTGGTTTTTACCCACTGGATTTGGTGAGA...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTAACCCTGGTACACACTaGATGCTTCATATTCTCACC +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGNPGTH*MLHILT
Trigger: GGTGAGAATATGAAGCATCCAGTGTGTACCAGGGTT...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCCAACAAGCAGAGATGTaGAATGCAACACTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPQQAEM*NATLAG
Trigger: ACCAGCCAGTGTTGCATTCCACATCTCTGCTTGTTG...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTAAACACCTCCACACATaGATTTATCATCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPKHLHT*IYHHCH
Trigger: GTGACAATGATGATAAATCCATGTGTGGAGGTGTTT...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp AGGAAAATGCATGATTGGCCTTTAACCACGCAGCAGTaGATGTCATGTTTTCACCACTGCTCGCCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RKMHDWPLTTQQ*MSCFHHCSPVH
Trigger: ATGAACTGGCGAGCAGTGGTGAAAACATGACATCAACTGCTGCGTGGTTAAAGGCCAATCATGCATTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp GGCTGTGCTGATGCATGTATAGAATGTGTAGCAGCTTaGACCTATCACGTGTATTCTACATGCCATTTGGCC +
Preference number: 4 (lower is better)
Translates to: GCADACIECVAA*TYHVYSTCHLA
Trigger: GGCCAAATGGCATGTAGAATACACGTGATAGGTCAAAGCTGCTACACATTCTATACATGCATCAGCACAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp ATGAGAGAACTGAGGTTTACATGGAGTATGGATGGGTaGGTGAAGTCCAATGAAGGTATGGTGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: MRELRFTWSMDG*VKSNEGMVQRQ
Trigger: CTGTCTCTGCACCATACCTTCATTGGACTTCACCAACCCATCCATACTCCATGTAAACCTCAGTTCTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGTTTCCTATTGGACTaGCTCCCGCATTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSSFLLD*LPHCQH
Trigger: ATGCTGACAATGCGGGAGTCAGTCCAATAGGAAACT...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCAGTTTCCTATTGGACTaGCTCCCGCATTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLLSPLHPLRKMHDWPLTSFLLD*LPHCQH
Trigger: ATGCTGACAATGCGGGAGTCAGTCCAATAGGAAACT...GGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCCATAGTAAAACTCAACATCCACACCTGCATAAACATCGCCTCCCAAGTGACTAGCAAGGAGCAGTGGTaGCTTTTTCAGAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: PIVKLNIHTCINIASQVTSKEQW*LFQNKG
Trigger: TCCTTTATTCTGAAAAAGTCACCACTGCTCCTTGCT...AGTCACTTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAGTTTTACTATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCTCATCATGCAACCTATaGCTAGCCATTCCCCGACTT +
Preference number: 4 (lower is better)
Translates to: SLLSPLHPLRKMHDWPLTSSCNL*LAIPRL
Trigger: AAGTCGGGGAATGGCTAGTCATAGGTTGCATGATGA...GGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGGTGACTATTTATTACTaGGTCGACACAGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRVTIYY*VDTGCH
Trigger: GTGACATCCTGTGTCGACTCAGTAATAAATAGTCAC...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCCATACTGAGGACAGCTaGAAAGTAGGCAAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFHTEDS*KVGKAN
Trigger: GTTGGCCTTGCCTACTTTGCAGCTGTCCTCAGTATG...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCAACCTTTTCGTACGTGTaGTCTGATCTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDATFSYV*SDLLPT
Trigger: TGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGT...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGTGAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATCACTTTCTTGCTGTGTaGCATTGGATAAATAACATA +
Preference number: 4 (lower is better)
Translates to: SEPRTPITSNCLVLPGPNHFLAV*HWINNI
Trigger: TATGTTATTTATCCAATGGCACACAGCAAGAAAGTG...ATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCTACACAAAGACCTTGTaGCCTCTTGGTGGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSYTKTL*PLGGGD
Trigger: ATCTCCACCACCAAGAGGGCACAAGGTCTTTGTGTA...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATGAAAAATTCAGTGCCTaGTTGCCAGTGAAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINEKFSA*LPVKQK
Trigger: CTTTTGCTTCACTGGCAAGCAGGCACTGAATTTTTC...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTGGAAGAGTTTCCTATTaGACTGACTCCCGCATTGTC +
Preference number: 4 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSGRVSY*TDSRIV
Trigger: GACAATGCGGGAGTCAGTCCAATAGGAAACTCTTCC...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTAAGATGGTTCCAAGTTaGTCTCCAATTCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGKMVPS*SPIPAN
Trigger: ATTGGCTGGAATTGGAGACCAACTTGGAACCATCTT...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGAGTACAGTCCGTCAGCATaGCTGTGCTGGAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RKTRYDALNGWYQNSSSEYSPSA*LCWSCL
Trigger: CAGACAACTCCAGCACAGCCATGCTGACGGACTGTA...CTCTGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAGAACAGCAAGCCACTaGCATCATGCAAGGCAATTG +
Preference number: 4 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSRTASH*HHARQL
Trigger: CAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCT...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATACAGGCTATGACTGCTaGAACACAAATAGTCCTAGT +
Preference number: 4 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYTGYDC*NTNSPS
Trigger: ACTAGGACTATTTGTGTTCCAGCAGTCATAGCCTGT...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTGTGGTTCAGAAACCCTaGTACACACTGGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSVVQKP*YTLDAS
Trigger: TGAAGCATCCAGTGTGTACCAGGGTTTCTGAACCAC...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTCAACAAGCAGAGATGTaGAATGCAACACTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSQQAEM*NATLAG
Trigger: ACCAGCCAGTGTTGCATTCCACATCTCTGCTTGTTG...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp AATTCCAGGTGCTCTCAGGTCCCCACAGACATTCATTaGGAGCATAGAAAGACTAGGTATGATGCACTGAAT +
Preference number: 4 (lower is better)
Translates to: NSRCSQVPTDIH*EHRKTRYDALN
Trigger: ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCTGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp ACTGTAGTGAAGTTGAAAGCAGACTTTGGTCAGACTTaGAATACCAGCTCTACCACTTTCTTGCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: TVVKLKADFGQT*NTSSTTFLLCA
Trigger: GGCACACAGCAAGAAAGTGGTAGAGCTGGTATTCAAAGTCTGACCAAAGTCTGCTTTCAACTTCACTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCACCACCGTGGTCAGAGTaGCCACCACAAAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSPPWSE*PPQSKW
Trigger: CCATTTACTTTGTGGTGGTCACTCTGACCACGGTGG...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATTCTCCGCTAGTGCTGTaGTCTTTTGGTAAATCCACA +
Preference number: 4 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNSPLVL*SFGKST
Trigger: TGTGGATTTACCAAAAGATCACAGCACTAGCGGAGA...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATTGCAGCTTAGTGCTTTaGACTATTTTATTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYCSLVL*TILFLL
Trigger: CAGCAGGAATAAAATAGTTCAAAGCACTAAGCTGCA...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCACCAGAGGCTGGCATGTaGGGTGGTTTGCATATCACT +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSPEAGM*GGLHIT
Trigger: AGTGATATGCAAACCACCTCACATGCCAGCCTCTGG...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAATTGGCCTTCCACTCTaGCGCATGGGCCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSIGLPL*RMGLDF
Trigger: GAAATCAAGGCCCATGCGGCAGAGTGGAAGGCCAAT...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGGTCCCCTTCTGTGTGTaGACATATTACTACGACTCC +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWVPFCV*TYYYDS
Trigger: GGAGTCGTAGTAATATGTGCACACACAGAAGGGGAC...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTAACGTGTGCTCTGATCTaGTTCCAACAAATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLTCALI*FQQIPG
Trigger: ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGT...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTACCTTTTCGTACGTGTaGTCTGATCTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSTFSYV*SDLLPT
Trigger: TGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGT...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTCATGTTTTCACCACTaGTCGCCAGTTCATGTGGAC +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWSCFHH*SPVHVD
Trigger: GTCCACATGAACTGGCGAGCAGTGGTGAAAACATGA...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCGGGTCTCATAAGCAATaGCAGAACTTCAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFGSHKQ*QNFNRA
Trigger: GGCTCTGTTGAAGTTCTGGCATTGCTTATGAGACCC...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATATCACAGGCTATGACTaGTGGAACACAAATAGTCCT +
Preference number: 4 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNITGYD*WNTNSP
Trigger: AGGACTATTTGTGTTCCAGCAGTCATAGCCTGTGAT...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTCTGGTACACACTGGATaGTTCATATTCTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGLVHTG*FIFSPN
Trigger: ATTTGGTGAGAATATGAAGCATCCAGTGTGTACCAG...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCCACAACCACAAAGATaGCAACCACCGTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYPQPQR*QPPSST
Trigger: AGTGGAAGACGGTGGTTGCCATCTTTGTGGTTGTGG...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACGCATCAAGAGCATGCTaGATCAACGTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYASRAC*INVSSS
Trigger: GGAGCTGGAGACGTTGATCCAGCATGCTCTTGATGC...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCAGTGGCTGCTGTTGTTaGAAGAGTTTCCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSSGCCC*KSFLLD
Trigger: GTCCAATAGGAAACTCTTCCAACAACAGCAGCCACT...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATTGCTTTTCCCAAAGATaGTTCCAAGTTGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNCFSQR*FQVGLQ
Trigger: TTGGAGACCAACTTGGAACCATCTTTGGGAAAAGCA...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCTGCTTTTCCCAAAGATaGTTCCAAGTTGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPCFSQR*FQVGLQ
Trigger: TTGGAGACCAACTTGGAACCATCTTTGGGAAAAGCA...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGCCACAGACATTCATTTaGAGCATAGAAAGACTAGGT +
Preference number: 4 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRPQTFI*SIERLG
Trigger: ACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGG...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAAAGATCGGCGAGGGGTaGATGAAAGGATGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSKIGEG*MKGWRG
Trigger: TCCTCTCCATCCTTTCATCCACCCCTCGCCGATCTT...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp GATTTTTCACCTAAGAATCAAGAACACAAAGTAGATACCAAATCTCAGGCACCTAACAATTTCCGAGGATaGGGGAGCCTTGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: DFSPKNQEHKVDTKSQAPNNFRG*GSLGLA
Trigger: AGCCAGTCCAAGGCTCCCCCATCCTCGGAAATTGTT...AGGTGCCTGAGATTTGGTATCTACTTTGTGTTCTTGATTCTTAGGTGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCCTCCTAGGTTTATGCTaGAATGGGAGTGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFLLGLC*NGSADW
Trigger: CCAATCTGCACTCCCATTCCAGCATAAACCTAGGAG...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GATTTTTCACCTAAGAATCAAGAACACAAAGTAGATACCAAATCTCAGGCACCTCCTACGCCTTTCCCGTaGTTCAGAAACCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: DFSPKNQEHKVDTKSQAPPTPFP*FRNPGT
Trigger: TGTACCAGGGTTTCTGAACCACGGGAAAGGCGTAGG...AGGTGCCTGAGATTTGGTATCTACTTTGTGTTCTTGATTCTTAGGTGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGAAAACAAAACATCGTaGCGCAAAGTCTCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEENKTS*RKVSLH
Trigger: GTGCAGGGAGACTTTGCGCCACGATGTTTTGTTTTC...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340700.9
3UTR CAA 72 bp ATCACAAGGATGCATGACACAGACACTGTAGTGAAGTaGAAAGCAGACTTTGGTCAGACTTTGAATACCAGC +
Preference number: 4 (lower is better)
Translates to: ITRMHDTDTVVK*KADFGQTLNTS
Trigger: GCTGGTATTCAAAGTCTGACCAAAGTCTGCTTTCAACTTCACTACAGTGTCTGTGTCATGCATCCTTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGATGAACAGGATGGTTaGGATGACCCGGATCTTGGT +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSDEQDG*DDPDLG
Trigger: ACCAAGATCCGGGTCATCTCAACCATCCTGTTCATC...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AAAACACACACACACACACACACAACGCTCAGTCCAAGACCAATGTCCTTCACACTAGGTATGATGCACTaGATGGTTGGTATCAAAATT +
Preference number: 4 (lower is better)
Translates to: KTHTHTHTTLSPRPMSFTLGMMH*MVGIKI
Trigger: AATTTTGATACCAACCATTCAGTGCATCATACCTAG...TGTGAAGGACATTGGTCTTGGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTTGTCATTGGTTAAGGTaGTATCCACAGTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSCHWLR*YPQCDV
Trigger: CACATCACACTGTGGATATCACCTTAACCAATGACA...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGACTACCTACCCCTGTaGGAAAGACCAAACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RSMDSLIRKLRLVRITEEDYLPL*ERPNSA
Trigger: TGCTGAGTTTGGTCTTTCTCACAGGGGTAGGTAGTC...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCAGCAAGGAGCAGTGGTaGCTTTTTCAGAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLLSPLHPLRKMHDWPLTSKEQW*LFQNKG
Trigger: TCCTTTATTCTGAAAAAGTCACCACTGCTCCTTGCT...GGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATAATTATGATAAAGACTaGGGCATACACAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINNYDKD*GIHRSM
Trigger: CATACTCCTGTGTATGCCTCAGTCTTTATCATAATT...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAAGAGCTGTGCATTTTTaGGAAATGGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSRAVHF*EMGRDR
Trigger: CCTGTCCCTGCCCATTTCTCAAAAATGCACAGCTCT...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CCCATAGTAAAACTCAACATCCACACCTGCATAAACATCGCCTCCCAAGTGACTTGCTCTTTCTTTGTGTaGAATCGAAACATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PIVKLNIHTCINIASQVTCSFFV*NRNISP
Trigger: AGGAGAAATGTTTCGATTTCACACAAAGAAAGAGCA...AGTCACTTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAGTTTTACTATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATAGCAGCACAGCTTATTaGAATGTCACAAGCAAATTT +
