RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNJ2 (Homo sapiens)

Ensembl gene IDs: ENSG00000123700

Ensembl transcript IDs: ENST00000243457.4, ENST00000535240.1

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGAGGCCAGGTGTGGCATCTTCCCTAAGGTGAAGGTGGGCTGGTaGTGTCCTGACAGTCCAGGCAATAAATTCAGCAGCAAGGGTTTA +
Preference number: 1 (lower is better)
Translates to: VEARCGIFPKVKVGW*CPDSPGNKFSSKGL
Trigger: TAAACCCTTGCTGCTGAATTTATTGCCTGGACTGTCAGGACATCACCAGCCCACCTTCACCTTAGGGAAGATGCCACACCTGGCCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR TCA 90 bp TCAGAAGAGCAAGTGTGGAGGCCAGGTGTGGCATCTTCCCTAAGGTaGAGGTGGGCTGGTGATGTCCTGACAGTCCAGGCAATAAATTCA +
Preference number: 1 (lower is better)
Translates to: SEEQVWRPGVASSLR*RWAGDVLTVQAINS
Trigger: TGAATTTATTGCCTGGACTGTCAGGACATCACCAGCCCACCTTCACCTTAGGGAAGATGCCACACCTGGCCTCCACACTTGCTCTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR TCA 90 bp GTCCACACCTCCCTGTTTCCCTGCTTTGGCATTTGCCGCCCTATCTaGCACTGTAGGACTCAATCCAGACAGACTGATCAGAAGAGCAAG +
Preference number: 1 (lower is better)
Translates to: VHTSLFPCFGICRPI*HCRTQSRQTDQKSK
Trigger: CTTGCTCTTCTGATCAGTCTGTCTGGATTGAGTCCTACAGTGTCAGATAGGGCGGCAAATGCCAAAGCAGGGAAACAGGGAGGTGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CCA 90 bp AAATCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTaGGAATCAACCCCAGATATTCATGGTGAGTCCCCTCCGTCTGCA +
Preference number: 1 (lower is better)
Translates to: KSNRESACNREATHI*ESTPDIHGESPPSA
Trigger: TGCAGACGGAGGGGACTCACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR GCA 90 bp CTTTCTTTGAAACCATTGTGCTTGCCTCAGTCCCTTGTGGCCGCTTaGTTGACCCATCTTGACCAGTACCGTCATCTGTATAACTGTTTT +
Preference number: 1 (lower is better)
Translates to: LSLKPLCLPQSLVAA*LTHLDQYRHLYNCF
Trigger: AAAACAGTTATACAGATGACGGTACTGGTCAAGATGGGTCAAGCAAGCGGCCACAAGGGACTGAGGCAAGCACAATGGTTTCAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR GCA 90 bp CTTTATGCTAATCATGGAGCTTACAGTCTTTCTTTGAAACCATTGTaGTTGCCTCAGTCCCTTGTGGCCGCTTGCTTGACCCATCTTGAC +
Preference number: 1 (lower is better)
Translates to: LYANHGAYSLSLKPL*LPQSLVAACLTHLD
Trigger: GTCAAGATGGGTCAAGCAAGCGGCCACAAGGGACTGAGGCAAGCACAATGGTTTCAAAGAAAGACTGTAAGCTCCATGATTAGCATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR GCA 90 bp CAGCTGAAGCCCTCAATATCCTCTCACTGTCAAGAACCAAATTGTTaGCTCTTCTGTAAGTTTTCTTTACAACTCAATCCCCAATTCCTC +
Preference number: 1 (lower is better)
Translates to: QLKPSISSHCQEPNC*LFCKFSLQLNPQFL
Trigger: GAGGAATTGGGGATTGAGTTGTAAAGAAAACTTACAGAAGAGGCAACAATTTGGTTCTTGACAGTGAGAGGATATTGAGGGCTTCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CCA 90 bp CAAAAAGACAGCAAATGGGAAAATAATAACTATCACGATTGTCAATaGCTAGGATTGTTCAACTTGCCAGAGCCCAGAGCGGAAACCCAA +
Preference number: 1 (lower is better)
Translates to: QKDSKWENNNYHDCQ*LGLFNLPEPRAETQ
Trigger: TTGGGTTTCCGCTCTGGGCTCTGGCAAGTTGAACAATCCTAGCCATTGACAATCGTGATAGTTATTATTTTCCCATTTGCTGTCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 90 bp GTGCTGCATCAAACTGGCTTGTCCACACCTCCCTGTTTCCCTGCTTaGGCATTTGCCGCCCTATCTGACACTGTAGGACTCAATCCAGAC +
Preference number: 2 (lower is better)
Translates to: VLHQTGLSTPPCFPA*AFAALSDTVGLNPD
Trigger: GTCTGGATTGAGTCCTACAGTGTCAGATAGGGCGGCAAATGCCAAAGCAGGGAAACAGGGAGGTGTGGACAAGCCAGTTTGATGCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGCTCGCACACTACACATaGGCCTGGCCAGCACTGCCT +
Preference number: 2 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLLAHYT*AWPALP
Trigger: AGGCAGTGCTGGCCAGGCTCATGTGTAGTGTGCGAG...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 90 bp TCTTTGAAACCATTGTGCTTGCCTCAGTCCCTTGTGGCCGCTTGCTaGACCCATCTTGACCAGTACCGTCATCTGTATAACTGTTTTGGG +
Preference number: 2 (lower is better)
Translates to: SLKPLCLPQSLVAAC*THLDQYRHLYNCFG
Trigger: CCCAAAACAGTTATACAGATGACGGTACTGGTCAAGATGGGTCAAGCAAGCGGCCACAAGGGACTGAGGCAAGCACAATGGTTTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTACCTCCCTGTTTCCCTaGTTTGGCATTTGCCGCCCT +
Preference number: 2 (lower is better)
Translates to: ACNREATHIWESTPDIHGTSLFP*FGICRP
Trigger: AGGGCGGCAAATGCCAAAGCAGGGAAACAGGGAGGT...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCTGTTTCCCTGCTTTaGCATTTGCCGCCCTATCTG +
Preference number: 2 (lower is better)
Translates to: SNRESACNREATHIWESTPVSLL*HLPPYL
Trigger: CAGATAGGGCGGCAAATGCCAAAGCAGGGAAACAGG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 90 bp TATGCTAATCATGGAGCTTACAGTCTTTCTTTGAAACCATTGTGCTaGCCTCAGTCCCTTGTGGCCGCTTGCTTGACCCATCTTGACCAG +
Preference number: 2 (lower is better)
Translates to: YANHGAYSLSLKPLC*PQSLVAACLTHLDQ
Trigger: CTGGTCAAGATGGGTCAAGCAAGCGGCCACAAGGGACTGAGGCAAGCACAATGGTTTCAAAGAAAGACTGTAAGCTCCATGATTAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTGGATGGCTCAGTTTTaGGAATGCCAGGATGCCAAG +
Preference number: 2 (lower is better)
Translates to: SNRESACNREATHIWESTWMAQF*ECQDAK
Trigger: CTTGGCATCCTGGCATTCTCAAAACTGAGCCATCCA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGGCATCTTCCCTAAGGTaGAGGTGGGCTGGTGATGTC +
Preference number: 2 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLASSLR*RWAGDV
Trigger: GACATCACCAGCCCACCTTCACCTTAGGGAAGATGC...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATTCCCTTGTGGCCGCTTaGTTGACCCATCTTGACCAG +
Preference number: 2 (lower is better)
Translates to: IYVPSGHMETWLVLYANHSLVAA*LTHLDQ
Trigger: CTGGTCAAGATGGGTCAAGCAAGCGGCCACAAGGGA...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTTGCTTGACCCATCTTaGCCAGTACCGTCATCTGTA +
Preference number: 2 (lower is better)
Translates to: SNRESACNREATHIWESTLLDPS*PVPSSV
Trigger: TACAGATGACGGTACTGGTCAAGATGGGTCAAGCAA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCATAATAGCAGCAGCTaGAGCCCTCAATATCCTCTC +
Preference number: 2 (lower is better)
Translates to: SNRESACNREATHIWESTHNSSS*SPQYPL
Trigger: GAGAGGATATTGAGGGCTTCAGCTGCTGCTATTATG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGTCAGAAGAGCAAGTGTaGAGGCCAGGTGTGGCATCT +
Preference number: 2 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLSEEQV*RPGVAS
Trigger: AGATGCCACACCTGGCCTCCACACTTGCTCTTCTGA...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 90 bp ACATGGTTAGTGCTTTATGCTAATCATGGAGCTTACAGTCTTTCTTaGAAACCATTGTGCTTGCCTCAGTCCCTTGTGGCCGCTTGCTTG +
Preference number: 2 (lower is better)
Translates to: TWLVLYANHGAYSLS*KPLCLPQSLVAACL
Trigger: CAAGCAAGCGGCCACAAGGGACTGAGGCAAGCACAATGGTTTCAAAGAAAGACTGTAAGCTCCATGATTAGCATAAAGCACTAACCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTCTACAACATCTATGTaGCATCGGGTCACATGGAGA +
Preference number: 2 (lower is better)
Translates to: SNRESACNREATHIWESTSTTSM*HRVTWR
Trigger: TCTCCATGTGACCCGATGGCACATAGATGTTGTAGA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGTTGTGGCCGCTTGCTTaGCCCATCTTGACCAGTACC +
Preference number: 2 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIELWPLA*PILTST
Trigger: GGTACTGGTCAAGATGGGTCAAGCAAGCGGCCACAA...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCAAAGTTATTGTCTCTTaGTTTCAAGGCAGCCCATGG +
Preference number: 2 (lower is better)
Translates to: SNRESACNREATHIWESTKVIVS*FQGSPW
Trigger: CCATGGGCTGCCTTGAAATCAAGAGACAATAACTTT...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAAGCCATCAAATCTaGAGGCTGAAAACAGCAAAA +
Preference number: 2 (lower is better)
Translates to: SNRESACNREATHIWESTPSHQI*RLKTAK
Trigger: TTTTGCTGTTTTCAGCCTTCAGATTTGATGGCTTGG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGTTGAGAATGCCAGGATaGCAAGGAGGTCCTATGAAG +
Preference number: 2 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLLRMPG*QGGPMK
