RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNJ8 (Homo sapiens)

Ensembl gene IDs: ENSG00000121361

Ensembl transcript IDs: ENST00000240662.3, ENST00000537950.1, ENST00000657855.1, ENST00000665145.1, ENST00000667884.1

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACAGGCCGCAATaGGATGGACCAGGAAACCTTCAGGAGTCACCGACAGACAAAGCG +
Preference number: 1 (lower is better)
Translates to: FPSKTPCPALPNRPQ*DGPGNLQESPTDKA
Trigger: CGCTTTGTCTGTCGGTGACTCCTGAAGGTTTCCTGGTCCATCTCATTGCGGCCTGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR GCA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTaGCCAACAGGCCGCAATGAGATGGACCAGGAAACCTTCAGGAGT +
Preference number: 1 (lower is better)
Translates to: MRQDLAFLQRHLVQL*PTGRNEMDQETFRS
Trigger: ACTCCTGAAGGTTTCCTGGTCCATCTCATTGCGGCCTGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR TCA 90 bp GACCAGGAAACCTTCAGGAGTCACCGACAGACAAAGCGAATGAACTaGATCCACTTACAAACAGATCCACTTAAGCAGTTTTTGCCTCAG +
Preference number: 1 (lower is better)
Translates to: DQETFRSHRQTKRMN*IHLQTDPLKQFLPQ
Trigger: CTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAGGTTTCCTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR TCA 90 bp AGATGGACCAGGAAACCTTCAGGAGTCACCGACAGACAAAGCGAATaGACTGAATCCACTTACAAACAGATCCACTTAAGCAGTTTTTGC +
Preference number: 1 (lower is better)
Translates to: RWTRKPSGVTDRQSE*TESTYKQIHLSSFC
Trigger: GCAAAAACTGCTTAAGTGGATCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAGGTTTCCTGGTCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR GCA 90 bp AAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATaGAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCAT +
Preference number: 1 (lower is better)
Translates to: KQIHLSSFCLRLPTK*SYHGDRRRLMYKTH
Trigger: ATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR CCA 90 bp TATTCTATTTGCATTTCCAGAGTGATCATTAGTAACACAGCGATCTaGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACC +
Preference number: 1 (lower is better)
Translates to: YSICISRVIISNTAI*VSPTKHFKQTHFLT
Trigger: GGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAATGCAAATAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR CCA 90 bp GAATTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTaGTGTGTTACTTTTTATTACTACAGAAAGTGCTGTTGCTTGAAT +
Preference number: 1 (lower is better)
Translates to: EFYMYETSISHESST*CVTFYYYRKCCCLN
Trigger: ATTCAAGCAACAGCACTTTCTGTAGTAATAAAAAGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR TCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAACAAGCATAAGCCATaGATCCTCCACTTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: KQFLPQASYQMQLSWRQENKHKP*ILHLVC
Trigger: ACACACCAAGTGGAGGATTCATGGCTTATGCTTGTT...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR TCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGAAACAAGCATAAGCCATaGATCCTCCACTTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: LRETSIPTPAHNLSISLRNKHKP*ILHLVC
Trigger: ACACACCAAGTGGAGGATTCATGGCTTATGCTTGTT...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CCA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACAAGTAACACAGCGATCTaGGTTTCACCAACTAAGCAT +
Preference number: 2 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTSNTAI*VSPTKH
Trigger: ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACT...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR TCA 90 bp AGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGTCTTGTGTTTCAAATTaGGAGAAACGAGCATACCCA +
Preference number: 2 (lower is better)
Translates to: SFCLRLPTKCSYHGDRRRSCVSN*EKRAYP
Trigger: TGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGA...CCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR TCA 90 bp GCATTTCAAACAGACTCATTTCTTGACCAAATTTTGTGCTCAAGGCCTGTTACTAACAAGCATAAGCCATaGATCCTCCACTTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: AFQTDSFLDQILCSRPVTNKHKP*ILHLVC
Trigger: ACACACCAAGTGGAGGATTCATGGCTTATGCTTGTT...AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR GCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGACTTGACCAAATTTTGTaGTCAAGGCCTGTTACTATT +
Preference number: 2 (lower is better)
Translates to: LQESPTDKANELNPLTNRLDQIL*SRPVTI
Trigger: AATAGTAACAGGCCTTGAGCACAAAATTTGGTCAAG...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR GCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGACCCTCCTATTCTATTTaGATTTCCAGAGTGATCATT +
Preference number: 2 (lower is better)
Translates to: LQESPTDKANELNPLTNRPSYSI*ISRVII
Trigger: AATGATCACTCTGGAAATGCAAATAGAATAGGAGGG...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CCA 90 bp AGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGACATGAATCCTCCACTTaGTGTGTTACTTTTTATTAC +
Preference number: 2 (lower is better)
Translates to: SSFCLRLPTKCSYHGDRRHESST*CVTFYY
Trigger: GTAATAAAAAGTAACACACCAAGTGGAGGATTCATG...TCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGACATGAATCCTCCACTTaGTGTGTTACTTTTTATTAC +
Preference number: 2 (lower is better)
Translates to: LRETSIPTPAHNLSISLRHESST*CVTFYY
Trigger: GTAATAAAAAGTAACACACCAAGTGGAGGATTCATG...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR TCA 90 bp ATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACCAAATTTTCTTGTGTTTCAAATTaGGAGAAACGAGCATACCCA +
Preference number: 2 (lower is better)
Translates to: IWVSPTKHFKQTHFLTKFSCVSN*EKRAYP
Trigger: TGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGA...AAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CCA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATCATGAATCCTCCACTTaGTGTGTTACTTTTTATTAC +
Preference number: 2 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHHESST*CVTFYY
Trigger: GTAATAAAAAGTAACACACCAAGTGGAGGATTCATG...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR TCA 72 bp AAGACACCTTGTCCAGCTCTGCCCAACAGGCCGCAATaGGATGGACCAGGAAACCTTCAGGAGTCACCGACA +
Preference number: 3 (lower is better)
Translates to: KTPCPALPNRPQ*DGPGNLQESPT
Trigger: TGTCGGTGACTCCTGAAGGTTTCCTGGTCCATCTCATTGCGGCCTGTTGGGCAGAGCTGGACAAGGTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR CCA 72 bp ACCTTGTCCAGCTCTGCCCAACAGGCCGCAATGAGATaGACCAGGAAACCTTCAGGAGTCACCGACAGACAA +
Preference number: 3 (lower is better)
Translates to: TLSSSAQQAAMR*TRKPSGVTDRQ
Trigger: TTGTCTGTCGGTGACTCCTGAAGGTTTCCTGGTCCATCTCATTGCGGCCTGTTGGGCAGAGCTGGACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CAA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACACCACTTAAGCAGTTTTaGCCTCAGGCTTCCTACCAA +
Preference number: 3 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTPLKQF*PQASYQ
Trigger: TTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGG...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CAA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGACCACTTAAGCAGTTTTaGCCTCAGGCTTCCTACCAA +
Preference number: 3 (lower is better)
Translates to: LQESPTDKANELNPLTNRPLKQF*PQASYQ
Trigger: TTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGG...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR GCA 72 bp CACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATaGAGTTATCATGGAGACAGGAGAAGGCTGATGTAC +
Preference number: 3 (lower is better)
Translates to: HLSSFCLRLPTK*SYHGDRRRLMY
Trigger: GTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR TCA 72 bp AGGAAACCTTCAGGAGTCACCGACAGACAAAGCGAATaGACTGAATCCACTTACAAACAGATCCACTTAAGC +
Preference number: 3 (lower is better)
Translates to: RKPSGVTDRQSE*TESTYKQIHLS
Trigger: GCTTAAGTGGATCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAGGTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CAA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGTTCTTGTGTTTCAAATaGAGAGAAACGAGCATACCC +
Preference number: 3 (lower is better)
Translates to: KQFLPQASYQMQLSWRQEFLCFK*RETSIP
Trigger: GGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAA...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CAA 90 bp AGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGTTTCTTGACCAAATTTaGTGCTCAAGGCCTGTTACT +
Preference number: 3 (lower is better)
Translates to: SFCLRLPTKCSYHGDRRRFLDQI*CSRPVT
Trigger: AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAA...CCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR TCA 72 bp ACCTTCAGGAGTCACCGACAGACAAAGCGAATGAACTaGATCCACTTACAAACAGATCCACTTAAGCAGTTT +
Preference number: 3 (lower is better)
Translates to: TFRSHRQTKRMN*IHLQTDPLKQF
Trigger: AAACTGCTTAAGTGGATCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CAA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTACCCCTCCTATTCTATTaGCATTTCCAGAGTGATCAT +
Preference number: 3 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLPLLFY*HFQSDH
Trigger: ATGATCACTCTGGAAATGCAAATAGAATAGGAGGGG...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR GCA 72 bp GAATCCACTTACAAACAGATCCACTTAAGCAGTTTTTaGCTCAGGCTTCCTACCAAATGCAGTTATCATGGA +
Preference number: 3 (lower is better)
Translates to: ESTYKQIHLSSF*LRLPTKCSYHG
Trigger: TCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTAAGTGGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CAA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTATTCTTGTGTTTCAAATaGAGAGAAACGAGCATACCC +
Preference number: 3 (lower is better)
Translates to: YQMQLSWRQEKADVQNALFLCFK*RETSIP
Trigger: GGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAA...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CAA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTATTTCTTGACCAAATTTaGTGCTCAAGGCCTGTTACT +
Preference number: 3 (lower is better)
Translates to: YQMQLSWRQEKADVQNALFLDQI*CSRPVT
Trigger: AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAA...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR CCA 72 bp TGCATTTCCAGAGTGATCATTAGTAACACAGCGATCTaGGTTTCACCAACTAAGCATTTCAAACAGACTCAT +