Preference number: 4 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINSSTAY*NVTSKF
Trigger: AAATTTGCTTGTGACATTTCAATAAGCTGTGCTGCT...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCAAATACAAAAGATTTTaGCTCCTTCAGTGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPKYKRF*LLQCSE
Trigger: CTCCGAGCACTGAAGGAGGCAAAATCTTTTGTATTT...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTATCTCCACTCTTGCAATaGTTTTCCCAAAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLSPLLQ*FSQRWF
Trigger: GAACCATCTTTGGGAAAAGCATTGCAAGAGTGGAGA...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGAAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTACGTGTGCTCTGATCTaGTTCCAACAAATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RKAIAPFRTCALICFQQITCALI*FQQIPG
Trigger: ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGT...AATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCCATGAGAAAAGCAATTaGACCTTTTCGTACGTGTGC +
Preference number: 4 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSHEKSN*TFSYVC
Trigger: GCACACGTACGAAAAGGTGCAATTGCTTTTCTCATG...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCATGAGAAAAGCAATTaGACCTTTTCGTACGTGTGC +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGHEKSN*TFSYVC
Trigger: GCACACGTACGAAAAGGTGCAATTGCTTTTCTCATG...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCATTTCATTGCTTCGTTaGCCAGAAGGGGAAGAAATG +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGISLLR*PEGEEM
Trigger: CATTTCTTCCCCTTCTGGGCAACGAAGCAATGAAAT...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR GCA 90 bp AGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCAAGCCACTGGCATCATaGAAGGCAATTGTTTTGGTA +
Preference number: 4 (lower is better)
Translates to: SLLSPLHPLRKMHDWPLTKPLAS*KAIVLV
Trigger: TACCAAAACAATTGCCTTGCATGATGCCAGTGGCTT...GGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCTCAACATCCACACCTaGATAAACATCGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYLNIHT*INIASQ
Trigger: TTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAG...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCACGTGTATTCTACATaGCATTTGGCCCCATCTAAA +
Preference number: 4 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGHVYST*HLAPSK
Trigger: TTTAGATGGGGCCAAATGGCATGTAGAATACACGTG...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTCACTCTATACAGCCCTaGCCCAAAGTGATAAATATC +
Preference number: 4 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSHSIQP*PKVINI
Trigger: GATATTTATCACTTTGGGGCAGGGCTGTATAGAGTG...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGATCTTCTTTGATTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGAACATCCAAGAAAGATaGCGCTCCAAGCGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RIFFDFVHHILGQMSQGMNIQER*RSKRFC
Trigger: ACAGAACCGCTTGGAGCGGCATCTTTCTTGGATGTT...CATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CCA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTaGTATCAAAATTCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYDALNG*YQNSSS
Trigger: TGAGCTTGAATTTTGATACCAACCATTCAGTGCATC...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCCCACAGACATTCATTTaGAGCATAGAAAGACTAGGT +
Preference number: 4 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPPQTFI*SIERLG
Trigger: ACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGG...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGGGAAAATATTAGCTTaGGGGAGAACTGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RSMDSLIRKLRLVRITEEGKILA*GRTGEG
Trigger: GCCCTCTCCAGTTCTCCCCCAAGCTAATATTTTCCC...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTCACATTTTGTCAGGCTaGAATGATTCCCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: AIAPFRTCALICFQQIPGHILSG*NDSHSK
Trigger: TTTACTATGGGAATCATTCCAGCCTGACAAAATGTG...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATACTGCACAACTACAATaGCCCTTGACAAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNTAQLQ*PLTSIC
Trigger: ACAGATACTTGTCAAGGGCCATTGTAGTTGTGCAGT...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCTCTCCCAAGTACATCTaGTCTCCATTAATCCCCCAA +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFSPKYI*SPLIPQ
Trigger: TTGGGGGATTAATGGAGACCAGATGTACTTGGGAGA...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGAAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTAACCCTGGTACACACTaGATGCTTCATATTCTCACC +
Preference number: 4 (lower is better)
Translates to: RKAIAPFRTCALICFQQINPGTH*MLHILT
Trigger: GGTGAGAATATGAAGCATCCAGTGTGTACCAGGGTT...AATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCGAACTGAGGTTTACATaGAGTATGGATGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFELRFT*SMDGLV
Trigger: CACCAACCCATCCATACTCCATGTAAACCTCAGTTC...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCCATAGTAAAACTCAACATCCACACCTGCATAAACATCGCCTCCCAAGTGACTAAACACCTCCACACATaGATTTATCATCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: PIVKLNIHTCINIASQVTKHLHT*IYHHCH
Trigger: GTGACAATGATGATAAATCCATGTGTGGAGGTGTTT...AGTCACTTGGGAGGCGATGTTTATGCAGGTGTGGATGTTGAGTTTTACTATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGCCTGCGTTTGCTATCTaGAATGAAGTTCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWPAFAI*NEVLVL
Trigger: GAGAACAAGAACTTCATTTCAGATAGCAAACGCAGG...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGTACAGCACTGCCACTaGAATGCCCTTAACATGTAC +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSVQHCH*NALNMY
Trigger: GTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTAC...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp AAATGCTTTCACGTGTGGCCCAAAGAGCTAGCTGTGAACCAGCCAATTATGATACTAGGTATGATGCACTaGATGGTTGGTATCAAAATT +
Preference number: 4 (lower is better)
Translates to: KCFHVWPKELAVNQPIMILGMMH*MVGIKI
Trigger: AATTTTGATACCAACCATTCAGTGCATCATACCTAG...TATCATAATTGGCTGGTTCACAGCTAGCTCTTTGGGCCACACGTGAAAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGGTGACTATTTATTACTaGGTCGACACAGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWVTIYY*VDTGCH
Trigger: GTGACATCCTGTGTCGACTCAGTAATAAATAGTCAC...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACGCCCAAGGTTATGTTTaGTCCCTCTGTGTGACTGAT +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYAQGYV*SLCVTD
Trigger: ATCAGTCACACAGAGGGATCAAACATAACCTTGGGC...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCTCTCCACTCTTGCAATaGTTTTCCCAAAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFSPLLQ*FSQRWF
Trigger: GAACCATCTTTGGGAAAAGCATTGCAAGAGTGGAGA...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCGACCTTCTCCACTCTTaGAATGCTTTTCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFDLLHS*NAFPKD
Trigger: ATCTTTGGGAAAAGCATTGCAAGAGTGGAGAAGGTC...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGAAGTGTGTCTCAGAAATaGAGGATGTCTACTTTTGTA +
Preference number: 4 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRSVSQK*RMSTFV
Trigger: TACAAAAGTAGACATCCTGCATTTCTGAGACACACT...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTCCTCCAGATTTGTCATaGAAGAAAAATTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSPPDLS*KKNSVP
Trigger: AGGCACTGAATTTTTCTTGCATGACAAATCTGGAGG...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGGATCTTCTTTGATTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGCTTGACAAGTATCTGTaGTCAACTCCCTCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RIFFDFVHHILGQMSQGMLDKYL*STPSLD
Trigger: ATCAAGGGAGGGAGTTGAGCACAGATACTTGTCAAG...CATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGAGATGCACTGAATGGTTaGTATCAAAATTCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRDALNG*YQNSSS
Trigger: TGAGCTTGAATTTTGATACCAACCATTCAGTGCATC...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCACAAAAAGCCCTGAGATaGAAAGATGCCATGGTCCTC +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSQKALR*KDAMVL
Trigger: GAGGACCATGGCATCTTTCCATCTCAGGGCTTTTTG...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATTTTGGCCGTAGGGCCTaGAATTTTAACACACTGCTA +
Preference number: 4 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYFGRRA*NFNTLL
Trigger: TAGCAGTGTGTTAAAATTCCAGGCCCTACGGCCAAA...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGTTTATTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCTGTTCATCACATTCTTaGCCAAATGTCTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: SLLSPLHPLRKMHDWPLTCSSHS*PNVSGN
Trigger: ATTCCCTGAGACATTTGGCCAAGAATGTGATGAACA...GGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATTCTCCCAAGTACATCTaGTCTCCATTAATCCCCCAA +
Preference number: 4 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYSPKYI*SPLIPQ
Trigger: TTGGGGGATTAATGGAGACCAGATGTACTTGGGAGA...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGGATCTTCTTTGATTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGTGTGGAATGCAACACTaGCTGGTTTTTCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: RIFFDFVHHILGQMSQGMCGMQH*LVFPFS
Trigger: CGAGAAAGGAAAAACCAGCCAGTGTTGCATTCCACA...CATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCCTGCGTTTGCTATCTaGAATGAAGTTCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYPAFAI*NEVLVL
Trigger: GAGAACAAGAACTTCATTTCAGATAGCAAACGCAGG...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCATTCGTACGTGTGCTCTaGTCTGCTTCCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSFVRVL*SASNKF
Trigger: GAATTTGTTGGAAGCAGATCAGAGCACACGTACGAA...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGCTCTTTCTTTGTGTaGAATCGAAACATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGCSFFV*NRNISP
Trigger: AGGAGAAATGTTTCGATTTCACACAAAGAAAGAGCA...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACACCTTTTCGTACGTGTaGTCTGATCTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYTFSYV*SDLLPT
Trigger: TGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGT...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTTCTTTTTAAGGCCATTACTAGCCAGCTCTTACTGTTCACTCAGCCACTGTCTAGTGTGTCTCAGAAATaGAGGATGTCTACTTTTGTA +
Preference number: 4 (lower is better)
Translates to: FLFKAITSQLLLFTQPLSSVSQK*RMSTFV
Trigger: TACAAAAGTAGACATCCTGCATTTCTGAGACACACT...AGACAGTGGCTGAGTGAACAGTAAGAGCTGGCTAGTAATGGCCTTAAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp AGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGAGTTTCTCCTAGGTTTATaGTGGAATGGGAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RKTRYDALNGWYQNSSSEFLLGL*WNGSAD
Trigger: ATCTGCACTCCCATTCCAGCATAAACCTAGGAGAAA...CTCTGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGCCTCCAGATTTGTCATaGAAGAAAAATTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEPPDLS*KKNSVP
Trigger: AGGCACTGAATTTTTCTTGCATGACAAATCTGGAGG...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp GACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATAAGATGGTTCCAAGTTaGTCTCCAATTCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: DIHLEHRKTRYDALNGWYKMVPS*SPIPAN
Trigger: ATTGGCTGGAATTGGAGACCAACTTGGAACCATCTT...ATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTAGATGCACTGAATGGTTaGTATCAAAATTCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLDALNG*YQNSSS
Trigger: TGAGCTTGAATTTTGATACCAACCATTCAGTGCATC...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGTTCACCTGTTTTCTTaGCGTCTCGATTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEVHLFS*RLDWKF
Trigger: AAATTTCCAATCGAGACGCCAAGAAAACAGGTGAAC...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGGATAAATATCACTGTTaGGTTAGGACTGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWDKYHC*VRTGYG
Trigger: TCCATACCCAGTCCTAACCCAACAGTGATATTTATC...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp GTACATGGACATTTCCAAATCAGTTTATTGTCACCATaGCACCCACTGAGGAAAATGCATGATTGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: VHGHFQISLLSP*HPLRKMHDWPL
Trigger: TAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACTGATTTGGAAATGTCCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp CAGACCAATCATAATTATGATGTGTTAGCTTATCGTTaGCCTGGGAACAATCAGTCTAGGGTGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: QTNHNYDVLAYR*PGNNQSRVFQF
Trigger: AAACTGGAACACCCTAGACTGATTGTTCCCAGGCAAACGATAAGCTAACACATCATAATTATGATTGGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGAATTATGATAAAGACTaGGGCATACACAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWNYDKD*GIHRSM
Trigger: CATACTCCTGTGTATGCCTCAGTCTTTATCATAATT...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCATCTCCACTCTTGCAATaGTTTTCCCAAAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSSPLLQ*FSQRWF
Trigger: GAACCATCTTTGGGAAAAGCATTGCAAGAGTGGAGA...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGGGAATTTTAACACACTaGTACAAAGAACGTACCAGA +
Preference number: 4 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWGILTH*YKERTR
Trigger: TCTGGTACGTTCTTTGTAGCAGTGTGTTAAAATTCC...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCACGTGTATTCTACATaGCATTTGGCCCCATCTAAA +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYHVYST*HLAPSK
Trigger: TTTAGATGGGGCCAAATGGCATGTAGAATACACGTG...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAATGCTTTTCCCAAAGATaGTTCCAAGTTGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RSMDSLIRKLRLVRITEECFSQR*FQVGLQ
Trigger: TTGGAGACCAACTTGGAACCATCTTTGGGAAAAGCA...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGGATCTTCTTTGATTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGGTTGAAAGCAGACTTTaGTCAGACTTTGAATACCAG +
Preference number: 4 (lower is better)
Translates to: RIFFDFVHHILGQMSQGMVESRL*SDFEYQ
Trigger: CTGGTATTCAAAGTCTGACCAAAGTCTGCTTTCAAC...CATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