Trigger: CTTCATAGGACCTCCTTGGCATCCTGGCATTCTCAA...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTCTTGATCTGAAGTGCTaGATCAAACTGGCTTGTCCA +
Preference number: 2 (lower is better)
Translates to: ACNREATHIWESTPDIHGLDLKC*IKLACP
Trigger: TGGACAAGCCAGTTTGATGCAGCACTTCAGATCAAG...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTAGTGCTGCATCAAACTaGCTTGTCCACACCTCCCTG +
Preference number: 2 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFASAASN*LVHTSL
Trigger: CAGGGAGGTGTGGACAAGCCAGTTTGATGCAGCACT...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTCACGGCATTCAGATATaGCTGTTCAAGAACCAGAGA +
Preference number: 2 (lower is better)
Translates to: ACNREATHIWESTPDIHGHGIQI*LFKNQR
Trigger: TCTCTGGTTCTTGAACAGCCATATCTGAATGCCGTG...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGCCTTCCTTAGTAACCTaGTCTAGGGCTCCACAGGAG +
Preference number: 2 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEPSLVT*SRAPQE
Trigger: CTCCTGTGGAGCCCTAGAGCAGGTTACTAAGGAAGG...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGGGCAGGGGAGGCTTCTaGAAAACAATGTGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEGRGGF*KTMCPS
Trigger: GGAAGGACACATTGTTTTCCAGAAGCCTCCCCTGCC...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 90 bp AGCAAATGGGAAAATAATAACTATCACGATTGTCAATGGCTAGGATaGTTCAACTTGCCAGAGCCCAGAGCGGAAACCCAAAATTACCAG +
Preference number: 2 (lower is better)
Translates to: SKWENNNYHDCQWLG*FNLPEPRAETQNYQ
Trigger: CTGGTAATTTTGGGTTTCCGCTCTGGGCTCTGGCAAGTTGAACAATCCTAGCCATTGACAATCGTGATAGTTATTATTTTCCCATTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTCCTAAGCACTTGATCTaGAGTGCTGCATCAAACTGG +
Preference number: 2 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAPKHLI*SAASNW
Trigger: CCAGTTTGATGCAGCACTTCAGATCAAGTGCTTAGG...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGATCTTTCATGCTGGATaGCTCAGTTTTGAGAATGCC +
Preference number: 2 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLIFHAG*LSFENA
Trigger: GGCATTCTCAAAACTGAGCCATCCAGCATGAAAGAT...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTTCCTTCCTAAGCACTTaGTCTGAAGTGCTGCATCAA +
Preference number: 2 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFASFLST*SEVLHQ
Trigger: TTGATGCAGCACTTCAGATCAAGTGCTTAGGAAGGA...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTTCTTTGAAACCATTGTaGTTGCCTCAGTCCCTTGTG +
Preference number: 2 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFASLKPL*LPQSLV
Trigger: CACAAGGGACTGAGGCAAGCACAATGGTTTCAAAGA...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTGCACTTGATCTGAAGTaGTGCATCAAACTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAALDLK*CIKLAC
Trigger: ACAAGCCAGTTTGATGCAGCACTTCAGATCAAGTGC...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCATTTTGAAGGTAAAATaGAGCAATCAATGTCGTGCA +
Preference number: 2 (lower is better)
Translates to: SNRESACNREATHIWESTILKVK*SNQCRA
Trigger: TGCACGACATTGATTGCTGCATTTTACCTTCAAAAT...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGTCAAGTCTTTTTAAGTaGCAGCACTGTGTGTTTAGG +
Preference number: 2 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLSSLFK*QHCVFR
Trigger: CCTAAACACACAGTGCTGCCACTTAAAAAGACTTGA...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR GCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGTACCCAACCAAGGCTTaGCTGCAAGTTCAAGTTTTG +
Preference number: 2 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEYPTKA*LQVQVL
Trigger: CAAAACTTGAACTTGCAGGCAAGCCTTGGTTGGGTA...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGCTTACAGTCTTTCTTTaGAACCATTGTGCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIELTVFL*NHCACL
Trigger: GAGGCAAGCACAATGGTTTCAAAGAAAGACTGTAAG...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGGGTTCAAGGTCTTGCTaGGGTTCAAAGTTATTGTCT +
Preference number: 2 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEGSRSC*GSKLLS
Trigger: AGACAATAACTTTGAACCTCAGCAAGACCTTGAACC...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGGCCAAGGAGGTCCTATaGAGATCTTGTCTTATGAAA +
Preference number: 2 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEAKEVL*RSCLMK
Trigger: TTTCATAAGACAAGATCTTCATAGGACCTCCTTGGC...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR TCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTATTGTAAGGGAAATATaGTTTACGGGACAGAACTCA +
Preference number: 2 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAIVREI*FTGQNS
Trigger: TGAGTTCTGTCCCGTAAATCATATTTCCCTTACAAT...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGATCAGGCTCTTGTTTTaGCAGTTAATAGCCAAATAC +
Preference number: 2 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEIRLLF*QLIAKY
Trigger: GTATTTGGCTATTAACTGCCAAAACAAGAGCCTGAT...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR TCA 72 bp CAAGTGTGGAGGCCAGGTGTGGCATCTTCCCTAAGGTaGAGGTGGGCTGGTGATGTCCTGACAGTCCAGGCA +
Preference number: 3 (lower is better)
Translates to: QVWRPGVASSLR*RWAGDVLTVQA
Trigger: TGCCTGGACTGTCAGGACATCACCAGCCCACCTTCACCTTAGGGAAGATGCCACACCTGGCCTCCACACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR TCA 72 bp TCCCTGTTTCCCTGCTTTGGCATTTGCCGCCCTATCTaGCACTGTAGGACTCAATCCAGACAGACTGATCAG +
Preference number: 3 (lower is better)
Translates to: SLFPCFGICRPI*HCRTQSRQTDQ
Trigger: CTGATCAGTCTGTCTGGATTGAGTCCTACAGTGTCAGATAGGGCGGCAAATGCCAAAGCAGGGAAACAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CAA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTTGAAACCATTGTGCTaGCCTCAGTCCCTTGTGGCC +
Preference number: 3 (lower is better)
Translates to: SNRESACNREATHIWESTLKPLC*PQSLVA
Trigger: GGCCACAAGGGACTGAGGCAAGCACAATGGTTTCAA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CAA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTTCCCTGCTTTGGCATTaGCCGCCCTATCTGACACTG +
Preference number: 3 (lower is better)
Translates to: ACNREATHIWESTPDIHGSLLWH*PPYLTL
Trigger: CAGTGTCAGATAGGGCGGCAAATGCCAAAGCAGGGA...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CAA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCTGCATCAAACTGGCTaGTCCACACCTCCCTGTTTC +
Preference number: 3 (lower is better)
Translates to: SNRESACNREATHIWESTLHQTG*STPPCF
Trigger: GAAACAGGGAGGTGTGGACAAGCCAGTTTGATGCAG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CAA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATCTTGTGGCCGCTTGCTaGACCCATCTTGACCAGTAC +
Preference number: 3 (lower is better)
Translates to: IYVPSGHMETWLVLYANHLVAAC*THLDQY
Trigger: GTACTGGTCAAGATGGGTCAAGCAAGCGGCCACAAG...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR GCA 72 bp GGCTTCTGGAAAACAATGTGTCCTTCCTTAGTAACCTaGTCTAGGGCTCCACAGGAGAAAATGCTTAGCTCA +
Preference number: 3 (lower is better)
Translates to: GFWKTMCPSLVT*SRAPQEKMLSS
Trigger: TGAGCTAAGCATTTTCTCCTGTGGAGCCCTAGAGCAGGTTACTAAGGAAGGACACATTGTTTTCCAGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR TCA 72 bp TGCTTTATGCTAATCATGGAGCTTACAGTCTTTCTTTaGAACCATTGTGCTTGCCTCAGTCCCTTGTGGCCG +
Preference number: 3 (lower is better)
Translates to: CFMLIMELTVFL*NHCACLSPLWP
Trigger: CGGCCACAAGGGACTGAGGCAAGCACAATGGTTTCAAAGAAAGACTGTAAGCTCCATGATTAGCATAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR TCA 72 bp AACACACATCTGGGAATCAACCCCAGATATTCATGGTaGGTCCCCTCCGTCTGCATTCTAATGACATGTGTA +
Preference number: 3 (lower is better)
Translates to: NTHLGINPRYSW*VPSVCILMTCV
Trigger: TACACATGTCATTAGAATGCAGACGGAGGGGACTCACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CAA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGATACCCAACCAAGGCTaGCCTGCAAGTTCAAGTTTT +
