RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNJ9 (Homo sapiens)

Ensembl gene IDs: ENSG00000162728

Ensembl transcript IDs: ENST00000368088.4

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGGATGTGGCCAGGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTaGTGCTGTGTGGGAGACAGGCGCTGTCCCAGGGCAGGCTCTCCT +
Preference number: 1 (lower is better)
Translates to: VGCGQGQGRRSLLGQ*CCVGDRRCPRAGSP
Trigger: AGGAGAGCCTGCCCTGGGACAGCGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCCTGGCCACATCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 90 bp GAAGACTGGAGTGCTTTCCCCAGGGGGCTTATGAAAGGGCAGGAGTaGGATGTGGCCAGGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: EDWSAFPRGLMKGQE*DVARAKGGGPCWAS
Trigger: ACTGGCCCAGCAAGGACCTCCTCCCTTGGCCCTGGCCACATCCCACTCCTGCCCTTTCATAAGCCCCCTGGGGAAAGCACTCCAGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR TCA 90 bp GCCGCTGGTGACTGGGATGTGATCAGGAAGCAGGTGGAGGTGGGGTaGGAATATGCGTCTTTGGGACCCCCTGGCCCAATTGGGCTGACA +
Preference number: 1 (lower is better)
Translates to: AAGDWDVIRKQVEVG*EYASLGPPGPIGLT
Trigger: TGTCAGCCCAATTGGGCCAGGGGGTCCCAAAGACGCATATTCTCACCCCACCTCCACCTGCTTCCTGATCACATCCCAGTCACCAGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 90 bp GAGCCCCCTCAAGTCCTTCTGATGGCTTCATCTCTCTGTCGGGCCTaGTCAGCTTCCAGACACCCCCTCCACTTGTCACTGCCCTGTTTC +
Preference number: 1 (lower is better)
Translates to: EPPQVLLMASSLCRA*SASRHPLHLSLPCF
Trigger: GAAACAGGGCAGTGACAAGTGGAGGGGGTGTCTGGAAGCTGAGCAGGCCCGACAGAGAGATGAAGCCATCAGAAGGACTTGAGGGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 90 bp CCAGGCCAGCTTCAGGTCCCTTCCACCCCTCTGCCTCTCTCAACTTaGAGTTGTTCTCCCTCACTATCCAGGAAGCTGCCGCTGGTGACT +
Preference number: 1 (lower is better)
Translates to: PGQLQVPSTPLPLST*SCSPSLSRKLPLVT
Trigger: AGTCACCAGCGGCAGCTTCCTGGATAGTGAGGGAGAACAACTGCAAGTTGAGAGAGGCAGAGGGGTGGAAGGGACCTGAAGCTGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 90 bp CCCATAGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTaGTTTCCCCAGGGGGCTTATGAAAGGGCAGGAGTGGGATGTGGC +
Preference number: 1 (lower is better)
Translates to: PIGPYLPSLEQRRLE*FPQGAYERAGVGCG
Trigger: GCCACATCCCACTCCTGCCCTTTCATAAGCCCCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCTATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 90 bp GAAGCAGGTGGAGGTGGGGTGAGAATATGCGTCTTTGGGACCCCCTaGCCCAATTGGGCTGACAGCAGGCTGCAGACACATCCAGATGTT +
Preference number: 1 (lower is better)
Translates to: EAGGGGVRICVFGTP*PNWADSRLQTHPDV
Trigger: AACATCTGGATGTGTCTGCAGCCTGCTGTCAGCCCAATTGGGCCAGGGGGTCCCAAAGACGCATATTCTCACCCCACCTCCACCTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR TCA 90 bp TGGGGTGAGAATATGCGTCTTTGGGACCCCCTGGCCCAATTGGGCTaGCAGCAGGCTGCAGACACATCCAGATGTTCTAACTCCTATCGC +
Preference number: 1 (lower is better)
Translates to: WGENMRLWDPLAQLG*QQAADTSRCSNSYR
Trigger: GCGATAGGAGTTAGAACATCTGGATGTGTCTGCAGCCTGCTGTCAGCCCAATTGGGCCAGGGGGTCCCAAAGACGCATATTCTCACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 90 bp TTAGACAGTTGTGCCATATGTGGGGAGGCTGGCAGAAGAGGTGACTaGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCAC +
Preference number: 1 (lower is better)
Translates to: LDSCAICGEAGRRGD*GLQSILYSAPQAMH
Trigger: GTGCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCCAGCCTCCCCACATATGGCACAACTGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 90 bp TCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCAGCTTaGCCTACCGTGTCATTAGACAGTTGTGCCATATGTGGGGAGGCT +
Preference number: 1 (lower is better)
Translates to: SCAHLGPAPFSFTSA*PTVSLDSCAICGEA
Trigger: AGCCTCCCCACATATGGCACAACTGTCTAATGACACGGTAGGCCAAGCTGAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 90 bp AGGTTCTCAAAGTGTGGTCCTCAGTCCAGCAACAGCAGCATGACCTaGGGACTTCTTAGGAATGCATGGTTTTGGTCCCCACCTCTTGGG +
Preference number: 1 (lower is better)
Translates to: RFSKCGPQSSNSSMT*GLLRNAWFWSPPLG
Trigger: CCCAAGAGGTGGGGACCAAAACCATGCATTCCTAAGAAGTCCCCAGGTCATGCTGCTGTTGCTGGACTGAGGACCACACTTTGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR TCA 90 bp ACCCACACTCCCCTACCCTCCACGGGACTGCACAGGTTGTCAGTTTaGATTATCCCTCGTTCAGTCACCACAGGTAGATTCCTCTGTTTT +
Preference number: 1 (lower is better)
Translates to: THTPLPSTGLHRLSV*IIPRSVTTGRFLCF
Trigger: AAAACAGAGGAATCTACCTGTGGTGACTGAACGAGGGATAATTCAAACTGACAACCTGTGCAGTCCCGTGGAGGGTAGGGGAGTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 90 bp CCATTGATGGTTGAGTTTCTGGGCCCAAAGTTAAACTCTTCAGCCTaGGCTTCGGGTCCCTTTCCCACACATAAAACCCCACCCTTCACA +
Preference number: 1 (lower is better)
Translates to: PLMVEFLGPKLNSSA*ASGPFPTHKTPPFT
Trigger: TGTGAAGGGTGGGGTTTTATGTGTGGGAAAGGGACCCGAAGCCCAGGCTGAAGAGTTTAACTTTGGGCCCAGAAACTCAACCATCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 90 bp GTGTTCTACAGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTaGTCCATCTATGTATCTGTCAGCTGTCTTTATCTGCTACCATCT +
Preference number: 1 (lower is better)
Translates to: VFYRLVAALSGPVVY*SIYVSVSCLYLLPS
Trigger: AGATGGTAGCAGATAAAGACAGCTGACAGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCTGTAGAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 90 bp AAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTaGAGATTTCTAACTCCTGACTTACATATTCCCTATGCCTTACAC +
Preference number: 1 (lower is better)
Translates to: KICVLPSPPGDSNAH*RFLTPDLHIPYALH
Trigger: GTGTAAGGCATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR TCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGCTGGCCCAATTGGGCTaGCAGCAGGCTGCAGACACA +
Preference number: 2 (lower is better)
Translates to: GPREEVLAGPVLLCGRQALAQLG*QQAADT
Trigger: TGTGTCTGCAGCCTGCTGTCAGCCCAATTGGGCCAG...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR TCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGTCATTCACACCTTGCTaGGCCCCTTGCACGCCTTCA +
Preference number: 2 (lower is better)
Translates to: GPREEVLAGPVLLCGRQASFTPC*APCTPS
Trigger: TGAAGGCGTGCAAGGGGCTCAGCAAGGTGTGAATGA...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGAGTGGCAGCCCTGAGTaGACCAGTTGTCTACTGGTC +
Preference number: 2 (lower is better)
Translates to: GPREEVLAGPVLLCGRQASGSPE*TSCLLV
Trigger: GACCAGTAGACAACTGGTCCACTCAGGGCTGCCACT...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGCTCATGTGCCCATCTTaGTCCGGCTCCTTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: GPREEVLAGPVLLCGRQALMCPS*SGSFLL
Trigger: AAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAG...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGGGAAGCAGGTGGAGGTaGGGTGAGAATATGCGTCTT +
Preference number: 2 (lower is better)
Translates to: GPREEVLAGPVLLCGRQAGSRWR*GENMRL
Trigger: AAGACGCATATTCTCACCCCACCTCCACCTGCTTCC...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR TCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGCAGGAACCAGGTTTTTaGATGTCCACTCCACATGGC +
Preference number: 2 (lower is better)
Translates to: GPREEVLAGPVLLCGRQAQEPGF*MSTPHG
Trigger: GCCATGTGGAGTGGACATTCAAAAACCTGGTTCCTG...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR GCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGTCTCTCTGTCGGGCCTaGTCAGCTTCCAGACACCCC +
Preference number: 2 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGSLCRA*SASRHP
Trigger: GGGGTGTCTGGAAGCTGAGCAGGCCCGACAGAGAGA...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 90 bp TCCAGGCCAGCTTCAGGTCCCTTCCACCCCTCTGCCTCTCTCAACTaGCAGTTGTTCTCCCTCACTATCCAGGAAGCTGCCGCTGGTGAC +
Preference number: 2 (lower is better)
Translates to: SRPASGPFHPSASLN*QLFSLTIQEAAAGD
Trigger: GTCACCAGCGGCAGCTTCCTGGATAGTGAGGGAGAACAACTGCAAGTTGAGAGAGGCAGAGGGGTGGAAGGGACCTGAAGCTGGCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR TCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGCACAGGTTGTCAGTTTaGATTATCCCTCGTTCAGTC +
Preference number: 2 (lower is better)
Translates to: GPREEVLAGPVLLCGRQAHRLSV*IIPRSV
Trigger: GACTGAACGAGGGATAATTCAAACTGACAACCTGTG...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 90 bp GCTCTGCCTGCTTCCCTGAACTTGCGGACTAAGGTCATTCACACCTaGCTGAGCCCCTTGCACGCCTTCATCCTGGTGAGGGTGGAGCTA +
Preference number: 2 (lower is better)
Translates to: ALPASLNLRTKVIHT*LSPLHAFILVRVEL
Trigger: TAGCTCCACCCTCACCAGGATGAAGGCGTGCAAGGGGCTCAGCAAGGTGTGAATGACCTTAGTCCGCAAGTTCAGGGAAGCAGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 90 bp CCAGCTTCAGGTCCCTTCCACCCCTCTGCCTCTCTCAACTTGCAGTaGTTCTCCCTCACTATCCAGGAAGCTGCCGCTGGTGACTGGGAT +
Preference number: 2 (lower is better)
Translates to: PASGPFHPSASLNLQ*FSLTIQEAAAGDWD