3UTR CAA 72 bp AACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTaGGTATTTCTACCCCTCTTATCAAAACAAGTTATA +
Preference number: 4 (lower is better)
Translates to: NSKPLASCKAIV*VFLPLLSKQVI
Trigger: TATAACTTGTTTTGATAAGAGGGGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR GCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACTCCAAAGTTTCCCTATaGAGAATTAACAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYSKVSL*RINSIH
Trigger: GTGGATGCTGTTAATTCTGCATAGGGAAACTTTGGA...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCACCACAGACATTCATTTaGAGCATAGAAAGACTAGGT +
Preference number: 4 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSPQTFI*SIERLG
Trigger: ACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGG...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAATCTTGGCGTCTCGATTaGAAATTTCATTGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: RSMDSLIRKLRLVRITEESWRLD*KFHCFV
Trigger: AACGAAGCAATGAAATTTCCAATCGAGACGCCAAGA...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319231.10
3UTR CAA 72 bp ATAACCAAAGTACATGGACATTTCCAAATCAGTTTATaGTCACCATTGCACCCACTGAGGAAAATGCATGAT +
Preference number: 4 (lower is better)
Translates to: ITKVHGHFQISL*SPLHPLRKMHD
Trigger: ATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAATAAACTGATTTGGAAATGTCCATGTACTTTGGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR TCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACAGCAGCACAGCTTATTaGAATGTCACAAGCAAATTT +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYSSTAY*NVTSKF
Trigger: AAATTTGCTTGTGACATTTCAATAAGCTGTGCTGCT...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CCA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCACATTTTGTCAGGCTaGAATGATTCCCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYHILSG*NDSHSK
Trigger: TTTACTATGGGAATCATTCCAGCCTGACAAAATGTG...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp GCTGCTGCGGGAACGGCCATGGCTCGGCCGGCCGGCGGGCGGGCGTaGAGGCGGCAGCGGCGCGCTTGCTGGAGTTGCAGCCGGAGACAC +
Preference number: 5 (lower is better)
Translates to: AAAGTAMARPAGGRA*RRQRRACWSCSRRH
Trigger: GTGTCTCCGGCTGCAACTCCAGCAAGCGCGCCGCTGCCGCCTCCACGCCCGCCCGCCGGCCGGCCGAGCCATGGCCGTTCCCGCAGCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556282.1
CDS GCA 90 bp GTGAGTGGGCCCGCTGGTCCAGGCCCAGCCGCCGGCGCTCCATGCTaGGGATGGTGGCCGCCCGCTGCAGCTTATCGTGGATCTCCACGC +
Preference number: 5 (lower is better)
Translates to: VSGPAGPGPAAGAPC*GWWPPAAAYRGSPR
Trigger: GCGTGGAGATCCACGATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGCGGCTGGGCCTGGACCAGCGGGCCCACTCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp CCAGTGAGTGGGCCCGCTGGTCCAGGCCCAGCCGCCGGCGCTCCATaGTGCGGATGGTGGCCGCCCGCTGCAGCTTATCGTGGATCTCCA +
Preference number: 5 (lower is better)
Translates to: PVSGPAGPGPAAGAP*CGWWPPAAAYRGSP
Trigger: TGGAGATCCACGATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGCGGCTGGGCCTGGACCAGCGGGCCCACTCACTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp ACAGAGCGCTTCTCGGGGGACAGCATGTCCAGTGAGTGGGCCCGCTaGTCCAGGCCCAGCCGCCGGCGCTCCATGCTGCGGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: TERFSGDSMSSEWAR*SRPSRRRSMLRMVA
Trigger: GGCCACCATCCGCAGCATGGAGCGCCGGCGGCTGGGCCTGGACCAGCGGGCCCACTCACTGGACATGCTGTCCCCCGAGAAGCGCTCTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp GCAAAGTCTCCCTGCACTCGCCGGCCCCCAGCAGGAGACCCGGGCTaGCGGCCACTGCGTCCTGGGTGCACTCGGTGGCAAAGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: AKSPCTRRPPAGDPG*RPLRPGCTRWQSAA
Trigger: AGCAGCGCTTTGCCACCGAGTGCACCCAGGACGCAGTGGCCGCCAGCCCGGGTCTCCTGCTGGGGGCCGGCGAGTGCAGGGAGACTTTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS GCA 90 bp AGGCCCAGCCGCCGGCGCTCCATGCTGCGGATGGTGGCCGCCCGCTaGAGCTTATCGTGGATCTCCACGCTGAGCCTTCGCCGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RPSRRRSMLRMVAAR*SLSWISTLSLRRVS
Trigger: GGAGACACGGCGAAGGCTCAGCGTGGAGATCCACGATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGCGGCTGGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp GGGCTGGCGGCCACTGCGTCCTGGGTGCACTCGGTGGCAAAGCGCTaGTACCGGGCACGGGTCTCTGCAGCTCAAAACCTGCCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GLAATASWVHSVAKR*YRARVSAAQNLPGW
Trigger: CCAGCCGGGCAGGTTTTGAGCTGCAGAGACCCGTGCCCGGTAGCAGCGCTTTGCCACCGAGTGCACCCAGGACGCAGTGGCCGCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CCA 90 bp GCAGCAAAGACAGAGCGCTTCTCGGGGGACAGCATGTCCAGTGAGTaGGCCCGCTGGTCCAGGCCCAGCCGCCGGCGCTCCATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: AAKTERFSGDSMSSE*ARWSRPSRRRSMLR
Trigger: CCGCAGCATGGAGCGCCGGCGGCTGGGCCTGGACCAGCGGGCCCACTCACTGGACATGCTGTCCCCCGAGAAGCGCTCTGTCTTTGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp CGGCGCTCCATGCTGCGGATGGTGGCCGCCCGCTGCAGCTTATCGTaGATCTCCACGCTGAGCCTTCGCCGTGTCTCCCGGAACTCAGCC +
Preference number: 5 (lower is better)
Translates to: RRSMLRMVAARCSLS*ISTLSLRRVSRNSA
Trigger: GGCTGAGTTCCGGGAGACACGGCGAAGGCTCAGCGTGGAGATCCACGATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp CCTGGCTACCACTGTGGCTCGGGAGGAAATGGACAGGCGCGGAGTTaGAGTCGGAGCCGGAGCCGGGGGTTGCCCGTTAGTGGCGCTCTT +
Preference number: 5 (lower is better)
Translates to: PGYHCGSGGNGQARS*SRSRSRGLPVSGAL
Trigger: AAGAGCGCCACTAACGGGCAACCCCCGGCTCCGGCTCCGACTCCAACTCCGCGCCTGTCCATTTCCTCCCGAGCCACAGTGGTAGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS GCA 90 bp TACGGAGAAGCCCACTGCAGTGTCACTCCAGCCCCCGAAGGCGTGTaGGCACACACTCCCGCACACACACACCCGCACACACACTCCCGG +
Preference number: 5 (lower is better)
Translates to: YGEAHCSVTPAPEGV*AHTPAHTHPHTHSR
Trigger: CCGGGAGTGTGTGTGCGGGTGTGTGTGTGCGGGAGTGTGTGCGCACACGCCTTCGGGGGCTGGAGTGACACTGCAGTGGGCTTCTCCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS GCA 90 bp CTGGGTGCACTCGGTGGCAAAGCGCTGCTACCGGGCACGGGTCTCTaGAGCTCAAAACCTGCCCGGCTGGAGCGCACCAATAGTTGCCCC +
Preference number: 5 (lower is better)
Translates to: LGALGGKALLPGTGL*SSKPARLERTNSCP
Trigger: GGGGCAACTATTGGTGCGCTCCAGCCGGGCAGGTTTTGAGCTGCAGAGACCCGTGCCCGGTAGCAGCGCTTTGCCACCGAGTGCACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CCA 90 bp TCTGCAAGCCCCCTTGGGAGGTGCCTTCCATCCTGGCTACCACTGTaGCTCGGGAGGAAATGGACAGGCGCGGAGTTGGAGTCGGAGCCG +
Preference number: 5 (lower is better)
Translates to: SASPLGRCLPSWLPL*LGRKWTGAELESEP
Trigger: CGGCTCCGACTCCAACTCCGCGCCTGTCCATTTCCTCCCGAGCCACAGTGGTAGCCAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS CCA 90 bp GGCCCCTTCAGGCGCAGGTTGTTGGGCCGGTTGTTGATGCTCTCCTaGGATGAGGCCTTGAAGCGGCCGGTGTCCAGGGCAGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: GPFRRRLLGRLLMLS*DEALKRPVSRAAKT
Trigger: TGTCTTTGCTGCCCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGTCCTGGGATGAGGCCTaGAAGCGGCCGGTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LVYVCAQVALPRGTALPLSWDEA*KRPVSR
Trigger: CCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGGA...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTTCCTGGGATGAGGCCTaGAAGCGGCCGGTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SCPCLRVCPGSTAQGYSTSWDEA*KRPVSR
Trigger: CCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGGA...AGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp GACCCGAACTTGTTGATGATGTTGTCCTCGGACGCACCCTGCCCATaGTTGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: DPNLLMMLSSDAPCP*LFSCSGPFRRRLLG
Trigger: GCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp GAGGTGGACCCGAACTTGTTGATGATGTTGTCCTCGGACGCACCCTaGCCATGCTTGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: EVDPNLLMMLSSDAP*PCLFSCSGPFRRRL
Trigger: CAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGGGTCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCTCCGGCTCCCGGTCTTaGGTGTCCGTGGGTATCATT +
Preference number: 5 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTASGSRS*VSVGII
Trigger: AATGATACCCACGGACACCAAAGACCGGGAGCCGGA...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp TTGATGATGTTGTCCTCGGACGCACCCTGCCCATGCTTGTTCAGCTaGTCCGGCCCCTTCAGGCGCAGGTTGTTGGGCCGGTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: LMMLSSDAPCPCLFS*SGPFRRRLLGRLLM
Trigger: CATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp GGTCTCTGCAGCTCAAAACCTGCCCGGCTGGAGCGCACCAATAGTTaGCCCACCACTTTAATGAATGCCGTGTGGCCCGGCATGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GLCSSKPARLERTNS*PTTLMNAVWPGMGR
Trigger: CCTTCCCATGCCGGGCCACACGGCATTCATTAAAGTGGTGGGGCAACTATTGGTGCGCTCCAGCCGGGCAGGTTTTGAGCTGCAGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CCA 90 bp ATGGCAACCACCGTCTTCCACTTCATGACGGTCTGCAAGCCCCCTTaGGAGGTGCCTTCCATCCTGGCTACCACTGTGGCTCGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: MATTVFHFMTVCKPP*EVPSILATTVAREE
Trigger: TTCCTCCCGAGCCACAGTGGTAGCCAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGGTGGTTGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS GCA 90 bp CCCGCAGGAATTCCGCCTTCTCCAAGGCGATGGTATTCTTCTGGCTaGTCTCAAAGGGCTGCTCCAATGCCCGGAAGACAAGACCGCCAG +
Preference number: 5 (lower is better)
Translates to: PAGIPPSPRRWYSSG*SQRAAPMPGRQDRQ
Trigger: CTGGCGGTCTTGTCTTCCGGGCATTGGAGCAGCCCTTTGAGAGCAGCCAGAAGAATACCATCGCCTTGGAGAAGGCGGAATTCCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS-3UTR CAA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCAACTTGTTGATGATGTaGTCCTCGGACGCACCCTGC +
Preference number: 5 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTANLLMM*SSDAPC
Trigger: GCAGGGTGCGTCCGAGGACAACATCATCAACAAGTT...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTCCGTTAGTGGCGCTCTaGGGCTGGCACACCGGTGCT +
Preference number: 5 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPPLVAL*GWHTGA
Trigger: AGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGG...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGTTGTTGGGCCGGTTGTaGATGCTCTCCTGGGATGAG +
Preference number: 5 (lower is better)
Translates to: CTARTGYVHGHSWCVLRLLLGRL*MLSWDE
Trigger: CTCATCCCAGGAGAGCATCAACAACCGGCCCAACAA...CAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGACCCTTCAGGCGCAGGTaGTTGGGCCGGTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: TAQGYSTATEMPLTCTARPFRRR*LGRLLM
Trigger: CATCAACAACCGGCCCAACAACCTGCGCCTGAAGGG...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCAGAGGGCTTGGGTGTTaGCACCGGCCAGGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPRGLGC*HRPGGG
Trigger: GCCACCCCCTGGCCGGTGCAAACACCCAAGCCCTCT...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS TCA 90 bp AGACCACCACAACCACAAAGATGGCAACCACCGTCTTCCACTTCATaGCGGTCTGCAAGCCCCCTTGGGAGGTGCCTTCCATCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: RPPQPQRWQPPSSTS*RSASPLGRCLPSWL
Trigger: TAGCCAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGGTGGTTGCCATCTTTGTGGTTGTGGTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS TCA 90 bp GCATGCTGGATCAACGTCTCCAGCTCCTGGGGGCTCACACAGACATaGTCCCGCAGGAATTCCGCCTTCTCCAAGGCGATGGTATTCTTC +
Preference number: 5 (lower is better)
Translates to: ACWINVSSSWGLTQT*SRRNSAFSKAMVFF
Trigger: GAAGAATACCATCGCCTTGGAGAAGGCGGAATTCCTGCGGGATCATGTCTGTGTGAGCCCCCAGGAGCTGGAGACGTTGATCCAGCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS GCA 90 bp ACAACCACAAAGATGGCAACCACCGTCTTCCACTTCATGACGGTCTaGAAGCCCCCTTGGGAGGTGCCTTCCATCCTGGCTACCACTGTG +
Preference number: 5 (lower is better)
Translates to: TTTKMATTVFHFMTV*KPPWEVPSILATTV
Trigger: CACAGTGGTAGCCAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGGTGGTTGCCATCTTTGTGGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS-3UTR CAA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTACCGTTAGTGGCGCTCTaGGGCTGGCACACCGGTGCT +
Preference number: 5 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLPLVAL*GWHTGA
Trigger: AGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGG...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGCCCTTCAGGCGCAGGTaGTTGGGCCGGTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMPFRRR*LGRLLM
Trigger: CATCAACAACCGGCCCAACAACCTGCGCCTGAAGGG...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGGAGGTGGACCCGAACTaGTTGATGATGTTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: NMYGQNRLRARTLLVCPAEVDPN*LMMLSS
Trigger: CGAGGACAACATCATCAACAAGTTCGGGTCCACCTC...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGTTTACACAAAGACCTaGTGCCCTCTTGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATVYTKT*CPLGGG
Trigger: TCCACCACCAAGAGGGCACAAGGTCTTTGTGTAAAC...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGTGCAGGGGCAACCCTTaGAGCCATGTTTACACAAAG +
Preference number: 5 (lower is better)
Translates to: LVYVCAQVALPRGTALPLCRGNP*SHVYTK
Trigger: CTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCA...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTAGGGGCTCTGAATGTTaGTTTTCCTACGCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATRGSEC*FSYAFP
Trigger: GGGAAAGGCGTAGGAAAACAAACATTCAGAGCCCCT...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS TCA 90 bp TGCTCTCAAAGGGCTGCTCCAATGCCCGGAAGACAAGACCGCCAGTaGCAAGGTAGACCACCACAACCACAAAGATGGCAACCACCGTCT +
Preference number: 5 (lower is better)
Translates to: CSQRAAPMPGRQDRQ*QGRPPQPQRWQPPS
Trigger: AGACGGTGGTTGCCATCTTTGTGGTTGTGGTGGTCTACCTTGTCACTGGCGGTCTTGTCTTCCGGGCATTGGAGCAGCCCTTTGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS GCA 90 bp CGGTCTTTGGTGTCCGTGGGTATCATTCCGTTCTCCAACTCAGCGTaGTGCTGGATACAGTCCGTCAGCATGGCTGTGCTGGAGTTGTCT +
Preference number: 5 (lower is better)
Translates to: RSLVSVGIIPFSNSA*CWIQSVSMAVLELS
Trigger: AGACAACTCCAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGAGAACGGAATGATACCCACGGACACCAAAGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp AAGCGGTTCTGTCTCCCTCTGTGCCGCCGCAACTTCCATGGCTATTaGTTCAGGCGGGTTAAGTCTGGTGGAAAGAGACTGCCTAGCGTT +