Preference number: 3 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLIPNQG*PASSSF
Trigger: AAAACTTGAACTTGCAGGCAAGCCTTGGTTGGGTAT...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CAA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTCTTTCTTTGAAACCATaGTGCTTGCCTCAGTCCCTT +
Preference number: 3 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFALSLKP*CLPQSL
Trigger: AAGGGACTGAGGCAAGCACAATGGTTTCAAAGAAAG...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CAA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTCAAAGTTATTGTCTCTaGATTTCAAGGCAGCCCATG +
Preference number: 3 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAQSYCL*ISRQPM
Trigger: CATGGGCTGCCTTGAAATCAAGAGACAATAACTTTG...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CAA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGCAAATACTTGCCACTTaGAAGCGCATCATGAGCTTT +
Preference number: 3 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEQILAT*KRIMSF
Trigger: AAAGCTCATGATGCGCTTCAAAGTGGCAAGTATTTG...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR-3UTR CAA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTAAAATTGTCATAGTTTaGCAGGCACGGCATTCAGAT +
Preference number: 3 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAKIVIV*QARHSD
Trigger: ATCTGAATGCCGTGCCTGCAAAACTATGACAATTTT...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTGGGAAGGCTGCGCGCTaGCCAGGGCTCCAGTGCGCT +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGGKAAR*PGLQCA
Trigger: AGCGCACTGGAGCCCTGGCCAGCGCGCAGCCTTCCC...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 72 bp CAAACTGGCTTGTCCACACCTCCCTGTTTCCCTGCTTaGGCATTTGCCGCCCTATCTGACACTGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: QTGLSTPPCFPA*AFAALSDTVGL
Trigger: GAGTCCTACAGTGTCAGATAGGGCGGCAAATGCCAAAGCAGGGAAACAGGGAGGTGTGGACAAGCCAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTGCTGGCGCAGGAGCATaGGGACATGGAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGAGAGA*GHGVEV
Trigger: CACTTCCACTCCATGTCCCCATGCTCCTGCGCCAGC...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCGATGCTGTAGCGGTTaGTTCGCACACTGCCCATCG +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTRCCSG*FAHCPS
Trigger: CGATGGGCAGTGTGCGAACCAACCGCTACAGCATCG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCACACTTGCCTGGTTGTaGAGGTCTATGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTTLAWL*RSMSGG
Trigger: GCCCCCTGACATAGACCTTCACAACCAGGCAAGTGT...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATCTCGCACACTACACATaGGCCTGGCCAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHLAHYT*AWPALP
Trigger: AGGCAGTGCTGGCCAGGCTCATGTGTAGTGTGCGAG...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTACTGCCCATCGCTTCTaGTGGGGACTCCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGTAHRF*WGLQCF
Trigger: GAAGCACTGGAGTCCCCAGCAGAAGCGATGGGCAGT...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTCCCTTGTGGCCGCTTaGTTGACCCATCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTSLVAA*LTHLDQ
Trigger: CTGGTCAAGATGGGTCAAGCAAGCGGCCACAAGGGA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTCTCGCCGTAAGGGCCTaGGCTCTAGAGGTACACTTG +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGLAVRA*ALEVHL
Trigger: CAAGTGTACCTCTAGAGCCCAGGCCCTTACGGCGAG...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 72 bp CATGGAGCTTACAGTCTTTCTTTGAAACCATTGTGCTaGCCTCAGTCCCTTGTGGCCGCTTGCTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: HGAYSLSLKPLC*PQSLVAACLTH
Trigger: ATGGGTCAAGCAAGCGGCCACAAGGGACTGAGGCAAGCACAATGGTTTCAAAGAAAGACTGTAAGCTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATGAGAACATGTCCTGTTaGTGGCGCAGGAGCATGGGG +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHENMSC*WRRSMG
Trigger: CCCCATGCTCCTGCGCCAGCAACAGGACATGTTCTC...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTTTGCCCTCTTTGGATaGATCCAGGTCCCCATGGAG +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTFALFG*IQVPME
Trigger: CTCCATGGGGACCTGGATGCATCCAAAGAGGGCAAA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCAGAGATGGGTGTCTCTaGGAGCCTTGTGGTTCTACC +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTRDGCL*EPCGST
Trigger: GGTAGAACCACAAGGCTCCCAGAGACACCCATCTCT...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCGCTTGCCGTCTCTCATaGCAATCACGGCATTGTGAC +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTACRLS*QSRHCD
Trigger: GTCACAATGCCGTGATTGCCATGAGAGACGGCAAGC...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATTTGTGGCCGCTTGCTTaGCCCATCTTGACCAGTACC +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHLWPLA*PILTST
Trigger: GGTACTGGTCAAGATGGGTCAAGCAAGCGGCCACAA...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATTCTGCGAGGTACCGTTaGCCCTTCTCACCCACATTG +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHSARYR*PFSPTL
Trigger: CAATGTGGGTGAGAAGGGGCAACGGTACCTCGCAGA...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGCGTGGTGAAGATGTCTaGGAGGTACCGTTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLRGEDV*EVPLPL
Trigger: AAGGGGCAACGGTACCTCGCAGACATCTTCACCACG...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTCCTTCCTTAGTAACCTaGTCTAGGGCTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGPSLVT*SRAPQE
Trigger: CTCCTGTGGAGCCCTAGAGCAGGTTACTAAGGAAGG...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGAACATGTCCTGTTGCTaGCGCAGGAGCATGGGGACA +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLNMSCC*RRSMGT
Trigger: TGTCCCCATGCTCCTGCGCCAGCAACAGGACATGTT...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTCTCTGGGAGCCTTGTaGTTCTACCAAGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTSLGAL*FYQGLS
Trigger: AGACAGACCTTGGTAGAACCACAAGGCTCCCAGAGA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTGCAATCACGGCATTGTaGCTGAAGACAAGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGAITAL*LKTRVS
Trigger: CGAGACTCTTGTCTTCAGTCACAATGCCGTGATTGC...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATAGCTGTGCTCGAACATaGGCTTCCACCAAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHSCART*ASTKWL
Trigger: AAGCCACTTGGTGGAAGCTCATGTTCGAGCACAGCT...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTTGGATGGCTCAGTTTTaGGAATGCCAGGATGCCAAG +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGWMAQF*ECQDAK
Trigger: CTTGGCATCCTGGCATTCTCAAAACTGAGCCATCCA...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTATTTGCCGCCCTATCTaGCACTGTAGGACTCAATCC +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGICRPI*HCRTQS
Trigger: GGATTGAGTCCTACAGTGTCAGATAGGGCGGCAAAT...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATCCCAGATATTCATGGTaGGTCCCCTCCGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHPRYSW*VPSVCI
Trigger: AATGCAGACGGAGGGGACTCACCATGAATATCTGGG...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGGGTTGGTTCGCACACTaGCCATCGCTTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEGWFAH*PSLLLG
Trigger: CCCCAGCAGAAGCGATGGGCAGTGTGCGAACCAACC...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTGGCTTTTCCGAAGATTaGCCACTCGCCACATCAAAC +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGGFSED*PLATSN
Trigger: GTTTGATGTGGCGAGTGGGCAATCTTCGGAAAAGCC...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGGCCCATCGCTTCTGCTaGGGACTCCAGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEAHRFC*GLQCFC
Trigger: GCAGAAGCACTGGAGTCCCCAGCAGAAGCGATGGGC...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATGCATCCAGGTCCCCATaGAGCAGAGCTATCAACCAA +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHASRSP*SRAINQ