Preference number: 3 (lower is better)
Translates to: CISRVIISNTAI*VSPTKHFKQTH
Trigger: ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR-3UTR CAA 90 bp GCATTTCAAACAGACTCATTTCTTGACCAAATTTTGTGCTCAAGGCCTGTTACTTTCTTGTGTTTCAAATaGAGAGAAACGAGCATACCC +
Preference number: 3 (lower is better)
Translates to: AFQTDSFLDQILCSRPVTFLCFK*RETSIP
Trigger: GGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAA...AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR CCA 72 bp ATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTaGTGTGTTACTTTTTATTACTACAGAAAGTGCTGT +
Preference number: 3 (lower is better)
Translates to: MYETSISHESST*CVTFYYYRKCC
Trigger: ACAGCACTTTCTGTAGTAATAAAAAGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp AGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTCGCTCTCCCATGCTaGCGCGCGGGACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SFCLRLPTKCSYHGDRRRLALPC*RAGPGA
Trigger: GGCCCCTGGTCCCGCGCGCCAGCATGGGAGAGCGAG...CCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGTCCCTCGCTCTCCCATaGTGGCGCGCGGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWSLALP*WRAGPG
Trigger: CCCTGGTCCCGCGCGCCAGCATGGGAGAGCGAGGGA...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTCCCTCGCTCTCCCATaGTGGCGCGCGGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSSLALP*WRAGPG
Trigger: CCCTGGTCCCGCGCGCCAGCATGGGAGAGCGAGGGA...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp AGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGACTCGGATGCGCGGCTTaGGCAGGTTCTCTGCGGCGA +
Preference number: 4 (lower is better)
Translates to: SSFCLRLPTKCSYHGDRRLGCAA*AGSLRR
Trigger: TCGCCGCAGAGAACCTGCGCAAGCCGCGCATCCGAG...TCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGGGAGGCGGTCTCGGATaGGCGGCTTGCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQEGGGLG*AACAGS
Trigger: AGAACCTGCGCAAGCCGCGCATCCGAGACCGCCTCC...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp AGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCACCTCCCTCTCACCTaGCTCTCCGTCCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: SFCLRLPTKCSYHGDRRRHLPLT*LSVPGH
Trigger: GTGTCCAGGGACGGAGAGGCAGGTGAGAGGGAGGTG...CCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGCTTGCGCAGGTTCTCTaGGGCGATGCGCGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRLAQVL*GDARQH
Trigger: GTGCTGGCGCGCATCGCCGCAGAGAACCTGCGCAAG...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGACTCGGATGCGCGGCTTaGGCAGGTTCTCTGCGGCGA +
Preference number: 4 (lower is better)
Translates to: LRETSIPTPAHNLSISLRLGCAA*AGSLRR
Trigger: TCGCCGCAGAGAACCTGCGCAAGCCGCGCATCCGAG...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGGGAGGCGGTCTCGGATaGGCGGCTTGCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRGGGLG*AACAGS
Trigger: AGAACCTGCGCAAGCCGCGCATCCGAGACCGCCTCC...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp GTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTCTTATGCGCCAGGTTaGAGGCCCCGCTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: VFASGFLPNAVIMETGEGSYAPG*RPRSWR
Trigger: TCGCCAAGAGCGGGGCCTGCAACCTGGCGCATAAGA...GCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTCTCGCTCTCCCATGCTaGCGCGCGGGACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTLALPC*RAGPGA
Trigger: GGCCCCTGGTCCCGCGCGCCAGCATGGGAGAGCGAG...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTAGCGGGCGCGGCGGCTaGACCTCCTTGCACACGCCG +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTSGRGG*TSLHTP
Trigger: CGGCGTGTGCAAGGAGGTCCAGCCGCCGCGCCCGCT...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAATCCCTCGCTCTCCCATaGTGGCGCGCGGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKSLALP*WRAGPG
Trigger: CCCTGGTCCCGCGCGCCAGCATGGGAGAGCGAGGGA...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGCACCTCCCTCTCACCTaGCTCTCCGTCCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRHLPLT*LSVPGH
Trigger: GTGTCCAGGGACGGAGAGGCAGGTGAGAGGGAGGTG...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp AGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGGGTTCTCTGCGGCGATaGGCGCCAGCACATACTCCT +
Preference number: 4 (lower is better)
Translates to: SFCLRLPTKCSYHGDRRRGSLRR*APAHTP
Trigger: AGGAGTATGTGCTGGCGCGCATCGCCGCAGAGAACC...CCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGTCTTATGCGCCAGGTTaGAGGCCCCGCTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQESYAPG*RPRSWR
Trigger: TCGCCAAGAGCGGGGCCTGCAACCTGGCGCATAAGA...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGCCAGCTCTCGGGCACTaGACCGTGGAGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWPALGH*TVEQLL
Trigger: AAGTAGCTGCTCCACGGTGCAGTGCCCGAGAGCTGG...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp GTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCCACCTTGTCCAGCTCTaGCCAACAGGCCGCAATGAG +
Preference number: 4 (lower is better)
Translates to: VFASGFLPNAVIMETGEGHLVQL*PTGRNE
Trigger: CTCATTGCGGCCTGTTGGGCAGAGCTGGACAAGGTG...GCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGAGGGGGCTGCGTGTCCTaGAGAGCCAGCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LQESPTDKANELNPLTNRGGCVS*RASSFP
Trigger: TGGAAAGGAGCTGGCTCTGCAGGACACGCAGCCCCC...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667884.1
CDS-3UTR GCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGGGACAAATTGGGGGCTaGGTGTCCTGCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQEGQIGG*VSCRAS
Trigger: GCTGGCTCTGCAGGACACGCAGCCCCCAATTTGTCC...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000667884.1
CDS-3UTR GCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGAGGTTCTCTGCGGCGATaGGCGCCAGCACATACTCCT +
Preference number: 4 (lower is better)
Translates to: LQESPTDKANELNPLTNRGSLRR*APAHTP
Trigger: AGGAGTATGTGCTGGCGCGCATCGCCGCAGAGAACC...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACCAAATTTCTCGCTCTCCCATGCTaGCGCGCGGGACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: IWVSPTKHFKQTHFLTKFLALPC*RAGPGA
Trigger: GGCCCCTGGTCCCGCGCGCCAGCATGGGAGAGCGAG...AAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTAGGTTCTCTGCGGCGATaGGCGCCAGCACATACTCCT +
Preference number: 4 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLGSLRR*APAHTP
Trigger: AGGAGTATGTGCTGGCGCGCATCGCCGCAGAGAACC...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp GCATTTCAAACAGACTCATTTCTTGACCAAATTTTGTGCTCAAGGCCTGTTACTCTTGCGCAGGTTCTCTaGGGCGATGCGCGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AFQTDSFLDQILCSRPVTLAQVL*GDARQH
Trigger: GTGCTGGCGCGCATCGCCGCAGAGAACCTGCGCAAG...AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp GCATTTCAAACAGACTCATTTCTTGACCAAATTTTGTGCTCAAGGCCTGTTACTCTCGGATGCGCGGCTTaGGCAGGTTCTCTGCGGCGA +
Preference number: 4 (lower is better)
Translates to: AFQTDSFLDQILCSRPVTLGCAA*AGSLRR
Trigger: TCGCCGCAGAGAACCTGCGCAAGCCGCGCATCCGAG...AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp GTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGTCATACAGGGGACTaGGCTTGTCAATCACGTGGC +
Preference number: 4 (lower is better)
Translates to: VFASGFLPNAVIMETGEGCHTGD*ACQSRG
Trigger: GCCACGTGATTGACAAGCGCAGTCCCCTGTATGACA...GCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTACCAGCTCTCGGGCACTaGACCGTGGAGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLPALGH*TVEQLL
Trigger: AAGTAGCTGCTCCACGGTGCAGTGCCCGAGAGCTGG...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGAGGACAAATTGGGGGCTaGGTGTCCCCAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: LRETSIPTPAHNLSISLRGQIGG*VSPNRD
Trigger: GTCCCTGTTTGGGGACACGCAGCCCCCAATTTGTCC...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000665145.1
CDS-3UTR CCA 90 bp AGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAAGATGACCAGCGTGTaGCGCCATTTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SSFCLRLPTKCSYHGDRRKMTSV*RHFRST
Trigger: GGTGGACCTGAAATGGCGCCACACGCTGGTCATCTT...TCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp GTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCCCTCCAAGTCTTGGTTaGCCAGGTCAGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VFASGFLPNAVIMETGEGPPSLG*PGQLLR
Trigger: TCTCAGCAACTGACCTGGCCAACCAAGACTTGGAGG...GCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp CTCTGGTTCAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACCTTCCTCAGTCACAATaGACACAAAGCGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LWFSLAVPSINRQNLIKDLPQSQ*TQSGGP
Trigger: GGGGCCACCGCTTTGTGTCCATTGTGACTGAGGAAG...GTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTGAACCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp GTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCCATACTCCTCCGGGATaGTACTCTTTCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: VFASGFLPNAVIMETGEGHTPPG*YSFWPT
Trigger: TGTTGGCCAGAAAGAGTATCATCCCGGAGGAGTATG...GCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGGGAATGTCCAGTTGGTaGATAGGAACCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQEGMSSW*IGTTSP
Trigger: AGGGGAGGTGGTTCCTATTCACCAACTGGACATTCC...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGCAATCACGTGGCAGATaGTCAAAGGGGCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQEQSRGR*SKGPPE
Trigger: TTCTGGTGGCCCCTTTGATCATCTGCCACGTGATTG...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp ATTTCCAGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTCTTATGCGCCAGGTTaGAGGCCCCGCTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: ISRVIISNTAIWVSPTKHSYAPG*RPRSWR
Trigger: TCGCCAAGAGCGGGGCCTGCAACCTGGCGCATAAGA...ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTAGCCGGAGGGACAAATTaGGGGCTGCGTGTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALAGGTN*GLRVLR
Trigger: CCTTAGGACACGCAGCCCCCAATTTGTCCCTCCGGC...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240662.3