Trigger: ATCCCAGTCACCAGCGGCAGCTTCCTGGATAGTGAGGGAGAACAACTGCAAGTTGAGAGAGGCAGAGGGGTGGAAGGGACCTGAAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGGAGAATATGCGTCTTTaGGACCCCCTGGCCCAATTG +
Preference number: 2 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGENMRL*DPLAQL
Trigger: CAATTGGGCCAGGGGGTCCCAAAGACGCATATTCTC...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR TCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCACTGGCCCCAGCCTTCTaGTCACCCACACTCCCCTAC +
Preference number: 2 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPLAPAF*SPTLPY
Trigger: GTAGGGGAGTGTGGGTGATCAGAAGGCTGGGGCCAG...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR GCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGGTCATTAGACAGTTGTaGCATATGTGGGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGVIRQL*HMWGGW
Trigger: CCAGCCTCCCCACATATGGCACAACTGTCTAATGAC...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR GCA 90 bp TCTTTGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGGCAAAGATATCCGTGTCATGGCCCCCTTTCTTaGTTCCAGAGGACCCATAGG +
Preference number: 2 (lower is better)
Translates to: SLMTGPQWPCDLRQRYPCHGPLS*FQRTHR
Trigger: CCTATGGGTCCTCTGGAAGCAAGAAAGGGGGCCATG...ACACGGATATCTTTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCAGGTCAAACACAGACTaGCATTTTCACCCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: GRRGDWGLQSILYSAPQARSNTD*HFHPAP
Trigger: TGGGGCCGGGTGAAAATGCCAGTCTGTGTTTGACCT...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 90 bp CTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCAGCTaGGCCTACCGTGTCATTAGACAGTTGTGCCATATGTGGGGAGGC +
Preference number: 2 (lower is better)
Translates to: LMCPSWSGSFLLHFS*AYRVIRQLCHMWGG
Trigger: GCCTCCCCACATATGGCACAACTGTCTAATGACACGGTAGGCCAAGCTGAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp TCTTTGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGGCAAAGATATCCGTGTCTAGACTTGAGGTTCTaGGGGACGGGGACTTTCCAA +
Preference number: 2 (lower is better)
Translates to: SLMTGPQWPCDLRQRYPCLDLRF*GTGTFQ
Trigger: TTGGAAAGTCCCCGTCCCCCAGAACCTCAAGTCTAG...ACACGGATATCTTTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGGGGGCTGTATCTGTCTaGAGGAAAAGGGTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGGAVSV*RKRVPF
Trigger: AAAAGGAACCCTTTTCCTCCAGACAGATACAGCCCC...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 90 bp CTCAGCTTCCAGACACCCCCTCCACTTGTCACTGCCCTGTTTCCATaGATGGTTGAGTTTCTGGGCCCAAAGTTAAACTCTTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LSFQTPPPLVTALFP*MVEFLGPKLNSSAW
Trigger: CCAGGCTGAAGAGTTTAACTTTGGGCCCAGAAACTCAACCATCAATGGAAACAGGGCAGTGACAAGTGGAGGGGGTGTCTGGAAGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR GCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGTCAGCTGTCTTTATCTaGTACCATCTTCCCATCCAA +
Preference number: 2 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGSAVFI*YHLPIQ
Trigger: TTGGATGGGAAGATGGTAGCAGATAAAGACAGCTGA...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGACAGTTGTGCCATATGTaGGGAGGCTGGCAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGQLCHM*GGWQKR
Trigger: CCTCTTCTGCCAGCCTCCCCACATATGGCACAACTG...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGCCCTATGCCTTACACTaGCCCCAGCCTTCTGATCAC +
Preference number: 2 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVPYALH*PQPSDH
Trigger: GTGATCAGAAGGCTGGGGCCAGTGTAAGGCATAGGG...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR GCA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATCCTCCCCGCTCTGCCTaGTTCCCTGAACTTGCGGAC +
Preference number: 2 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYPPRSA*FPELAD
Trigger: GTCCGCAAGTTCAGGGAAGCAGGCAGAGCGGGGAGG...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR GCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGAGGTGACTGGGGACTaGAATCCATCCTATACTCTG +
Preference number: 2 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPEVTGD*NPSYTL
Trigger: CAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTC...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGACCCTCCCTTCCATACTaGTTTCTAGACTTGAGGTTC +
Preference number: 2 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGPSLPY*FLDLRF
Trigger: GAACCTCAAGTCTAGAAACCAGTATGGAAGGGAGGG...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGATCCTTCACTTCAGCTTaGCCTACCGTGTCATTAGAC +
Preference number: 2 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGSFTSA*PTVSLD
Trigger: GTCTAATGACACGGTAGGCCAAGCTGAAGTGAAGGA...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGAGGACCAGTTGTCTACTaGTCCATCTATGTATCTGTC +
Preference number: 2 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGGPVVY*SIYVSV
Trigger: GACAGATACATAGATGGACCAGTAGACAACTGGTCC...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CCA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATCCAAGCCATGCACCCTaGTTTGGGGCTGTATCTGTC +
Preference number: 2 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYPSHAP*FGAVSV
Trigger: GACAGATACAGCCCCAAACCAGGGTGCATGGCTTGG...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR GCA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATCCACCACCTCCGATATaGAGTTCCCCATGTATCTGT +
Preference number: 2 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYPPPPI*SSPCIC
Trigger: ACAGATACATGGGGAACTGCATATCGGAGGTGGTGG...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 72 bp GAGTGGGATGTGGCCAGGGCCAAGGGAGGAGGTCCTTaGTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGCT +
Preference number: 3 (lower is better)
Translates to: EWDVARAKGGGP*WASAAVWETGA
Trigger: AGCGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCCTGGCCACATCCCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CAA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGCCTCATGTGCCCATCTaGGTCCGGCTCCTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: GPREEVLAGPVLLCGRQAPHVPI*VRLLSP
Trigger: AGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGG...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 72 bp ACAGGCGCTGTCCCAGGGCAGGCTCTCCTGGGCCTATaGTTTTCTCCAGGCCAGCTTCAGGTCCCTTCCACC +
Preference number: 3 (lower is better)
Translates to: TGAVPGQALLGL*FSPGQLQVPST
Trigger: GGTGGAAGGGACCTGAAGCTGGCCTGGAGAAAAGCATAGGCCCAGGAGAGCCTGCCCTGGGACAGCGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CAA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGTCTGCCTCTCTCAACTaGCAGTTGTTCTCCCTCACT +
Preference number: 3 (lower is better)
Translates to: GPREEVLAGPVLLCGRQASASLN*QLFSLT
Trigger: AGTGAGGGAGAACAACTGCAAGTTGAGAGAGGCAGA...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 72 bp CTTCCTCCTCCTCCTCCTCCTCCACCACCTCCGATATaGAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTC +
Preference number: 3 (lower is better)
Translates to: LPPPPPPPPPPI*SSPCICVWPPV
Trigger: GACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CAA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCGCCATGCACCCTGGTTaGGGGCTGTATCTGTCTGGA +
Preference number: 3 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFAMHPG*GLYLSG
Trigger: TCCAGACAGATACAGCCCCAAACCAGGGTGCATGGC...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CAA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGGCACAGGTTGTCAGTTaGAATTATCCCTCGTTCAGT +
Preference number: 3 (lower is better)
Translates to: GPREEVLAGPVLLCGRQAAQVVS*NYPSFS
Trigger: ACTGAACGAGGGATAATTCAAACTGACAACCTGTGC...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR TCA 72 bp ACATATTCCCTATGCCTTACACTGGCCCCAGCCTTCTaGTCACCCACACTCCCCTACCCTCCACGGGACTGC +
Preference number: 3 (lower is better)
Translates to: TYSLCLTLAPAF*SPTLPYPPRDC
Trigger: GCAGTCCCGTGGAGGGTAGGGGAGTGTGGGTGATCAGAAGGCTGGGGCCAGTGTAAGGCATAGGGAATATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp CTGCAATGGGTTGGCTCCTGTGTGAGTGCGTGTGTGTaGATACCAAGTAGCCCACCCGCTCTTGTCCAGACC +
Preference number: 3 (lower is better)
Translates to: LQWVGSCVSACV*IPSSPPALVQT
Trigger: GGTCTGGACAAGAGCGGGTGGGCTACTTGGTATCCACACACACGCACTCACACAGGAGCCAACCCATTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 72 bp CAAGTCCTTCTGATGGCTTCATCTCTCTGTCGGGCCTaGTCAGCTTCCAGACACCCCCTCCACTTGTCACTG +
Preference number: 3 (lower is better)
Translates to: QVLLMASSLCRA*SASRHPLHLSL
Trigger: CAGTGACAAGTGGAGGGGGTGTCTGGAAGCTGAGCAGGCCCGACAGAGAGATGAAGCCATCAGAAGGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 72 bp CTTCAGGTCCCTTCCACCCCTCTGCCTCTCTCAACTTaGAGTTGTTCTCCCTCACTATCCAGGAAGCTGCCG +