Preference number: 5 (lower is better)
Translates to: KRFCLPLCRRNFHGY*FRRVKSGGKRLPSV
Trigger: AACGCTAGGCAGTCTCTTTCCACCAGACTTAACCCGCCTGAAGCAATAGCCATGGAAGTTGCGGCGGCACAGAGGGAGACAGAACCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CAA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGGGACTGACTCCCGCATaGTCAGCATCAAGAGCATGC +
Preference number: 5 (lower is better)
Translates to: NALNMYGQNRLRARTLLVGLTPA*SASRAC
Trigger: GCATGCTCTTGATGCTGACAATGCGGGAGTCAGTCC...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACTCCTGGGATGAGGCCTaGAAGCGGCCGGTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDSWDEA*KRPVSR
Trigger: CCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGGA...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGATTGTTGGGCCGGTTGTaGATGCTCTCCTGGGATGAG +
Preference number: 5 (lower is better)
Translates to: TAQGYSTATEMPLTCTARLLGRL*MLSWDE
Trigger: CTCATCCCAGGAGAGCATCAACAACCGGCCCAACAA...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGTTCAGGCGCAGGTTGTaGGGCCGGTTGTTGATGCTC +
Preference number: 5 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMFRRRL*GRLLML
Trigger: GAGCATCAACAACCGGCCCAACAACCTGCGCCTGAA...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGACCCTTCAGGCGCAGGTaGTTGGGCCGGTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRPFRRR*LGRLLM
Trigger: CATCAACAACCGGCCCAACAACCTGCGCCTGAAGGG...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAACGTGCACGGACACTCTaGGTGTGTCCTGCGTTTGCT +
Preference number: 5 (lower is better)
Translates to: EPATCTDTLGVSCVCYLKRARTL*VCPAFA
Trigger: AGCAAACGCAGGACACACCAAGAGTGTCCGTGCACG...TTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACAGAACTGGAGAGGGCTaGGGTGTTTGCACCGGCCAG +
Preference number: 5 (lower is better)
Translates to: NQLPPNQVPFCVCTYYYDRTGEG*GVCTGQ
Trigger: CTGGCCGGTGCAAACACCCAAGCCCTCTCCAGTTCT...GTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CAA 90 bp TGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCCAACTACAATGGCCCTaGACAAGTATCTGTGCTCAA +
Preference number: 5 (lower is better)
Translates to: CPCLRVCPGSTAQGYSTAQLQWP*TSICAQ
Trigger: TTGAGCACAGATACTTGTCAAGGGCCATTGTAGTTG...GGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGAGGGGCTCTGAATGTTaGTTTTCCTACGCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: NMYGQNRLRARTLLVCPARGSEC*FSYAFP
Trigger: GGGAAAGGCGTAGGAAAACAAACATTCAGAGCCCCT...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp TCGCCGTGTCTCCCGGAACTCAGCCGTGACATTGGCCTTCCACTCTaGCGCATGGGCCTTGATTTCACCCACCTCTTCTTTTGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SPCLPELSRDIGLPL*RMGLDFTHLFFCLF
Trigger: AAAAAGACAAAAGAAGAGGTGGGTGAAATCAAGGCCCATGCGGCAGAGTGGAAGGCCAATGTCACGGCTGAGTTCCGGGAGACACGGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp TCTTTGGTGTCCGTGGGTATCATTCCGTTCTCCAACTCAGCGTGCTaGTGGATACAGTCCGTCAGCATGGCTGTGCTGGAGTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SLVSVGIIPFSNSAC*WIQSVSMAVLELSE
Trigger: CTCAGACAACTCCAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGAGAACGGAATGATACCCACGGACACCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp AACATCCAAGAAAGATGCCGCTCCAAGCGGTTCTGTCTCCCTCTGTaGCGCCGCAACTTCCATGGCTATTGCTTCAGGCGGGTTAAGTCT +
Preference number: 5 (lower is better)
Translates to: NIQERCRSKRFCLPL*RRNFHGYCFRRVKS
Trigger: AGACTTAACCCGCCTGAAGCAATAGCCATGGAAGTTGCGGCGGCACAGAGGGAGACAGAACCGCTTGGAGCGGCATCTTTCTTGGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS-3UTR CAA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCCGGAGCCGGGGGTaGCCCGTTAGTGGCGCTCTT +
Preference number: 5 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNSRSRG*PVSGAL
Trigger: AAGAGCGCCACTAACGGGCAACCCCCGGCTCCGGCT...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTAGGTCTGCAAGCCCCCTaGGGAGGTGCCTTCCATCCT +
Preference number: 5 (lower is better)
Translates to: RHTCFFQEAGLRNSCPCLGLQAP*GGAFHP
Trigger: AGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACC...TAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCGTGCACGGACACTCTaGGTGTGTCCTGCGTTTGCT +
Preference number: 5 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTRARTL*VCPAFA
Trigger: AGCAAACGCAGGACACACCAAGAGTGTCCGTGCACG...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGGGGCATGATCCGAATTaGGACACCAGTCTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWGHDPN*DTSLPS
Trigger: ACTTGGGAGACTGGTGTCCAAATTCGGATCATGCCC...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGATGGATTTATCATCATaGTCACTGGGTCCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LVYVCAQVALPRGTALPLMDLSS*SLGPLS
Trigger: AGACAGGGGACCCAGTGACAATGATGATAAATCCAT...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp TTGGTGTCCGTGGGTATCATTCCGTTCTCCAACTCAGCGTGCTGCTaGATACAGTCCGTCAGCATGGCTGTGCTGGAGTTGTCTGAGTTA +
Preference number: 5 (lower is better)
Translates to: LVSVGIIPFSNSACC*IQSVSMAVLELSEL
Trigger: TAACTCAGACAACTCCAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGAGAACGGAATGATACCCACGGACACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACCGTTAGTGGCGCTCTaGGGCTGGCACACCGGTGCT +
Preference number: 5 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDAPLVAL*GWHTGA
Trigger: AGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGG...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATAGCCGGAGCCGGGGGTaGCCCGTTAGTGGCGCTCTT +
Preference number: 5 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNSRSRG*PVSGAL
Trigger: AAGAGCGCCACTAACGGGCAACCCCCGGCTCCGGCT...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AAAACACACACACACACACACACAACGCTCAGTCCAAGACCAATGTCCTTCACAGGTCTGCAAGCCCCCTaGGGAGGTGCCTTCCATCCT +
Preference number: 5 (lower is better)
Translates to: KTHTHTHTTLSPRPMSFTGLQAP*GGAFHP
Trigger: AGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACC...TGTGAAGGACATTGGTCTTGGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ATGGTACCAGTGGTTGAGGATGTCGTGGGTACAACTTTCCCTGGAGGTCAGAAATTCAGGCGCAGGTTGTaGGGCCGGTTGTTGATGCTC +
Preference number: 5 (lower is better)
Translates to: MVPVVEDVVGTTFPGGQKFRRRL*GRLLML
Trigger: GAGCATCAACAACCGGCCCAACAACCTGCGCCTGAA...TTTCTGACCTCCAGGGAAAGTTGTACCCACGACATCCTCAACCACTGGTACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTGCACCCTGCCCATGCTaGTTCAGCTGCTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGAPCPC*FSCSGP
Trigger: GGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGC...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTCCTTGTTTTTCCTCTaGGTGAGTCTGGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWSLFFL*VSLEVD
Trigger: GTCCACCTCCAGACTCACCAAGAGGAAAAACAAGGA...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTTTCTTGGCGTCTCGATaGGAAATTTCATTGCTTCGT +
Preference number: 5 (lower is better)
Translates to: SCPCLRVCPGSTAQGYSTFLASR*EISLLR
Trigger: ACGAAGCAATGAAATTTCCAATCGAGACGCCAAGAA...AGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CAA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGAGCAGGCTTCTGTCATaGGTTAAGGTGATATCCACA +
Preference number: 5 (lower is better)
Translates to: NMYGQNRLRARTLLVCPASRLLS*VKVIST
Trigger: TGTGGATATCACCTTAACCAATGACAGAAGCCTGCT...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGGTGTTAGCTTATCGTTaGCCTGGGAACAATCAGTCT +
Preference number: 5 (lower is better)
Translates to: NMYGQNRLRARTLLVCPAVLAYR*PGNNQS
Trigger: AGACTGATTGTTCCCAGGCAAACGATAAGCTAACAC...CGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGTGAGCCTAGAACACCCATAACCAGCAACTGCCTGGTGTTGCCAGGTCCAAATAAGCCTCTGCCAGATTaGGCCGTAGGGCCTGGAATT +
Preference number: 5 (lower is better)
Translates to: SEPRTPITSNCLVLPGPNKPLPD*AVGPGI
Trigger: AATTCCAGGCCCTACGGCCAAATCTGGCAGAGGCTT...ATTTGGACCTGGCAACACCAGGCAGTTGCTGGTTATGGGTGTTCTAGGCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGTTGTTCATCACATTCTaGGCCAAATGTCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: LVYVCAQVALPRGTALPLLFITF*AKCLRE
Trigger: TTCCCTGAGACATTTGGCCAAGAATGTGATGAACAA...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGGAATGTGTAGCAGCTTaGACCTATCACGTGTATTCT +
Preference number: 5 (lower is better)
Translates to: LVYVCAQVALPRGTALPLECVAA*TYHVYS
Trigger: AGAATACACGTGATAGGTCAAAGCTGCTACACATTC...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS TCA 90 bp CGAGGTCCCAGTGGCTGCTGTTGTTGGAAGAGTTTCCTATTGGACTaGCTCCCGCATTGTCAGCATCAAGAGCATGCTGGATCAACGTCT +
Preference number: 5 (lower is better)
Translates to: RGPSGCCCWKSFLLD*LPHCQHQEHAGSTS
Trigger: AGACGTTGATCCAGCATGCTCTTGATGCTGACAATGCGGGAGTCAGTCCAATAGGAAACTCTTCCAACAACAGCAGCCACTGGGACCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS GCA 90 bp TCTCCAACTCAGCGTGCTGCTGGATACAGTCCGTCAGCATGGCTGTaGTGGAGTTGTCTGAGTTACACATCTTTTCCGTCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: SPTQRAAGYSPSAWL*WSCLSYTSFPSPPL
Trigger: AAGAGGAGGAGACGGAAAAGATGTGTAACTCAGACAACTCCAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 90 bp TCCATGGCTATTGCTTCAGGCGGGTTAAGTCTGGTGGAAAGAGACTaGCTAGCGTTCCTGCGGCAGGAAAACAAAACATCGTGGCGCAAA +
Preference number: 5 (lower is better)
Translates to: SMAIASGGLSLVERD*LAFLRQENKTSWRK
Trigger: TTTGCGCCACGATGTTTTGTTTTCCTGCCGCAGGAACGCTAGGCAGTCTCTTTCCACCAGACTTAACCCGCCTGAAGCAATAGCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CCA 90 bp ACTGCCGAGGTCCCAGTGGCTGCTGTTGTTGGAAGAGTTTCCTATTaGACTGACTCCCGCATTGTCAGCATCAAGAGCATGCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: TAEVPVAAVVGRVSY*TDSRIVSIKSMLDQ
Trigger: TTGATCCAGCATGCTCTTGATGCTGACAATGCGGGAGTCAGTCCAATAGGAAACTCTTCCAACAACAGCAGCCACTGGGACCTCGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS CCA 90 bp TTCCGTTCTCCAACTCAGCGTGCTGCTGGATACAGTCCGTCAGCATaGCTGTGCTGGAGTTGTCTGAGTTACACATCTTTTCCGTCTCCT +
Preference number: 5 (lower is better)
Translates to: FRSPTQRAAGYSPSA*LCWSCLSYTSFPSP
Trigger: AGGAGACGGAAAAGATGTGTAACTCAGACAACTCCAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGAGAACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp CTTCAAGTAATGAGTTGTTCTCCGGCTCCCGGTCTTTGGTGTCCGTaGGTATCATTCCGTTCTCCAACTCAGCGTGCTGCTGGATACAGT +
Preference number: 5 (lower is better)
Translates to: LQVMSCSPAPGLWCP*VSFRSPTQRAAGYS
Trigger: ACTGTATCCAGCAGCACGCTGAGTTGGAGAACGGAATGATACCCACGGACACCAAAGACCGGGAGCCGGAGAACAACTCATTACTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp TGCTGCGGGAACGGCCACTTTAGGATCCCAGTTCACCTGTTTTCTTaGCGTCTCGATTGGAAATTTCATTGCTTCGTTGCCCAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: CCGNGHFRIPVHLFS*RLDWKFHCFVAQKG
Trigger: CCCCTTCTGGGCAACGAAGCAATGAAATTTCCAATCGAGACGCCAAGAAAACAGGTGAACTGGGATCCTAAAGTGGCCGTTCCCGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CAA 90 bp CCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTAAAATACAAAAGATTTaGCCTCCTTCAGTGCTCGGA +
Preference number: 5 (lower is better)
Translates to: PCLRVCPGSTAQGYSTATKIQKI*PPSVLG
Trigger: TCCGAGCACTGAAGGAGGCAAAATCTTTTGTATTTT...AGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCAGGTTGTTGGGCCGGTaGTTGATGCTCTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPRLLGR*LMLSWD
Trigger: ATCCCAGGAGAGCATCAACAACCGGCCCAACAACCT...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGGCACCCTGCCCATGCTaGTTCAGCTGCTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWAPCPC*FSCSGP
Trigger: GGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGC...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGATCGGGCAAGGTCTTTTaGAGGTCCTTGTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: TAQGYSTATEMPLTCTARSGKVF*RSLFFL
Trigger: GAGGAAAAACAAGGACCTCAAAAAGACCTTGCCCGA...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCGAGGATGGGGGAGCCTaGGACTGGCTCGTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: TEQQATGIMQGNCFGISTEDGGA*DWLVEE
Trigger: TTCCTCCACGAGCCAGTCCAAGGCTCCCCCATCCTC...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CAA 90 bp TGGGTAAAAACCAGCCCCACCCAAACTCTGGTCACCTTCTCACTAGTCCTCAGAAGCAACTGCCTGGTGTaGCCAGGTCCAAATGCTTTC +
Preference number: 5 (lower is better)
Translates to: WVKTSPTQTLVTFSLVLRSNCLV*PGPNAF
Trigger: GAAAGCATTTGGACCTGGCAACACCAGGCAGTTGCT...TCTGAGGACTAGTGAGAAGGTGACCAGAGTTTGGGTGGGGCTGGTTTTTACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAGCCTCTGCCAGATTaGGCCGTAGGGCCTGGAATT +
Preference number: 5 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLKPLPD*AVGPGI
Trigger: AATTCCAGGCCCTACGGCCAAATCTGGCAGAGGCTT...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp AGTTTCTGTCTTCAAGTAATGAGTTGTTCTCCGGCTCCCGGTCTTTaGTGTCCGTGGGTATCATTCCGTTCTCCAACTCAGCGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SFCLQVMSCSPAPGL*CPWVSFRSPTQRAA
Trigger: AGCAGCACGCTGAGTTGGAGAACGGAATGATACCCACGGACACCAAAGACCGGGAGCCGGAGAACAACTCATTACTTGAAGACAGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACTGCCCAGGGGTACAGCACTGCCACTGAAATGCCCTTAACATGTACGGCCAGAAGACCTTCTCCACTCTaGCAATGCTTTTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: TAQGYSTATEMPLTCTARRPSPL*QCFSQR
Trigger: TCTTTGGGAAAAGCATTGCAAGAGTGGAGAAGGTCT...TCTGGCCGTACATGTTAAGGGCATTTCAGTGGCAGTGCTGTACCCCTGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCGAGGTGGACCCGAACTaGTTGATGATGTTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPEVDPN*LMMLSS
Trigger: CGAGGACAACATCATCAACAAGTTCGGGTCCACCTC...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACCAGCTCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTTCTTCAAGTAATGAGTaGTTCTCCGGCTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: TSSHPIRSPSVCAHITTTSSSNE*FSGSRS
Trigger: AGACCGGGAGCCGGAGAACAACTCATTACTTGAAGA...AGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGCGTGCACGGACACTCTaGGTGTGTCCTGCGTTTGCT +