Trigger: TTGGTTGATAGCTCTGCTCCATGGGGACCTGGATGC...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATCCTGTTTCCCTGCTTTaGCATTTGCCGCCCTATCTG +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHPVSLL*HLPPYL
Trigger: CAGATAGGGCGGCAAATGCCAAAGCAGGGAAACAGG...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGAGTGCTGCATCAAACTaGCTTGTCCACACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLSAASN*LVHTSL
Trigger: CAGGGAGGTGTGGACAAGCCAGTTTGATGCAGCACT...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTGCTGAGGGTTGGGGATaGGCAGGTAGCTATGCCACA +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAAEGWG*AGSYAT
Trigger: TGTGGCATAGCTACCTGCCCATCCCCAACCCTCAGC...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGCATACCGTCTTCTTCTaGAGAGACGATGCTGTAGCG +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLHTVFF*RDDAVA
Trigger: CGCTACAGCATCGTCTCTTCAGAAGAAGACGGTATG...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTTGTCCACACACGTGGTaGAGATGTCTGCGAGGTACC +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFACPHTW*RCLRGT
Trigger: GGTACCTCGCAGACATCTTCACCACGTGTGTGGACA...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTCCTAAGCACTTGATCTaGAGTGCTGCATCAAACTGG +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGPKHLI*SAASNW
Trigger: CCAGTTTGATGCAGCACTTCAGATCAAGTGCTTAGG...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTGAGATTCTACTTTGCTaGGGGTTGGGGATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAEILLC*GLGMGR
Trigger: CCTGCCCATCCCCAACCCTCAGCAAAGTAGAATCTC...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATCTTCTGAAGAGACGATaGTGTAGCGGTTGGTTCGCA +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHLLKRR*CSGWFA
Trigger: TGCGAACCAACCGCTACAGCATCGTCTCTTCAGAAG...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTTCACAAAGCGGCTCCTaGACTGTTGTCGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFASQSGS*TVVGCG
Trigger: TCCACACCCGACAACAGTGCAGGAGCCGCTTTGTGA...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTCATCTTGGCCATGACTaGGCCAATGATGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGHLGHD*ANDESI
Trigger: GATGCTTTCATCATTGGCGCAGTCATGGCCAAGATG...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTACCTCCCTGTTTCCCTaGTTTGGCATTTGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFATSLFP*FGICRP
Trigger: AGGGCGGCAAATGCCAAAGCAGGGAAACAGGGAGGT...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCAGCAATCAATGTCGTaGATTACCTGTGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTQQSMS*ITCVLA
Trigger: AGCCAAGACACAGGTAATGCACGACATTGATTGCTG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGAAGCTTTGCCCTCTTTaGATGCATCCAGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLKLCPL*MHPGPH
Trigger: ATGGGGACCTGGATGCATCCAAAGAGGGCAAAGCTT...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTTTCTGCTAAGTCTCTaGCACTACAAAGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTFLLSL*HYKGEC
Trigger: ACACTCCCCTTTGTAGTGCCAGAGACTTAGCAGAAA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGTACTTTGCTGAGGGTTaGGGATGGGCAGGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLYFAEG*GWAGSY
Trigger: ATAGCTACCTGCCCATCCCCAACCCTCAGCAAAGTA...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 72 bp AACTATCACGATTGTCAATGGCTAGGATTGTTCAACTaGCCAGAGCCCAGAGCGGAAACCCAAAATTACCAG +
Preference number: 4 (lower is better)
Translates to: NYHDCQWLGLFN*PEPRAETQNYQ
Trigger: CTGGTAATTTTGGGTTTCCGCTCTGGGCTCTGGCAAGTTGAACAATCCTAGCCATTGACAATCGTGATAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGGCATCTTCCCTAAGGTaGAGGTGGGCTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEASSLR*RWAGDV
Trigger: GACATCACCAGCCCACCTTCACCTTAGGGAAGATGC...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTACATCAAACACAGCTTaGCGTCTCTCATGGCAATCA +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGTSNTA*RLSWQS
Trigger: TGATTGCCATGAGAGACGGCAAGCTGTGTTTGATGT...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTTACCCAACCAAGGCTTaGCTGCAAGTTCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGYPTKA*LQVQVL
Trigger: CAAAACTTGAACTTGCAGGCAAGCCTTGGTTGGGTA...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATCATTTGCAACTGCCATaGTGGCCAACTTCATACCGT +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHHLQLP*WPTSYR
Trigger: ACGGTATGAAGTTGGCCACCATGGCAGTTGCAAATG...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCATGAAAACAGCAATTaGGCATTCATCCGTGACACA +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTHENSN*AFIRDT
Trigger: TGTGTCACGGATGAATGCCCAATTGCTGTTTTCATG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTGGCAGGGGAGGCTTCTaGAAAACAATGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAGRGGF*KTMCPS
Trigger: GGAAGGACACATTGTTTTCCAGAAGCCTCCCCTGCC...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTTGGAGAAACAGTTTTaGATGTTCGGTGAAGACACA +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTLEKQF*MFGEDT
Trigger: TGTGTCTTCACCGAACATTCAAAACTGTTTCTCCAA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATCCCACATTGATGAACTaGACATTACAGTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHPTLMN*TLQWPS
Trigger: AGATGGCCACTGTAATGTTCAGTTCATCAATGTGGG...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTTTAAAAGCACTACACTaGCTAGACTCGGTGAGTATG +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGLKALH*LDSVSM
Trigger: CATACTCACCGAGTCTAGTCAGTGTAGTGCTTTTAA...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTCGGACACACAAGCTTTaGCCTCTTTGGATGCATCCA +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFARTHKL*PLWMHP
Trigger: TGGATGCATCCAAAGAGGGCAAAGCTTGTGTGTCCG...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGTCTACAACATCTATGTaGCATCGGGTCACATGGAGA +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLSTTSM*HRVTWR
Trigger: TCTCCATGTGACCCGATGGCACATAGATGTTGTAGA...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATGCACTTGATCTGAAGTaGTGCATCAAACTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHALDLK*CIKLAC
Trigger: ACAAGCCAGTTTGATGCAGCACTTCAGATCAAGTGC...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCTCAAGTCTTTTTAAGTaGCAGCACTGTGTGTTTAGG +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTSSLFK*QHCVFR
Trigger: CCTAAACACACAGTGCTGCCACTTAAAAAGACTTGA...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTGAAGCAACACACATCTaGGAATCAACCCCAGATATT +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGEATHI*ESTPDI
Trigger: AATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTC...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 72 bp GTTCAAGGTCTTGCTGAGGTTCAAAGTTATTGTCTCTaGATTTCAAGGCAGCCCATGGGGCTTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VQGLAEVQSYCL*ISRQPMGLCFL
Trigger: AAGAAAACAAAGCCCCATGGGCTGCCTTGAAATCAAGAGACAATAACTTTGAACCTCAGCAAGACCTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
3UTR CAA 72 bp GAAAATAATAACTATCACGATTGTCAATGGCTAGGATaGTTCAACTTGCCAGAGCCCAGAGCGGAAACCCAA +
Preference number: 4 (lower is better)
Translates to: ENNNYHDCQWLG*FNLPEPRAETQ
Trigger: TTGGGTTTCCGCTCTGGGCTCTGGCAAGTTGAACAATCCTAGCCATTGACAATCGTGATAGTTATTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTTTTGTAAAAAGCGAGTaGGCCAAAGCAAACCAGAAT +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGFVKSE*AKANQN
Trigger: ATTCTGGTTTGCTTTGGCTCACTCGCTTTTTACAAA...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTTCACGGCATTGTGACTaGAGACAAGAGTCTCGTTTC +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFASRHCD*RQESRF
Trigger: GAAACGAGACTCTTGTCTTCAGTCACAATGCCGTGA...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTTGTCAAACCCAACATTaGTGTCTATTTGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGCQTQH*CLFDPE