Preference number: 3 (lower is better)
Translates to: LQVPSTPLPLST*SCSPSLSRKLP
Trigger: CGGCAGCTTCCTGGATAGTGAGGGAGAACAACTGCAAGTTGAGAGAGGCAGAGGGGTGGAAGGGACCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR TCA 72 bp CAGTTGTGCCATATGTGGGGAGGCTGGCAGAAGAGGTaGCTGGGGACTGCAATCCATCCTATACTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: QLCHMWGGWQKR*LGTAIHPILCS
Trigger: GGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCCAGCCTCCCCACATATGGCACAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp TGTGCCATATGTGGGGAGGCTGGCAGAAGAGGTGACTaGGGACTGCAATCCATCCTATACTCTGCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: CAICGEAGRRGD*GLQSILYSAPQ
Trigger: TTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCCAGCCTCCCCACATATGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR TCA 72 bp AATATGCGTCTTTGGGACCCCCTGGCCCAATTGGGCTaGCAGCAGGCTGCAGACACATCCAGATGTTCTAAC +
Preference number: 3 (lower is better)
Translates to: NMRLWDPLAQLG*QQAADTSRCSN
Trigger: GTTAGAACATCTGGATGTGTCTGCAGCCTGCTGTCAGCCCAATTGGGCCAGGGGGTCCCAAAGACGCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 72 bp GACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATaGACCCTGGTTTGGGGCTGTATCTGTCTGGAGGAA +
Preference number: 3 (lower is better)
Translates to: DCNPSYTLLPKP*TLVWGCICLEE
Trigger: TTCCTCCAGACAGATACAGCCCCAAACCAGGGTGCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CAA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAACATTTCCAGGGGCTTaGCCTTCCTCCTCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPTFPGA*PSSSSS
Trigger: GGAGGAGGAGGAGGAAGGCAAAGCCCCTGGAAATGT...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR TCA 72 bp CCCCTACCCTCCACGGGACTGCACAGGTTGTCAGTTTaGATTATCCCTCGTTCAGTCACCACAGGTAGATTC +
Preference number: 3 (lower is better)
Translates to: PLPSTGLHRLSV*IIPRSVTTGRF
Trigger: GAATCTACCTGTGGTGACTGAACGAGGGATAATTCAAACTGACAACCTGTGCAGTCCCGTGGAGGGTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR TCA 72 bp CCCTGTGACCTGAGGCAAAGATATCCGTGTTTTGACTaGAAGGAAGGGACTGGGACTTGGGTCCTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: PCDLRQRYPCFD*KEGTGTWVLSE
Trigger: CTCAGAGAGGACCCAAGTCCCAGTCCCTTCCTTTCAGTCAAAACACGGATATCTTTGCCTCAGGTCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp CTAACTCCTGACTTACATATTCCCTATGCCTTACACTaGCCCCAGCCTTCTGATCACCCACACTCCCCTACC +
Preference number: 3 (lower is better)
Translates to: LTPDLHIPYALH*PQPSDHPHSPT
Trigger: GGTAGGGGAGTGTGGGTGATCAGAAGGCTGGGGCCAGTGTAAGGCATAGGGAATATGTAAGTCAGGAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp AAGTGTGGTCCTCAGTCCAGCAACAGCAGCATGACCTaGGGACTTCTTAGGAATGCATGGTTTTGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: KCGPQSSNSSMT*GLLRNAWFWSP
Trigger: TGGGGACCAAAACCATGCATTCCTAAGAAGTCCCCAGGTCATGCTGCTGTTGCTGGACTGAGGACCACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR-3UTR CAA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGATACTGGTTTCTAGACTaGAGGTTCTGGGGGACGGGG +
Preference number: 3 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGYWFLD*RFWGTG
Trigger: CCCCGTCCCCCAGAACCTCAAGTCTAGAAACCAGTA...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp CACAGGGGTGTTCTACAGGTTAGTGGCAGCCCTGAGTaGACCAGTTGTCTACTGGTCCATCTATGTATCTGT +
Preference number: 3 (lower is better)
Translates to: HRGVLQVSGSPE*TSCLLVHLCIC
Trigger: ACAGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCTGTAGAACACCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp TCCAAGTATTCACTTAGAGCACAGGTTCTCAAAGTGTaGTCCTCAGTCCAGCAACAGCAGCATGACCTGGGG +
Preference number: 3 (lower is better)
Translates to: SKYSLRAQVLKV*SSVQQQQHDLG
Trigger: CCCCAGGTCATGCTGCTGTTGCTGGACTGAGGACCACACTTTGAGAACCTGTGCTCTAAGTGAATACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp GTTGAGTTTCTGGGCCCAAAGTTAAACTCTTCAGCCTaGGCTTCGGGTCCCTTTCCCACACATAAAACCCCA +
Preference number: 3 (lower is better)
Translates to: VEFLGPKLNSSA*ASGPFPTHKTP
Trigger: TGGGGTTTTATGTGTGGGAAAGGGACCCGAAGCCCAGGCTGAAGAGTTTAACTTTGGGCCCAGAAACTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR TCA 72 bp TCTCAAAGTGTGGTCCTCAGTCCAGCAACAGCAGCATaGCCTGGGGACTTCTTAGGAATGCATGGTTTTGGT +
Preference number: 3 (lower is better)
Translates to: SQSVVLSPATAA*PGDFLGMHGFG
Trigger: ACCAAAACCATGCATTCCTAAGAAGTCCCCAGGTCATGCTGCTGTTGCTGGACTGAGGACCACACTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR GCA 72 bp CCACACATAAAACCCCACCCTTCACATTTCTCTGTCTaGTCCTGTGAGGATCCTCAGCTTCTTCTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: PHIKPHPSHFSV*SCEDPQLLLSF
Trigger: GAAGCTGAGAAGAAGCTGAGGATCCTCACAGGAGCAGACAGAGAAATGTGAAGGGTGGGGTTTTATGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp CATCTTGGTCCGGCTCCTTTCTCCTTCACTTCAGCTTaGCCTACCGTGTCATTAGACAGTTGTGCCATATGT +
Preference number: 3 (lower is better)
Translates to: HLGPAPFSFTSA*PTVSLDSCAIC
Trigger: ACATATGGCACAACTGTCTAATGACACGGTAGGCCAAGCTGAAGTGAAGGAGAAAGGAGCCGGACCAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp AGGACAGGAACCAGGTTTTTGAATGTCCACTCCACATaGCACCCAATCAGTGATGTGAATGACTGTGCCCCA +
Preference number: 3 (lower is better)
Translates to: RTGTRFLNVHST*HPISDVNDCAP
Trigger: TGGGGCACAGTCATTCACATCACTGATTGGGTGCCATGTGGAGTGGACATTCAAAAACCTGGTTCCTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp AGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTaGTCCATCTATGTATCTGTCAGCTGTCTTTATCTG +
Preference number: 3 (lower is better)
Translates to: RLVAALSGPVVY*SIYVSVSCLYL
Trigger: CAGATAAAGACAGCTGACAGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CCA 72 bp GTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTaGAGATTTCTAACTCCTGACTTACATATTCCCTAT +
Preference number: 3 (lower is better)
Translates to: VLPSPPGDSNAH*RFLTPDLHIPY
Trigger: ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGCGCACGTTGCCCTGCTaGACGTTGCACCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GPREEVLAGPVLLCGRQARTLPC*TLHRPS
Trigger: GGATGGCCGGTGCAACGTGCAGCAGGGCAACGTGCG...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCGCGGTGTCCTCCAGGTaGTCCAGGTCGCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAAVSSR*SRSPRP
Trigger: CGGCCGCGGCGACCTGGAGCACCTGGAGGACACCGC...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGCGGCGTCGGGGGTCCTaGAGGGGAGCACGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGRRRGS*RGARGE
Trigger: CTCTCCACGTGCTCCCCTCCAGGACCCCCGACGCCG...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCAAGGCCGCGTTCTCCTaGGCCATGGCGGCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFKAAFS*AMAAAS
Trigger: TGACGCGGCCGCCATGGCGCAGGAGAACGCGGCCTT...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp CACATTTCCAGGGGCTTTGCCTTCCTCCTCCTCCTCCTCCTCCACCACCTCCGACTGGCCCCAGCCTTCTaGTCACCCACACTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: HISRGFAFLLLLLLHHLRLAPAF*SPTLPY
Trigger: GTAGGGGAGTGTGGGTGATCAGAAGGCTGGGGCCAG...TCGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAAGGCAAAGCCCCTGGAAATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCGCGGGCGGCAGCCTCTaGCAGCTCTCGAGCACTGCA +
Preference number: 4 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAAGGSL*QLSSTA
Trigger: TGCAGTGCTCGAGAGCTGGCAGAGGCTGCCGCCCGC...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGTCCCTTCCACCCCTCTaGCTCTCTCAACTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: GPREEVLAGPVLLCGRQASLPPL*LSQLAV
Trigger: AACTGCAAGTTGAGAGAGGCAGAGGGGTGGAAGGGA...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCATCGCCCTCCAGCGTCTaGCGCGAGCGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPSPSSV*RERMSL
Trigger: CAAGCTCATCCGCTCGCGCCAGACGCTGGAGGGCGA...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp CACATTTCCAGGGGCTTTGCCTTCCTCCTCCTCCTCCTCCTCCACCACCTCCGAACCCCCTGGCCCAATTaGGCTGACAGCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HISRGFAFLLLLLLHHLRTPWPN*ADSRLQ
Trigger: CTGCAGCCTGCTGTCAGCCCAATTGGGCCAGGGGGT...TCGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAAGGCAAAGCCCCTGGAAATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCGGCAGGAGTGGGATGTaGCCAGGGCCAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFGRSGM*PGPREE
Trigger: CTCCTCCCTTGGCCCTGGCCACATCCCACTCCTGCC...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCAGGCCTCCACTATGTGTaGGGAGCGCAAGTCGCCCAC +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPGLHYV*GAQVAH
