RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNJ15 (Homo sapiens)

Ensembl gene IDs: ENSG00000157551

Ensembl transcript IDs: ENST00000328656.8, ENST00000398925.5, ENST00000398927.1, ENST00000398928.5, ENST00000398930.5, ENST00000398932.5, ENST00000398934.5, ENST00000398938.7, ENST00000417042.5, ENST00000419868.1, ENST00000438657.5, ENST00000443341.5, ENST00000472602.1, ENST00000547341.5, ENST00000547595.5, ENST00000548700.5, ENST00000549158.5, ENST00000549805.5, ENST00000549932.5, ENST00000551422.5, ENST00000612702.4, ENST00000613499.4

Found 959 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTTGAGAATCTGGGCTCCTGTGCACCCACGTGGAGGGCGACTTTaGGCCCATCCTTCTAGGGTGATGCCCCAGGGAAGACCATTCCTC +
Preference number: 1 (lower is better)
Translates to: GLRIWAPVHPRGGRL*AHPSRVMPQGRPFL
Trigger: GAGGAATGGTCTTCCCTGGGGCATCACCCTAGAAGGATGGGCTCAAAGTCGCCCTCCACGTGGGTGCACAGGAGCCCAGATTCTCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CCA 90 bp GGGAGCCAATGCATGACTCCCAACCCCATCCCAAAGGAGTGGGGTTaGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAGGC +
Preference number: 1 (lower is better)
Translates to: GSQCMTPNPIPKEWG*VTQCFAVQSHCLPG
Trigger: GCCTGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTTTGGGATGGGGTTGGGAGTCATGCATTGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR TCA 90 bp CTGTGCACCCACGTGGAGGGCGACTTTGAGCCCATCCTTCTAGGGTaGTGCCCCAGGGAAGACCATTCCTCACTATGGAGACTCAGACAG +
Preference number: 1 (lower is better)
Translates to: LCTHVEGDFEPILLG*CPREDHSSLWRLRQ
Trigger: CTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCCTGGGGCATCACCCTAGAAGGATGGGCTCAAAGTCGCCCTCCACGTGGGTGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 90 bp CCAGGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTaGTCCACACTGCACACAGGAGTGTCAAAGACTGGGTTCCCCGTG +
Preference number: 1 (lower is better)
Translates to: PGKTIPHYGDSDSAR*STLHTGVSKTGFPV
Trigger: CACGGGGAACCCAGTCTTTGACACTCCTGTGTGCAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CCA 90 bp GAAAAAGGGAGCCAATGCATGACTCCCAACCCCATCCCAAAGGAGTaGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTG +
Preference number: 1 (lower is better)
Translates to: EKGSQCMTPNPIPKE*GWVTQCFAVQSHCL
Trigger: CAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTTTGGGATGGGGTTGGGAGTCATGCATTGGCTCCCTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 90 bp CCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTaGACACAGGAGTGTCAAAGACTGGGTTCCCCGTGTTCAGCTGAA +
Preference number: 1 (lower is better)
Translates to: PFLTMETQTVHAAPH*TQECQRLGSPCSAE
Trigger: TTCAGCTGAACACGGGGAACCCAGTCTTTGACACTCCTGTGTGCAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CCA 90 bp AGACAGTGCACGCTGCTCCACACTGCACACAGGAGTGTCAAAGACTaGGTTCCCCGTGTTCAGCTGAAATTTTCCCTTGATAATTGGGCA +
Preference number: 1 (lower is better)
Translates to: RQCTLLHTAHRSVKD*VPRVQLKFSLDNWA
Trigger: TGCCCAATTATCAAGGGAAAATTTCAGCTGAACACGGGGAACCCAGTCTTTGACACTCCTGTGTGCAGTGTGGAGCAGCGTGCACTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CCA 90 bp AATTCCTCAAAAATGGATCCAAGTCGGCTGCTATCCTTCCTCTCCTaGCTGCTACGTAACACTTCGTGTCAGTACACAAACACAGCTTCC +
Preference number: 1 (lower is better)
Translates to: NSSKMDPSRLLSFLS*LLRNTSCQYTNTAS
Trigger: GGAAGCTGTGTTTGTGTACTGACACGAAGTGTTACGTAGCAGCCAGGAGAGGAAGGATAGCAGCCGACTTGGATCCATTTTTGAGGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR TCA 90 bp ACACTGCACACAGGAGTGTCAAAGACTGGGTTCCCCGTGTTCAGCTaGAATTTTCCCTTGATAATTGGGCAAGCCAGGGAAATATGTTTC +
Preference number: 1 (lower is better)
Translates to: TLHTGVSKTGFPVFS*NFPLIIGQAREICF
Trigger: GAAACATATTTCCCTGGCTTGCCCAATTATCAAGGGAAAATTTCAGCTGAACACGGGGAACCCAGTCTTTGACACTCCTGTGTGCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 90 bp TACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTaGTTTGAGAACACTGTCCAGAGCACAGCTTTCGAACTTTCATTT +
Preference number: 1 (lower is better)
Translates to: YGTHTESVFHTASES*FENTVQSTAFELSF