CDS-3UTR CCA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACAATGGACACAAAGCGGTaGCCCCATTGGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTMDTKR*PHWISS
Trigger: TGAGGAGATCCAATGGGGCCACCGCTTTGTGTCCAT...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGATGGACACAAAGCGGTaGCCCCATTGGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQEMDTKR*PHWISS
Trigger: TGAGGAGATCCAATGGGGCCACCGCTTTGTGTCCAT...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGTCGGGCACTGCACCGTaGAGCAGCTACTTTAACAGT +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQESGTAP*SSYFNS
Trigger: ACTGTTAAAGTAGCTGCTCCACGGTGCAGTGCCCGA...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACATCGGGCACTGCACCGTaGAGCAGCTACTTTAACAGT +
Preference number: 4 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTSGTAP*SSYFNS
Trigger: ACTGTTAAAGTAGCTGCTCCACGGTGCAGTGCCCGA...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGCAGGCCGCAATGAGATaGACCAGGAAACCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWQAAMR*TRKPSG
Trigger: TCCTGAAGGTTTCCTGGTCCATCTCATTGCGGCCTG...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACACAGGCCGCAATGAGATaGACCAGGAAACCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTQAAMR*TRKPSG
Trigger: TCCTGAAGGTTTCCTGGTCCATCTCATTGCGGCCTG...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGTCACAGCATGGCGGCTaGAAATCAAAGTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWSQHGG*KSKFLP
Trigger: GGGCAGAAACTTTGATTTTCAGCCGCCATGCTGTGA...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp CTCTGGTTCAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTCACAGCATGGCGGCTaGAAATCAAAGTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LWFSLAVPSINRQNLIKDSQHGG*KSKFLP
Trigger: GGGCAGAAACTTTGATTTTCAGCCGCCATGCTGTGA...GTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTGAACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGACACCCACTCGGAACATaGAGCACAGCTTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: LQESPTDKANELNPLTNRHPLGT*STACHF
Trigger: GAAATGGCAAGCTGTGCTTCATGTTCCGAGTGGGTG...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTAGGCCAGGTCAGTTGCTaGGATGTCATACAGGGGACT +
Preference number: 4 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLGQVSC*DVIQGT
Trigger: AGTCCCCTGTATGACATCTCAGCAACTGACCTGGCC...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTGGCCAGGTCAGTTGCTaGGATGTCATACAGGGGACT +
Preference number: 4 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSGQVSC*DVIQGT
Trigger: AGTCCCCTGTATGACATCTCAGCAACTGACCTGGCC...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp ATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACCAAATTTCTTGCGCAGGTTCTCTaGGGCGATGCGCGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: IWVSPTKHFKQTHFLTKFLAQVL*GDARQH
Trigger: GTGCTGGCGCGCATCGCCGCAGAGAACCTGCGCAAG...AAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGTGTCATACAGGGGACTaGGCTTGTCAATCACGTGGC +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRCHTGD*ACQSRG
Trigger: GCCACGTGATTGACAAGCGCAGTCCCCTGTATGACA...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTCCAGCTCTCGGGCACTaGACCGTGGAGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTPALGH*TVEQLL
Trigger: AAGTAGCTGCTCCACGGTGCAGTGCCCGAGAGCTGG...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCCACCTTGTCCAGCTCTaGCCAACAGGCCGCAATGAG +
Preference number: 4 (lower is better)
Translates to: ISVILVFQIERNEHTHPCHLVQL*PTGRNE
Trigger: CTCATTGCGGCCTGTTGGGCAGAGCTGGACAAGGTG...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGACGCTTGTCAATCACGTaGCAGATGATCAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LQESPTDKANELNPLTNRRLSIT*QMIKGA
Trigger: GGCCCCTTTGATCATCTGCCACGTGATTGACAAGCG...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGCCTCCAAGTCTTGGTTaGCCAGGTCAGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRPPSLG*PGQLLR
Trigger: TCTCAGCAACTGACCTGGCCAACCAAGACTTGGAGG...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACAATGACCTCCAAGTCTTaGTTGGCCAGGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTMTSKS*LARSVA
Trigger: AGCAACTGACCTGGCCAACCAAGACTTGGAGGTCAT...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTCTTCCTCAGTCACAATaGACACAAAGCGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSLPQSQ*TQSGGP
Trigger: GGGGCCACCGCTTTGTGTCCATTGTGACTGAGGAAG...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTACTTCCTCAGTCACAATaGACACAAAGCGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLLPQSQ*TQSGGP
Trigger: GGGGCCACCGCTTTGTGTCCATTGTGACTGAGGAAG...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGACATACTCCTCCGGGATaGTACTCTTTCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: LRETSIPTPAHNLSISLRHTPPG*YSFWPT
Trigger: TGTTGGCCAGAAAGAGTATCATCCCGGAGGAGTATG...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGAGGAGAATCAAAACCGTaGTGGCCAAAGGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: LRETSIPTPAHNLSISLRGESKP*WPKGIP
Trigger: AGGAATGCCCTTTGGCCATCACGGTTTTGATTCTCC...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGGGAGAATCAAAACCGTaGTGGCCAAAGGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRGESKP*WPKGIP
Trigger: AGGAATGCCCTTTGGCCATCACGGTTTTGATTCTCC...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTCAATCACGTGGCAGATaGTCAAAGGGGCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSQSRGR*SKGPPE
Trigger: TTCTGGTGGCCCCTTTGATCATCTGCCACGTGATTG...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTAGGCCAGGTCAGTTGCTaGGATGTCATACAGGGGACT +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALGQVSC*DVIQGT
Trigger: AGTCCCCTGTATGACATCTCAGCAACTGACCTGGCC...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATTTCCAGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATCCCAACAGGCCGCAATaGGATGGACCAGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: ISRVIISNTAIWVSPTKHPNRPQ*DGPGNL
Trigger: AAGGTTTCCTGGTCCATCTCATTGCGGCCTGTTGGG...ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCCCCAACAGGCCGCAATaGGATGGACCAGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: ISVILVFQIERNEHTHPCPNRPQ*DGPGNL
Trigger: AAGGTTTCCTGGTCCATCTCATTGCGGCCTGTTGGG...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATCACCTTGTCCAGCTCTaGCCAACAGGCCGCAATGAG +
Preference number: 4 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHHLVQL*PTGRNE
Trigger: CTCATTGCGGCCTGTTGGGCAGAGCTGGACAAGGTG...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCAAGATGACCAGCGTGTaGCGCCATTTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: ISVILVFQIERNEHTHPCKMTSV*RHFRST
Trigger: GGTGGACCTGAAATGGCGCCACACGCTGGTCATCTT...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTCCTCCAAGTCTTGGTTaGCCAGGTCAGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSPPSLG*PGQLLR
Trigger: TCTCAGCAACTGACCTGGCCAACCAAGACTTGGAGG...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTCAGGCCGCAATGAGATaGACCAGGAAACCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSQAAMR*TRKPSG
Trigger: TCCTGAAGGTTTCCTGGTCCATCTCATTGCGGCCTG...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACCAAATTTGCCGGAGGGACAAATTaGGGGCTGCGTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: IWVSPTKHFKQTHFLTKFAGGTN*GLRVLQ
Trigger: CTGCAGGACACGCAGCCCCCAATTTGTCCCTCCGGC...AAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667884.1
CDS-3UTR TCA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTACATACTCCTCCGGGATaGTACTCTTTCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLHTPPG*YSFWPT
Trigger: TGTTGGCCAGAAAGAGTATCATCCCGGAGGAGTATG...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTACACCCACTCGGAACATaGAGCACAGCTTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALHPLGT*STACHF
Trigger: GAAATGGCAAGCTGTGCTTCATGTTCCGAGTGGGTG...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTAGGAATGTCCAGTTGGTaGATAGGAACCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALGMSSW*IGTTSP
Trigger: AGGGGAGGTGGTTCCTATTCACCAACTGGACATTCC...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCCAATCACGTGGCAGATaGTCAAAGGGGCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: ISVILVFQIERNEHTHPCQSRGR*SKGPPE
Trigger: TTCTGGTGGCCCCTTTGATCATCTGCCACGTGATTG...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGCTCTTTTGGAGGGTCTaGATAAGGATGGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWLFWRV*IRMEGF
Trigger: GAAACCTTCCATCCTTATTCAGACCCTCCAAAAGAG...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGGCACCTTTGGTACCATaGGGGAAGAATTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRAPLVP*GKNCSF
Trigger: GAAGGAACAATTCTTCCCTCATGGTACCAAAGGTGC...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGAGCACCTTTGGTACCATaGGGGAAGAATTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQESPTDKANELNPLTNRAPLVP*GKNCSF
Trigger: GAAGGAACAATTCTTCCCTCATGGTACCAAAGGTGC...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATCCCAACAGGCCGCAATaGGATGGACCAGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHPNRPQ*DGPGNL
Trigger: AAGGTTTCCTGGTCCATCTCATTGCGGCCTGTTGGG...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp ATTTCCAGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTGTCATACAGGGGACTaGGCTTGTCAATCACGTGGC +
Preference number: 4 (lower is better)
Translates to: ISRVIISNTAIWVSPTKHCHTGD*ACQSRG
Trigger: GCCACGTGATTGACAAGCGCAGTCCCCTGTATGACA...ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAATGTAGGAGGTTCGTaGTTGTGTGGTGATGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRNVGGS*LCGDAS
Trigger: ACTGGCATCACCACACAAGCACGAACCTCCTACATT...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGAAATGTAGGAGGTTCGTaGTTGTGTGGTGATGCCAGT +
Preference number: 4 (lower is better)
Translates to: LQESPTDKANELNPLTNRNVGGS*LCGDAS