Trigger: GTGGGCGACTTGCGCTCCTCACACATAGTGGAGGCC...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCACTCCAGAGTCAGCACTaGCGTGAAGCGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPLQSQH*REAVAP
Trigger: TGGGGCCACCGCTTCACGTCAGTGCTGACTCTGGAG...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp CACATTTCCAGGGGCTTTGCCTTCCTCCTCCTCCTCCTCCTCCACCACCTCCGATCTCTCTGTCGGGCCTaGTCAGCTTCCAGACACCCC +
Preference number: 4 (lower is better)
Translates to: HISRGFAFLLLLLLHHLRSLCRA*SASRHP
Trigger: GGGGTGTCTGGAAGCTGAGCAGGCCCGACAGAGAGA...TCGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAAGGCAAAGCCCCTGGAAATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGGCGGCGTCGATCTCGTaGCTGATAACCAGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGAASIS*LITSGE
Trigger: CTCGCCGCTGGTTATCAGCCACGAGATCGACGCCGC...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 72 bp CTCAGGCACCTCCCCGCTCTGCCTGCTTCCCTGAACTaGCGGACTAAGGTCATTCACACCTTGCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LRHLPALPASLN*RTKVIHTLLSP
Trigger: GGGGCTCAGCAAGGTGTGAATGACCTTAGTCCGCAAGTTCAGGGAAGCAGGCAGAGCGGGGAGGTGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTATGTATCTCGCCCACGCGGAACATaGGGCAGAGGCGCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: RLVAALSGPVVYWSIYVSRPRGT*GRGARR
Trigger: GCGACGGGCGCCTCTGCCTCATGTTCCGCGTGGGCG...AGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCGAGTCAGCACTGACGTaGAGCGGTGGCCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGESALT*SGGPTA
Trigger: TGCTGTGGGGCCACCGCTTCACGTCAGTGCTGACTC...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCGTGGCAGGGTCTCAGTaGCTTCAGCAGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAVAGSQ*LQQAGG
Trigger: CCCTCCTGCCTGCTGAAGTCACTGAGACCCTGCCAC...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCAGCGACACCACGGCGTaGGAGGAGAAGACGAGCGTG +
Preference number: 4 (lower is better)
Translates to: GRRGDWGLQSILYSAPQASDTTA*EEKTSV
Trigger: CACGCTCGTCTTCTCCTCGCACGCCGTGGTGTCGCT...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGCGATCAGCCACCAGATaGCGCCGAAGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGRSATR*RRRRAR
Trigger: CCTGGCTCTTCTTCGGCGCCATCTGGTGGCTGATCG...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCCCAGCCGGCTGGGGATaGACCAGTAGAGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFPAGWG*TSRDGH
Trigger: ATGCCCATCTCTACTGGTCCATCCCCAGCCGGCTGG...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCACTCACTCTCTGGGGGTaGCAGGCAGCCATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPLTLWG*QAAILL
Trigger: GAGCAGAATGGCTGCCTGCCACCCCCAGAGAGTGAG...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGAACAGCAGCATGACCTaGGGACTTCTTAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: GPREEVLAGPVLLCGRQANSSMT*GLLRNA
Trigger: TGCATTCCTAAGAAGTCCCCAGGTCATGCTGCTGTT...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCTGGGTCCTCTCTGAGTaGACCCCAGCTGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGWVLSE*TPAVWA
Trigger: AGCCCAGACAGCTGGGGTTCACTCAGAGAGGACCCA...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCTGCCCTGCTGCACGTTaGACCGGCCATCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGCPAAR*TGHPSP
Trigger: TGGAGAAGGATGGCCGGTGCAACGTGCAGCAGGGCA...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCAGCTCTCGAGCACTaGACGAAGGTGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGPALEH*TKVWAP
Trigger: AGGTGCCCACACCTTCGTGCAGTGCTCGAGAGCTGG...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGGGTGGGGTGAGAATATaGGTCTTTGGGACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGGGVRI*VFGTPW
Trigger: CCAGGGGGTCCCAAAGACGCATATTCTCACCCCACC...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCCCCAGCTGTCTGGGCTaGTTCCATGGCCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAPSCLG*FHGPLS
Trigger: AGAAAGGGGGCCATGGAAGCAGCCCAGACAGCTGGG...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGCGTTCTCCTGCGCCATaGCGGCCGCGTCAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVRSPAP*RPRQGE
Trigger: CTCGCCCTGACGCGGCCGCCATGGCGCAGGAGAACG...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGGGCATGTCATTCCCGTaGCTTCCACCATGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGGMSFP*LPPCPR
Trigger: TCGAGGGCATGGTGGAAGCCACGGGAATGACATGCC...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCCTTGGACTCACTCTCTaGGGGTGGCAGGCAGCCATT +
Preference number: 4 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFLGLTL*GWQAAI
Trigger: AATGGCTGCCTGCCACCCCCAGAGAGTGAGTCCAAG...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCGTCTTTGGGACCCCCTaGCCCAATTGGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAVFGTP*PNWADS
Trigger: GCTGTCAGCCCAATTGGGCCAGGGGGTCCCAAAGAC...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCATGCCCATAGGACCCTaGCTGTGCCCCATAGGACCC +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGMPIGP*LCPIGP
Trigger: GGGTCCTATGGGGCACAGCCAGGGTCCTATGGGCAT...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp TCTTTGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGGCAAAGATATCCGTGTCGAAGAACAACAGGCTaGGGCGCCACTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLMTGPQWPCDLRQRYPCRRTTG*GATAGP
Trigger: TGGACCTGCAGTGGCGCCTCAGCCTGTTGTTCTTCG...ACACGGATATCTTTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCACATGCAGCCCACCATaGAGGCGTTCACCATGGAGC +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGTCSPP*RRSPWS
Trigger: GCTCCATGGTGAACGCCTTCATGGTGGGCTGCATGT...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCTGGGCTGCGAGATCTTaGCGAACATGCAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGWAARS*RTCSPP
Trigger: TGGTGGGCTGCATGTTCGTCAAGATCTCGCAGCCCA...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCATGTCTCGCGCACGTTaGCCTGCTGCACGTTGCACC +
Preference number: 4 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCMSRAR*PAARCT
Trigger: GGTGCAACGTGCAGCAGGGCAACGTGCGCGAGACAT...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GTTCTACAGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTAGTCTGGCCCCCGGTCTaGCACAGGGGTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VLQVSGSPEWTSCLLVHLVWPPV*HRGLEE
Trigger: TTCCTCCAGACCCCTGTGGCAGACCGGGGGCCAGAC...TAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCTGTAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCACATGGCCCCCTTTCTTaGTTCCAGAGGACCCATAGG +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPHGPLS*FQRTHR
Trigger: CCTATGGGTCCTCTGGAAGCAAGAAAGGGGGCCATG...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCACCTCCCAGAAGGGGCTaGCGGCGTCGATCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPPPRRG*RRRSRG
Trigger: GCCACGAGATCGACGCCGCCAGCCCCTTCTGGGAGG...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TCTTTGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGGCAAAGATATCCGTGTACTGACGTGAAGCGGTaGCCCCACAGCACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: SLMTGPQWPCDLRQRYPCTDVKR*PHSTSS
Trigger: AGACGAGGTGCTGTGGGGCCACCGCTTCACGTCAGT...ACACGGATATCTTTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp CACATTTCCAGGGGCTTTGCCTTCCTCCTCCTCCTCCTCCTCCACCACCTCCGAAGGTCAAACACAGACTaGCATTTTCACCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HISRGFAFLLLLLLHHLRRSNTD*HFHPAP
Trigger: TGGGGCCGGGTGAAAATGCCAGTCTGTGTTTGACCT...TCGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAAGGCAAAGCCCCTGGAAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCAAGTGGCAGCCCTGAGTaGACCAGTTGTCTACTGGTC +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPSGSPE*TSCLLV
Trigger: GACCAGTAGACAACTGGTCCACTCAGGGCTGCCACT...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCATGACAGGGCCCCAGTaGCCCTGTGACCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCMTGPQ*PCDLRQ
Trigger: TTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCAT...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 72 bp CGGGGACTTTCCAACTTTAGCACATTTCCAGGGGCTTaGCCTTCCTCCTCCTCCTCCTCCTCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: RGLSNFSTFPGA*PSSSSSSSTTS
Trigger: GGAGGTGGTGGAGGAGGAGGAGGAGGAGGAAGGCAAAGCCCCTGGAAATGTGCTAAAGTTGGAAAGTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 72 bp GGGACCAGTCAATGCCAGGCTTCAGGAATCTCATCTTaGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGG +
Preference number: 4 (lower is better)
Translates to: GTSQCQASGISS*MTGPQWPCDLR
Trigger: CCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGATGAGATTCCTGAAGCCTGGCATTGACTGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCACCCTCCATTTCCCTaGAATCAGGACCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGHPPFP*NQDPSL