Preference number: 5 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRRARTL*VCPAFA
Trigger: AGCAAACGCAGGACACACCAAGAGTGTCCGTGCACG...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGGGGTACAGCACTGCCACTGGGGTACATTTTCTTTTaGTTTGGAGATAGCGAGATT +
Preference number: 5 (lower is better)
Translates to: LVYVCAQVALPRGTALPLGYIFF*FGDSEI
Trigger: AATCTCGCTATCTCCAAACAAAAAGAAAATGTACCC...CAGTGGCAGTGCTGTACCCCTGGGCAGTGCTACCTGGGCACACACGTAGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCGCTCAACTCCCTCCCTaGATGTGCAGACAAGGTAAC +
Preference number: 5 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPAQLPP*MCRQGN
Trigger: GTTACCTTGTCTGCACATCAAGGGAGGGAGTTGAGC...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp GTCCTGTCCCCCTTAAATCCATCCTCCATATACCAGCCATGTACATaGTGTGTCACTCTCTCAGGTGTCAGTGTGATCACATGGACCCTT +
Preference number: 5 (lower is better)
Translates to: VLSPLNPSSIYQPCT*CVTLSGVSVITWTL
Trigger: AAGGGTCCATGTGATCACACTGACACCTGAGAGAGTGACACACCATGTACATGGCTGGTATATGGAGGATGGATTTAAGGGGGACAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312350.9
CDS-3UTR CAA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGAAAGATGGTTCCAAGTaGGTCTCCAATTCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMKDGSK*VSNSSQ
Trigger: TTGGCTGGAATTGGAGACCAACTTGGAACCATCTTT...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTTTGTTGGGCCGGTTGTaGATGCTCTCCTGGGATGAG +
Preference number: 5 (lower is better)
Translates to: AIAPFRTCALICFQQIPGLLGRL*MLSWDE
Trigger: CTCATCCCAGGAGAGCATCAACAACCGGCCCAACAA...ACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGAGGTTGTTGGGCCGGTaGTTGATGCTCTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRRLLGR*LMLSWD
Trigger: ATCCCAGGAGAGCATCAACAACCGGCCCAACAACCT...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCATCCGGCTCCCGGTCTTaGGTGTCCGTGGGTATCATT +
Preference number: 5 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDASGSRS*VSVGII
Trigger: AATGATACCCACGGACACCAAAGACCGGGAGCCGGA...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGAATTTCATTGCTTCGTaGCCCAGAAGGGGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWNFIAS*PRRGRN
Trigger: ATTTCTTCCCCTTCTGGGCAACGAAGCAATGAAATT...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CAA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGCCATGGTACCAGTGGTaGAGGATGTCGTGGGTACAA +
Preference number: 5 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQPWYQW*RMSWVQ
Trigger: TTGTACCCACGACATCCTCAACCACTGGTACCATGG...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GAACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAACTCTGTGTGACTGATTaGACTCATTTGGGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: EPATCTDTLGVSCVCYLKLCVTD*THLGKH
Trigger: ATGCTTCCCCAAATGAGTCAAATCAGTCACACAGAG...TTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGTGTCTTTGCACACAATaGCATCCTAACAGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQCLCTQ*HPNSEK
Trigger: TTTCTCACTGTTAGGATGCAATTGTGTGCAAAGACA...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATGGACTGACTCCCGCATaGTCAGCATCAAGAGCATGC +
Preference number: 5 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNGLTPA*SASRAC
Trigger: GCATGCTCTTGATGCTGACAATGCGGGAGTCAGTCC...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAACTCAGCCGTGACATaGGCCTTCCACTCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSNSAVT*AFHSAA
Trigger: TGCGGCAGAGTGGAAGGCCAATGTCACGGCTGAGTT...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCAACTCAGCCGTGACATaGGCCTTCCACTCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: CTYYYDSTKKTHLFLSGGNSAVT*AFHSAA
Trigger: TGCGGCAGAGTGGAAGGCCAATGTCACGGCTGAGTT...GCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGGTGGACCCGAACTTGTaGATGATGTTGTCCTCGGAC +
Preference number: 5 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRVDPNL*MMLSSD
Trigger: GTCCGAGGACAACATCATCAACAAGTTCGGGTCCAC...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GGCATGATCCGAATTTGGACACCAGTCTCCCAAGTACATCTGGTCTCCATTAATGTGGACCCGAACTTGTaGATGATGTTGTCCTCGGAC +
Preference number: 5 (lower is better)
Translates to: GMIRIWTPVSQVHLVSINVDPNL*MMLSSD
Trigger: GTCCGAGGACAACATCATCAACAAGTTCGGGTCCAC...ATTAATGGAGACCAGATGTACTTGGGAGACTGGTGTCCAAATTCGGATCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTATCCTTGTTTTTCCTCTaGGTGAGTCTGGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: RHTCFFQEAGLRNSCPCLSLFFL*VSLEVD
Trigger: GTCCACCTCCAGACTCACCAAGAGGAAAAACAAGGA...TAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTATCTTCAAGTAATGAGTaGTTCTCCGGCTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: RHTCFFQEAGLRNSCPCLSSSNE*FSGSRS
Trigger: AGACCGGGAGCCGGAGAACAACTCATTACTTGAAGA...TAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTAGTTTATTGTCACCATaGCACCCACTGAGGAAAATG +
Preference number: 5 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPSLLSP*HPLRKM
Trigger: CATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTTTCCAAATCAGTTTATaGTCACCATTGCACCCACTG +
Preference number: 5 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPFQISL*SPLHPL
Trigger: CAGTGGGTGCAATGGTGACAATAAACTGATTTGGAA...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTTGTGCCCTTCTCTCTCAGCATCTTaGCGAGAGTATTTCATAGGT +
Preference number: 5 (lower is better)
Translates to: GVCRGNPLSHVYTKTLCPSLSAS*REYFIG
Trigger: ACCTATGAAATACTCTCGCAAAGATGCTGAGAGAGA...AGGGCACAAGGTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGACGTGTGCTCTTTCTTaGTGTGAAATCGAAACATTT +
Preference number: 5 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQTCALS*CEIETF
Trigger: AAATGTTTCGATTTCACACAAAGAAAGAGCACACGT...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GGTCTAAGGAATAGCTGCCCTTGTCTACGTGTGTGCCCAGGTAGCACTGCCCAGCATGAAGTACTACAATaGACTGCAAATAACAACAGC +
Preference number: 5 (lower is better)
Translates to: GLRNSCPCLRVCPGSTAQHEVLQ*TANNNS
Trigger: GCTGTTGTTATTTGCAGTCAATTGTAGTACTTCATG...CTGGGCAGTGCTACCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTATGGATTTATCATCATaGTCACTGGGTCCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPMDLSS*SLGPLS
Trigger: AGACAGGGGACCCAGTGACAATGATGATAAATCCAT...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGGTCTGCAAGCCCCCTaGGGAGGTGCCTTCCATCCT +
Preference number: 5 (lower is better)
Translates to: RSMDSLIRKLRLVRITEEGLQAP*GGAFHP
Trigger: AGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACC...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCAGTGGCTGCTGTTGTaGGAAGAGTTTCCTATTGGA +
Preference number: 5 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDQWLLL*EEFPIG
Trigger: TCCAATAGGAAACTCTTCCAACAACAGCAGCCACTG...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GCACATGCCAAAATGTCAACTCCAACGCTAGTTACACATAACCAGCTCCCACCCAGACCTTCTCCACTCTaGCAATGCTTTTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: AHAKMSTPTLVTHNQLPPRPSPL*QCFSQR
Trigger: TCTTTGGGAAAAGCATTGCAAGAGTGGAGAAGGTCT...GGGTGGGAGCTGGTTATGTGTAACTAGCGTTGGAGTTGACATTTTGGCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTATCTGCCGCATGGGCCTaGATTTCACCCACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLSAAWA*ISPTSS
Trigger: AGAAGAGGTGGGTGAAATCAAGGCCCATGCGGCAGA...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCTTCAGGCGCAGGTTGTaGGGCCGGTTGTTGATGCTC +
Preference number: 5 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFFRRRL*GRLLML
Trigger: GAGCATCAACAACCGGCCCAACAACCTGCGCCTGAA...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ATGGTACCAGTGGTTGAGGATGTCGTGGGTACAACTTTCCCTGGAGGTCAGAAATGGTGTGTCCTGCGTTaGCTATCTGAAATGAAGTTC +
Preference number: 5 (lower is better)
Translates to: MVPVVEDVVGTTFPGGQKWCVLR*LSEMKF
Trigger: GAACTTCATTTCAGATAGCAAACGCAGGACACACCA...TTTCTGACCTCCAGGGAAAGTTGTACCCACGACATCCTCAACCACTGGTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ATGGTACCAGTGGTTGAGGATGTCGTGGGTACAACTTTCCCTGGAGGTCAGAAAAGCAGGCTTCTGTCATaGGTTAAGGTGATATCCACA +
Preference number: 5 (lower is better)
Translates to: MVPVVEDVVGTTFPGGQKSRLLS*VKVIST
Trigger: TGTGGATATCACCTTAACCAATGACAGAAGCCTGCT...TTTCTGACCTCCAGGGAAAGTTGTACCCACGACATCCTCAACCACTGGTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ATGGTACCAGTGGTTGAGGATGTCGTGGGTACAACTTTCCCTGGAGGTCAGAAAGACTTTGGTCAGACTTaGAATACCAGCTCTACCACT +
Preference number: 5 (lower is better)
Translates to: MVPVVEDVVGTTFPGGQKDFGQT*NTSSTT
Trigger: AGTGGTAGAGCTGGTATTCAAAGTCTGACCAAAGTC...TTTCTGACCTCCAGGGAAAGTTGTACCCACGACATCCTCAACCACTGGTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AAAACACACACACACACACACACAACGCTCAGTCCAAGACCAATGTCCTTCACATGCAGGGGCAACCCTTaGAGCCATGTTTACACAAAG +
Preference number: 5 (lower is better)
Translates to: KTHTHTHTTLSPRPMSFTCRGNP*SHVYTK
Trigger: CTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCA...TGTGAAGGACATTGGTCTTGGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GAAATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGATGCAGCTTAGTGCTTaGAACTATTTTATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: EMPLTCTARTGYVHGHSWMQLSA*NYFIPA
Trigger: AGCAGGAATAAAATAGTTCAAAGCACTAAGCTGCAT...CCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TTGCATATCACTTCTAGGCACCACTGCACCTTCTCCCTTCAAGCTCAGAGCCCTACTGATTTGACTCATTaGGGGAAGCATCTATGCACA +
Preference number: 5 (lower is better)
Translates to: LHITSRHHCTFSLQAQSPTDLTH*GKHLCT
Trigger: TGTGCATAGATGCTTCCCCAAATGAGTCAAATCAGT...AGGGCTCTGAGCTTGAAGGGAGAAGGTGCAGTGGTGCCTAGAAGTGATATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AATGCCCTTAACATGTACGGCCAGAACCGGCTACGTGCACGGACACTCTTGGTGTCCAGAAGGTCTTTGTaGCAATTTTTCTCCATCATT +
Preference number: 5 (lower is better)
Translates to: NALNMYGQNRLRARTLLVSRRSL*QFFSII
Trigger: AATGATGGAGAAAAATTGCAACAAAGACCTTCTGGA...CACCAAGAGTGTCCGTGCACGTAGCCGGTTCTGGCCGTACATGTTAAGGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCTATTCGGACTGACTCCCGCATaGTCAGCATCAAGAGCATGC +
Preference number: 5 (lower is better)
Translates to: RKLRLVRITEEVPVIYLFGLTPA*SASRAC
Trigger: GCATGCTCTTGATGCTGACAATGCGGGAGTCAGTCC...GAATAGGTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATCAGTGGCTGCTGTTGTaGGAAGAGTTTCCTATTGGA +
Preference number: 5 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYQWLLL*EEFPIG
Trigger: TCCAATAGGAAACTCTTCCAACAACAGCAGCCACTG...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGTCTGCCGCATGGGCCTaGATTTCACCCACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: CAHITTTPLKRHTCFFQESAAWA*ISPTSS
Trigger: AGAAGAGGTGGGTGAAATCAAGGCCCATGCGGCAGA...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTCTGCCGCATGGGCCTaGATTTCACCCACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWSAAWA*ISPTSS
Trigger: AGAAGAGGTGGGTGAAATCAAGGCCCATGCGGCAGA...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGGATCTTCTTTGATTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGAACTCAGCCGTGACATaGGCCTTCCACTCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: RIFFDFVHHILGQMSQGMNSAVT*AFHSAA
Trigger: TGCGGCAGAGTGGAAGGCCAATGTCACGGCTGAGTT...CATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAACTTGTTGATGATGTaGTCCTCGGACGCACCCTGC +
Preference number: 5 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSNLLMM*SSDAPC
Trigger: GCAGGGTGCGTCCGAGGACAACATCATCAACAAGTT...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCTCCTTGTTTTTCCTCTaGGTGAGTCTGGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPSLFFL*VSLEVD
Trigger: GTCCACCTCCAGACTCACCAAGAGGAAAAACAAGGA...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTACCCACAGACATTCATTaGGAGCATAGAAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: RHTCFFQEAGLRNSCPCLPTDIH*EHRKTR
Trigger: CCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGG...TAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACCGGCTACGTGCACGGACACTCTTGGTGTGTCCTGCGTTTGCTATCTGAAATGGGGTACATTTTCTTTTaGTTTGGAGATAGCGAGATT +
Preference number: 5 (lower is better)
Translates to: TGYVHGHSWCVLRLLSEMGYIFF*FGDSEI
Trigger: AATCTCGCTATCTCCAAACAAAAAGAAAATGTACCC...CATTTCAGATAGCAAACGCAGGACACACCAAGAGTGTCCGTGCACGTAGCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGTGCTCTGTGTTAGCTTATCGTTaGCCTGGGAACAATCAGTCT +
Preference number: 5 (lower is better)
Translates to: CTFSYVCSDLLPTNSRCSVLAYR*PGNNQS
Trigger: AGACTGATTGTTCCCAGGCAAACGATAAGCTAACAC...AGAGCACCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATCCATGGTACCAGTGGTaGAGGATGTCGTGGGTACAA +
Preference number: 5 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNPWYQW*RMSWVQ
Trigger: TTGTACCCACGACATCCTCAACCACTGGTACCATGG...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TTATTACTGAGTCGACACAGGATGTCACCAGTGAGCCTCATCTCCAGTCCAATGGACTTTGGTCAGACTTaGAATACCAGCTCTACCACT +
Preference number: 5 (lower is better)
Translates to: LLLSRHRMSPVSLISSPMDFGQT*NTSSTT
Trigger: AGTGGTAGAGCTGGTATTCAAAGTCTGACCAAAGTC...CATTGGACTGGAGATGAGGCTCACTGGTGACATCCTGTGTCGACTCAGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACCTCTGTGTGACTGATTaGACTCATTTGGGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDLCVTD*THLGKH
Trigger: ATGCTTCCCCAAATGAGTCAAATCAGTCACACAGAG...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCGGGCATGATCCGAATTaGGACACCAGTCTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: KSNCTFSYVCSDLLPTNSGHDPN*DTSLPS
Trigger: ACTTGGGAGACTGGTGTCCAAATTCGGATCATGCCC...GGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATCACCCACCTCTTCTTTaGTCTTTTTGGACAGAACCC +
Preference number: 5 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNHPPLL*SFWTEP
Trigger: GGGTTCTGTCCAAAAAGACAAAAGAAGAGGTGGGTG...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGTGGACCCGAACTTGTaGATGATGTTGTCCTCGGAC +