Trigger: ACTGGCATCACCACACAAGCACGAACCTCCTACATT...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGAGGCTTCCTACCAAATaGAGTTATCATGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWRLPTK*SYHGDR
Trigger: CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCT...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAAAAGATGACCAGCGTGTaGCGCCATTTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKKMTSV*RHFRST
Trigger: GGTGGACCTGAAATGGCGCCACACGCTGGTCATCTT...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp AGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAACGGCAATCACAGCATaGCGGCTGAAAATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SSFCLRLPTKCSYHGDRRTAITA*RLKIKV
Trigger: AACTTTGATTTTCAGCCGCCATGCTGTGATTGCCGT...TCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTGTTTTCTTGACCACCTaGATGCGCACAGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSVFLTT*MRTEAL
Trigger: TAGTGCCTCTGTGCGCATCCAGGTGGTCAAGAAAAC...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTACGCTTGTCAATCACGTaGCAGATGATCAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALRLSIT*QMIKGA
Trigger: GGCCCCTTTGATCATCTGCCACGTGATTGACAAGCG...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCTCGGGCACTGCACCGTaGAGCAGCTACTTTAACAGT +
Preference number: 4 (lower is better)
Translates to: ISVILVFQIERNEHTHPCSGTAP*SSYFNS
Trigger: ACTGTTAAAGTAGCTGCTCCACGGTGCAGTGCCCGA...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAAGGTCCACCAAGGTGGTaGAGATGTCCTGTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKGPPRW*RCPVES
Trigger: GCTTTCTACAGGACATCTTCACCACCTTGGTGGACC...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTAGGAGAATCAAAACCGTaGTGGCCAAAGGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALGESKP*WPKGIP
Trigger: AGGAATGCCCTTTGGCCATCACGGTTTTGATTCTCC...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTCACCCACTCGGAACATaGAGCACAGCTTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTHPLGT*STACHF
Trigger: GAAATGGCAAGCTGTGCTTCATGTTCCGAGTGGGTG...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTGGAATGTCCAGTTGGTaGATAGGAACCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTGMSSW*IGTTSP
Trigger: AGGGGAGGTGGTTCCTATTCACCAACTGGACATTCC...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGCTCTTTTGGAGGGTCTaGATAAGGATGGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRLFWRV*IRMEGF
Trigger: GAAACCTTCCATCCTTATTCAGACCCTCCAAAAGAG...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAACAAGCATAAGCCATaGATCCTCCACTTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRNKHKP*ILHLVC
Trigger: ACACACCAAGTGGAGGATTCATGGCTTATGCTTGTT...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp GTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCGACAGACAAAGCGAATaGACTGAATCCACTTACAAA +
Preference number: 4 (lower is better)
Translates to: VFASGFLPNAVIMETGEGDRQSE*TESTYK
Trigger: TTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTC...GCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGATGTAGAAAGCGTCCTTaGTCACGGATGTTCTTATGC +
Preference number: 4 (lower is better)
Translates to: LRETSIPTPAHNLSISLRCRKRP*SRMFLC
Trigger: GCATAAGAACATCCGTGAGCAAGGACGCTTTCTACA...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGGCTTCCTACCAAATaGAGTTATCATGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRRLPTK*SYHGDR
Trigger: CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCT...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATTTCCAGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATGTTTTCTTGACCACCTaGATGCGCACAGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: ISRVIISNTAIWVSPTKHVFLTT*MRTEAL
Trigger: TAGTGCCTCTGTGCGCATCCAGGTGGTCAAGAAAAC...ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTAATGACCTCCAAGTCTTaGTTGGCCAGGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALMTSKS*LARSVA
Trigger: AGCAACTGACCTGGCCAACCAAGACTTGGAGGTCAT...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTATGGACACAAAGCGGTaGCCCCATTGGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTMDTKR*PHWISS
Trigger: TGAGGAGATCCAATGGGGCCACCGCTTTGTGTCCAT...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGAATTGTTTCTTCTCATaGAGTTGCGCTTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWNCFFS*SCASSE
Trigger: CTCTGAGGAAGCGCAACTCCATGAGAAGAAACAATT...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAATTGTTTCTTCTCATaGAGTTGCGCTTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQENCFFS*SCASSE
Trigger: CTCTGAGGAAGCGCAACTCCATGAGAAGAAACAATT...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAATCACAGCATGGCGGCTaGAAATCAAAGTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKSQHGG*KSKFLP
Trigger: GGGCAGAAACTTTGATTTTCAGCCGCCATGCTGTGA...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGTCTTGTGTTTCAAATTaGGAGAAACGAGCATACCCA +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQESCVSN*EKRAYP
Trigger: TGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGA...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGGACAGACAAAGCGAATaGACTGAATCCACTTACAAA +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWDRQSE*TESTYK
Trigger: TTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTC...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp AGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAGACAGACAAAGCGAATaGACTGAATCCACTTACAAA +
Preference number: 4 (lower is better)
Translates to: SSFCLRLPTKCSYHGDRRDRQSE*TESTYK
Trigger: TTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTC...TCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTAGAAAATCAAAGTTTCTaGCCTTCTGTGAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLENQSF*PSVSLS
Trigger: GCTCAGGCTCACAGAAGGGCAGAAACTTTGATTTTC...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGATCTGGAGTCATAAATTaGACCTTTGGTACCATGAGG +
Preference number: 4 (lower is better)
Translates to: LQESPTDKANELNPLTNRSGVIN*TFGTMR
Trigger: CCTCATGGTACCAAAGGTGCAATTTATGACTCCAGA...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGTCTGGAGTCATAAATTaGACCTTTGGTACCATGAGG +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRSGVIN*TFGTMR
Trigger: CCTCATGGTACCAAAGGTGCAATTTATGACTCCAGA...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGATCTGGAGTCATAAATTaGACCTTTGGTACCATGAGG +
Preference number: 4 (lower is better)
Translates to: LRETSIPTPAHNLSISLRSGVIN*TFGTMR
Trigger: CCTCATGGTACCAAAGGTGCAATTTATGACTCCAGA...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTAAGGCTTCCTACCAAATaGAGTTATCATGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLRLPTK*SYHGDR
Trigger: CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCT...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGTCCTCAGTAATTGGTTaGTTTCTGAAATGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWSSVIG*FLKCCS
Trigger: GCTGCAACATTTCAGAAAGCAACCAATTACTGAGGA...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665145.1
CDS-3UTR CCA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTAACGGCAATCACAGCATaGCGGCTGAAAATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLTAITA*RLKIKV
Trigger: AACTTTGATTTTCAGCCGCCATGCTGTGATTGCCGT...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTACGGCAATCACAGCATaGCGGCTGAAAATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSTAITA*RLKIKV
Trigger: AACTTTGATTTTCAGCCGCCATGCTGTGATTGCCGT...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAAGTTTTCTTGACCACCTaGATGCGCACAGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKVFLTT*MRTEAL
Trigger: TAGTGCCTCTGTGCGCATCCAGGTGGTCAAGAAAAC...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGGTTATTGCTCTCGATTaGGTTATCAACAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQEVIALD*VINRNV
Trigger: GACATTCCTGTTGATAACCCAATCGAGAGCAATAAC...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTATGACCTCCAAGTCTTaGTTGGCCAGGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTMTSKS*LARSVA
Trigger: AGCAACTGACCTGGCCAACCAAGACTTGGAGGTCAT...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACCAAATTTGGTCCACCAAGGTGGTaGAGATGTCCTGTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: IWVSPTKHFKQTHFLTKFGPPRW*RCPVES
Trigger: GCTTTCTACAGGACATCTTCACCACCTTGGTGGACC...AAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTACTCTTTTGGAGGGTCTaGATAAGGATGGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALLFWRV*IRMEGF
Trigger: GAAACCTTCCATCCTTATTCAGACCCTCCAAAAGAG...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATGCACCTTTGGTACCATaGGGGAAGAATTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHAPLVP*GKNCSF
Trigger: GAAGGAACAATTCTTCCCTCATGGTACCAAAGGTGC...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACAGTTATCTTGCTGTCATaGTTCCGATGTGTTTTGATT +
Preference number: 4 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTVILLS*FRCVLI
Trigger: AATCAAAACACATCGGAATCATGACAGCAAGATAAC...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATTTCCAGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATAACAAGCATAAGCCATaGATCCTCCACTTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ISRVIISNTAIWVSPTKHNKHKP*ILHLVC
Trigger: ACACACCAAGTGGAGGATTCATGGCTTATGCTTGTT...ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp AGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGACAAAGCGAATGAACTaGATCCACTTACAAACAGAT +
Preference number: 4 (lower is better)
Translates to: SFCLRLPTKCSYHGDRRRTKRMN*IHLQTD
Trigger: ATCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGT...CCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGACAAAGCGAATGAACTaGATCCACTTACAAACAGAT +
Preference number: 4 (lower is better)
Translates to: KQFLPQASYQMQLSWRQETKRMN*IHLQTD
Trigger: ATCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGT...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp CTCTGGTTCAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACACAAAGCGAATGAACTaGATCCACTTACAAACAGAT +