Trigger: AAGGGAGGGGTCCTGATTTCAGGGAAATGGAGGGTG...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCACCAAGCCCTCCAGGTaGTTCCAACGCACACTGGAG +
Preference number: 4 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCTKPSR*FQRTLE
Trigger: CTCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGT...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCCCCCTCAAGTCCTTCTaGTGGCTTCATCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFPLKSF*WLHLSV
Trigger: GACAGAGAGATGAAGCCATCAGAAGGACTTGAGGGG...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCGCGCGCTTGTTGGGCTaGGAGATCTTGACGAACATG +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGARLLG*EILTNM
Trigger: CATGTTCGTCAAGATCTCGCAGCCCAACAAGCGCGC...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GTTCTACAGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTAGAAGACGAGCGTGGCTaGGCGCTTGTTGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: VLQVSGSPEWTSCLLVHLEDERG*ALVGLR
Trigger: TCGCAGCCCAACAAGCGCGCAGCCACGCTCGTCTTC...TAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCTGTAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp CACATTTCCAGGGGCTTTGCCTTCCTCCTCCTCCTCCTCCTCCACCACCTCCGAGAGGTGACTGGGGACTaGAATCCATCCTATACTCTG +
Preference number: 4 (lower is better)
Translates to: HISRGFAFLLLLLLHHLREVTGD*NPSYTL
Trigger: CAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTC...TCGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAAGGCAAAGCCCCTGGAAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCTCTGCCACAGGGGTCTaGAGGAAGCTGGTCACACCT +
Preference number: 4 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCSATGV*RKLVTP
Trigger: AGGTGTGACCAGCTTCCTCCAGACCCCTGTGGCAGA...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCTCAGCTGCAATGGGTTaGCTCCTGTGTGAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGSAAMG*LLCECV
Trigger: CACGCACTCACACAGGAGCCAACCCATTGCAGCTGA...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 72 bp GCTTCCCTGAACTTGCGGACTAAGGTCATTCACACCTaGCTGAGCCCCTTGCACGCCTTCATCCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ASLNLRTKVIHT*LSPLHAFILVR
Trigger: CCTCACCAGGATGAAGGCGTGCAAGGGGCTCAGCAAGGTGTGAATGACCTTAGTCCGCAAGTTCAGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCACGAAGAAGAGCCAGGTaGGCGCGTAGGCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPRRRAR*ARRPGR
Trigger: TCGTCCTGGCCTACGCGCTCACCTGGCTCTTCTTCG...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCCCAGCAACAGCAGCATaGCCTGGGGACTTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCPATAA*PGDFLG
Trigger: TCCTAAGAAGTCCCCAGGTCATGCTGCTGTTGCTGG...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCATGGTGCCCTGAGTGGTaGCAGTGGCGAGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPWCPEW*QWRGEV
Trigger: CACCTCTCCTCGCCACTGTCACCACTCAGGGCACCA...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCACCACCACCTCCGATATaGAGTTCCCCATGTATCTGT +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPPPPPI*SSPCIC
Trigger: ACAGATACATGGGGAACTGCATATCGGAGGTGGTGG...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCGTCATTAGACAGTTGTaGCATATGTGGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFVIRQL*HMWGGW
Trigger: CCAGCCTCCCCACATATGGCACAACTGTCTAATGAC...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGAGGCACCCTCCTCATGTaGCCATCTTGGTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGGTLLM*PSWSGS
Trigger: GGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCC...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGACCTCCCCGCTCTGCCTaGTTCCCTGAACTTGCGGAC +
Preference number: 4 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGPPRSA*FPELAD
Trigger: GTCCGCAAGTTCAGGGAAGCAGGCAGAGCGGGGAGG...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp AGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTATGTATCTTTGCTGGGCCAGTGCTaGTGTGTGGGAGACAGGCGC +
Preference number: 4 (lower is better)
Translates to: RLVAALSGPVVYWSIYVSLLGQC*CVGDRR
Trigger: GCGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAA...AGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTGGCAGCAGAGACCCCTaGGGGGTGGCGTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: FLPVPDTCKISLHCKKIAGSRDP*GVASMP
Trigger: GGGCATGGACGCCACCCCCCAGGGGTCTCTGCTGCC...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp CACATTTCCAGGGGCTTTGCCTTCCTCCTCCTCCTCCTCCTCCACCACCTCCGAGGGGCTGTATCTGTCTaGAGGAAAAGGGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: HISRGFAFLLLLLLHHLRGAVSV*RKRVPF
Trigger: AAAAGGAACCCTTTTCCTCCAGACAGATACAGCCCC...TCGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAAGGCAAAGCCCCTGGAAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TCTTTGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGGCAAAGATATCCGTGTCCAAGCCATGCACCCTaGTTTGGGGCTGTATCTGTC +
Preference number: 4 (lower is better)
Translates to: SLMTGPQWPCDLRQRYPCPSHAP*FGAVSV
Trigger: GACAGATACAGCCCCAAACCAGGGTGCATGGCTTGG...ACACGGATATCTTTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TCTTTGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGGCAAAGATATCCGTGTCAGTTGTGCCATATGTaGGGAGGCTGGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLMTGPQWPCDLRQRYPCQLCHM*GGWQKR
Trigger: CCTCTTCTGCCAGCCTCCCCACATATGGCACAACTG...ACACGGATATCTTTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCGAGAATATGCGTCTTTaGGACCCCCTGGCCCAATTG +
Preference number: 4 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAENMRL*DPLAQL
Trigger: CAATTGGGCCAGGGGGTCCCAAAGACGCATATTCTC...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGCTATGCCCCATGTCCTaGAACGACTTCCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGLCPMS*NDFQVF
Trigger: GAATACTTGGAAGTCGTTTCAGGACATGGGGCATAG...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCATCCCCAGGGGGCTTATaGAAGGGCAGGAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPSPGGL*KGRSGM
Trigger: CATCCCACTCCTGCCCTTTCATAAGCCCCCTGGGGA...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCATATCCGTGTTTTGACTaGAAGGAAGGGACTGGGACT +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPYPCFD*KEGTGT
Trigger: AGTCCCAGTCCCTTCCTTTCAGTCAAAACACGGATA...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp AGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTATGTATCTGGCAGGCAGCCATTCTaGTCCTTGTCAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RLVAALSGPVVYWSIYVSGRQPF*SLSAPA
Trigger: AGCTGGGGCTGACAAGGAGCAGAATGGCTGCCTGCC...AGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGTCACATTTCTCTGTCTaGTCCTGTGAGGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGSHFSV*SCEDPQ
Trigger: CTGAGGATCCTCACAGGAGCAGACAGAGAAATGTGA...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCACAGACTGAGTTTCTCTaGTTGTTCAGCTGCAATGGG +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPQTEFL*LFSCNG
Trigger: CCCATTGCAGCTGAACAAGCAGAGAAACTCAGTCTG...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCCACTGCACGAAGGTGTaGGCACCTCAAAAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCHCTKV*APQKSR
Trigger: ACGAGACTTTTGAGGTGCCCACACCTTCGTGCAGTG...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCATCCTTCACTTCAGCTTaGCCTACCGTGTCATTAGAC +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPSFTSA*PTVSLD
Trigger: GTCTAATGACACGGTAGGCCAAGCTGAAGTGAAGGA...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCAGAAAATAGCTATCCCTaGTTTTCCTTTCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPENSYP*FSFPRP
Trigger: GGGCCTGGGAAAGGAAAACCAGGGATAGCTATTTTC...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCCCTATCTGCCCAGCCTaGAACAGAGAAGACTGGAGT +
Preference number: 4 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCPICPA*NREDWS
Trigger: ACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGG...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATTCTGGCGCGAGCGGATaGGCTTGGCGCGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYSGASG*AWRGWR
Trigger: CCTCCATCCGCGCCAAGCTCATCCGCTCGCGCCAGA...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTTGTCGAAGCCCACGCTaGGGTCGGTCTGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: FLPVPDTCKISLHCKKIACRSPR*GRSGAA
Trigger: CGCTGCACCAGACCGACCTCAGCGTGGGCTTCGACA...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGGGAAGCTGCCGCTGGTaGCTGGGATGTGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVGSCRW*LGCDQE