Preference number: 5 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEVDPNL*MMLSSD
Trigger: GTCCGAGGACAACATCATCAACAAGTTCGGGTCCAC...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATATGGCTGTGCTGGAGTaGTCTGAGTTACACATCTTT +
Preference number: 5 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYMAVLE*SELHIF
Trigger: AAAGATGTGTAACTCAGACAACTCCAGCACAGCCAT...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAATCCGGCTCCCGGTCTTaGGTGTCCGTGGGTATCATT +
Preference number: 5 (lower is better)
Translates to: RSMDSLIRKLRLVRITEESGSRS*VSVGII
Trigger: AATGATACCCACGGACACCAAAGACCGGGAGCCGGA...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AAAACACACACACACACACACACAACGCTCAGTCCAAGACCAATGTCCTTCACACCCACAGACATTCATTaGGAGCATAGAAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: KTHTHTHTTLSPRPMSFTPTDIH*EHRKTR
Trigger: CCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGG...TGTGAAGGACATTGGTCTTGGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATTGGGAAAATATTAGCTaGGGGGAGAACTGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNWENIS*GENWRG
Trigger: CCCTCTCCAGTTCTCCCCCAAGCTAATATTTTCCCA...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CAA 90 bp AGGATCTTCTTTGATTTTGTTCATCACATTCTTGGCCAAATGTCTCAGGGAATGAGACCTTGTGCCCTCTaGGTGGTGGAGATTCCACCA +
Preference number: 5 (lower is better)
Translates to: RIFFDFVHHILGQMSQGMRPCAL*VVEIPP
Trigger: TGGTGGAATCTCCACCACCAAGAGGGCACAAGGTCT...CATTCCCTGAGACATTTGGCCAAGAATGTGATGAACAAAATCAAAGAAGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CCAAAGGGCAAGAGACTAAGCTCTCACCTTAACCTAAAATGGGCAAGACAATTAGTTTACACAAAGACCTaGTGCCCTCTTGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: PKGKRLSSHLNLKWARQLVYTKT*CPLGGG
Trigger: TCCACCACCAAGAGGGCACAAGGTCTTTGTGTAAAC...TAATTGTCTTGCCCATTTTAGGTTAAGGTGAGAGCTTAGTCTCTTGCCCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ATGTACAGTAGGTGTCTGCAGGGGCAACCCTTTGAGCCATGTTTACACAAAGACGAATGTGTAGCAGCTTaGACCTATCACGTGTATTCT +
Preference number: 5 (lower is better)
Translates to: MYSRCLQGQPFEPCLHKDECVAA*TYHVYS
Trigger: AGAATACACGTGATAGGTCAAAGCTGCTACACATTC...GTCTTTGTGTAAACATGGCTCAAAGGGTTGCCCCTGCAGACACCTACTGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATTGGAGTATGGATGGGTaGGTGAAGTCCAATGAAGGT +
Preference number: 5 (lower is better)
Translates to: TTPLKRHTCFFQEAGLRNWSMDG*VKSNEG
Trigger: ACCTTCATTGGACTTCACCAACCCATCCATACTCCA...ATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGAACCCAAAGCAGCCATTTCCTCAGGTGTGTGTGTGTGTGTGTATGTGTGCGTTCTTCCAGAAGGTCTTaGTTGCAATTTTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: RTQSSHFLRCVCVCVCVRSSRRS*LQFFSI
Trigger: GATGGAGAAAAATTGCAACAAAGACCTTCTGGAAGA...ACGCACACATACACACACACACACACACCTGAGGAAATGGCTGCTTTGGGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TTGTCACCATTGCACCCACTGAGGAAAATGCATGATTGGCCTTTAACCACGCAGAAAATACAAAAGATTTaGCCTCCTTCAGTGCTCGGA +
Preference number: 5 (lower is better)
Translates to: LSPLHPLRKMHDWPLTTQKIQKI*PPSVLG
Trigger: TCCGAGCACTGAAGGAGGCAAAATCTTTTGTATTTT...CTGCGTGGTTAAAGGCCAATCATGCATTTTCCTCAGTGGGTGCAATGGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCAGACCTTCTCCACTCTaGCAATGCTTTTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: TEQQATGIMQGNCFGISTRPSPL*QCFSQR
Trigger: TCTTTGGGAAAAGCATTGCAAGAGTGGAGAAGGTCT...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAAGGTTGTTGGGCCGGTaGTTGATGCTCTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSRLLGR*LMLSWD
Trigger: ATCCCAGGAGAGCATCAACAACCGGCCCAACAACCT...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGAAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTTCTTCAAGTAATGAGTaGTTCTCCGGCTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: RKAIAPFRTCALICFQQISSSNE*FSGSRS
Trigger: AGACCGGGAGCCGGAGAACAACTCATTACTTGAAGA...AATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCCAGGCATCATGCAAGGCAATaGTTTTGGTATTTCTACCCC +
Preference number: 5 (lower is better)
Translates to: SNCTFSYVCSDLLPTNSRHHARQ*FWYFYP
Trigger: GGGGTAGAAATACCAAAACAATTGCCTTGCATGATG...CCTGGAATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAGGAATAGCTGCCCTTGTCTATTGGAGATAGCGAGATaGGATCTTATCACTATGTCT +
Preference number: 5 (lower is better)
Translates to: RHTCFFQEAGLRNSCPCLLEIAR*DLITMS
Trigger: AGACATAGTGATAAGATCCAATCTCGCTATCTCCAA...TAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTGAAAGAAACAGGTGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCAGACACTGTAGTGAAGTaGAAAGCAGACTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDADTVVK*KADFGQ
Trigger: CTGACCAAAGTCTGCTTTCAACTTCACTACAGTGTC...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GATTTTTCACCTAAGAATCAAGAACACAAAGTAGATACCAAATCTCAGGCACCTAGACCTTGTGCCCTCTaGGTGGTGGAGATTCCACCA +
Preference number: 5 (lower is better)
Translates to: DFSPKNQEHKVDTKSQAPRPCAL*VVEIPP
Trigger: TGGTGGAATCTCCACCACCAAGAGGGCACAAGGTCT...AGGTGCCTGAGATTTGGTATCTACTTTGTGTTCTTGATTCTTAGGTGAAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGGTGCTCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATACTGATTTGACTCATTaGGGGAAGCATCTATGCACA +
Preference number: 5 (lower is better)
Translates to: RCSQVPTDIHLEHRKTRYTDLTH*GKHLCT
Trigger: TGTGCATAGATGCTTCCCCAAATGAGTCAAATCAGT...ATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGAGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGAAAATTCAGTGCCTGCTaGCCAGTGAAGCAAAAGACA +
Preference number: 5 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRKFSAC*PVKQKT
Trigger: TGTCTTTTGCTTCACTGGCAAGCAGGCACTGAATTT...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TCCCACCCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTATCCAGAAGGTCTTTGTaGCAATTTTTCTCCATCATT +
Preference number: 5 (lower is better)
Translates to: SHPIRSPSVCAHITTTPLSRRSL*QFFSII
Trigger: AATGATGGAGAAAAATTGCAACAAAGACCTTCTGGA...TAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGGGTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGTGCACATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGCACCCACCTCTTCTTTaGTCTTTTTGGACAGAACCC +
Preference number: 5 (lower is better)
Translates to: CAHITTTPLKRHTCFFQEHPPLL*SFWTEP
Trigger: GGGTTCTGTCCAAAAAGACAAAAGAAGAGGTGGGTG...CTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GATTTTTCACCTAAGAATCAAGAACACAAAGTAGATACCAAATCTCAGGCACCTAACTTGTTGATGATGTaGTCCTCGGACGCACCCTGC +
Preference number: 5 (lower is better)
Translates to: DFSPKNQEHKVDTKSQAPNLLMM*SSDAPC
Trigger: GCAGGGTGCGTCCGAGGACAACATCATCAACAAGTT...AGGTGCCTGAGATTTGGTATCTACTTTGTGTTCTTGATTCTTAGGTGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGAGGTGGACCCGAACTaGTTGATGATGTTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSEVDPN*LMMLSS
Trigger: CGAGGACAACATCATCAACAAGTTCGGGTCCACCTC...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTCGGGCAAGGTCTTTTaGAGGTCCTTGTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWSGKVF*RSLFFL
Trigger: GAGGAAAAACAAGGACCTCAAAAAGACCTTGCCCGA...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTATGGCTGTGCTGGAGTaGTCTGAGTTACACATCTTT +
Preference number: 5 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSMAVLE*SELHIF
Trigger: AAAGATGTGTAACTCAGACAACTCCAGCACAGCCAT...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCATGGCTGTGCTGGAGTaGTCTGAGTTACACATCTTT +
Preference number: 5 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSMAVLE*SELHIF
Trigger: AAAGATGTGTAACTCAGACAACTCCAGCACAGCCAT...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCAAGTTCACCTGTTTTCTaGGCGTCTCGATTGGAAATT +
Preference number: 5 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDASSPVF*ASRLEI
Trigger: AATTTCCAATCGAGACGCCAAGAAAACAGGTGAACT...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CAA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCTTAACCACGCAGCAGTaGATGTCATGTTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSLTTQQ*MSCFHH
Trigger: GTGGTGAAAACATGACATCAACTGCTGCGTGGTTAA...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TCTCAGGTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCAAGTTTATTGTCACCATaGCACCCACTGAGGAAAATG +
Preference number: 5 (lower is better)
Translates to: SQVPTDIHLEHRKTRYDASLLSP*HPLRKM
Trigger: CATTTTCCTCAGTGGGTGCAATGGTGACAATAAACT...TGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGACCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCTTCCAAATCAGTTTATaGTCACCATTGCACCCACTG +
Preference number: 5 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPFQISL*SPLHPL
Trigger: CAGTGGGTGCAATGGTGACAATAAACTGATTTGGAA...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAAGCAACTGCCTGGTGTaGCCAGGTCCAAATGCTTTC +
Preference number: 5 (lower is better)
Translates to: RSMDSLIRKLRLVRITEESNCLV*PGPNAF
Trigger: GAAAGCATTTGGACCTGGCAACACCAGGCAGTTGCT...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTCTAAATTCAGTGCCTGCTaGCCAGTGAAGCAAAAGACA +
Preference number: 5 (lower is better)
Translates to: YYYDSTKKTHLFLSGGWSKFSAC*PVKQKT
Trigger: TGTCTTTTGCTTCACTGGCAAGCAGGCACTGAATTT...AGACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGAGCAGTGGCTGCTGTTGTaGGAAGAGTTTCCTATTGGA +
Preference number: 5 (lower is better)
Translates to: RKTRYDALNGWYQNSSSEQWLLL*EEFPIG
Trigger: TCCAATAGGAAACTCTTCCAACAACAGCAGCCACTG...CTCTGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATGGTTGGAAAGATGGTTCCAAGTaGGTCTCCAATTCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: TDIHLEHRKTRYDALNGWKDGSK*VSNSSQ
Trigger: TTGGCTGGAATTGGAGACCAACTTGGAACCATCTTT...CCAACCATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATCATCATGCAAGGCAATaGTTTTGGTATTTCTACCCC +
Preference number: 5 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNHHARQ*FWYFYP
Trigger: GGGGTAGAAATACCAAAACAATTGCCTTGCATGATG...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTTCTCTCTCAGCATCTTaGCGAGAGTATTTCATAGGT +
Preference number: 5 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGSLSAS*REYFIG
Trigger: ACCTATGAAATACTCTCGCAAAGATGCTGAGAGAGA...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGAAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTCAACTACAATGGCCCTaGACAAGTATCTGTGCTCAA +
Preference number: 5 (lower is better)
Translates to: RKAIAPFRTCALICFQQIQLQWP*TSICAQ
Trigger: TTGAGCACAGATACTTGTCAAGGGCCATTGTAGTTG...AATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp ACAGAACAGCAAGCCACTGGCATCATGCAAGGCAATTGTTTTGGTATTTCTACCTGTCTTTGCACACAATaGCATCCTAACAGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: TEQQATGIMQGNCFGISTCLCTQ*HPNSEK
Trigger: TTTCTCACTGTTAGGATGCAATTGTGTGCAAAGACA...GGTAGAAATACCAAAACAATTGCCTTGCATGATGCCAGTGGCTTGCTGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGAGTGGAGTATGGATGGGTaGGTGAAGTCCAATGAAGGT +
Preference number: 5 (lower is better)
Translates to: RKTRYDALNGWYQNSSSEWSMDG*VKSNEG
Trigger: ACCTTCATTGGACTTCACCAACCCATCCATACTCCA...CTCTGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS CCA 90 bp TTTTTCGAAAGACCTTCTCCACTCTTGCAATGCTTTTCCCAAAGATaGTTCCAAGTTGGTCTCCAATTCCAGCCAATAAGAAACCAAAGA +
Preference number: 5 (lower is better)
Translates to: FFERPSPLLQCFSQR*FQVGLQFQPIRNQR
Trigger: TCTTTGGTTTCTTATTGGCTGGAATTGGAGACCAACTTGGAACCATCTTTGGGAAAAGCATTGCAAGAGTGGAGAAGGTCTTTCGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp GTCCCCACAGACATTCATTTGGAGCATAGAAAGACTAGGTATGATGCACTGAATAAAATACAAAAGATTTaGCCTCCTTCAGTGCTCGGA +
Preference number: 5 (lower is better)
Translates to: VPTDIHLEHRKTRYDALNKIQKI*PPSVLG
Trigger: TCCGAGCACTGAAGGAGGCAAAATCTTTTGTATTTT...ATTCAGTGCATCATACCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCATCGGGCAAGGTCTTTTaGAGGTCCTTGTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSSGKVF*RSLFFL
Trigger: GAGGAAAAACAAGGACCTCAAAAAGACCTTGCCCGA...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGATCTGAAATGAAGTTCTaGTTCTCTGATTCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRSEMKF*FSDSFW
Trigger: CCAAAAGGAATCAGAGAACAAGAACTTCATTTCAGA...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAGTCCCAGTTATCTACCGATTGGAAATTTCATaGCTTCGTTGCCCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: LIRKLRLVRITEEVPVIYRLEIS*LRCPEG
Trigger: CCCTTCTGGGCAACGAAGCAATGAAATTTCCAATCG...GTAGATAACTGGGACTTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS-3UTR CAA 90 bp AGATTGGATCTTATCACTATGTCTACCCTAAGACACCCAAGGGACAAAAAGCCCATGCAGCTTAGTGCTTaGAACTATTTTATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: RLDLITMSTLRHPRDKKPMQLSA*NYFIPA
Trigger: AGCAGGAATAAAATAGTTCAAAGCACTAAGCTGCAT...GGGCTTTTTGTCCCTTGGGTGTCTTAGGGTAGACATAGTGATAAGATCCAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CCAATCAGGTCCCCTTCTGTGTGTGCACATATTACTACGACTCCACTAAAAAGACATGAAGTACTACAATaGACTGCAAATAACAACAGC +
Preference number: 5 (lower is better)
Translates to: PIRSPSVCAHITTTPLKRHEVLQ*TANNNS
Trigger: GCTGTTGTTATTTGCAGTCAATTGTAGTACTTCATG...TCTTTTTAGTGGAGTCGTAGTAATATGTGCACACACAGAAGGGGACCTGATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CATATTACTACGACTCCACTAAAAAGACACACCTGTTTCTTTCAGGAGGCTGGTTCTTCCAGAAGGTCTTaGTTGCAATTTTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: HITTTPLKRHTCFFQEAGSSRRS*LQFFSI
Trigger: GATGGAGAAAAATTGCAACAAAGACCTTCTGGAAGA...ACCAGCCTCCTGAAAGAAACAGGTGTGTCTTTTTAGTGGAGTCGTAGTAATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp TGTCTCAGTGTGAATATTAAAAACACACACACACACACACACAACGCTCAGTCCTCTGAAATGAAGTTCTaGTTCTCTGATTCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: CLSVNIKNTHTHTHNAQSSEMKF*FSDSFW