Preference number: 4 (lower is better)
Translates to: LWFSLAVPSINRQNLIKDTKRMN*IHLQTD
Trigger: ATCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGT...GTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTGAACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCTGTAGAAAGCGTCCTTaGTCACGGATGTTCTTATGC +
Preference number: 4 (lower is better)
Translates to: ISVILVFQIERNEHTHPCCRKRP*SRMFLC
Trigger: GCATAAGAACATCCGTGAGCAAGGACGCTTTCTACA...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAAAATGTAGGAGGTTCGTaGTTGTGTGGTGATGCCAGT +
Preference number: 4 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKNVGGS*LCGDAS
Trigger: ACTGGCATCACCACACAAGCACGAACCTCCTACATT...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTAGTCTTGGGGTTATCTTaGTGTCATGATTCCGATGTG +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALVLGLS*CHDSDV
Trigger: CACATCGGAATCATGACAGCAAGATAACCCCAAGAC...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGAAACCCACAATATTCTaGAGAATCAAAACCGTGATG +
Preference number: 4 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWKPTIF*RIKTVM
Trigger: CATCACGGTTTTGATTCTCCAGAATATTGTGGGTTT...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGAGTTATTGCTCTCGATTaGGTTATCAACAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: LRETSIPTPAHNLSISLRVIALD*VINRNV
Trigger: GACATTCCTGTTGATAACCCAATCGAGAGCAATAAC...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACACATAAATTGCACCTTTaGTACCATGAGGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTHKLHL*YHEGRI
Trigger: AATTCTTCCCTCATGGTACCAAAGGTGCAATTTATG...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGAGATAAAAGACTGTCTTaGGGTTATCTTGCTGTCATG +
Preference number: 4 (lower is better)
Translates to: LRETSIPTPAHNLSISLRDKRLS*GYLAVM
Trigger: CATGACAGCAAGATAACCCCAAGACAGTCTTTTATC...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGAGATAAAAGACTGTCTTaGGGTTATCTTGCTGTCATG +
Preference number: 4 (lower is better)
Translates to: LQESPTDKANELNPLTNRDKRLS*GYLAVM
Trigger: CATGACAGCAAGATAACCCCAAGACAGTCTTTTATC...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATAACAAGCATAAGCCATaGATCCTCCACTTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHNKHKP*ILHLVC
Trigger: ACACACCAAGTGGAGGATTCATGGCTTATGCTTGTT...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTTGTAGAAAGCGTCCTTaGTCACGGATGTTCTTATGC +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTCRKRP*SRMFLC
Trigger: GCATAAGAACATCCGTGAGCAAGGACGCTTTCTACA...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTGAAAATCAAAGTTTCTaGCCTTCTGTGAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTENQSF*PSVSLS
Trigger: GCTCAGGCTCACAGAAGGGCAGAAACTTTGATTTTC...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp GCATTTCAAACAGACTCATTTCTTGACCAAATTTTGTGCTCAAGGCCTGTTACTGTCTTGGGGTTATCTTaGTGTCATGATTCCGATGTG +
Preference number: 4 (lower is better)
Translates to: AFQTDSFLDQILCSRPVTVLGLS*CHDSDV
Trigger: CACATCGGAATCATGACAGCAAGATAACCCCAAGAC...AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGAAAACCCACAATATTCTaGAGAATCAAAACCGTGATG +
Preference number: 4 (lower is better)
Translates to: LRETSIPTPAHNLSISLRKPTIF*RIKTVM
Trigger: CATCACGGTTTTGATTCTCCAGAATATTGTGGGTTT...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTAAATTGTTTCTTCTCATaGAGTTGCGCTTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALNCFFS*SCASSE
Trigger: CTCTGAGGAAGCGCAACTCCATGAGAAGAAACAATT...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGCATAAATTGCACCTTTaGTACCATGAGGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRHKLHL*YHEGRI
Trigger: AATTCTTCCCTCATGGTACCAAAGGTGCAATTTATG...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTGATAAAAGACTGTCTTaGGGTTATCTTGCTGTCATG +
Preference number: 4 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSDKRLS*GYLAVM
Trigger: CATGACAGCAAGATAACCCCAAGACAGTCTTTTATC...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATTTCCAGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATAGTAACACAGCGATCTaGGTTTCACCAACTAAGCAT +
Preference number: 4 (lower is better)
Translates to: ISRVIISNTAIWVSPTKHSNTAI*VSPTKH
Trigger: ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACT...ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGACATGAATCCTCCACTTaGTGTGTTACTTTTTATTAC +
Preference number: 4 (lower is better)
Translates to: LQESPTDKANELNPLTNRHESST*CVTFYY
Trigger: GTAATAAAAAGTAACACACCAAGTGGAGGATTCATG...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATAGTAACACAGCGATCTaGGTTTCACCAACTAAGCAT +
Preference number: 4 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHSNTAI*VSPTKH
Trigger: ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACT...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATGATTCCGATGTGTTTTaGTTTCCTTCTGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHDSDVF*FPSGVI
Trigger: TATGACTCCAGAAGGAAATCAAAACACATCGGAATC...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTGATTCCGATGTGTTTTaGTTTCCTTCTGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTDSDVF*FPSGVI
Trigger: TATGACTCCAGAAGGAAATCAAAACACATCGGAATC...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAAGATTCCGATGTGTTTTaGTTTCCTTCTGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKDSDVF*FPSGVI
Trigger: TATGACTCCAGAAGGAAATCAAAACACATCGGAATC...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR TCA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCGTTATCTTGCTGTCATaGTTCCGATGTGTTTTGATT +
Preference number: 4 (lower is better)
Translates to: ISVILVFQIERNEHTHPCVILLS*FRCVLI
Trigger: AATCAAAACACATCGGAATCATGACAGCAAGATAAC...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp ATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACCAAATTTGTCTTGGGGTTATCTTaGTGTCATGATTCCGATGTG +
Preference number: 4 (lower is better)
Translates to: IWVSPTKHFKQTHFLTKFVLGLS*CHDSDV
Trigger: CACATCGGAATCATGACAGCAAGATAACCCCAAGAC...AAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTACTTGACCAAATTTTGTaGTCAAGGCCTGTTACTATT +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALLDQIL*SRPVTI
Trigger: AATAGTAACAGGCCTTGAGCACAAAATTTGGTCAAG...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCCTTGACCAAATTTTGTaGTCAAGGCCTGTTACTATT +
Preference number: 4 (lower is better)
Translates to: ISVILVFQIERNEHTHPCLDQIL*SRPVTI
Trigger: AATAGTAACAGGCCTTGAGCACAAAATTTGGTCAAG...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp GCATTTCAAACAGACTCATTTCTTGACCAAATTTTGTGCTCAAGGCCTGTTACTTGCTTTCTGAAATGTTaGAGCTTCTTCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: AFQTDSFLDQILCSRPVTCFLKC*SFFLCL
Trigger: TAGACAGAGGAAGAAGCTGCAACATTTCAGAAAGCA...AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665145.1
CDS-3UTR CCA 90 bp ATTTCCAGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATAAACCCACAATATTCTaGAGAATCAAAACCGTGATG +
Preference number: 4 (lower is better)
Translates to: ISRVIISNTAIWVSPTKHKPTIF*RIKTVM
Trigger: CATCACGGTTTTGATTCTCCAGAATATTGTGGGTTT...ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAAGTTATTGCTCTCGATTaGGTTATCAACAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKVIALD*VINRNV
Trigger: GACATTCCTGTTGATAACCCAATCGAGAGCAATAAC...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATTTCCAGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATCATAAATTGCACCTTTaGTACCATGAGGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: ISRVIISNTAIWVSPTKHHKLHL*YHEGRI
Trigger: AATTCTTCCCTCATGGTACCAAAGGTGCAATTTATG...ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTTCGGTCCTCAGTAATTaGTTGCTTTCTGAAATGTTG +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTSVLSN*LLSEML
Trigger: CAACATTTCAGAAAGCAACCAATTACTGAGGACCGA...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665145.1
CDS-3UTR GCA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTCTTGACCAAATTTTGTaGTCAAGGCCTGTTACTATT +
Preference number: 4 (lower is better)
Translates to: FYMYETSISHESSTWCVTLDQIL*SRPVTI
Trigger: AATAGTAACAGGCCTTGAGCACAAAATTTGGTCAAG...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATCCCTCCTATTCTATTTaGATTTCCAGAGTGATCATT +
Preference number: 4 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHPSYSI*ISRVII
Trigger: AATGATCACTCTGGAAATGCAAATAGAATAGGAGGG...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACCCTCCTATTCTATTTaGATTTCCAGAGTGATCATT +
Preference number: 4 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKPSYSI*ISRVII
Trigger: AATGATCACTCTGGAAATGCAAATAGAATAGGAGGG...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR GCA 90 bp GCATTTCAAACAGACTCATTTCTTGACCAAATTTTGTGCTCAAGGCCTGTTACTCCCTCCTATTCTATTTaGATTTCCAGAGTGATCATT +
Preference number: 4 (lower is better)
Translates to: AFQTDSFLDQILCSRPVTPSYSI*ISRVII
Trigger: AATGATCACTCTGGAAATGCAAATAGAATAGGAGGG...AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTACATGAATCCTCCACTTaGTGTGTTACTTTTTATTAC +
Preference number: 4 (lower is better)
Translates to: YQMQLSWRQEKADVQNALHESST*CVTFYY
Trigger: GTAATAAAAAGTAACACACCAAGTGGAGGATTCATG...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CCA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCCATGAATCCTCCACTTaGTGTGTTACTTTTTATTAC +
Preference number: 4 (lower is better)
Translates to: ISVILVFQIERNEHTHPCHESST*CVTFYY
Trigger: GTAATAAAAAGTAACACACCAAGTGGAGGATTCATG...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
3UTR CAA 72 bp GTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTaGACCAAATTTTGTGCTCAAGGCCTGTTACTATTA +
Preference number: 4 (lower is better)
Translates to: VSPTKHFKQTHF*TKFCAQGLLLL
Trigger: TAATAGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS GCA 90 bp CCTTGCACACGCCGGCGGGCCGCGGGCAGGTCCCTCGCTCTCCCATaGTGGCGCGCGGGACCAGGGGCCGCCCAGGCCGGAGGGACAAAT +