Trigger: TTCCTGATCACATCCCAGTCACCAGCGGCAGCTTCC...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGGACTTGGGTCCTCTCTaGGTGAACCCCAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVDLGPL*VNPSCL
Trigger: CAGACAGCTGGGGTTCACTCAGAGAGGACCCAAGTC...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCTTACTGAAACCCAAATaGATCCCCATTCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFLLKPK*IPILHP
Trigger: GGGATGGAGAATGGGGATTCATTTGGGTTTCAGTAA...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATGCAGCAGCAGCACGATaGCCTCGGGGCACTGGTCGG +
Preference number: 4 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYAAAAR*PRGTGR
Trigger: CCGACCAGTGCCCCGAGGGCATCGTGCTGCTGCTGC...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp TCTTTGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGGCAAAGATATCCGTGTTACCCTCCACGGGACTaGACAGGTTGTCAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SLMTGPQWPCDLRQRYPCYPPRD*TGCQFE
Trigger: TTCAAACTGACAACCTGTGCAGTCCCGTGGAGGGTA...ACACGGATATCTTTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp TCTTTGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGGCAAAGATATCCGTGTTCCCACATTCAATCTTaGCTCCAGTCCTACAAGGGG +
Preference number: 4 (lower is better)
Translates to: SLMTGPQWPCDLRQRYPCSHIQS*LQSYKG
Trigger: CCCCTTGTAGGACTGGAGGCAAGATTGAATGTGGGA...ACACGGATATCTTTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCCCCTCCCTTCCATACTaGTTTCTAGACTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAPSLPY*FLDLRF
Trigger: GAACCTCAAGTCTAGAAACCAGTATGGAAGGGAGGG...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp AGGACCCTATCTGCCCAGCCTGGAACAGAGAAGACTGGAGTGCTTTCCCCAGGGGATTCCAACGCACACTaGAGATTTCTAACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RTLSAQPGTEKTGVLSPGDSNAH*RFLTPD
Trigger: GTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATC...CCCTGGGGAAAGCACTCCAGTCTTCTCTGTTCCAGGCTGGGCAGATAGGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGTCATTCACACCTTGCTaGGCCCCTTGCACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVSFTPC*APCTPS
Trigger: TGAAGGCGTGCAAGGGGCTCAGCAAGGTGTGAATGA...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp TCTCTCTTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAACTGGCCCAATTGGGCTaGCAGCAGGCTGCAGACACA +
Preference number: 4 (lower is better)
Translates to: SLFLPVPDTCKISLHCKKLAQLG*QQAADT
Trigger: TGTGTCTGCAGCCTGCTGTCAGCCCAATTGGGCCAG...TTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAAGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGCAGGTGGAGGTGGGGTaGGAATATGCGTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVQVEVG*EYASLG
Trigger: TCCCAAAGACGCATATTCTCACCCCACCTCCACCTG...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCCTGCCTCTCTCAACTTaGAGTTGTTCTCCCTCACTA +
Preference number: 4 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCLPLST*SCSPSL
Trigger: TAGTGAGGGAGAACAACTGCAAGTTGAGAGAGGCAG...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAAAGCTGGTCACACCTTaGACTCACTCTCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPKLVTP*THSLGV
Trigger: CACCCCCAGAGAGTGAGTCCAAGGTGTGACCAGCTT...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GTTCTACAGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTATTAAACTCTTCAGCCTaGGCTTCGGGTCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VLQVSGSPEWTSCLLVHLLNSSA*ASGPFP
Trigger: GGGAAAGGGACCCGAAGCCCAGGCTGAAGAGTTTAA...TAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCTGTAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp AGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTATGTATCTGTGAGTGCGTGTGTGTaGATACCAAGTAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: RLVAALSGPVVYWSIYVSVSACV*IPSSPP
Trigger: GGGTGGGCTACTTGGTATCCACACACACGCACTCAC...AGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCACTCATGAACAAATGTaGAGGTCAAACACAGACTGG +
Preference number: 4 (lower is better)
Translates to: GRRGDWGLQSILYSAPQATHEQM*RSNTDW
Trigger: CCAGTCTGTGTTTGACCTTCACATTTGTTCATGAGT...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCCACAGGTTGTCAGTTTaGATTATCCCTCGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCHRLSV*IIPRSV
Trigger: GACTGAACGAGGGATAATTCAAACTGACAACCTGTG...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGCTGCCCTGTTTCCATTaGTGGTTGAGTTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVLPCFH*WLSFWA
Trigger: GGCCCAGAAACTCAACCATCAATGGAAACAGGGCAG...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGAAGTGGCCCTGTGACCTaGGGCAAAGATATCCGTGTT +
Preference number: 4 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGSGPVT*GKDIRV
Trigger: AACACGGATATCTTTGCCTCAGGTCACAGGGCCACT...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGGGCCTTTCCAGACTaGGTTTCTCTGCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPGAFPD*VSLLVQ
Trigger: CTGAACAAGCAGAGAAACTCAGTCTGGAAAGGCCCC...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTAGGAGAAGACGAGCGTaGCTGCGCGCTTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FLPVPDTCKISLHCKKIARRRRA*LRACWA
Trigger: AGCCCAACAAGCGCGCAGCCACGCTCGTCTTCTCCT...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGCTAGACTTGAGGTTCTaGGGGACGGGGACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVLDLRF*GTGTFQ
Trigger: TTGGAAAGTCCCCGTCCCCCAGAACCTCAAGTCTAG...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGACTCATGTGCCCATCTTaGTCCGGCTCCTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGLMCPS*SGSFLL
Trigger: AAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAG...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
3UTR CAA 72 bp CCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCAGCTaGGCCTACCGTGTCATTAGACAGTTGTGCCATATG +
Preference number: 4 (lower is better)
Translates to: PSWSGSFLLHFS*AYRVIRQLCHM
Trigger: CATATGGCACAACTGTCTAATGACACGGTAGGCCAAGCTGAAGTGAAGGAGAAAGGAGCCGGACCAAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp TCTCTCTTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAACTCTGCCTGCTTCCCTaGACTTGCGGACTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SLFLPVPDTCKISLHCKKLCLLP*TCGLRS
Trigger: TGACCTTAGTCCGCAAGTTCAGGGAAGCAGGCAGAG...TTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGCAGGAACCAGGTTTTTaGATGTCCACTCCACATGGC +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVQEPGF*MSTPHG
Trigger: GCCATGTGGAGTGGACATTCAAAAACCTGGTTCCTG...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGCTCTCTCTCTCTTCCTaGCTGTGCCTGATACCTGTA +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVLSLSS*LCLIPV
Trigger: TACAGGTATCAGGCACAGGCAGGAAGAGAGAGAGAG...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCACTTACATATTCCCTATaGCTTACACTGGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPLTYSL*LTLAPA
Trigger: GGCTGGGGCCAGTGTAAGGCATAGGGAATATGTAAG...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCACCCTCCACTTGTCACTaGCCTGTTTCCATTGATGGT +
Preference number: 4 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPPSTCH*PVSIDG
Trigger: ACCATCAATGGAAACAGGGCAGTGACAAGTGGAGGG...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATTCCTTGCTGGGCCAGTaGTGCTGTGTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYSLLGQ*CCVGDR
Trigger: CCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGA...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TCTCTCTTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAGGGTCTGGAGGAAGCTaGTCACACCTTGGACTCACT +
Preference number: 4 (lower is better)
Translates to: SLFLPVPDTCKISLHCKKGSGGS*SHLGLT
Trigger: AGTGAGTCCAAGGTGTGACCAGCTTCCTCCAGACCC...TTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TCTCTCTTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAACCCTATGCCTTACACTaGCCCCAGCCTTCTGATCAC +
Preference number: 4 (lower is better)
Translates to: SLFLPVPDTCKISLHCKKPYALH*PQPSDH
Trigger: GTGATCAGAAGGCTGGGGCCAGTGTAAGGCATAGGG...TTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGACAGGTTCTCAAAGTGTaGTCCTCAGTCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGQVLKV*SSVQQQ
Trigger: CTGTTGCTGGACTGAGGACCACACTTTGAGAACCTG...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGCTTGTTCAGCTGCAATaGGTTGGCTCCTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVLVQLQ*VGSCVS
Trigger: ACTCACACAGGAGCCAACCCATTGCAGCTGAACAAG...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTTGGCGAGGAGAGGTGTaGCAGGGTCTCAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: FLPVPDTCKISLHCKKIAWRGEV*QGLSDF