Trigger: CTCTGGATCAAATAGACATCAATGTTGGGTTTGACA...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGCTTCCTCTTTGCTTGTaGGGGCAACTTCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLLPLCL*GQLHFH
Trigger: ATGAAAATGAAGTTGCCCTCACAAGCAAAGAGGAAG...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGAAAGTTATTGTCTCTTaGTTTCAAGGCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLKVIVS*FQGSPW
Trigger: CCATGGGCTGCCTTGAAATCAAGAGACAATAACTTT...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGGGTTCAAGGTCTTGCTaGGGTTCAAAGTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLGSRSC*GSKLLS
Trigger: AGACAATAACTTTGAACCTCAGCAAGACCTTGAACC...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCAACAGTCTGAGTTTTTaGAAAACGCTTTGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTNSLSF*KTLWRN
Trigger: GTTTCTCCAAAGCGTTTTGCAAAAACTCAGACTGTT...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTGGACTCCAGTGCTTCTaGTTTGGAAAACAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAGLQCF*FGKQSE
Trigger: CTCAGACTGTTTTCCAAAGCAGAAGCACTGGAGTCC...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGGGATTTGAGGAGCTGTaGTCGAACATGAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEGFEEL*SNMSFH
Trigger: GTGGAAGCTCATGTTCGAGCACAGCTCCTCAAATCC...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGCTCCACAGGAGAAAATaGTTAGCTCACATTCAGTCA +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLLHRRK*LAHIQS
Trigger: TGACTGAATGTGAGCTAAGCATTTTCTCCTGTGGAG...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATAACAGGGAATCTGCTTaGAATAGAGAAGCAACACAC +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHNRESA*NREATH
Trigger: GTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTT...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGCACTGTTGTCGGGTGTaGACTTTACTCTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEHCCRV*TLLFPF
Trigger: GAACGGGAAGAGTAAAGTCCACACCCGACAACAGTG...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATGTTTTGAATGTTCGGTaGAGACACACACACCAAAAA +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHVLNVR*RHTHQK
Trigger: TTTTTGGTGTGTGTGTCTTCACCGAACATTCAAAAC...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTACTGGAACACCACCATaGAAACAGCAATTGGGCATT +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFATGTPP*KQQLGI
Trigger: AATGCCCAATTGCTGTTTTCATGGTGGTGTTCCAGT...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGACATTGATGTCTATTTaGTCCAGAGGGATATACTCC +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLTLMSI*SRGIYS
Trigger: GGAGTATATCCCTCTGGATCAAATAGACATCAATGT...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGTTGCTTGACCCATCTTaGCCAGTACCGTCATCTGTA +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIELLDPS*PVPSSV
Trigger: TACAGATGACGGTACTGGTCAAGATGGGTCAAGCAA...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGCATAATAGCAGCAGCTaGAGCCCTCAATATCCTCTC +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEHNSSS*SPQYPL
Trigger: GAGAGGATATTGAGGGCTTCAGCTGCTGCTATTATG...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTAAAGCCATTTGCAACTaGCATGGTGGCCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAKAICN*HGGQLH
Trigger: ATGAAGTTGGCCACCATGGCAGTTGCAAATGGCTTT...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGCACGATTTCAAAGTCTaGGTTGTCAATGTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLHDFKV*VVNVLF
Trigger: AAACAGGACATTGACAACGCAGACTTTGAAATCGTG...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGTTGAGAATGCCAGGATaGCAAGGAGGTCCTATGAAG +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIELRMPG*QGGPMK
Trigger: CTTCATAGGACCTCCTTGGCATCCTGGCATTCTCAA...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTCTTGATCTGAAGTGCTaGATCAAACTGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFALDLKC*IKLACP
Trigger: TGGACAAGCCAGTTTGATGCAGCACTTCAGATCAAG...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGAAAAATGAGGAGAGATaGGTGTCTCTGGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEKNEER*VSLGAL
Trigger: CAAGGCTCCCAGAGACACCCATCTCTCCTCATTTTT...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGTTGCAACTGCCATGGTaGCCAACTTCATACCGTCTT +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIELQLPW*PTSYRL
Trigger: AAGACGGTATGAAGTTGGCCACCATGGCAGTTGCAA...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTCACGGCATTCAGATATaGCTGTTCAAGAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAHGIQI*LFKNQR
Trigger: TCTCTGGTTCTTGAACAGCCATATCTGAATGCCGTG...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCAATATGTACAATCCATaGTTTGTGCAGTACAATAGG +
Preference number: 4 (lower is better)
Translates to: SNRESACNREATHIWESTNMYNP*FVQYNR
Trigger: CCTATTGTACTGCACAAACCATGGATTGTACATATT...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTGCCAAGGAGGTCCTATaGAGATCTTGTCTTATGAAA +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAAKEVL*RSCLMK
Trigger: TTTCATAAGACAAGATCTTCATAGGACCTCCTTGGC...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGTCCTTCCTAAGCACTTaGTCTGAAGTGCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIESFLST*SEVLHQ
Trigger: TTGATGCAGCACTTCAGATCAAGTGCTTAGGAAGGA...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATTCAAATAAACAGAGTTaGGATAGGAGTGTACTGGTA +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHSNKQS*DRSVLV
Trigger: TACCAGTACACTCCTATCTCAACTCTGTTTATTTGA...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGTCTTTGAAACCATTGTaGTTGCCTCAGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIESLKPL*LPQSLV
Trigger: CACAAGGGACTGAGGCAAGCACAATGGTTTCAAAGA...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTATTTTGAAGGTAAAATaGAGCAATCAATGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: ACNREATHIWESTPDIHGILKVK*SNQCRA
Trigger: TGCACGACATTGATTGCTGCATTTTACCTTCAAAAT...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGAAGTTTTGTGGAACCTaGAATAGTCCACTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLKFCGT*NSPLCS
Trigger: ACTACAAAGTGGACTATTCCAGGTTCCACAAAACTT...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATTATCACGATTGTCAATaGCTAGGATTGTTCAACTTG +
Preference number: 4 (lower is better)
Translates to: IYVPSGHMETWLVLYANHYHDCQ*LGLFNL
Trigger: CAAGTTGAACAATCCTAGCCATTGACAATCGTGATA...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGATCTTTCATGCTGGATaGCTCAGTTTTGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEIFHAG*LSFENA
Trigger: GGCATTCTCAAAACTGAGCCATCCAGCATGAAAGAT...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGATGGACTATAGTGATTaGGGACACCAGAAATATACG +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEMDYSD*GHQKYT
Trigger: CGTATATTTCTGGTGTCCCCAATCACTATAGTCCAT...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CCA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTATCAGGCTCTTGTTTTaGCAGTTAATAGCCAAATAC +
Preference number: 4 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAIRLLF*QLIAKY
Trigger: GTATTTGGCTATTAACTGCCAAAACAAGAGCCTGAT...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR TCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGATTGTAAGGGAAATATaGTTTACGGGACAGAACTCA +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEIVREI*FTGQNS
Trigger: TGAGTTCTGTCCCGTAAATCATATTTCCCTTACAAT...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR GCA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGGTCTGTCTACTGACATaGAGAGTTACTTTAATGACT +
Preference number: 4 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEVCLLT*RVTLMT