Trigger: CCAAAAGGAATCAGAGAACAAGAACTTCATTTCAGA...GGACTGAGCGTTGTGTGTGTGTGTGTGTGTGTTTTTAATATTCACACTGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAACCCACAGACATTCATTaGGAGCATAGAAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: RSMDSLIRKLRLVRITEEPTDIH*EHRKTR
Trigger: CCTAGTCTTTCTATGCTCCAAATGAATGTCTGTGGG...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAATTAACCACGCAGCAGTaGATGTCATGTTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: RSMDSLIRKLRLVRITEELTTQQ*MSCFHH
Trigger: GTGGTGAAAACATGACATCAACTGCTGCGTGGTTAA...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGAAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTTTGGAGATAGCGAGATaGGATCTTATCACTATGTCT +
Preference number: 5 (lower is better)
Translates to: RKAIAPFRTCALICFQQILEIAR*DLITMS
Trigger: AGACATAGTGATAAGATCCAATCTCGCTATCTCCAA...AATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCAGACACTGTAGTGAAGTaGAAAGCAGACTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSDTVVK*KADFGQ
Trigger: CTGACCAAAGTCTGCTTTCAACTTCACTACAGTGTC...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGAAAAGCAATTGCACCTTTTCGTACGTGTGCTCTGATCTGCTTCCAACAAATTTCTGAAATGAAGTTCTaGTTCTCTGATTCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: RKAIAPFRTCALICFQQISEMKF*FSDSFW
Trigger: CCAAAAGGAATCAGAGAACAAGAACTTCATTTCAGA...AATTTGTTGGAAGCAGATCAGAGCACACGTACGAAAAGGTGCAATTGCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp CATAGAAAGACTAGGTATGATGCACTGAATGGTTGGTATCAAAATTCAAGCTCATTGTTCATCACATTCTaGGCCAAATGTCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: HRKTRYDALNGWYQNSSSLFITF*AKCLRE
Trigger: TTCCCTGAGACATTTGGCCAAGAATGTGATGAACAA...TGAGCTTGAATTTTGATACCAACCATTCAGTGCATCATACCTAGTCTTTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS-3UTR CAA 90 bp AGATCCATGGACAGTTTAATTAGGAAGCTTCGACTTGTTAGAATAACAGAGGAAACGTGTGCTCTTTCTTaGTGTGAAATCGAAACATTT +
Preference number: 5 (lower is better)
Translates to: RSMDSLIRKLRLVRITEETCALS*CEIETF
Trigger: AAATGTTTCGATTTCACACAAAGAAAGAGCACACGT...TTCCTCTGTTATTCTAACAAGTCGAAGCTTCCTAATTAAACTGTCCATGGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp GTTAGTGGCGCTCTTGGGCTGGCACACCGGTGCTGCTaGGGGAACGGCCATGGCTCGGCCGGCCGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: VSGALGLAHRCC*GNGHGSAGRRA
Trigger: CGCCCGCCGGCCGGCCGAGCCATGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556282.1
CDS GCA 72 bp CCCGTTAGTGGCGCTCTTGGGCTGGCACACCGGTGCTaGTGCGGGAACGGCCATGGCTCGGCCGGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: PVSGALGLAHRC*CGNGHGSAGRR
Trigger: CCGCCGGCCGGCCGAGCCATGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556282.1
CDS CCA 72 bp CCCTGCACTCGCCGGCCCCCAGCAGGAGACCCGGGCTaGCGGCCACTGCGTCCTGGGTGCACTCGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: PCTRRPPAGDPG*RPLRPGCTRWQ
Trigger: TTGCCACCGAGTGCACCCAGGACGCAGTGGCCGCCAGCCCGGGTCTCCTGCTGGGGGCCGGCGAGTGCAGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS GCA 72 bp CCCGCTGGTCCAGGCCCAGCCGCCGGCGCTCCATGCTaGGGATGGTGGCCGCCCGCTGCAGCTTATCGTGGA +
Preference number: 6 (lower is better)
Translates to: PAGPGPAAGAPC*GWWPPAAAYRG
Trigger: TCCACGATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGCGGCTGGGCCTGGACCAGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp TTGCCCGTTAGTGGCGCTCTTGGGCTGGCACACCGGTaGTGCTGCGGGAACGGCCATGGCTCGGCCGGCCGG +
Preference number: 6 (lower is better)
Translates to: LPVSGALGLAHR*CCGNGHGSAGR
Trigger: CCGGCCGGCCGAGCCATGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGGCAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556282.1
CDS CCA 72 bp CCAGGCCCAGCCGCCGGCGCTCCATGCTGCGGATGGTaGCCGCCCGCTGCAGCTTATCGTGGATCTCCACGC +
Preference number: 6 (lower is better)
Translates to: PGPAAGAPCCGW*PPAAAYRGSPR
Trigger: GCGTGGAGATCCACGATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGCGGCTGGGCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 72 bp TTCTCGGGGGACAGCATGTCCAGTGAGTGGGCCCGCTaGTCCAGGCCCAGCCGCCGGCGCTCCATGCTGCGG +
Preference number: 6 (lower is better)
Translates to: FSGDSMSSEWAR*SRPSRRRSMLR
Trigger: CCGCAGCATGGAGCGCCGGCGGCTGGGCCTGGACCAGCGGGCCCACTCACTGGACATGCTGTCCCCCGAGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 72 bp ACAGAGCGCTTCTCGGGGGACAGCATGTCCAGTGAGTaGGCCCGCTGGTCCAGGCCCAGCCGCCGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: TERFSGDSMSSE*ARWSRPSRRRS
Trigger: GGAGCGCCGGCGGCTGGGCCTGGACCAGCGGGCCCACTCACTGGACATGCTGTCCCCCGAGAAGCGCTCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 72 bp CCGGGCTGGCGGCCACTGCGTCCTGGGTGCACTCGGTaGCAAAGCGCTGCTACCGGGCACGGGTCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: PGWRPLRPGCTR*QSAATGHGSLQ
Trigger: CTGCAGAGACCCGTGCCCGGTAGCAGCGCTTTGCCACCGAGTGCACCCAGGACGCAGTGGCCGCCAGCCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CCA 72 bp CCCAGCAGGAGACCCGGGCTGGCGGCCACTGCGTCCTaGGTGCACTCGGTGGCAAAGCGCTGCTACCGGGCA +
Preference number: 6 (lower is better)
Translates to: PSRRPGLAATAS*VHSVAKRCYRA
Trigger: TGCCCGGTAGCAGCGCTTTGCCACCGAGTGCACCCAGGACGCAGTGGCCGCCAGCCCGGGTCTCCTGCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CAA 90 bp GTTGGAGTCGGAGCCGGAGCCGGGGGTTGCCCGTTAGTGGCGCTCTaGGGCTGGCACACCGGTGCTGCTGCGGGAACGGCCATGGCTCGG +
Preference number: 6 (lower is better)
Translates to: VGVGAGAGGCPLVAL*GWHTGAAAGTAMAR
Trigger: CCGAGCCATGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGGCAACCCCCGGCTCCGGCTCCGACTCCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556282.1
CDS CCA 72 bp GGTCCAGGCCCAGCCGCCGGCGCTCCATGCTGCGGATaGTGGCCGCCCGCTGCAGCTTATCGTGGATCTCCA +
Preference number: 6 (lower is better)
Translates to: GPGPAAGAPCCG*WPPAAAYRGSP
Trigger: TGGAGATCCACGATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGCGGCTGGGCCTGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp GTTGGAGTCGGAGCCGGAGCCGGGGGTTGCCCGTTAGTGGCGCTCTaGGGCTGGCACACCGGTGCTGCTGCGGGAACGGCCACCAAGGAA +
Preference number: 6 (lower is better)
Translates to: VGVGAGAGGCPLVAL*GWHTGAAAGTATKE
Trigger: TTCCTTGGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGGCAACCCCCGGCTCCGGCTCCGACTCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS GCA 72 bp CGCCGGCGCTCCATGCTGCGGATGGTGGCCGCCCGCTaGAGCTTATCGTGGATCTCCACGCTGAGCCTTCGC +
Preference number: 6 (lower is better)
Translates to: RRRSMLRMVAAR*SLSWISTLSLR
Trigger: GCGAAGGCTCAGCGTGGAGATCCACGATAAGCTGCAGCGGGCGGCCACCATCCGCAGCATGGAGCGCCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp GTTGGAGTCGGAGCCGGAGCCGGGGGTTGCCCGTTAGTGGCGCTCTaGGGCTGGCACACCGGTGCTGCTGCGGGAACGGCCACTGAATCA +
Preference number: 6 (lower is better)
Translates to: VGVGAGAGGCPLVAL*GWHTGAAAGTATES
Trigger: TGATTCAGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGGCAACCCCCGGCTCCGGCTCCGACTCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312350.9
CDS CAA 90 bp GTTGGAGTCGGAGCCGGAGCCGGGGGTTGCCCGTTAGTGGCGCTCTaGGGCTGGCACACCGGTGCTGCTGCGGGAACGGCCACTTTAGGA +
Preference number: 6 (lower is better)
Translates to: VGVGAGAGGCPLVAL*GWHTGAAAGTATLG
Trigger: TCCTAAAGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGGCAACCCCCGGCTCCGGCTCCGACTCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS GCA 72 bp TTGTCCTCGGACGCACCCTGCCCATGCTTGTTCAGCTaGTCCGGCCCCTTCAGGCGCAGGTTGTTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: LSSDAPCPCLFS*SGPFRRRLLGR
Trigger: CCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp GCCCACTGCAGTGTCACTCCAGCCCCCGAAGGCGTGTaGGCACACACTCCCGCACACACACACCCGCACACA +
Preference number: 6 (lower is better)
Translates to: AHCSVTPAPEGV*AHTPAHTHPHT
Trigger: TGTGTGCGGGTGTGTGTGTGCGGGAGTGTGTGCGCACACGCCTTCGGGGGCTGGAGTGACACTGCAGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS CCA 72 bp ATGCTGCGGATGGTGGCCGCCCGCTGCAGCTTATCGTaGATCTCCACGCTGAGCCTTCGCCGTGTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: MLRMVAARCSLS*ISTLSLRRVSR
Trigger: CCGGGAGACACGGCGAAGGCTCAGCGTGGAGATCCACGATAAGCTGCAGCGGGCGGCCACCATCCGCAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp CTCGGTGGCAAAGCGCTGCTACCGGGCACGGGTCTCTaGAGCTCAAAACCTGCCCGGCTGGAGCGCACCAAT +
Preference number: 6 (lower is better)
Translates to: LGGKALLPGTGL*SSKPARLERTN
Trigger: ATTGGTGCGCTCCAGCCGGGCAGGTTTTGAGCTGCAGAGACCCGTGCCCGGTAGCAGCGCTTTGCCACCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS GCA 72 bp GCCACTGCGTCCTGGGTGCACTCGGTGGCAAAGCGCTaGTACCGGGCACGGGTCTCTGCAGCTCAAAACCTG +
Preference number: 6 (lower is better)
Translates to: ATASWVHSVAKR*YRARVSAAQNL
Trigger: CAGGTTTTGAGCTGCAGAGACCCGTGCCCGGTAGCAGCGCTTTGCCACCGAGTGCACCCAGGACGCAGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CAA 72 bp TCCGGCCCCTTCAGGCGCAGGTTGTTGGGCCGGTTGTaGATGCTCTCCTGGGATGAGGCCTTGAAGCGGCCG +
Preference number: 6 (lower is better)
Translates to: SGPFRRRLLGRL*MLSWDEALKRP
Trigger: CGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp TTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTTGTTGGGCCGGTTGTaGATGCTCTCCTGGGATGAGGCCTTGAAGCGGCCGGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: FSCSGPFRRRLLGRL*MLSWDEALKRPVSR
Trigger: CCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp CCCGTTAGTGGCGCTCTTGGGCTGGCACACCGGTGCTaGTGCGGGAACGGCCACTTTAGGATCCCAGTTCAC +
Preference number: 6 (lower is better)
Translates to: PVSGALGLAHRC*CGNGHFRIPVH
Trigger: GTGAACTGGGATCCTAAAGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS CCA 72 bp CCCCTTGGGAGGTGCCTTCCATCCTGGCTACCACTGTaGCTCGGGAGGAAATGGACAGGCGCGGAGTTGGAG +
Preference number: 6 (lower is better)
Translates to: PLGRCLPSWLPL*LGRKWTGAELE
Trigger: CTCCAACTCCGCGCCTGTCCATTTCCTCCCGAGCCACAGTGGTAGCCAGGATGGAAGGCACCTCCCAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS CCA 72 bp AGGCGCAGGTTGTTGGGCCGGTTGTTGATGCTCTCCTaGGATGAGGCCTTGAAGCGGCCGGTGTCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: RRRLLGRLLMLS*DEALKRPVSRA
Trigger: TGCCCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 72 bp TGCTCCGGCCCCTTCAGGCGCAGGTTGTTGGGCCGGTaGTTGATGCTCTCCTGGGATGAGGCCTTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: CSGPFRRRLLGR*LMLSWDEALKR
Trigger: CCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp TTGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTTGTTGGGCCGGTaGTTGATGCTCTCCTGGGATGAGGCCTTGAAGCGGCCGGTGTCC +
Preference number: 6 (lower is better)
Translates to: LFSCSGPFRRRLLGR*LMLSWDEALKRPVS
Trigger: GGACACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp CGCAGGTTGTTGGGCCGGTTGTTGATGCTCTCCTGGGATGAGGCCTaGAAGCGGCCGGTGTCCAGGGCAGCAAAGACAGAGCGCTTCTCG +
Preference number: 6 (lower is better)
Translates to: RRLLGRLLMLSWDEA*KRPVSRAAKTERFS
Trigger: CGAGAAGCGCTCTGTCTTTGCTGCCCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp TGCCCATGCTTGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTTGTaGGGCCGGTTGTTGATGCTCTCCTGGGATGAGGCCTTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: CPCLFSCSGPFRRRL*GRLLMLSWDEALKR
Trigger: CCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp CCCTGCCCATGCTTGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTaGTTGGGCCGGTTGTTGATGCTCTCCTGGGATGAGGCCTTGAAG +
Preference number: 6 (lower is better)
Translates to: PCPCLFSCSGPFRRR*LGRLLMLSWDEALK
Trigger: CTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp CCGAACTTGTTGATGATGTTGTCCTCGGACGCACCCTGCCCATGCTaGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTTGTTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: PNLLMMLSSDAPCPC*FSCSGPFRRRLLGR
Trigger: CCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp GTTAGTGGCGCTCTTGGGCTGGCACACCGGTGCTGCTaGGGGAACGGCCACTTTAGGATCCCAGTTCACCTG +
Preference number: 6 (lower is better)
Translates to: VSGALGLAHRCC*GNGHFRIPVHL
Trigger: CAGGTGAACTGGGATCCTAAAGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS GCA 72 bp TTGCCCGTTAGTGGCGCTCTTGGGCTGGCACACCGGTaGTGCTGCGGGAACGGCCACTTTAGGATCCCAGTT +
Preference number: 6 (lower is better)
Translates to: LPVSGALGLAHR*CCGNGHFRIPV
Trigger: AACTGGGATCCTAAAGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS GCA 72 bp CCCGTTAGTGGCGCTCTTGGGCTGGCACACCGGTGCTaGTGCGGGAACGGCCACCAAGGAAAGAAAGAAGTC +
Preference number: 6 (lower is better)
Translates to: PVSGALGLAHRC*CGNGHQGKKEV
Trigger: GACTTCTTTCTTTCCTTGGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CAA 72 bp TTGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTTGTaGGGCCGGTTGTTGATGCTCTCCTGGGATGAGGCC +
Preference number: 6 (lower is better)
Translates to: LFSCSGPFRRRL*GRLLMLSWDEA
Trigger: GGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp GATGGCAACCACCGTCTTCCACTTCATGACGGTCTGCAAGCCCCCTaGGGAGGTGCCTTCCATCCTGGCTACCACTGTGGCTCGGGAGGA +
Preference number: 6 (lower is better)
Translates to: DGNHRLPLHDGLQAP*GGAFHPGYHCGSGG
Trigger: TCCTCCCGAGCCACAGTGGTAGCCAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGGTGGTTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS CAA 90 bp TCCACGCTGAGCCTTCGCCGTGTCTCCCGGAACTCAGCCGTGACATaGGCCTTCCACTCTGCCGCATGGGCCTTGATTTCACCCACCTCT +
Preference number: 6 (lower is better)
Translates to: STLSLRRVSRNSAVT*AFHSAAWALISPTS
Trigger: AGAGGTGGGTGAAATCAAGGCCCATGCGGCAGAGTGGAAGGCCAATGTCACGGCTGAGTTCCGGGAGACACGGCGAAGGCTCAGCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS TCA 72 bp CAGGTTGTTGGGCCGGTTGTTGATGCTCTCCTGGGATaGGGCCTTGAAGCGGCCGGTGTCCAGGGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: QVVGPVVDALLG*GLEAAGVQGSK
Trigger: TTTGCTGCCCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp TTGTTGATGATGTTGTCCTCGGACGCACCCTGCCCATaGTTGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: LLMMLSSDAPCP*LFSCSGPFRRR
Trigger: CCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp TTGCCCGTTAGTGGCGCTCTTGGGCTGGCACACCGGTaGTGCTGCGGGAACGGCCACCAAGGAAAGAAAGAA +