Trigger: GAAGTCACTGAGACCCTGCCACACCTCTCCTCGCCA...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTATGTATCTAGGTGCCCCTTATTTTaGGGACAGGAACCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RLVAALSGPVVYWSIYVSRCPLF*GQEPGF
Trigger: AAAACCTGGTTCCTGTCCTCAAAATAAGGGGCACCT...AGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGACTGAGGCCCAGATATaGGATTTGCCCAGAGTCATA +
Preference number: 4 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVTEAQI*DLPRVI
Trigger: TATGACTCTGGGCAAATCGCATATCTGGGCCTCAGT...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTTCTCATCCAGCCGGCTaGGGATGGACCAGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: FLPVPDTCKISLHCKKIASHPAG*GWTSRD
Trigger: ATCTCTACTGGTCCATCCCCAGCCGGCTGGATGAGA...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR TCA 90 bp AGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTATGTATCTAAGATATCCGTGTTTTaGCTGAAAGGAAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: RLVAALSGPVVYWSIYVSKISVF*LKGRDW
Trigger: CCAGTCCCTTCCTTTCAGTCAAAACACGGATATCTT...AGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTGGTCTCCTGACTTGTTaGACTGTACAGTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: FLPVPDTCKISLHCKKIAGLLTC*TVQWCP
Trigger: AGGGCACCACTGTACAGTGCAACAAGTCAGGAGACC...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAAAGTCTCGTGAAAGCTaGCATAGTCCACTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPKSRES*HSPLRR
Trigger: TCTACGAAGTGGACTATGCCAGCTTTCACGAGACTT...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATCTCTGCTTGTTCAGCTaGAATGGGTTGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYLCLFS*NGLAPV
Trigger: CACAGGAGCCAACCCATTGCAGCTGAACAAGCAGAG...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp TCTCTCTTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAAATGTCCACTCCACATaGCACCCAATCAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: SLFLPVPDTCKISLHCKKNVHST*HPISDV
Trigger: CACATCACTGATTGGGTGCCATGTGGAGTGGACATT...TTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CCA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATGGAAGCAGGTGGAGGTaGGGTGAGAATATGCGTCTT +
Preference number: 4 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYGSRWR*GENMRL
Trigger: AAGACGCATATTCTCACCCCACCTCCACCTGCTTCC...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATCTCTCTTCCTGCCTGTaGCTGATACCTGTAAGATCT +
Preference number: 4 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYLSSCL*LIPVRS
Trigger: AGATCTTACAGGTATCAGGCACAGGCAGGAAGAGAG...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR GCA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTTCAGCTGTCTTTATCTaGTACCATCTTCCCATCCAA +
Preference number: 4 (lower is better)
Translates to: FLPVPDTCKISLHCKKIASAVFI*YHLPIQ
Trigger: TTGGATGGGAAGATGGTAGCAGATAAAGACAGCTGA...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS GCA 90 bp CGCCGCGGCGGCTCCTCCTGCCCGGGCGAGAAGGCCGCGTTCTCCTaGGCCATGGCGGCCGCGTCAGGGCGAGCGCTGCGGGCGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RRGGSSCPGEKAAFS*AMAAASGRALRAPG
Trigger: TCCAGGCGCCCGCAGCGCTCGCCCTGACGCGGCCGCCATGGCGCAGGAGAACGCGGCCTTCTCGCCCGGGCAGGAGGAGCCGCCGCGGCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS CCA 90 bp GCGGCTCCTCCTGCCCGGGCGAGAAGGCCGCGTTCTCCTGCGCCATaGCGGCCGCGTCAGGGCGAGCGCTGCGGGCGCCTGGAGTGCGGC +
Preference number: 5 (lower is better)
Translates to: AAPPARARRPRSPAP*RPRQGERCGRLECG
Trigger: GCCGCACTCCAGGCGCCCGCAGCGCTCGCCCTGACGCGGCCGCCATGGCGCAGGAGAACGCGGCCTTCTCGCCCGGGCAGGAGGAGCCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GGGCCAAGGGAGGAGGTCCTTGCTGGGCCAGTGCTGCTGTGTGGGAGACAGGCGTTTGGTCCCCACCTCTaGGGTCAGAAACCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GPREEVLAGPVLLCGRQAFGPHL*GQKPLE
Trigger: CTCCAAGGGTTTCTGACCCAAGAGGTGGGGACCAAA...CGCCTGTCTCCCACACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS GCA 90 bp GGGGATGGACCAGTAGAGATGGGCATCAAGGCGGGCGGCAGCCTCTaGCAGCTCTCGAGCACTGCACGAAGGTGTGGGCACCTCAAAAGT +
Preference number: 5 (lower is better)
Translates to: GDGPVEMGIKAGGSL*QLSSTARRCGHLKS
Trigger: ACTTTTGAGGTGCCCACACCTTCGTGCAGTGCTCGAGAGCTGGCAGAGGCTGCCGCCCGCCTTGATGCCCATCTCTACTGGTCCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS GCA 90 bp GATGGGCATCAAGGCGGGCGGCAGCCTCTGCCAGCTCTCGAGCACTaGACGAAGGTGTGGGCACCTCAAAAGTCTCGTGAAAGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: DGHQGGRQPLPALEH*TKVWAPQKSRESWH
Trigger: ATGCCAGCTTTCACGAGACTTTTGAGGTGCCCACACCTTCGTGCAGTGCTCGAGAGCTGGCAGAGGCTGCCGCCCGCCTTGATGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS CCA 90 bp GGCGGGCGGCAGCCTCTGCCAGCTCTCGAGCACTGCACGAAGGTGTaGGCACCTCAAAAGTCTCGTGAAAGCTGGCATAGTCCACTTCGT +
Preference number: 5 (lower is better)
Translates to: GGRQPLPALEHCTKV*APQKSRESWHSPLR
Trigger: ACGAAGTGGACTATGCCAGCTTTCACGAGACTTTTGAGGTGCCCACACCTTCGTGCAGTGCTCGAGAGCTGGCAGAGGCTGCCGCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCAAGCCGTTGAGGTTGTaGACGCACGGCGTCCACGCG +
Preference number: 5 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAKPLRL*THGVHA
Trigger: CGCGTGGACGCCGTGCGTCAACAACCTCAACGGCTT...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCAACGAAGCCGTTGAGGTaGTTGACGCACGGCGTCCAC +
Preference number: 5 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPTKPLR*LTHGVH
Trigger: GTGGACGCCGTGCGTCAACAACCTCAACGGCTTCGT...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCAACCTTGCTGAGCCCCTaGCACGCCTTCATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPTLLSP*HAFILV
Trigger: CACCAGGATGAAGGCGTGCAAGGGGCTCAGCAAGGT...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCCCTCATGTGCCCATCTaGGTCCGGCTCCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFPHVPI*VRLLSP
Trigger: AGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGG...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCAAGGTCATTCACACCTaGCTGAGCCCCTTGCACGCC +
Preference number: 5 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFKVIHT*LSPLHA
Trigger: GGCGTGCAAGGGGCTCAGCAAGGTGTGAATGACCTT...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCGAAGCTGGTCACACCTaGGACTCACTCTCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAEAGHT*DSLSGG
Trigger: ACCCCCAGAGAGTGAGTCCAAGGTGTGACCAGCTTC...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCTACTGGTTTCTAGACTaGAGGTTCTGGGGGACGGGG +
Preference number: 5 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFYWFLD*RFWGTG
Trigger: CCCCGTCCCCCAGAACCTCAAGTCTAGAAACCAGTA...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGAGCGGCCACGAAGCCGTaGAGGTTGTTGACGCACGGC +
Preference number: 5 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGAATKP*RLLTHG
Trigger: GCCGTGCGTCAACAACCTCAACGGCTTCGTGGCCGC...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp ACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCCCCCGGTCTGCCACTCCCACATTCAATCTaGCCTCCAGTCCTACAAGGG +
Preference number: 5 (lower is better)
Translates to: TTSDMQFPMYLCLAPGLPLPHSI*PPVLQG
Trigger: CCCTTGTAGGACTGGAGGCAAGATTGAATGTGGGAG...TGGCAGACCGGGGGCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGGTGGCTGCGCGCTTGTaGGGCTGCGAGATCTTGACG +
Preference number: 5 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVVAARL*GCEILT
Trigger: CGTCAAGATCTCGCAGCCCAACAAGCGCGCAGCCAC...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp AGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTATGTATCTAGCGTGGCTGCGCGCTaGTTGGGCTGCGAGATCTTG +
Preference number: 5 (lower is better)
Translates to: RLVAALSGPVVYWSIYVSSVAAR*LGCEIL
Trigger: CAAGATCTCGCAGCCCAACAAGCGCGCAGCCACGCT...AGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCCCTGCTTCCCTGAACTaGCGGACTAAGGTCATTCAC +
Preference number: 5 (lower is better)
Translates to: GRRGDWGLQSILYSAPQAPASLN*RTKVIH
Trigger: GTGAATGACCTTAGTCCGCAAGTTCAGGGAAGCAGG...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGATATGTCTCGCGCACGTaGCCCTGCTGCACGTTGCAC +
Preference number: 5 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGYVSRT*PCCTLH
Trigger: GTGCAACGTGCAGCAGGGCAACGTGCGCGAGACATA...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp AGGTTAGTGGCAGCCCTGAGTGGACCAGTTGTCTACTGGTCCATCTATGTATCTCAGCCATTCTGCTCCTaGTCAGCCCCAGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: RLVAALSGPVVYWSIYVSQPFCS*SAPASP
Trigger: TGGGGAAGCTGGGGCTGACAAGGAGCAGAATGGCTG...AGATACATAGATGGACCAGTAGACAACTGGTCCACTCAGGGCTGCCACTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GAGGGCACCCTCCTCATGTGCCCATCTTGGTCCGGCTCCTTTCTCCTTCACTTCACAGGAACCAGGTTTTaGAATGTCCACTCCACATGG +