Trigger: AGTCATTAAAGTAACTCTGCATGTCAGTAGACAGAC...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS TCA 90 bp TCTCGCCGTAAGGGCCTGGGCTCTAGAGGTACACTTGCCTGGTTGTaGAGGTCTATGTCAGGGGGCGTGTCCGTACTAGTGCTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SRRKGLGSRGTLAWL*RSMSGGVSVLVLSG
Trigger: TCCAGAAAGCACTAGTACGGACACGCCCCCTGACATAGACCTTCACAACCAGGCAAGTGTACCTCTAGAGCCCAGGCCCTTACGGCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS GCA 90 bp CTGCCATGGTGGCCAACTTCATACCGTCTTCTTCTGAAGAGACGATaGTGTAGCGGTTGGTTCGCACACTGCCCATCGCTTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LPWWPTSYRLLLKRR*CSGWFAHCPSLLLG
Trigger: CCCCAGCAGAAGCGATGGGCAGTGTGCGAACCAACCGCTACAGCATCGTCTCTTCAGAAGAAGACGGTATGAAGTTGGCCACCATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 90 bp CCAACTTCATACCGTCTTCTTCTGAAGAGACGATGCTGTAGCGGTTaGTTCGCACACTGCCCATCGCTTCTGCTGGGGACTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: PTSYRLLLKRRCCSG*FAHCPSLLLGTPVL
Trigger: AAGCACTGGAGTCCCCAGCAGAAGCGATGGGCAGTGTGCGAACCAACCGCTACAGCATCGTCTCTTCAGAAGAAGACGGTATGAAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS GCA 90 bp AGAGACGATGCTGTAGCGGTTGGTTCGCACACTGCCCATCGCTTCTaGTGGGGACTCCAGTGCTTCTGCTTTGGAAAACAGTCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: RDDAVAVGSHTAHRF*WGLQCFCFGKQSEF
Trigger: AAACTCAGACTGTTTTCCAAAGCAGAAGCACTGGAGTCCCCAGCAGAAGCGATGGGCAGTGTGCGAACCAACCGCTACAGCATCGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 90 bp GACGATGCTGTAGCGGTTGGTTCGCACACTGCCCATCGCTTCTGCTaGGGACTCCAGTGCTTCTGCTTTGGAAAACAGTCTGAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: DDAVAVGSHTAHRFC*GLQCFCFGKQSEFL
Trigger: CAAAAACTCAGACTGTTTTCCAAAGCAGAAGCACTGGAGTCCCCAGCAGAAGCGATGGGCAGTGTGCGAACCAACCGCTACAGCATCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 90 bp TGGCCATCTTTCTTCACAAAGCGGCTCCTGCACTGTTGTCGGGTGTaGACTTTACTCTTCCCGTTCCCAAAGCCATTTGCAACTGCCATG +
Preference number: 5 (lower is better)
Translates to: WPSFFTKRLLHCCRV*TLLFPFPKPFATAM
Trigger: CATGGCAGTTGCAAATGGCTTTGGGAACGGGAAGAGTAAAGTCCACACCCGACAACAGTGCAGGAGCCGCTTTGTGAAGAAAGATGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 90 bp AGAAGGAATCAGTCAGTCATATCTCCGACTCTCGCCGTAAGGGCCTaGGCTCTAGAGGTACACTTGCCTGGTTGTGAAGGTCTATGTCAG +
Preference number: 5 (lower is better)
Translates to: RRNQSVISPTLAVRA*ALEVHLPGCEGLCQ
Trigger: CTGACATAGACCTTCACAACCAGGCAAGTGTACCTCTAGAGCCCAGGCCCTTACGGCGAGAGTCGGAGATATGACTGACTGATTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS TCA 90 bp ATGTCTGCGAGGTACCGTTGCCCCTTCTCACCCACATTGATGAACTaGACATTACAGTGGCCATCTTTCTTCACAAAGCGGCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: MSARYRCPFSPTLMN*TLQWPSFFTKRLLH
Trigger: GTGCAGGAGCCGCTTTGTGAAGAAAGATGGCCACTGTAATGTTCAGTTCATCAATGTGGGTGAGAAGGGGCAACGGTACCTCGCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS TCA 90 bp TCCCCTTCAGAAGTAATTCTGGATTTGAGGAGCTGTGCTCGAACATaGGCTTCCACCAAGTGGCTTTTCCGAAGATTGCCCACTCGCCAC +
Preference number: 5 (lower is better)
Translates to: SPSEVILDLRSCART*ASTKWLFRRLPTRH
Trigger: GTGGCGAGTGGGCAATCTTCGGAAAAGCCACTTGGTGGAAGCTCATGTTCGAGCACAGCTCCTCAAATCCAGAATTACTTCTGAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 90 bp GGACTTTACTCTTCCCGTTCCCAAAGCCATTTGCAACTGCCATGGTaGCCAACTTCATACCGTCTTCTTCTGAAGAGACGATGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GLYSSRSQSHLQLPW*PTSYRLLLKRRCCS
Trigger: GCTACAGCATCGTCTCTTCAGAAGAAGACGGTATGAAGTTGGCCACCATGGCAGTTGCAAATGGCTTTGGGAACGGGAAGAGTAAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS-3UTR CAA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCGTTCCCAAAGCCATTaGCAACTGCCATGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SNRESACNREATHIWESTRSQSH*QLPWWP
Trigger: TGGCCACCATGGCAGTTGCAAATGGCTTTGGGAACG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCAAGCTTTGCCCTCTTaGGATGCATCCAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: SNRESACNREATHIWESTQALPS*DASRSP
Trigger: TGGGGACCTGGATGCATCCAAAGAGGGCAAAGCTTG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS CCA 90 bp TGTGGACTTTACTCTTCCCGTTCCCAAAGCCATTTGCAACTGCCATaGTGGCCAACTTCATACCGTCTTCTTCTGAAGAGACGATGCTGT +
Preference number: 5 (lower is better)
Translates to: CGLYSSRSQSHLQLP*WPTSYRLLLKRRCC
Trigger: ACAGCATCGTCTCTTCAGAAGAAGACGGTATGAAGTTGGCCACCATGGCAGTTGCAAATGGCTTTGGGAACGGGAAGAGTAAAGTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS-3UTR CAA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATAGAGAACATGTCCTGTaGCTGGCGCAGGAGCATGGG +
Preference number: 5 (lower is better)
Translates to: IYVPSGHMETWLVLYANHREHVL*LAQEHG
Trigger: CCCATGCTCCTGCGCCAGCAACAGGACATGTTCTCT...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATGCGGCTCCTGCACTGTaGTCGGGTGTGGACTTTACT +
Preference number: 5 (lower is better)
Translates to: IYVPSGHMETWLVLYANHAAPAL*SGVDFT
Trigger: AGTAAAGTCCACACCCGACAACAGTGCAGGAGCCGC...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGGTCTGCGAGGTACCGTaGCCCCTTCTCACCCACATT +
Preference number: 5 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLVCEVP*PLLTHI
Trigger: AATGTGGGTGAGAAGGGGCAACGGTACCTCGCAGAC...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATGCAGCCGTGAAGCTGTaGACCTCGGACACACAAGCT +
Preference number: 5 (lower is better)
Translates to: IYVPSGHMETWLVLYANHAAVKL*TSDTQA
Trigger: AGCTTGTGTGTCCGAGGTCAACAGCTTCACGGCTGC...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS GCA 90 bp AGGGATATACTCCCCTTCAGAAGTAATTCTGGATTTGAGGAGCTGTaGTCGAACATGAGCTTCCACCAAGTGGCTTTTCCGAAGATTGCC +
Preference number: 5 (lower is better)
Translates to: RDILPFRSNSGFEEL*SNMSFHQVAFPKIA
Trigger: GGCAATCTTCGGAAAAGCCACTTGGTGGAAGCTCATGTTCGAGCACAGCTCCTCAAATCCAGAATTACTTCTGAAGGGGAGTATATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS-3UTR CAA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGCTTGTGGCCGCTTGCTaGACCCATCTTGACCAGTAC +
Preference number: 5 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLLVAAC*THLDQY
Trigger: GTACTGGTCAAGATGGGTCAAGCAAGCGGCCACAAG...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATTCCCTGCTTTGGCATTaGCCGCCCTATCTGACACTG +
Preference number: 5 (lower is better)
Translates to: IYVPSGHMETWLVLYANHSLLWH*PPYLTL
Trigger: CAGTGTCAGATAGGGCGGCAAATGCCAAAGCAGGGA...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTCTAGGATTGTTCAACTaGCCAGAGCCCAGAGCGGAA +
Preference number: 5 (lower is better)
Translates to: ACNREATHIWESTPDIHGLGLFN*PEPRAE
Trigger: TTCCGCTCTGGGCTCTGGCAAGTTGAACAATCCTAG...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS GCA 90 bp TGTCTCTGGGAGCCTTGTGGTTCTACCAAGGTCTGTCTACTGACATaGAGAGTTACTTTAATGACTCAGCTGACATCCAGAGAACATGTC +
Preference number: 5 (lower is better)
Translates to: CLWEPCGSTKVCLLT*RVTLMTQLTSREHV
Trigger: GACATGTTCTCTGGATGTCAGCTGAGTCATTAAAGTAACTCTGCATGTCAGTAGACAGACCTTGGTAGAACCACAAGGCTCCCAGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS-3UTR CAA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGTCGGACACACAAGCTTaGCCCTCTTTGGATGCATCC +
Preference number: 5 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLSDTQA*PSLDAS
Trigger: GGATGCATCCAAAGAGGGCAAAGCTTGTGTGTCCGA...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGTTTGGCTTTGCCATCTaGGCCATGACTGCGCCAATG +
Preference number: 5 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLFGFAI*AMTAPM
Trigger: CATTGGCGCAGTCATGGCCAAGATGGCAAAGCCAAA...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATTGGCTTTTCCGAAGATaGCCCACTCGCCACATCAAA +
Preference number: 5 (lower is better)