Trigger: AAATGAAAGTTCGAAAGCTGTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR CCA 90 bp CCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTaGGTGTTGAGTGTGAATCTGTTTCAAGCAGAAGACCGACCAGAT +
Preference number: 1 (lower is better)
Translates to: PFWVRNTPLLWLLLS*VLSVNLFQAEDRPD
Trigger: ATCTGGTCGGTCTTCTGCTTGAAACAGATTCACACTCAACACCCAACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR TCA 90 bp GACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTaGGAACACTGTCCAGAGCACAGCTTTCGAACTTTCATTTGTACA +
Preference number: 1 (lower is better)
Translates to: DPHRVSFPHGFRKLL*EHCPEHSFRTFICT
Trigger: TGTACAAATGAAAGTTCGAAAGCTGTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR CCA 90 bp CATCTTGTTTATGAGTTTCTTACCTTCAGCTCCTCTTCTTCCTCATaGCCCCACCGGACCTTACAAACATCAGCATCTGAGAACATTTCC +
Preference number: 1 (lower is better)
Translates to: HLVYEFLTFSSSSSS*PHRTLQTSASENIS
Trigger: GGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGTAAGAAACTCATAAACAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR CCA 90 bp AAAGACTGGGTTCCCCGTGTTCAGCTGAAATTTTCCCTTGATAATTaGGCAAGCCAGGGAAATATGTTTCTGGAATACTCCCTGACTCTA +
Preference number: 1 (lower is better)
Translates to: KDWVPRVQLKFSLDN*ASQGNMFLEYSLTL
Trigger: TAGAGTCAGGGAGTATTCCAGAAACATATTTCCCTGGCTTGCCCAATTATCAAGGGAAAATTTCAGCTGAACACGGGGAACCCAGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 90 bp TCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATTTCGAGTaGACACCACAAAACTTGGAAATCAAGACTGGAAATGTTAGTACC +
Preference number: 1 (lower is better)
Translates to: SCTYPEFNNQRLDFE*TPQNLEIKTGNVST
Trigger: GGTACTAACATTTCCAGTCTTGATTTCCAAGTTTTGTGGTGTGCACTCGAAATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 90 bp ATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTaGCAGGAGTTACAAGCAGTGGGATTGTTTGCATATAAAATCTAC +
Preference number: 1 (lower is better)
Translates to: IARDLSVIKILVSTH*QELQAVGLFAYKIY
Trigger: GTAGATTTTATATGCAAACAATCCCACTGCTTGTAACTCCTGGCAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 90 bp AGGGAGCCAATGCATGACTCCCAACCCCATCCCAAAGGAGTGGGGTaGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: REPMHDSQPHPKGVG*GDSVLCCPEPLSAR
Trigger: CCTGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTTTGGGATGGGGTTGGGAGTCATGCATTGGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGGAGGCCAGGTCTGGATaGCACAGGGATACGGGACCC +
Preference number: 2 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLEARSG*HRDTGP
Trigger: GGGTCCCGTATCCCTGTGGCATCCAGACCTGGCCTC...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGTCTGCACATACAGAGTaGCTGGCAGCCCTAGCTCTC +
Preference number: 2 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLSAHTE*LAALAL
Trigger: GAGAGCTAGGGCTGCCAGGCACTCTGTATGTGCAGA...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCATGGCTCCTCCTTAGTTaGGTGTTGAGTGTGAATCTG +
Preference number: 2 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPWLLLS*VLSVNL
Trigger: CAGATTCACACTCAACACCCAACTAAGGAGGAGCCA...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR GCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAACGGCTTCAGAAAGTTaGTTTGAGAACACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPTASES*FENTVQ
Trigger: CTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGT...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 2 (lower is better)
Translates to: MPQGYGTHTESVFHTASEDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 2 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGGAGGCCAGGTCTGGATaGCACAGGGATACGGGACCC +
Preference number: 2 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMEARSG*HRDTGP
Trigger: GGGTCCCGTATCCCTGTGGCATCCAGACCTGGCCTC...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 90 bp TGTCCAGAGCCACTGTCTGCCAGGCACCATGTGAGCACTATTTTATaGCTGAATAAGACGTGGCTTGTGGGGCACACTGATTTACTGCTG +
Preference number: 2 (lower is better)
Translates to: CPEPLSARHHVSTIL*LNKTWLVGHTDLLL
Trigger: CAGCAGTAAATCAGTGTGCCCCACAAGCCACGTCTTATTCAGCAATAAAATAGTGCTCACATGGTGCCTGGCAGACAGTGGCTCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATGTCCGTGCAGTTTTTaGGAGTGCGTCTACACATTT +