Preference number: 5 (lower is better)
Translates to: EGTLLMCPSWSGSFLLHFTGTRF*NVHSTW
Trigger: CCATGTGGAGTGGACATTCAAAAACCTGGTTCCTGT...GAAGTGAAGGAGAAAGGAGCCGGACCAAGATGGGCACATGAGGAGGGTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp CTCCTCCTCCTCCACCACCTCCGATATGCAGTTCCCCATGTATCTGTGTCTGGCTTGGGTCAGAAACCCTaGGAGTGGAGCCCAAAAATC +
Preference number: 5 (lower is better)
Translates to: LLLLHHLRYAVPHVSVSGLGQKP*EWSPKI
Trigger: GATTTTTGGGCTCCACTCCAAGGGTTTCTGACCCAA...GCCAGACACAGATACATGGGGAACTGCATATCGGAGGTGGTGGAGGAGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp TCTCTCTTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAATTGCCCTGCTGCACGTaGCACCGGCCATCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SLFLPVPDTCKISLHCKKLPCCT*HRPSFS
Trigger: GGAGAAGGATGGCCGGTGCAACGTGCAGCAGGGCAA...TTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCATGCACTGCCCTGTTTCCATaGATGGTTGAGTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: EEVTGDCNPSYTLLPKPCTALFP*MVEFLG
Trigger: GCCCAGAAACTCAACCATCAATGGAAACAGGGCAGT...GCATGGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GGCAGAAGAGGTGACTGGGGACTGCAATCCATCCTATACTCTGCTCCCCAAGCCTCTCTCAACTTGCAGTaGTTCTCCCTCACTATCCAG +
Preference number: 5 (lower is better)
Translates to: GRRGDWGLQSILYSAPQASLNLQ*FSLTIQ
Trigger: CTGGATAGTGAGGGAGAACAACTGCAAGTTGAGAGA...GGCTTGGGGAGCAGAGTATAGGATGGATTGCAGTCCCCAGTCACCTCTTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GGTCAGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAAGACACCCCCTCCACTaGTCACTGCCCTGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: GQKPLEWSPKICVLPSPPRHPLH*SLPCFH
Trigger: ATGGAAACAGGGCAGTGACAAGTGGAGGGGGTGTCT...TGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTCAAGGGAGGAGGTCCTaGCTGGGCCAGTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FLPVPDTCKISLHCKKIAQGRRS*LGQCCC
Trigger: ACAGCAGCACTGGCCCAGCAAGGACCTCCTCCCTTG...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp TCTCTCTTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAACATTTCCAGGGGCTTaGCCTTCCTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLFLPVPDTCKISLHCKKTFPGA*PSSSSS
Trigger: GGAGGAGGAGGAGGAAGGCAAAGCCCCTGGAAATGT...TTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGTCAGGAATCTCATCTTaGATGACAGGGCCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVSGISS*MTGPQW
Trigger: CCACTGGGGCCCTGTCATCAAAGATGAGATTCCTGA...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTGCCATGCACCCTGGTTaGGGGCTGTATCTGTCTGGA +
Preference number: 5 (lower is better)
Translates to: FLPVPDTCKISLHCKKIAAMHPG*GLYLSG
Trigger: TCCAGACAGATACAGCCCCAAACCAGGGTGCATGGC...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGATTCCAACGCACACTGGACAGGTGCCCCTTATTTaGAGGACAGGAACCAGGTTT +
Preference number: 5 (lower is better)
Translates to: AQKSVFYQALQVIPTHTGQVPLI*RTGTRF
Trigger: AAACCTGGTTCCTGTCCTCAAAATAAGGGGCACCTG...TCCAGTGTGCGTTGGAATCACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGTCTGCCTCTCTCAACTaGCAGTTGTTCTCCCTCACT +
Preference number: 5 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVSASLN*QLFSLT
Trigger: AGTGAGGGAGAACAACTGCAAGTTGAGAGAGGCAGA...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGGCCCAGATATGCGATTaGCCCAGAGTCATAGAGCTA +
Preference number: 5 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVAQICD*PRVIEL
Trigger: TAGCTCTATGACTCTGGGCAAATCGCATATCTGGGC...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTAGGTCTCCTGACTTGTaGCACTGTACAGTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: FLPVPDTCKISLHCKKIARSPDL*HCTVVP
Trigger: GGGCACCACTGTACAGTGCAACAAGTCAGGAGACCT...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp TCTCTCTTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAACTCCTTCACTTCAGCTaGGCCTACCGTGTCATTAGA +
Preference number: 5 (lower is better)
Translates to: SLFLPVPDTCKISLHCKKLLHFS*AYRVIR
Trigger: TCTAATGACACGGTAGGCCAAGCTGAAGTGAAGGAG...TTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp AGAAACCCTTGGAGTGGAGCCCAAAAATCTGTGTTTTACCAAGCCCTCCAGGTGGCACAGGTTGTCAGTTaGAATTATCCCTCGTTCAGT +
Preference number: 5 (lower is better)
Translates to: RNPWSGAQKSVFYQALQVAQVVS*NYPSFS
Trigger: ACTGAACGAGGGATAATTCAAACTGACAACCTGTGC...CACCTGGAGGGCTTGGTAAAACACAGATTTTTGGGCTCCACTCCAAGGGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp TCTTTGATGACAGGGCCCCAGTGGCCCTGTGACCTGAGGCAAAGATATCCGTGTTTGAGCATTACGAGTTaGCTGTCATTTTTACAGATG +
Preference number: 5 (lower is better)
Translates to: SLMTGPQWPCDLRQRYPCLSITS*LSFLQM
Trigger: CATCTGTAAAAATGACAGCAAACTCGTAATGCTCAA...ACACGGATATCTTTGCCTCAGGTCACAGGGCCACTGGGGCCCTGTCATCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATCCTAGGTCTCCTGACTaGTTGCACTGTACAGTGGTG +
Preference number: 5 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYPRSPD*LHCTVV
Trigger: CACCACTGTACAGTGCAACAAGTCAGGAGACCTAGG...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp TTCCTGCCTGTGCCTGATACCTGTAAGATCTCACTCCACTGTAAGAAAATAGCTACTGAGTTTCTCTGCTaGTTCAGCTGCAATGGGTTG +
Preference number: 5 (lower is better)
Translates to: FLPVPDTCKISLHCKKIATEFLC*FSCNGL
Trigger: CAACCCATTGCAGCTGAACAAGCAGAGAAACTCAGT...AGCTATTTTCTTACAGTGGAGTGAGATCTTACAGGTATCAGGCACAGGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS-3UTR CAA 90 bp GGTGATTCCAACGCACACTGGAGATTTCTAACTCCTGACTTACATATTCCCTATAAAGATATCCGTGTTTaGACTGAAAGGAAGGGACTG +
Preference number: 5 (lower is better)
Translates to: GDSNAHWRFLTPDLHIPYKDIRV*TERKGL
Trigger: CAGTCCCTTCCTTTCAGTCAAAACACGGATATCTTT...ATAGGGAATATGTAAGTCAGGAGTTAGAAATCTCCAGTGTGCGTTGGAATCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS CCA 72 bp CCTGCCCGGGCGAGAAGGCCGCGTTCTCCTGCGCCATaGCGGCCGCGTCAGGGCGAGCGCTGCGGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: PARARRPRSPAP*RPRQGERCGRL
Trigger: CAGGCGCCCGCAGCGCTCGCCCTGACGCGGCCGCCATGGCGCAGGAGAACGCGGCCTTCTCGCCCGGGCAGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS GCA 72 bp GGCTCCTCCTGCCCGGGCGAGAAGGCCGCGTTCTCCTaGGCCATGGCGGCCGCGTCAGGGCGAGCGCTGCGG +
Preference number: 6 (lower is better)
Translates to: GSSCPGEKAAFS*AMAAASGRALR
Trigger: CCGCAGCGCTCGCCCTGACGCGGCCGCCATGGCGCAGGAGAACGCGGCCTTCTCGCCCGGGCAGGAGGAGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS GCA 72 bp CCAGTAGAGATGGGCATCAAGGCGGGCGGCAGCCTCTaGCAGCTCTCGAGCACTGCACGAAGGTGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: PVEMGIKAGGSL*QLSSTARRCGH
Trigger: GTGCCCACACCTTCGTGCAGTGCTCGAGAGCTGGCAGAGGCTGCCGCCCGCCTTGATGCCCATCTCTACTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS CCA 72 bp CCTCCTCCTCCACCTTCTCATCCAGCCGGCTGGGGATaGACCAGTAGAGATGGGCATCAAGGCGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: PPPPPSHPAGWG*TSRDGHQGGRQ
Trigger: CTGCCGCCCGCCTTGATGCCCATCTCTACTGGTCCATCCCCAGCCGGCTGGATGAGAAGGTGGAGGAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS GCA 72 bp CGACACCACGGCGTGCGAGGAGAAGACGAGCGTGGCTaGGCGCTTGTTGGGCTGCGAGATCTTGACGAACAT +
Preference number: 6 (lower is better)
Translates to: RHHGVRGEDERG*ALVGLRDLDEH
Trigger: ATGTTCGTCAAGATCTCGCAGCCCAACAAGCGCGCAGCCACGCTCGTCTTCTCCTCGCACGCCGTGGTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS GCA 72 bp CAAGGCGGGCGGCAGCCTCTGCCAGCTCTCGAGCACTaGACGAAGGTGTGGGCACCTCAAAAGTCTCGTGAA +
Preference number: 6 (lower is better)
Translates to: QGGRQPLPALEH*TKVWAPQKSRE
Trigger: TTCACGAGACTTTTGAGGTGCCCACACCTTCGTGCAGTGCTCGAGAGCTGGCAGAGGCTGCCGCCCGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS CCA 72 bp GGAAGCTGGTCACACCTTGGACTCACTCTCTGGGGGTaGCAGGCAGCCATTCTGCTCCTTGTCAGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: GSWSHLGLTLWG*QAAILLLVSPS
Trigger: GCTGGGGCTGACAAGGAGCAGAATGGCTGCCTGCCACCCCCAGAGAGTGAGTCCAAGGTGTGACCAGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS CAA 72 bp GTCTGCCACAGGGGTCTGGAGGAAGCTGGTCACACCTaGGACTCACTCTCTGGGGGTGGCAGGCAGCCATTC +
Preference number: 6 (lower is better)
Translates to: VCHRGLEEAGHT*DSLSGGGRQPF
Trigger: GAATGGCTGCCTGCCACCCCCAGAGAGTGAGTCCAAGGTGTGACCAGCTTCCTCCAGACCCCTGTGGCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368088.4
CDS CCA 72 bp CAGCCTCTGCCAGCTCTCGAGCACTGCACGAAGGTGTaGGCACCTCAAAAGTCTCGTGAAAGCTGGCATAGT +
Preference number: 6 (lower is better)
Translates to: QPLPALEHCTKV*APQKSRESWHS
Trigger: ACTATGCCAGCTTTCACGAGACTTTTGAGGTGCCCACACCTTCGTGCAGTGCTCGAGAGCTGGCAGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368088.4