Translates to: IYVPSGHMETWLVLYANHWLFRR*PTRHIK
Trigger: TTTGATGTGGCGAGTGGGCAATCTTCGGAAAAGCCA...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATGCTCTAGAGGTACACTaGCCTGGTTGTGAAGGTCTA +
Preference number: 5 (lower is better)
Translates to: IYVPSGHMETWLVLYANHALEVH*PGCEGL
Trigger: TAGACCTTCACAACCAGGCAAGTGTACCTCTAGAGC...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCATACCCAACCAAGGCTaGCCTGCAAGTTCAAGTTTT +
Preference number: 5 (lower is better)
Translates to: SNRESACNREATHIWESTIPNQG*PASSSF
Trigger: AAAACTTGAACTTGCAGGCAAGCCTTGGTTGGGTAT...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTCGGCGGTTCAAGGTCTaGCTGAGGTTCAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: ACNREATHIWESTPDIHGRRFKV*LRFKVI
Trigger: AATAACTTTGAACCTCAGCAAGACCTTGAACCGCCG...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTCCCTGTTTCCCTGCTTaGGCATTTGCCGCCCTATCT +
Preference number: 5 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAPCFPA*AFAALS
Trigger: AGATAGGGCGGCAAATGCCAAAGCAGGGAAACAGGG...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGTGTCAATGGCTAGGATaGTTCAACTTGCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLCQWLG*FNLPEP
Trigger: GGGCTCTGGCAAGTTGAACAATCCTAGCCATTGACA...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp TTGAAGGTAAAATGCAGCAATCAATGTCGTGCATTACCTGTGTCTTGGCTCTTGCCCACAGGATTTCATTaGCTAGATAAGAGCTACGGC +
Preference number: 5 (lower is better)
Translates to: LKVKCSNQCRALPVSWLLPTGFH*LDKSYG
Trigger: GCCGTAGCTCTTATCTAGCAAATGAAATCCTGTGGG...CAAGAGCCAAGACACAGGTAATGCACGACATTGATTGCTGCATTTTACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCAAATACTTGCCACTTaGAAGCGCATCATGAGCTTT +
Preference number: 5 (lower is better)
Translates to: SNRESACNREATHIWESTQILAT*KRIMSF
Trigger: AAAGCTCATGATGCGCTTCAAAGTGGCAAGTATTTG...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTCTGCATCAAACTGGCTaGTCCACACCTCCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFALHQTG*STPPCF
Trigger: GAAACAGGGAGGTGTGGACAAGCCAGTTTGATGCAG...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTCACATCAAACACAGCTaGCCGTCTCTCATGGCAATC +
Preference number: 5 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAHIKHS*PSLMAI
Trigger: GATTGCCATGAGAGACGGCAAGCTGTGTTTGATGTG...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATCTATGTGCCATCGGGTCACATGGAGACATGGTTAGTGCTTTATGCTAATCATGAAGTAATTCTGGATTaGAGGAGCTGTGCTCGAACA +
Preference number: 5 (lower is better)
Translates to: IYVPSGHMETWLVLYANHEVILD*RSCART
Trigger: TGTTCGAGCACAGCTCCTCAAATCCAGAATTACTTC...ATGATTAGCATAAAGCACTAACCATGTCTCCATGTGACCCGATGGCACATAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGCTGTCGTCTTCCTCTTaGCTTGTGAGGGCAACTTCA +
Preference number: 5 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIELSSSS*LVRATS
Trigger: TGAAGTTGCCCTCACAAGCAAAGAGGAAGACGACAG...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp TCCAACAGGGAATCTGCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCAATCAGGCTCTTGTTTaGGCAGTTAATAGCCAAATA +
Preference number: 5 (lower is better)
Translates to: SNRESACNREATHIWESTNQALV*AVNSQI
Trigger: TATTTGGCTATTAACTGCCAAAACAAGAGCCTGATT...GGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGCAGATTCCCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTAAAATTGTCATAGTTTaGCAGGCACGGCATTCAGAT +
Preference number: 5 (lower is better)
Translates to: ACNREATHIWESTPDIHGKIVIV*QARHSD
Trigger: ATCTGAATGCCGTGCCTGCAAAACTATGACAATTTT...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTTCTCAGGACAAGCTTTaGCTTTTACTGAGTGGTTTA +
Preference number: 5 (lower is better)
Translates to: ACNREATHIWESTPDIHGSQDKL*LLLSGL
Trigger: TAAACCACTCAGTAAAAGCAAAAGCTTGTCCTGAGA...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp ATTAGACACAGAGTGAAAAAGAACTCACTCTACTTCTCAGGACAAGCTTTTGCTAAAAGAGATTCTACTTaGCTGAGGGTTGGGGATGGG +
Preference number: 5 (lower is better)
Translates to: IRHRVKKNSLYFSGQAFAKRDST*LRVGDG
Trigger: CCCATCCCCAACCCTCAGCAAAGTAGAATCTCTTTT...AGCAAAAGCTTGTCCTGAGAAGTAGAGTGAGTTCTTTTTCACTCTGTGTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTTGTACAATCCATGGTTaGTGCAGTACAATAGGAAGA +
Preference number: 5 (lower is better)
Translates to: ACNREATHIWESTPDIHGCTIHG*CSTIGR
Trigger: TCTTCCTATTGTACTGCACAAACCATGGATTGTACA...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTAAACAGTCTGAGTTTTaGCAAAACGCTTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: ACNREATHIWESTPDIHGKQSEF*QNALEK
Trigger: TTTCTCCAAAGCGTTTTGCAAAAACTCAGACTGTTT...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS-3UTR CAA 90 bp GCTTGCAATAGAGAAGCAACACACATCTGGGAATCAACCCCAGATATTCATGGTAACATTGATGTCTATTaGATCCAGAGGGATATACTC +
Preference number: 5 (lower is better)
Translates to: ACNREATHIWESTPDIHGNIDVY*IQRDIL
Trigger: GAGTATATCCCTCTGGATCAAATAGACATCAATGTT...ACCATGAATATCTGGGGTTGATTCCCAGATGTGTGTTGCTTCTCTATTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS TCA 90 bp AATATACGATCGATTCCACTGTCAAACCCAACATTGATGTCTATTTaGTCCAGAGGGATATACTCCCCTTCAGAAGTAATTCTGGATTTG +
Preference number: 5 (lower is better)
Translates to: NIRSIPLSNPTLMSI*SRGIYSPSEVILDL
Trigger: CAAATCCAGAATTACTTCTGAAGGGGAGTATATCCCTCTGGATCAAATAGACATCAATGTTGGGTTTGACAGTGGAATCGATCGTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS-3UTR CAA 90 bp TTAAAAGGGAATAAATCCGAAGTAAATCCAACAGGGAATCTGCTTGCAATAGAGCAAAGTTATTGTCTCTaGATTTCAAGGCAGCCCATG +
Preference number: 5 (lower is better)
Translates to: LKGNKSEVNPTGNLLAIEQSYCL*ISRQPM
Trigger: CATGGGCTGCCTTGAAATCAAGAGACAATAACTTTG...CTCTATTGCAAGCAGATTCCCTGTTGGATTTACTTCGGATTTATTCCCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS CAA 90 bp GCGCCTAGGCTTCTCCGAAGGGTGGACGGCTCGTTCCCTCTCGCCTaGTCCGCCCTCAGTCTCTCCACCACCGCCCGGCACGCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: APRLLRRVDGSFPLA*SALSLSTTARHALL
Trigger: CAGCAAAGCGTGCCGGGCGGTGGTGGAGAGACTGAGGGCGGACAAGGCGAGAGGGAACGAGCCGTCCACCCTTCGGAGAAGCCTAGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535240.1
CDS CAA 72 bp CTTCTCCGAAGGGTGGACGGCTCGTTCCCTCTCGCCTaGTCCGCCCTCAGTCTCTCCACCACCGCCCGGCAC +
Preference number: 6 (lower is better)
Translates to: LLRRVDGSFPLA*SALSLSTTARH
Trigger: GTGCCGGGCGGTGGTGGAGAGACTGAGGGCGGACAAGGCGAGAGGGAACGAGCCGTCCACCCTTCGGAGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535240.1
CDS CCA 72 bp GAGAACATGTCAAGGCGCCTAGGCTTCTCCGAAGGGTaGACGGCTCGTTCCCTCTCGCCTTGTCCGCCCTCA +
Preference number: 6 (lower is better)
Translates to: ENMSRRLGFSEG*TARSLSPCPPS
Trigger: TGAGGGCGGACAAGGCGAGAGGGAACGAGCCGTCCACCCTTCGGAGAAGCCTAGGCGCCTTGACATGTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535240.1
CDS CAA 72 bp GCAGCCGTGAAGCTGTTGACCTCGGACACACAAGCTTaGCCCTCTTTGGATGCATCCAGGTCCCCATGGAGC +
Preference number: 6 (lower is better)
Translates to: AAVKLLTSDTQA*PSLDASRSPWS
Trigger: GCTCCATGGGGACCTGGATGCATCCAAAGAGGGCAAAGCTTGTGTGTCCGAGGTCAACAGCTTCACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CAA 72 bp ACTCTCGCCGTAAGGGCCTGGGCTCTAGAGGTACACTaGCCTGGTTGTGAAGGTCTATGTCAGGGGGCGTGT +
Preference number: 6 (lower is better)
Translates to: TLAVRAWALEVH*PGCEGLCQGAC
Trigger: ACACGCCCCCTGACATAGACCTTCACAACCAGGCAAGTGTACCTCTAGAGCCCAGGCCCTTACGGCGAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS TCA 72 bp AAGGGCCTGGGCTCTAGAGGTACACTTGCCTGGTTGTaGAGGTCTATGTCAGGGGGCGTGTCCGTACTAGTG +
Preference number: 6 (lower is better)
Translates to: KGLGSRGTLAWL*RSMSGGVSVLV
Trigger: CACTAGTACGGACACGCCCCCTGACATAGACCTTCACAACCAGGCAAGTGTACCTCTAGAGCCCAGGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CAA 90 bp AAGAGGAAGGCAGCCGTGAAGCTGTTGACCTCGGACACACAAGCTTaGCCCTCTTTGGATGCATCCAGGTCCCCATGGAGCAGAGCTATC +