Preference number: 5 (lower is better)
Translates to: PCTRRRAAGRSLALP*WRAGPGAAQAGGTN
Trigger: ATTTGTCCCTCCGGCCTGGGCGGCCCCTGGTCCCGCGCGCCAGCATGGGAGAGCGAGGGACCTGCCCGCGGCCCGCCGGCGTGTGCAAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS CCA 90 bp TGCACACGCCGGCGGGCCGCGGGCAGGTCCCTCGCTCTCCCATGCTaGCGCGCGGGACCAGGGGCCGCCCAGGCCGGAGGGACAAATTGG +
Preference number: 5 (lower is better)
Translates to: CTRRRAAGRSLALPC*RAGPGAAQAGGTNW
Trigger: CCAATTTGTCCCTCCGGCCTGGGCGGCCCCTGGTCCCGCGCGCCAGCATGGGAGAGCGAGGGACCTGCCCGCGGCCCGCCGGCGTGTGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS GCA 90 bp ACATCGTCCTGTCACCATAGCCAGCTTAGCCACCTCCCTCTCACCTaGCTCTCCGTCCCTGGACACCCGTCCTCCCCAAACAGGGACGGC +
Preference number: 5 (lower is better)
Translates to: TSSCHHSQLSHLPLT*LSVPGHPSSPNRDG
Trigger: GCCGTCCCTGTTTGGGGAGGACGGGTGTCCAGGGACGGAGAGGCAGGTGAGAGGGAGGTGGCTAAGCTGGCTATGGTGACAGGACGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537950.1
CDS TCA 90 bp GCAGGTTCTCTGCGGCGATGCGCGCCAGCACATACTCCTCCGGGATaGTACTCTTTCTGGCCAACATCGTCCTGTCACCATAGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: AGSLRRCAPAHTPPG*YSFWPTSSCHHSQL
Trigger: AAGCTGGCTATGGTGACAGGACGATGTTGGCCAGAAAGAGTATCATCCCGGAGGAGTATGTGCTGGCGCGCATCGCCGCAGAGAACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240662.3
ENST00000537950.1
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGTCTCGGATGCGCGGCTaGCGCAGGTTCTCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWSRMRG*RRFSAA
Trigger: CGCCGCAGAGAACCTGCGCAAGCCGCGCATCCGAGA...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGATCTCGGATGCGCGGCTaGCGCAGGTTCTCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: SSFCLRLPTKCSYHGDRRSRMRG*RRFSAA
Trigger: CGCCGCAGAGAACCTGCGCAAGCCGCGCATCCGAGA...TCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp GTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCGGCCGGAGGGACAAATaGGGGGCTGCGTGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: VFASGFLPNAVIMETGEGGRRDK*GAACPA
Trigger: TGCAGGACACGCAGCCCCCAATTTGTCCCTCCGGCC...GCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000667884.1
CDS-3UTR CAA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTCTCGGATGCGCGGCTaGCGCAGGTTCTCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSSRMRG*RRFSAA
Trigger: CGCCGCAGAGAACCTGCGCAAGCCGCGCATCCGAGA...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGAGCGATGAAGCGGGCTTaGGGGAGGCGGTCTCGGATG +
Preference number: 5 (lower is better)
Translates to: LQESPTDKANELNPLTNRAMKRA*GRRSRM
Trigger: CATCCGAGACCGCCTCCCCAAAGCCCGCTTCATCGC...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGATTCTTATGCGCCAGGTaGCAGGCCCCGCTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: SSFCLRLPTKCSYHGDRRFLCAR*QAPLLA
Trigger: CGCCAAGAGCGGGGCCTGCAACCTGGCGCATAAGAA...TCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGATTCTTATGCGCCAGGTaGCAGGCCCCGCTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LQESPTDKANELNPLTNRFLCAR*QAPLLA
Trigger: CGCCAAGAGCGGGGCCTGCAACCTGGCGCATAAGAA...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGATTCTTATGCGCCAGGTaGCAGGCCCCGCTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LRETSIPTPAHNLSISLRFLCAR*QAPLLA
Trigger: CGCCAAGAGCGGGGCCTGCAACCTGGCGCATAAGAA...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTGGCCGGAGGGACAAATaGGGGGCTGCGTGTCCTAAG +
Preference number: 5 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSGRRDK*GAACPK
Trigger: CTTAGGACACGCAGCCCCCAATTTGTCCCTCCGGCC...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000240662.3
CDS TCA 90 bp CAGAATAACTATGACCTCCAAGTCTTGGTTGGCCAGGTCAGTTGCTaGGATGTCATACAGGGGACTGCGCTTGTCAATCACGTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: QNNYDLQVLVGQVSC*DVIQGTALVNHVAD
Trigger: ATCTGCCACGTGATTGACAAGCGCAGTCCCCTGTATGACATCTCAGCAACTGACCTGGCCAACCAAGACTTGGAGGTCATAGTTATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CCA 90 bp GTAGTTTCAACCACTCCTTCCAGAATAACTATGACCTCCAAGTCTTaGTTGGCCAGGTCAGTTGCTGAGATGTCATACAGGGGACTGCGC +
Preference number: 5 (lower is better)
Translates to: VVSTTPSRITMTSKS*LARSVAEMSYRGLR
Trigger: GCGCAGTCCCCTGTATGACATCTCAGCAACTGACCTGGCCAACCAAGACTTGGAGGTCATAGTTATTCTGGAAGGAGTGGTTGAAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp GCATTTCAAACAGACTCATTTCTTGACCAAATTTTGTGCTCAAGGCCTGTTACTGGCCGGAGGGACAAATaGGGGGCTGCGTGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: AFQTDSFLDQILCSRPVTGRRDK*GAACPQ
Trigger: TTGGGGACACGCAGCCCCCAATTTGTCCCTCCGGCC...AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000665145.1
CDS-3UTR CAA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAATTGCAGGCCCCGCTCTaGGCGATGAAGCGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKLQAPL*AMKRAL
Trigger: CAAAGCCCGCTTCATCGCCAAGAGCGGGGCCTGCAA...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTTTGCAGGCCCCGCTCTaGGCGATGAAGCGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: FYMYETSISHESSTWCVTLQAPL*AMKRAL
Trigger: CAAAGCCCGCTTCATCGCCAAGAGCGGGGCCTGCAA...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTGCAGGCCCCGCTCTaGGCGATGAAGCGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHLQAPL*AMKRAL
Trigger: CAAAGCCCGCTTCATCGCCAAGAGCGGGGCCTGCAA...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp GTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCGGTGTAGTTGTTTTCTaGACCACCTGGATGCGCACA +
Preference number: 5 (lower is better)
Translates to: VFASGFLPNAVIMETGEGGVVVF*TTWMRT
Trigger: TGTGCGCATCCAGGTGGTCAAGAAAACAACTACACC...GCCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGATACAGGGGACTGCGCTaGTCAATCACGTGGCAGATG +
Preference number: 5 (lower is better)
Translates to: LRETSIPTPAHNLSISLRYRGLR*SITWQM
Trigger: CATCTGCCACGTGATTGACAAGCGCAGTCCCCTGTA...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGAAAGCGGTGGCCCCATaGGATCTCCTCAGCAATGTA +
Preference number: 5 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWKAVAP*DLLSNV
Trigger: TACATTGCTGAGGAGATCCAATGGGGCCACCGCTTT...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS CCA 90 bp ATTTGGAGTAATCCACAGAATACACTCCTTCTTCCTCAGTCACAATaGACACAAAGCGGTGGCCCCATTGGATCTCCTCAGCAATGTAGG +
Preference number: 5 (lower is better)
Translates to: IWSNPQNTLLLPQSQ*TQSGGPIGSPQQCR
Trigger: CCTACATTGCTGAGGAGATCCAATGGGGCCACCGCTTTGTGTCCATTGTGACTGAGGAAGAAGGAGTGTATTCTGTGGATTACTCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATACAGGGGACTGCGCTaGTCAATCACGTGGCAGATG +
Preference number: 5 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLYRGLR*SITWQM
Trigger: CATCTGCCACGTGATTGACAAGCGCAGTCCCCTGTA...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS CCA 90 bp AACACTTCAGCGCTGATAAGGCCAGGTCATTCGGTCCTCAGTAATTaGTTGCTTTCTGAAATGTTGCAGCTTCTTCCTCTGTCTAGATGG +
Preference number: 5 (lower is better)
Translates to: NTSALIRPGHSVLSN*LLSEMLQLLPLSRW
Trigger: CCATCTAGACAGAGGAAGAAGCTGCAACATTTCAGAAAGCAACCAATTACTGAGGACCGAATGACCTGGCCTTATCAGCGCTGAAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665145.1
CDS-3UTR CAA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGAAACATGAAGCACAGCTaGCCATTTCGGACGGCAATC +
Preference number: 5 (lower is better)
Translates to: LRETSIPTPAHNLSISLRNMKHS*PFRTAI
Trigger: GATTGCCGTCCGAAATGGCAAGCTGTGCTTCATGTT...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGGGTGTAGTTGTTTTCTaGACCACCTGGATGCGCACA +
Preference number: 5 (lower is better)
Translates to: LSSFCLRLPTKCSYHGDRGVVVF*TTWMRT
Trigger: TGTGCGCATCCAGGTGGTCAAGAAAACAACTACACC...CCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAACAGGAATGTCCAGTaGGTGAATAGGAACCACCTC +
Preference number: 5 (lower is better)
Translates to: SSFCLRLPTKCSYHGDRRNRNVQ*VNRNHL
Trigger: GAGGTGGTTCCTATTCACCAACTGGACATTCCTGTT...TCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCCACTTAAGCAGTTTTaGCCTCAGGCTTCCTACCAA +
Preference number: 5 (lower is better)
Translates to: SFCLRLPTKCSYHGDRRRPLKQF*PQASYQ
Trigger: TTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGG...CCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CTTCAGGAGTCACCGACAGACAAAGCGAATGAACTGAATCCACTTACAAACAGAAACAGGAATGTCCAGTaGGTGAATAGGAACCACCTC +
Preference number: 5 (lower is better)
Translates to: LQESPTDKANELNPLTNRNRNVQ*VNRNHL
Trigger: GAGGTGGTTCCTATTCACCAACTGGACATTCCTGTT...TCTGTTTGTAAGTGGATTCAGTTCATTCGCTTTGTCTGTCGGTGACTCCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTACAGGGGACTGCGCTaGTCAATCACGTGGCAGATG +
Preference number: 5 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHYRGLR*SITWQM
Trigger: CATCTGCCACGTGATTGACAAGCGCAGTCCCCTGTA...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCTATGACCTCCAAGTCTaGGTTGGCCAGGTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: ISVILVFQIERNEHTHPCYDLQV*VGQVSC
Trigger: GCAACTGACCTGGCCAACCAAGACTTGGAGGTCATA...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTAGTAGGAGGTTCGTGCTaGTGTGGTGATGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: YQMQLSWRQEKADVQNALVGGSC*CGDASS
Trigger: ACTACTGGCATCACCACACAAGCACGAACCTCCTAC...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTAAAAGCGGTGGCCCCATaGGATCTCCTCAGCAATGTA +
Preference number: 5 (lower is better)
Translates to: YQMQLSWRQEKADVQNALKAVAP*DLLSNV
Trigger: TACATTGCTGAGGAGATCCAATGGGGCCACCGCTTT...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS TCA 90 bp ATGTTATTGCTCTCGATTGGGTTATCAACAGGAATGTCCAGTTGGTaGATAGGAACCACCTCCCCTTCAGGTGTAGTTGTTTTCTTGACC +
Preference number: 5 (lower is better)
Translates to: MLLLSIGLSTGMSSW*IGTTSPSGVVVFLT
Trigger: GGTCAAGAAAACAACTACACCTGAAGGGGAGGTGGTTCCTATTCACCAACTGGACATTCCTGTTGATAACCCAATCGAGAGCAATAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTAAACAGGAATGTCCAGTaGGTGAATAGGAACCACCTC +
Preference number: 5 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLNRNVQ*VNRNHL