Preference number: 6 (lower is better)
Translates to: LPVSGALGLAHR*CCGNGHQGKKE
Trigger: TTCTTTCTTTCCTTGGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAACGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CAA 72 bp CACCGTCTTCCACTTCATGACGGTCTGCAAGCCCCCTaGGGAGGTGCCTTCCATCCTGGCTACCACTGTGGC +
Preference number: 6 (lower is better)
Translates to: HRLPLHDGLQAP*GGAFHPGYHCG
Trigger: GCCACAGTGGTAGCCAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS CAA 72 bp TTGGGCCGGTTGTTGATGCTCTCCTGGGATGAGGCCTaGAAGCGGCCGGTGTCCAGGGCAGCAAAGACAGAG +
Preference number: 6 (lower is better)
Translates to: LGRLLMLSWDEA*KRPVSRAAKTE
Trigger: CTCTGTCTTTGCTGCCCTGGACACCGGCCGCTTCAAGGCCTCATCCCAGGAGAGCATCAACAACCGGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 72 bp TGCTTGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTaGTTGGGCCGGTTGTTGATGCTCTCCTGGGATGAG +
Preference number: 6 (lower is better)
Translates to: CLFSCSGPFRRR*LGRLLMLSWDE
Trigger: CTCATCCCAGGAGAGCATCAACAACCGGCCCAACAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 72 bp TTGATGATGTTGTCCTCGGACGCACCCTGCCCATGCTaGTTCAGCTGCTCCGGCCCCTTCAGGCGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LMMLSSDAPCPC*FSCSGPFRRRL
Trigger: CAACCTGCGCCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp CCGAACTTGTTGATGATGTTGTCCTCGGACGCACCCTaGCCATGCTTGTTCAGCTGCTCCGGCCCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: PNLLMMLSSDAP*PCLFSCSGPFR
Trigger: CCTGAAGGGGCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp AGCTCAAAACCTGCCCGGCTGGAGCGCACCAATAGTTaGCCCACCACTTTAATGAATGCCGTGTGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: SSKPARLERTNS*PTTLMNAVWPG
Trigger: GCCGGGCCACACGGCATTCATTAAAGTGGTGGGGCAACTATTGGTGCGCTCCAGCCGGGCAGGTTTTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS GCA 72 bp GAAAGATGCCGCTCCAAGCGGTTCTGTCTCCCTCTGTaGCGCCGCAACTTCCATGGCTATTGCTTCAGGCGG +
Preference number: 6 (lower is better)
Translates to: ERCRSKRFCLPL*RRNFHGYCFRR
Trigger: CCGCCTGAAGCAATAGCCATGGAAGTTGCGGCGGCACAGAGGGAGACAGAACCGCTTGGAGCGGCATCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS GCA 72 bp GTTAGTGGCGCTCTTGGGCTGGCACACCGGTGCTGCTaGGGGAACGGCCACCAAGGAAAGAAAGAAGTCTGT +
Preference number: 6 (lower is better)
Translates to: VSGALGLAHRCC*GNGHQGKKEVC
Trigger: ACAGACTTCTTTCTTTCCTTGGTGGCCGTTCCCGCAGCAGCACCGGTGTGCCAGCCCAAGAGCGCCACTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CCA 72 bp ACCGTCTTCCACTTCATGACGGTCTGCAAGCCCCCTTaGGAGGTGCCTTCCATCCTGGCTACCACTGTGGCT +
Preference number: 6 (lower is better)
Translates to: TVFHFMTVCKPP*EVPSILATTVA
Trigger: AGCCACAGTGGTAGCCAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS CAA 72 bp AGCCTTCGCCGTGTCTCCCGGAACTCAGCCGTGACATaGGCCTTCCACTCTGCCGCATGGGCCTTGATTTCA +
Preference number: 6 (lower is better)
Translates to: SLRRVSRNSAVT*AFHSAAWALIS
Trigger: TGAAATCAAGGCCCATGCGGCAGAGTGGAAGGCCAATGTCACGGCTGAGTTCCGGGAGACACGGCGAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp TTCCTCTTGGTGAGTCTGGAGGTGGACCCGAACTTGTTGATGATGTaGTCCTCGGACGCACCCTGCCCATGCTTGTTCAGCTGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: FLLVSLEVDPNLLMM*SSDAPCPCLFSCSG
Trigger: GCCGGAGCAGCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGGGTCCACCTCCAGACTCACCAAGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp AAGATGGCAACCACCGTCTTCCACTTCATGACGGTCTaGAAGCCCCCTTGGGAGGTGCCTTCCATCCTGGCT +
Preference number: 6 (lower is better)
Translates to: KMATTVFHFMTV*KPPWEVPSILA
Trigger: AGCCAGGATGGAAGGCACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGGTGGTTGCCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS TCA 72 bp CAACCACAAAGATGGCAACCACCGTCTTCCACTTCATaGCGGTCTGCAAGCCCCCTTGGGAGGTGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: QPQRWQPPSSTS*RSASPLGRCLP
Trigger: TGGAAGGCACCTCCCAAGGGGGCTTGCAGACCGTCATGAAGTGGAAGACGGTGGTTGCCATCTTTGTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS GCA 72 bp CTCCCGGAACTCAGCCGTGACATTGGCCTTCCACTCTaGCGCATGGGCCTTGATTTCACCCACCTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: LPELSRDIGLPL*RMGLDFTHLFF
Trigger: AAAGAAGAGGTGGGTGAAATCAAGGCCCATGCGGCAGAGTGGAAGGCCAATGTCACGGCTGAGTTCCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp TCCGTGGGTATCATTCCGTTCTCCAACTCAGCGTGCTaGTGGATACAGTCCGTCAGCATGGCTGTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SVGIIPFSNSAC*WIQSVSMAVLE
Trigger: CTCCAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGAGAACGGAATGATACCCACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp GTGTCCGTGGGTATCATTCCGTTCTCCAACTCAGCGTaGTGCTGGATACAGTCCGTCAGCATGGCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: VSVGIIPFSNSA*CWIQSVSMAVL
Trigger: CAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGAGAACGGAATGATACCCACGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 72 bp GTGAGTCTGGAGGTGGACCCGAACTTGTTGATGATGTaGTCCTCGGACGCACCCTGCCCATGCTTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: VSLEVDPNLLMM*SSDAPCPCLFS
Trigger: GCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGGGTCCACCTCCAGACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 72 bp TTCCTCTTGGTGAGTCTGGAGGTGGACCCGAACTTGTaGATGATGTTGTCCTCGGACGCACCCTGCCCATGC +
Preference number: 6 (lower is better)
Translates to: FLLVSLEVDPNL*MMLSSDAPCPC
Trigger: GCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGGGTCCACCTCCAGACTCACCAAGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS TCA 72 bp AGGGCTGCTCCAATGCCCGGAAGACAAGACCGCCAGTaGCAAGGTAGACCACCACAACCACAAAGATGGCAA +
Preference number: 6 (lower is better)
Translates to: RAAPMPGRQDRQ*QGRPPQPQRWQ
Trigger: TTGCCATCTTTGTGGTTGTGGTGGTCTACCTTGTCACTGGCGGTCTTGTCTTCCGGGCATTGGAGCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS GCA 72 bp AAGGCGATGGTATTCTTCTGGCTGCTCTCAAAGGGCTaGTCCAATGCCCGGAAGACAAGACCGCCAGTGACA +
Preference number: 6 (lower is better)
Translates to: KAMVFFWLLSKG*SNARKTRPPVT
Trigger: TGTCACTGGCGGTCTTGTCTTCCGGGCATTGGAGCAGCCCTTTGAGAGCAGCCAGAAGAATACCATCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS GCA 72 bp TGTCTCCCTCTGTGCCGCCGCAACTTCCATGGCTATTaGTTCAGGCGGGTTAAGTCTGGTGGAAAGAGACTG +
Preference number: 6 (lower is better)
Translates to: CLPLCRRNFHGY*FRRVKSGGKRL
Trigger: CAGTCTCTTTCCACCAGACTTAACCCGCCTGAAGCAATAGCCATGGAAGTTGCGGCGGCACAGAGGGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CCA 72 bp GTGGGTATCATTCCGTTCTCCAACTCAGCGTGCTGCTaGATACAGTCCGTCAGCATGGCTGTGCTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: VGIIPFSNSACC*IQSVSMAVLEL
Trigger: CAACTCCAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTGAGTTGGAGAACGGAATGATACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 72 bp ATGAGTTGTTCTCCGGCTCCCGGTCTTTGGTGTCCGTaGGTATCATTCCGTTCTCCAACTCAGCGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: MSCSPAPGLWCP*VSFRSPTQRAA
Trigger: AGCAGCACGCTGAGTTGGAGAACGGAATGATACCCACGGACACCAAAGACCGGGAGCCGGAGAACAACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 72 bp ACCAATAGTTGCCCCACCACTTTAATGAATGCCGTGTaGCCCGGCATGGGAAGGCTGGGAAAGCCCGAAAAC +
Preference number: 6 (lower is better)
Translates to: TNSCPTTLMNAV*PGMGRLGKPEN
Trigger: GTTTTCGGGCTTTCCCAGCCTTCCCATGCCGGGCCACACGGCATTCATTAAAGTGGTGGGGCAACTATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS GCA 72 bp ATTCCGCCTTCTCCAAGGCGATGGTATTCTTCTGGCTaGTCTCAAAGGGCTGCTCCAATGCCCGGAAGACAA +
Preference number: 6 (lower is better)
Translates to: IPPSPRRWYSSG*SQRAAPMPGRQ
Trigger: TTGTCTTCCGGGCATTGGAGCAGCCCTTTGAGAGCAGCCAGAAGAATACCATCGCCTTGGAGAAGGCGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS CAA 72 bp TTTTTCCTCTTGGTGAGTCTGGAGGTGGACCCGAACTaGTTGATGATGTTGTCCTCGGACGCACCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: FFLLVSLEVDPN*LMMLSSDAPCP
Trigger: TGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGGGTCCACCTCCAGACTCACCAAGAGGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp TCCTTGTTTTTCCTCTTGGTGAGTCTGGAGGTGGACCCGAACTTGTaGATGATGTTGTCCTCGGACGCACCCTGCCCATGCTTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: SLFFLLVSLEVDPNL*MMLSSDAPCPCLFS
Trigger: GCTGAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGGGTCCACCTCCAGACTCACCAAGAGGAAAAACAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 90 bp AGGTCCTTGTTTTTCCTCTTGGTGAGTCTGGAGGTGGACCCGAACTaGTTGATGATGTTGTCCTCGGACGCACCCTGCCCATGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: RSLFFLLVSLEVDPN*LMMLSSDAPCPCLF
Trigger: GAACAAGCATGGGCAGGGTGCGTCCGAGGACAACATCATCAACAAGTTCGGGTCCACCTCCAGACTCACCAAGAGGAAAAACAAGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS GCA 72 bp CAGCGTGCTGCTGGATACAGTCCGTCAGCATGGCTGTaGTGGAGTTGTCTGAGTTACACATCTTTTCCGTCT +
Preference number: 6 (lower is better)
Translates to: QRAAGYSPSAWL*WSCLSYTSFPS
Trigger: AGACGGAAAAGATGTGTAACTCAGACAACTCCAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 72 bp TGGTGTGTCACTCTCTCAGGTGTCAGTGTGATCACATaGACCCTTGCTAACAATGCTCTGAAGGCGCCACCA +
Preference number: 6 (lower is better)
Translates to: WCVTLSGVSVIT*TLANNALKAPP
Trigger: TGGTGGCGCCTTCAGAGCATTGTTAGCAAGGGTCCATGTGATCACACTGACACCTGAGAGAGTGACACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312350.9
CDS GCA 72 bp ATTGCTTCAGGCGGGTTAAGTCTGGTGGAAAGAGACTaGCTAGCGTTCCTGCGGCAGGAAAACAAAACATCG +
Preference number: 6 (lower is better)
Translates to: IASGGLSLVERD*LAFLRQENKTS
Trigger: CGATGTTTTGTTTTCCTGCCGCAGGAACGCTAGGCAGTCTCTTTCCACCAGACTTAACCCGCCTGAAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340700.9
CDS CCA 72 bp GTCCCAGTGGCTGCTGTTGTTGGAAGAGTTTCCTATTaGACTGACTCCCGCATTGTCAGCATCAAGAGCATG +
Preference number: 6 (lower is better)
Translates to: VPVAAVVGRVSY*TDSRIVSIKSM
Trigger: CATGCTCTTGATGCTGACAATGCGGGAGTCAGTCCAATAGGAAACTCTTCCAACAACAGCAGCCACTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS CCA 72 bp AACTCAGCCGTGACATTGGCCTTCCACTCTGCCGCATaGGCCTTGATTTCACCCACCTCTTCTTTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: NSAVTLAFHSAA*ALISPTSSFVF
Trigger: AAAGACAAAAGAAGAGGTGGGTGAAATCAAGGCCCATGCGGCAGAGTGGAAGGCCAATGTCACGGCTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 72 bp CCAACTCAGCGTGCTGCTGGATACAGTCCGTCAGCATaGCTGTGCTGGAGTTGTCTGAGTTACACATCTTTT +
Preference number: 6 (lower is better)
Translates to: PTQRAAGYSPSA*LCWSCLSYTSF
Trigger: AAAAGATGTGTAACTCAGACAACTCCAGCACAGCCATGCTGACGGACTGTATCCAGCAGCACGCTGAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CCA 72 bp CTTCAAGTAATGAGTTGTTCTCCGGCTCCCGGTCTTTaGTGTCCGTGGGTATCATTCCGTTCTCCAACTCAG +
Preference number: 6 (lower is better)
Translates to: LQVMSCSPAPGL*CPWVSFRSPTQ
Trigger: CTGAGTTGGAGAACGGAATGATACCCACGGACACCAAAGACCGGGAGCCGGAGAACAACTCATTACTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 72 bp TGCTGGATACAGTCCGTCAGCATGGCTGTGCTGGAGTaGTCTGAGTTACACATCTTTTCCGTCTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: CWIQSVSMAVLE*SELHIFSVSSS
Trigger: AGAGGAGGAGACGGAAAAGATGTGTAACTCAGACAACTCCAGCACAGCCATGCTGACGGACTGTATCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS TCA 72 bp AGTGGCTGCTGTTGTTGGAAGAGTTTCCTATTGGACTaGCTCCCGCATTGTCAGCATCAAGAGCATGCTGGA +
Preference number: 6 (lower is better)
Translates to: SGCCCWKSFLLD*LPHCQHQEHAG
Trigger: TCCAGCATGCTCTTGATGCTGACAATGCGGGAGTCAGTCCAATAGGAAACTCTTCCAACAACAGCAGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS TCA 72 bp AAACACAATGCAGCCGGCCAAGATGAACAGGATGGTTaGGATGACCCGGATCTTGGTCTGACTCACTTGCTT +
Preference number: 6 (lower is better)
Translates to: KHNAAGQDEQDG*DDPDLGLTHLL
Trigger: AAGCAAGTGAGTCAGACCAAGATCCGGGTCATCTCAACCATCCTGTTCATCTTGGCCGGCTGCATTGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 72 bp TCGGGCAAGGTCTTTTTGAGGTCCTTGTTTTTCCTCTaGGTGAGTCTGGAGGTGGACCCGAACTTGTTGATG +
Preference number: 6 (lower is better)
Translates to: SGKVFLRSLFFL*VSLEVDPNLLM
Trigger: CATCAACAAGTTCGGGTCCACCTCCAGACTCACCAAGAGGAAAAACAAGGACCTCAAAAAGACCTTGCCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 72 bp TCTTCAAGTAATGAGTTGTTCTCCGGCTCCCGGTCTTaGGTGTCCGTGGGTATCATTCCGTTCTCCAACTCA +
Preference number: 6 (lower is better)
Translates to: SSSNELFSGSRS*VSVGIIPFSNS
Trigger: TGAGTTGGAGAACGGAATGATACCCACGGACACCAAAGACCGGGAGCCGGAGAACAACTCATTACTTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS TCA 72 bp GATACAGTCCGTCAGCATGGCTGTGCTGGAGTTGTCTaGGTTACACATCTTTTCCGTCTCCTCCTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: DTVRQHGCAGVV*VTHLFRLLLFL
Trigger: AAGAAAGAGGAGGAGACGGAAAAGATGTGTAACTCAGACAACTCCAGCACAGCCATGCTGACGGACTGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
CDS CAA 72 bp TTGTTGGAAGAGTTTCCTATTGGACTGACTCCCGCATaGTCAGCATCAAGAGCATGCTGGATCAACGTCTCC +
Preference number: 6 (lower is better)
Translates to: LLEEFPIGLTPA*SASRACWINVS
Trigger: GGAGACGTTGATCCAGCATGCTCTTGATGCTGACAATGCGGGAGTCAGTCCAATAGGAAACTCTTCCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9
ENST00000556282.1
CDS CCA 72 bp AACGGCCACTTTAGGATCCCAGTTCACCTGTTTTCTTaGCGTCTCGATTGGAAATTTCATTGCTTCGTTGCC +
Preference number: 6 (lower is better)
Translates to: NGHFRIPVHLFS*RLDWKFHCFVA
Trigger: GGCAACGAAGCAATGAAATTTCCAATCGAGACGCCAAGAAAACAGGTGAACTGGGATCCTAAAGTGGCCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319231.10
CDS CCA 72 bp AGACCTTCTCCACTCTTGCAATGCTTTTCCCAAAGATaGTTCCAAGTTGGTCTCCAATTCCAGCCAATAAGA +
Preference number: 6 (lower is better)
Translates to: RPSPLLQCFSQR*FQVGLQFQPIR
Trigger: TCTTATTGGCTGGAATTGGAGACCAACTTGGAACCATCTTTGGGAAAAGCATTGCAAGAGTGGAGAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312350.9
ENST00000319231.10
ENST00000340700.9