Preference number: 6 (lower is better)
Translates to: KRKAAVKLLTSDTQA*PSLDASRSPWSRAI
Trigger: GATAGCTCTGCTCCATGGGGACCTGGATGCATCCAAAGAGGGCAAAGCTTGTGTGTCCGAGGTCAACAGCTTCACGGCTGCCTTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 72 bp CAGTCAGTCATATCTCCGACTCTCGCCGTAAGGGCCTaGGCTCTAGAGGTACACTTGCCTGGTTGTGAAGGT +
Preference number: 6 (lower is better)
Translates to: QSVISPTLAVRA*ALEVHLPGCEG
Trigger: ACCTTCACAACCAGGCAAGTGTACCTCTAGAGCCCAGGCCCTTACGGCGAGAGTCGGAGATATGACTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243457.4
CDS CAA 90 bp GCAGCCGTGAAGCTGTTGACCTCGGACACACAAGCTTTGCCCTCTTaGGATGCATCCAGGTCCCCATGGAGCAGAGCTATCAACCAAAAC +
Preference number: 6 (lower is better)
Translates to: AAVKLLTSDTQALPS*DASRSPWSRAINQN
Trigger: GTTTTGGTTGATAGCTCTGCTCCATGGGGACCTGGATGCATCCAAAGAGGGCAAAGCTTGTGTGTCCGAGGTCAACAGCTTCACGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CAA 72 bp AAGCTGTTGACCTCGGACACACAAGCTTTGCCCTCTTaGGATGCATCCAGGTCCCCATGGAGCAGAGCTATC +
Preference number: 6 (lower is better)
Translates to: KLLTSDTQALPS*DASRSPWSRAI
Trigger: GATAGCTCTGCTCCATGGGGACCTGGATGCATCCAAAGAGGGCAAAGCTTGTGTGTCCGAGGTCAACAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS GCA 72 bp TGGCCAACTTCATACCGTCTTCTTCTGAAGAGACGATaGTGTAGCGGTTGGTTCGCACACTGCCCATCGCTT +
Preference number: 6 (lower is better)
Translates to: WPTSYRLLLKRR*CSGWFAHCPSL
Trigger: AAGCGATGGGCAGTGTGCGAACCAACCGCTACAGCATCGTCTCTTCAGAAGAAGACGGTATGAAGTTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CAA 72 bp GTGGCCATCTTTCTTCACAAAGCGGCTCCTGCACTGTaGTCGGGTGTGGACTTTACTCTTCCCGTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: VAIFLHKAAPAL*SGVDFTLPVPK
Trigger: TTTGGGAACGGGAAGAGTAAAGTCCACACCCGACAACAGTGCAGGAGCCGCTTTGTGAAGAAAGATGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS GCA 72 bp GGTGTGGACTTTACTCTTCCCGTTCCCAAAGCCATTTaGAACTGCCATGGTGGCCAACTTCATACCGTCTTC +
Preference number: 6 (lower is better)
Translates to: GVDFTLPVPKAI*NCHGGQLHTVF
Trigger: GAAGACGGTATGAAGTTGGCCACCATGGCAGTTGCAAATGGCTTTGGGAACGGGAAGAGTAAAGTCCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS GCA 72 bp CATTACAGTGGCCATCTTTCTTCACAAAGCGGCTCCTaGACTGTTGTCGGGTGTGGACTTTACTCTTCCCGT +
Preference number: 6 (lower is better)
Translates to: HYSGHLSSQSGS*TVVGCGLYSSR
Trigger: ACGGGAAGAGTAAAGTCCACACCCGACAACAGTGCAGGAGCCGCTTTGTGAAGAAAGATGGCCACTGTAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 72 bp TTCTTCACAAAGCGGCTCCTGCACTGTTGTCGGGTGTaGACTTTACTCTTCCCGTTCCCAAAGCCATTTGCA +
Preference number: 6 (lower is better)
Translates to: FFTKRLLHCCRV*TLLFPFPKPFA
Trigger: TGCAAATGGCTTTGGGAACGGGAAGAGTAAAGTCCACACCCGACAACAGTGCAGGAGCCGCTTTGTGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CAA 72 bp GGGTGTGGACTTTACTCTTCCCGTTCCCAAAGCCATTaGCAACTGCCATGGTGGCCAACTTCATACCGTCTT +
Preference number: 6 (lower is better)
Translates to: GCGLYSSRSQSH*QLPWWPTSYRL
Trigger: AAGACGGTATGAAGTTGGCCACCATGGCAGTTGCAAATGGCTTTGGGAACGGGAAGAGTAAAGTCCACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CAA 90 bp ACTGTTGTCGGGTGTGGACTTTACTCTTCCCGTTCCCAAAGCCATTaGCAACTGCCATGGTGGCCAACTTCATACCGTCTTCTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: TVVGCGLYSSRSQSH*QLPWWPTSYRLLLK
Trigger: CTTCAGAAGAAGACGGTATGAAGTTGGCCACCATGGCAGTTGCAAATGGCTTTGGGAACGGGAAGAGTAAAGTCCACACCCGACAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CAA 90 bp AACATTACAGTGGCCATCTTTCTTCACAAAGCGGCTCCTGCACTGTaGTCGGGTGTGGACTTTACTCTTCCCGTTCCCAAAGCCATTTGC +
Preference number: 6 (lower is better)
Translates to: NITVAIFLHKAAPAL*SGVDFTLPVPKAIC
Trigger: GCAAATGGCTTTGGGAACGGGAAGAGTAAAGTCCACACCCGACAACAGTGCAGGAGCCGCTTTGTGAAGAAAGATGGCCACTGTAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS GCA 72 bp CTCCCCTTCAGAAGTAATTCTGGATTTGAGGAGCTGTaGTCGAACATGAGCTTCCACCAAGTGGCTTTTCCG +
Preference number: 6 (lower is better)
Translates to: LPFRSNSGFEEL*SNMSFHQVAFP
Trigger: CGGAAAAGCCACTTGGTGGAAGCTCATGTTCGAGCACAGCTCCTCAAATCCAGAATTACTTCTGAAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 72 bp TCTTCCCGTTCCCAAAGCCATTTGCAACTGCCATGGTaGCCAACTTCATACCGTCTTCTTCTGAAGAGACGA +
Preference number: 6 (lower is better)
Translates to: SSRSQSHLQLPW*PTSYRLLLKRR
Trigger: TCGTCTCTTCAGAAGAAGACGGTATGAAGTTGGCCACCATGGCAGTTGCAAATGGCTTTGGGAACGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 72 bp CAAGCTTTGCCCTCTTTGGATGCATCCAGGTCCCCATaGAGCAGAGCTATCAACCAAAACACACAGCCAAAA +
Preference number: 6 (lower is better)
Translates to: QALPSLDASRSP*SRAINQNTQPK
Trigger: TTTTGGCTGTGTGTTTTGGTTGATAGCTCTGCTCCATGGGGACCTGGATGCATCCAAAGAGGGCAAAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS TCA 72 bp GAAGTAATTCTGGATTTGAGGAGCTGTGCTCGAACATaGGCTTCCACCAAGTGGCTTTTCCGAAGATTGCCC +
Preference number: 6 (lower is better)
Translates to: EVILDLRSCART*ASTKWLFRRLP
Trigger: GGGCAATCTTCGGAAAAGCCACTTGGTGGAAGCTCATGTTCGAGCACAGCTCCTCAAATCCAGAATTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 72 bp AAAAATGAGGAGAGATGGGTGTCTCTGGGAGCCTTGTaGTTCTACCAAGGTCTGTCTACTGACATGCAGAGT +
Preference number: 6 (lower is better)
Translates to: KNEERWVSLGAL*FYQGLSTDMQS
Trigger: ACTCTGCATGTCAGTAGACAGACCTTGGTAGAACCACAAGGCTCCCAGAGACACCCATCTCTCCTCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 72 bp TACTCTTCCCGTTCCCAAAGCCATTTGCAACTGCCATaGTGGCCAACTTCATACCGTCTTCTTCTGAAGAGA +
Preference number: 6 (lower is better)
Translates to: YSSRSQSHLQLP*WPTSYRLLLKR
Trigger: TCTCTTCAGAAGAAGACGGTATGAAGTTGGCCACCATGGCAGTTGCAAATGGCTTTGGGAACGGGAAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS GCA 72 bp GAGCCTTGTGGTTCTACCAAGGTCTGTCTACTGACATaGAGAGTTACTTTAATGACTCAGCTGACATCCAGA +
Preference number: 6 (lower is better)
Translates to: EPCGSTKVCLLT*RVTLMTQLTSR
Trigger: TCTGGATGTCAGCTGAGTCATTAAAGTAACTCTGCATGTCAGTAGACAGACCTTGGTAGAACCACAAGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CCA 72 bp TTTCTGCTAAGTCTCTGGCACTACAAAGGGGAGTGTTaGGGACTTCGTAAGTTTTGTGGAACCTGGAATAGT +
Preference number: 6 (lower is better)
Translates to: FLLSLWHYKGEC*GLRKFCGTWNS
Trigger: ACTATTCCAGGTTCCACAAAACTTACGAAGTCCCCAACACTCCCCTTTGTAGTGCCAGAGACTTAGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS TCA 72 bp TCGATTCCACTGTCAAACCCAACATTGATGTCTATTTaGTCCAGAGGGATATACTCCCCTTCAGAAGTAATT +
Preference number: 6 (lower is better)
Translates to: SIPLSNPTLMSI*SRGIYSPSEVI
Trigger: AATTACTTCTGAAGGGGAGTATATCCCTCTGGATCAAATAGACATCAATGTTGGGTTTGACAGTGGAATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS TCA 72 bp GAAATATACGATCGATTCCACTGTCAAACCCAACATTaGTGTCTATTTGATCCAGAGGGATATACTCCCCTT +
Preference number: 6 (lower is better)
Translates to: EIYDRFHCQTQH*CLFDPEGYTPL
Trigger: AAGGGGAGTATATCCCTCTGGATCAAATAGACATCAATGTTGGGTTTGACAGTGGAATCGATCGTATATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CAA 72 bp ATCGATTCCACTGTCAAACCCAACATTGATGTCTATTaGATCCAGAGGGATATACTCCCCTTCAGAAGTAAT +
Preference number: 6 (lower is better)
Translates to: IDSTVKPNIDVY*IQRDILPFRSN
Trigger: ATTACTTCTGAAGGGGAGTATATCCCTCTGGATCAAATAGACATCAATGTTGGGTTTGACAGTGGAATCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1
CDS CAA 90 bp AAATATACGATCGATTCCACTGTCAAACCCAACATTGATGTCTATTaGATCCAGAGGGATATACTCCCCTTCAGAAGTAATTCTGGATTT +
Preference number: 6 (lower is better)
Translates to: KYTIDSTVKPNIDVY*IQRDILPFRSNSGF
Trigger: AAATCCAGAATTACTTCTGAAGGGGAGTATATCCCTCTGGATCAAATAGACATCAATGTTGGGTTTGACAGTGGAATCGATCGTATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243457.4
ENST00000535240.1