Trigger: GAGGTGGTTCCTATTCACCAACTGGACATTCCTGTT...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAATATGACCTCCAAGTCTaGGTTGGCCAGGTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKYDLQV*VGQVSC
Trigger: GCAACTGACCTGGCCAACCAAGACTTGGAGGTCATA...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTGTAGGAGGTTCGTGCTaGTGTGGTGATGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: FYMYETSISHESSTWCVTVGGSC*CGDASS
Trigger: ACTACTGGCATCACCACACAAGCACGAACCTCCTAC...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTAAAGCGGTGGCCCCATaGGATCTCCTCAGCAATGTA +
Preference number: 5 (lower is better)
Translates to: FYMYETSISHESSTWCVTKAVAP*DLLSNV
Trigger: TACATTGCTGAGGAGATCCAATGGGGCCACCGCTTT...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACATTCCTTCGGATAGAATaGTTCCTCCTCATGGAATTG +
Preference number: 5 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTFLRIE*FLLMEL
Trigger: CAATTCCATGAGGAGGAACAATTCTATCCGAAGGAA...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATGAGACAAGACTTAGCTTTCCTTCAAAGACACCTTGTCCAGCTCTGCCCAACATTCTGGAGTCATAAATaGCACCTTTGGTACCATGAG +
Preference number: 5 (lower is better)
Translates to: MRQDLAFLQRHLVQLCPTFWSHK*HLWYHE
Trigger: CTCATGGTACCAAAGGTGCAATTTATGACTCCAGAA...TGTTGGGCAGAGCTGGACAAGGTGTCTTTGAAGGAAAGCTAAGTCTTGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGACCCCTCCTATTCTATTaGCATTTCCAGAGTGATCAT +
Preference number: 5 (lower is better)
Translates to: SSFCLRLPTKCSYHGDRRPLLFY*HFQSDH
Trigger: ATGATCACTCTGGAAATGCAAATAGAATAGGAGGGG...TCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TACAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTCCACTTAAGCAGTTTTaGCCTCAGGCTTCCTACCAA +
Preference number: 5 (lower is better)
Translates to: YKQIHLSSFCLRLPTKCSPLKQF*PQASYQ
Trigger: TTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGG...ACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CTCTGGTTCAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACGTCCTCAGTAATTGGTaGCTTTCTGAAATGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LWFSLAVPSINRQNLIKDVLSNW*LSEMLQ
Trigger: CTGCAACATTTCAGAAAGCAACCAATTACTGAGGAC...GTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTGAACCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665145.1
CDS-3UTR CAA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGAAACCCAATGGTAACTaGAACTTCAATGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWKPNGN*NFNGEE
Trigger: CTCTTCTCCATTGAAGTTCAAGTTACCATTGGGTTT...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CAGTCTGGCAGTGCCCAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTGGCCTAACATGACTGCATaGATGATCAAACCCACAATA +
Preference number: 5 (lower is better)
Translates to: QSGSAQHKPSKLDKRLSWPNMTA*MIKPTI
Trigger: TATTGTGGGTTTGATCATCAATGCAGTCATGTTAGG...CCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTGGGCACTGCCAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAAAACATGAAGCACAGCTaGCCATTTCGGACGGCAATC +
Preference number: 5 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKNMKHS*PFRTAI
Trigger: GATTGCCGTCCGAAATGGCAAGCTGTGCTTCATGTT...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATAACATGAAGCACAGCTaGCCATTTCGGACGGCAATC +
Preference number: 5 (lower is better)
Translates to: ISNTAIWVSPTKHFKQTHNMKHS*PFRTAI
Trigger: GATTGCCGTCCGAAATGGCAAGCTGTGCTTCATGTT...ATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAAGGTGTAGTTGTTTTCTaGACCACCTGGATGCGCACA +
Preference number: 5 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKGVVVF*TTWMRT
Trigger: TGTGCGCATCCAGGTGGTCAAGAAAACAACTACACC...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGTGTTATTGCTCTCGATaGGGTTATCAACAGGAATGT +
Preference number: 5 (lower is better)
Translates to: KQFLPQASYQMQLSWRQECYCSR*GYQQEC
Trigger: ACATTCCTGTTGATAACCCAATCGAGAGCAATAACA...CTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTTCCTCAGAGAATTTaGATGAGACAGTTCACTCTT +
Preference number: 5 (lower is better)
Translates to: SFCLRLPTKCSYHGDRRRLPQRI*MRQFTL
Trigger: AAGAGTGAACTGTCTCATCAAAATTCTCTGAGGAAG...CCTTCTCCTGTCTCCATGATAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGATTCCTCCTCATGGAATaGTTTCTTCTCATGGAGTTG +
Preference number: 5 (lower is better)
Translates to: LRETSIPTPAHNLSISLRFLLME*FLLMEL
Trigger: CAACTCCATGAGAAGAAACAATTCCATGAGGAGGAA...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTACCACTTAAGCAGTTTTaGCCTCAGGCTTCCTACCAA +
Preference number: 5 (lower is better)
Translates to: YQMQLSWRQEKADVQNALPLKQF*PQASYQ
Trigger: TTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGG...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS TCA 90 bp AAGACTGTCTTGGGGTTATCTTGCTGTCATGATTCCGATGTGTTTTaGTTTCCTTCTGGAGTCATAAATTGCACCTTTGGTACCATGAGG +
Preference number: 5 (lower is better)
Translates to: KTVLGLSCCHDSDVF*FPSGVINCTFGTMR
Trigger: CCTCATGGTACCAAAGGTGCAATTTATGACTCCAGAAGGAAATCAAAACACATCGGAATCATGACAGCAAGATAACCCCAAGACAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACCAAATTTGTAGGAGGTTCGTGCTaGTGTGGTGATGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: IWVSPTKHFKQTHFLTKFVGGSC*CGDASS
Trigger: ACTACTGGCATCACCACACAAGCACGAACCTCCTAC...AAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTGAGAGAAACGAGCATACCCACCCCTGCACATAACTTAAGTATATCACTGCGAACCAGAAAAATGTTATaGCTCTCGATTGGGTTATCA +
Preference number: 5 (lower is better)
Translates to: LRETSIPTPAHNLSISLRTRKML*LSIGLS
Trigger: TGATAACCCAATCGAGAGCAATAACATTTTTCTGGT...TCGCAGTGATATACTTAAGTTATGTGCAGGGGTGGGTATGCTCGTTTCTCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp CAAACAGATCCACTTAAGCAGTTTTTGCCTCAGGCTTCCTACCAAATGCAGTTACTTCCTCAGAGAATTTaGATGAGACAGTTCACTCTT +
Preference number: 5 (lower is better)
Translates to: QTDPLKQFLPQASYQMQLLPQRI*MRQFTL
Trigger: AAGAGTGAACTGTCTCATCAAAATTCTCTGAGGAAG...TAACTGCATTTGGTAGGAAGCCTGAGGCAAAAACTGCTTAAGTGGATCTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TACCAAATGCAGTTATCATGGAGACAGGAGAAGGCTGATGTACAAAACGCATTATTCCTCCTCATGGAATaGTTTCTTCTCATGGAGTTG +
Preference number: 5 (lower is better)
Translates to: YQMQLSWRQEKADVQNALFLLME*FLLMEL
Trigger: CAACTCCATGAGAAGAAACAATTCCATGAGGAGGAA...TAATGCGTTTTGTACATCAGCCTTCTCCTGTCTCCATGATAACTGCATTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTTCCAGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCCTTCGGATAGAATaGTTCCTCCTCATGGAATTG +
Preference number: 5 (lower is better)
Translates to: ISRVIISNTAIWVSPTKHFLRIE*FLLMEL
Trigger: CAATTCCATGAGGAGGAACAATTCTATCCGAAGGAA...ATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCTGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCTTCCTTCGGATAGAATaGTTCCTCCTCATGGAATTG +
Preference number: 5 (lower is better)
Translates to: ISVILVFQIERNEHTHPCFLRIE*FLLMEL
Trigger: CAATTCCATGAGGAGGAACAATTCTATCCGAAGGAA...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS CCA 90 bp TTCCGATGTGTTTTGATTTCCTTCTGGAGTCATAAATTGCACCTTTaGTACCATGAGGGAAGAATTGTTCCTTCGGATAGAATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: FRCVLISFWSHKLHL*YHEGRIVPSDRIVP
Trigger: AGGAACAATTCTATCCGAAGGAACAATTCTTCCCTCATGGTACCAAAGGTGCAATTTATGACTCCAGAAGGAAATCAAAACACATCGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCAAACCCAATGGTAACTaGAACTTCAATGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: ISVILVFQIERNEHTHPCKPNGN*NFNGEE
Trigger: CTCTTCTCCATTGAAGTTCAAGTTACCATTGGGTTT...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCCTTCCTCAGAGAATTTaGATGAGACAGTTCACTCTT +
Preference number: 5 (lower is better)
Translates to: ISVILVFQIERNEHTHPCLPQRI*MRQFTL
Trigger: AAGAGTGAACTGTCTCATCAAAATTCTCTGAGGAAG...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAATTCTGGAGTCATAAATaGCACCTTTGGTACCATGAG +
Preference number: 5 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKFWSHK*HLWYHE
Trigger: CTCATGGTACCAAAGGTGCAATTTATGACTCCAGAA...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCTTTCTTGACCAAATTTaGTGCTCAAGGCCTGTTACT +
Preference number: 5 (lower is better)
Translates to: ISVILVFQIERNEHTHPCFLDQI*CSRPVT
Trigger: AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAA...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAACCCCTCCTATTCTATTaGCATTTCCAGAGTGATCAT +
Preference number: 5 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKPLLFY*HFQSDH
Trigger: ATGATCACTCTGGAAATGCAAATAGAATAGGAGGGG...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAAAAACCCAATGGTAACTaGAACTTCAATGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKKPNGN*NFNGEE
Trigger: CTCTTCTCCATTGAAGTTCAAGTTACCATTGGGTTT...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTTGTTATTGCTCTCGATaGGGTTATCAACAGGAATGT +
Preference number: 5 (lower is better)
Translates to: FYMYETSISHESSTWCVTCYCSR*GYQQEC
Trigger: ACATTCCTGTTGATAACCCAATCGAGAGCAATAACA...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp GCATTTCAAACAGACTCATTTCTTGACCAAATTTTGTGCTCAAGGCCTGTTACTTGTTATTGCTCTCGATaGGGTTATCAACAGGAATGT +
Preference number: 5 (lower is better)
Translates to: AFQTDSFLDQILCSRPVTCYCSR*GYQQEC
Trigger: ACATTCCTGTTGATAACCCAATCGAGAGCAATAACA...AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAATGAGTCTGTTTGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATTAGTGTAATTCTTGTGTTTCAAATTGAGAGAAACGAGCATACCCACCCCTGCACCAGAAAAATGTTATaGCTCTCGATTGGGTTATCA +
Preference number: 5 (lower is better)
Translates to: ISVILVFQIERNEHTHPCTRKML*LSIGLS
Trigger: TGATAACCCAATCGAGAGCAATAACATTTTTCTGGT...GCAGGGGTGGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAATTACACTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTTTCTTGTGTTTCAAATaGAGAGAAACGAGCATACCC +
Preference number: 5 (lower is better)
Translates to: FYMYETSISHESSTWCVTFLCFK*RETSIP
Trigger: GGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAA...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAATTCTTGTGTTTCAAATaGAGAGAAACGAGCATACCC +
Preference number: 5 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKFLCFK*RETSIP
Trigger: GGGTATGCTCGTTTCTCTCAATTTGAAACACAAGAA...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp AGAGTGATCATTAGTAACACAGCGATCTGGGTTTCACCAACTAAGCATTTCAAATTTCTTGACCAAATTTaGTGCTCAAGGCCTGTTACT +
Preference number: 5 (lower is better)
Translates to: RVIISNTAIWVSPTKHFKFLDQI*CSRPVT
Trigger: AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAA...TTTGAAATGCTTAGTTGGTGAAACCCAGATCGCTGTGTTACTAATGATCACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTTTTCTTGACCAAATTTaGTGCTCAAGGCCTGTTACT +
Preference number: 5 (lower is better)
Translates to: FYMYETSISHESSTWCVTFLDQI*CSRPVT
Trigger: AGTAACAGGCCTTGAGCACAAAATTTGGTCAAGAAA...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp TTCTACATGTATGAAACAAGCATAAGCCATGAATCCTCCACTTGGTGTGTTACTACCAGAAAAATGTTATaGCTCTCGATTGGGTTATCA +
Preference number: 5 (lower is better)
Translates to: FYMYETSISHESSTWCVTTRKML*LSIGLS
Trigger: TGATAACCCAATCGAGAGCAATAACATTTTTCTGGT...AGTAACACACCAAGTGGAGGATTCATGGCTTATGCTTGTTTCATACATGTAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACCAAATTTTTCTGGAGTCATAAATaGCACCTTTGGTACCATGAG +
Preference number: 5 (lower is better)
Translates to: IWVSPTKHFKQTHFLTKFFWSHK*HLWYHE
Trigger: CTCATGGTACCAAAGGTGCAATTTATGACTCCAGAA...AAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS-3UTR CAA 90 bp ATCTGGGTTTCACCAACTAAGCATTTCAAACAGACTCATTTCTTGACCAAATTTCCTAACATGACTGCATaGATGATCAAACCCACAATA +
Preference number: 5 (lower is better)
Translates to: IWVSPTKHFKQTHFLTKFPNMTA*MIKPTI
Trigger: TATTGTGGGTTTGATCATCAATGCAGTCATGTTAGG...AAATTTGGTCAAGAAATGAGTCTGTTTGAAATGCTTAGTTGGTGAAACCCAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS CAA 90 bp ACCCGTCCTCAGACTCCGGGTAGCGGGCGCGGCGGCTGGACCTCCTaGCACACGCCGGCGGGCCGCGGGCAGGTCCCTCGCTCTCCCATG +
Preference number: 6 (lower is better)
Translates to: TRPQTPGSGRGGWTS*HTPAGRGQVPRSPM
Trigger: CATGGGAGAGCGAGGGACCTGCCCGCGGCCCGCCGGCGTGTGCAAGGAGGTCCAGCCGCCGCGCCCGCTACCCGGAGTCTGAGGACGGGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240662.3
ENST00000665145.1
ENST00000667884.1
CDS GCA 72 bp AGCGGGCTTTGGGGAGGCGGTCTCGGATGCGCGGCTTaGGCAGGTTCTCTGCGGCGATGCGCGCCAGCACAT +
Preference number: 6 (lower is better)
Translates to: SGLWGGGLGCAA*AGSLRRCAPAH
Trigger: ATGTGCTGGCGCGCATCGCCGCAGAGAACCTGCGCAAGCCGCGCATCCGAGACCGCCTCCCCAAAGCCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240662.3
ENST00000537950.1
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 72 bp AAGCGGGCTTTGGGGAGGCGGTCTCGGATGCGCGGCTaGCGCAGGTTCTCTGCGGCGATGCGCGCCAGCACA +
Preference number: 6 (lower is better)
Translates to: KRALGRRSRMRG*RRFSAAMRAST
Trigger: TGTGCTGGCGCGCATCGCCGCAGAGAACCTGCGCAAGCCGCGCATCCGAGACCGCCTCCCCAAAGCCCGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240662.3
ENST00000537950.1
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 72 bp AGGTTGCAGGCCCCGCTCTTGGCGATGAAGCGGGCTTaGGGGAGGCGGTCTCGGATGCGCGGCTTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: RLQAPLLAMKRA*GRRSRMRGLRR
Trigger: CCTGCGCAAGCCGCGCATCCGAGACCGCCTCCCCAAAGCCCGCTTCATCGCCAAGAGCGGGGCCTGCAACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240662.3
ENST00000537950.1
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 90 bp TTGGCGATGAAGCGGGCTTTGGGGAGGCGGTCTCGGATGCGCGGCTaGCGCAGGTTCTCTGCGGCGATGCGCGCCAGCACATACTCCTCC +
Preference number: 6 (lower is better)
Translates to: LAMKRALGRRSRMRG*RRFSAAMRASTYSS
Trigger: GGAGGAGTATGTGCTGGCGCGCATCGCCGCAGAGAACCTGCGCAAGCCGCGCATCCGAGACCGCCTCCCCAAAGCCCGCTTCATCGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240662.3
ENST00000537950.1
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS TCA 72 bp CTGCGGCGATGCGCGCCAGCACATACTCCTCCGGGATaGTACTCTTTCTGGCCAACATCGTCCTGTCACCAT +
Preference number: 6 (lower is better)
Translates to: LRRCAPAHTPPG*YSFWPTSSCHH
Trigger: ATGGTGACAGGACGATGTTGGCCAGAAAGAGTATCATCCCGGAGGAGTATGTGCTGGCGCGCATCGCCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240662.3
ENST00000537950.1
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS TCA 72 bp CCAGCGTGTGGCGCCATTTCAGGTCCACCAAGGTGGTaGAGATGTCCTGTAGAAAGCGTCCTTGCTCACGGA +
Preference number: 6 (lower is better)
Translates to: PACGAISGPPRW*RCPVESVLAHG
Trigger: TCCGTGAGCAAGGACGCTTTCTACAGGACATCTTCACCACCTTGGTGGACCTGAAATGGCGCCACACGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240662.3
ENST00000537950.1
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 72 bp AGGTCAGTTGCTGAGATGTCATACAGGGGACTGCGCTaGTCAATCACGTGGCAGATGATCAAAGGGGCCACC +
Preference number: 6 (lower is better)
Translates to: RSVAEMSYRGLR*SITWQMIKGAT
Trigger: GGTGGCCCCTTTGATCATCTGCCACGTGATTGACAAGCGCAGTCCCCTGTATGACATCTCAGCAACTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS TCA 72 bp GCTTGCCATTTCGGACGGCAATCACAGCATGGCGGCTaGAAATCAAAGTTTCTGCCCTTCTGTGAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: ACHFGRQSQHGG*KSKFLPFCEPE
Trigger: CTCAGGCTCACAGAAGGGCAGAAACTTTGATTTTCAGCCGCCATGCTGTGATTGCCGTCCGAAATGGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS TCA 72 bp TATGACCTCCAAGTCTTGGTTGGCCAGGTCAGTTGCTaGGATGTCATACAGGGGACTGCGCTTGTCAATCAC +
Preference number: 6 (lower is better)
Translates to: YDLQVLVGQVSC*DVIQGTALVNH
Trigger: GTGATTGACAAGCGCAGTCCCCTGTATGACATCTCAGCAACTGACCTGGCCAACCAAGACTTGGAGGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 90 bp GTTTCAACCACTCCTTCCAGAATAACTATGACCTCCAAGTCTTGGTaGGCCAGGTCAGTTGCTGAGATGTCATACAGGGGACTGCGCTTG +
Preference number: 6 (lower is better)
Translates to: VSTTPSRITMTSKSW*ARSVAEMSYRGLRL
Trigger: CAAGCGCAGTCCCCTGTATGACATCTCAGCAACTGACCTGGCCAACCAAGACTTGGAGGTCATAGTTATTCTGGAAGGAGTGGTTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 72 bp ATAGGAACCACCTCCCCTTCAGGTGTAGTTGTTTTCTaGACCACCTGGATGCGCACAGAGGCACTAATGATC +
Preference number: 6 (lower is better)
Translates to: IGTTSPSGVVVF*TTWMRTEALMI
Trigger: GATCATTAGTGCCTCTGTGCGCATCCAGGTGGTCAAGAAAACAACTACACCTGAAGGGGAGGTGGTTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CCA 72 bp ACCACTCCTTCCAGAATAACTATGACCTCCAAGTCTTaGTTGGCCAGGTCAGTTGCTGAGATGTCATACAGG +
Preference number: 6 (lower is better)
Translates to: TTPSRITMTSKS*LARSVAEMSYR
Trigger: CCTGTATGACATCTCAGCAACTGACCTGGCCAACCAAGACTTGGAGGTCATAGTTATTCTGGAAGGAGTGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 72 bp ACTCCTTCCAGAATAACTATGACCTCCAAGTCTTGGTaGGCCAGGTCAGTTGCTGAGATGTCATACAGGGGA +
Preference number: 6 (lower is better)
Translates to: TPSRITMTSKSW*ARSVAEMSYRG
Trigger: TCCCCTGTATGACATCTCAGCAACTGACCTGGCCAACCAAGACTTGGAGGTCATAGTTATTCTGGAAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 90 bp ACTTCAGCGCTGATAAGGCCAGGTCATTCGGTCCTCAGTAATTGGTaGCTTTCTGAAATGTTGCAGCTTCTTCCTCTGTCTAGATGGGTC +
Preference number: 6 (lower is better)
Translates to: TSALIRPGHSVLSNW*LSEMLQLLPLSRWV
Trigger: GACCCATCTAGACAGAGGAAGAAGCTGCAACATTTCAGAAAGCAACCAATTACTGAGGACCGAATGACCTGGCCTTATCAGCGCTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665145.1
CDS TCA 72 bp CTCTCGATTGGGTTATCAACAGGAATGTCCAGTTGGTaGATAGGAACCACCTCCCCTTCAGGTGTAGTTGTT +
Preference number: 6 (lower is better)
Translates to: LSIGLSTGMSSW*IGTTSPSGVVV
Trigger: AACAACTACACCTGAAGGGGAGGTGGTTCCTATTCACCAACTGGACATTCCTGTTGATAACCCAATCGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 90 bp TGCACCTTTGGTACCATGAGGGAAGAATTGTTCCTTCGGATAGAATaGTTCCTCCTCATGGAATTGTTTCTTCTCATGGAGTTGCGCTTC +
Preference number: 6 (lower is better)
Translates to: CTFGTMREELFLRIE*FLLMELFLLMELRF
Trigger: GAAGCGCAACTCCATGAGAAGAAACAATTCCATGAGGAGGAACAATTCTATCCGAAGGAACAATTCTTCCCTCATGGTACCAAAGGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 90 bp CATGGAATTGTTTCTTCTCATGGAGTTGCGCTTCCTCAGAGAATTTaGATGAGACAGTTCACTCTTTTGGAGGGTCTGAATAAGGATGGA +
Preference number: 6 (lower is better)
Translates to: HGIVSSHGVALPQRI*MRQFTLLEGLNKDG
Trigger: TCCATCCTTATTCAGACCCTCCAAAAGAGTGAACTGTCTCATCAAAATTCTCTGAGGAAGCGCAACTCCATGAGAAGAAACAATTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 72 bp GTCATAAATTGCACCTTTGGTACCATGAGGGAAGAATaGTTCCTTCGGATAGAATTGTTCCTCCTCATGGAA +
Preference number: 6 (lower is better)
Translates to: VINCTFGTMREE*FLRIELFLLME
Trigger: TTCCATGAGGAGGAACAATTCTATCCGAAGGAACAATTCTTCCCTCATGGTACCAAAGGTGCAATTTATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 90 bp CCTTCTGGAGTCATAAATTGCACCTTTGGTACCATGAGGGAAGAATaGTTCCTTCGGATAGAATTGTTCCTCCTCATGGAATTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: PSGVINCTFGTMREE*FLRIELFLLMELFL
Trigger: AAGAAACAATTCCATGAGGAGGAACAATTCTATCCGAAGGAACAATTCTTCCCTCATGGTACCAAAGGTGCAATTTATGACTCCAGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CCA 72 bp GTTTTGATTTCCTTCTGGAGTCATAAATTGCACCTTTaGTACCATGAGGGAAGAATTGTTCCTTCGGATAGA +
Preference number: 6 (lower is better)
Translates to: VLISFWSHKLHL*YHEGRIVPSDR
Trigger: TCTATCCGAAGGAACAATTCTTCCCTCATGGTACCAAAGGTGCAATTTATGACTCCAGAAGGAAATCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CAA 72 bp TTCCGATGTGTTTTGATTTCCTTCTGGAGTCATAAATaGCACCTTTGGTACCATGAGGGAAGAATTGTTCCT +
Preference number: 6 (lower is better)
Translates to: FRCVLISFWSHK*HLWYHEGRIVP
Trigger: AGGAACAATTCTTCCCTCATGGTACCAAAGGTGCAATTTATGACTCCAGAAGGAAATCAAAACACATCGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1
CDS CCA 72 bp CAGCATAAACCGTCAAAACTTGATAAAAGACTGTCTTaGGGTTATCTTGCTGTCATGATTCCGATGTGTTTT +
Preference number: 6 (lower is better)
Translates to: QHKPSKLDKRLS*GYLAVMIPMCF
Trigger: AAAACACATCGGAATCATGACAGCAAGATAACCCCAAGACAGTCTTTTATCAAGTTTTGACGGTTTATGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240662.3
ENST00000657855.1
ENST00000665145.1
ENST00000667884.1