Preference number: 2 (lower is better)
Translates to: MPQGYGTHTESVFHTASECPCSF*ECVYTF
Trigger: AAATGTGTAGACGCACTCTCAAAAACTGCACGGACA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATGTCCGTGCAGTTTTTaGGAGTGCGTCTACACATTT +
Preference number: 2 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSACPCSF*ECVYTF
Trigger: AAATGTGTAGACGCACTCTCAAAAACTGCACGGACA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATTCAGAAAGTTGCTTTaGGAACACTGTCCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAFRKLL*EHCPEH
Trigger: GTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGTGGCCACATTCTGCTTaGGTGAATGCGCAAATCTGT +
Preference number: 2 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAWPHSA*VNAQIC
Trigger: ACAGATTTGCGCATTCACTCAAGCAGAATGTGGCCA...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR GCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACAGGGGATAATCCTATaGAGTTCCTTTATGGGCAAG +
Preference number: 2 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAQGIIL*SSFMGK
Trigger: CTTGCCCATAAAGGAACTGCATAGGATTATCCCCTG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATGAGGCCAGGTCTGGATaGCACAGGGATACGGGACCC +
Preference number: 2 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDEARSG*HRDTGP
Trigger: GGGTCCCGTATCCCTGTGGCATCCAGACCTGGCCTC...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGAAGAGCCAGGGCCTGTaGAAGTGTGTGCGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMKSQGL*KCVRVC
Trigger: GCACACACGCACACACTTGCACAGGCCCTGGCTCTT...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 2 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGATCAGCAAGCATGACTaGGACAACAATTACTCTCAA +
Preference number: 2 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLISKHD*DNNYSQ
Trigger: TTGAGAGTAATTGTTGTCTCAGTCATGCTTGCTGAT...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGACCCACCAATCTATTTaGCTTTATAGAATGAACAGC +
Preference number: 2 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLTHQSI*LYRMNS
Trigger: GCTGTTCATTCTATAAAGTCAAATAGATTGGTGGGT...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGCTTTGCCTACATATATaGCATCGTTGGCTTTTATAC +
Preference number: 2 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLLCLHI*HRWLLY
Trigger: GTATAAAAGCCAACGATGTCATATATGTAGGCAAAG...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR GCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 2 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGTTCATGGCCACATTCTaGTTGAGTGAATGCGCAAAT +
Preference number: 2 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAFMATF*LSECAN
Trigger: ATTTGCGCATTCACTCAAGCAGAATGTGGCCATGAA...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR GCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCATATTTGTCAAGGACTTaGTGTCTTAACCTCAAATGT +
Preference number: 2 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPYLSRT*CLNLKC
Trigger: ACATTTGAGGTTAAGACAGCAAGTCCTTGACAAATA...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 90 bp GGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTaGAGAACACTGTCCAGAGCACAGCTTTCGAACTTTCATTTGTAC +
Preference number: 2 (lower is better)
Translates to: GPTQSQFSTRLQKVA*RTLSRAQLSNFHLY
Trigger: GTACAAATGAAAGTTCGAAAGCTGTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTGTCCGTGCAGTTTTTaGGAGTGCGTCTACACATTT +
Preference number: 2 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHCPCSF*ECVYTF
Trigger: AAATGTGTAGACGCACTCTCAAAAACTGCACGGACA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGGAGATCAATGAATACTaGACCACAATTCAACTCTCA +
Preference number: 2 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLEINEY*TTIQLS
Trigger: TGAGAGTTGAATTGTGGTTCAGTATTCATTGATCTC...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGAGGTTTCCACAGTTGTaGATTACAGATCTGATCAAT +
Preference number: 2 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLRFPQL*ITDLIN
Trigger: ATTGATCAGATCTGTAATTCACAACTGTGGAAACCT...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAAGGTTTCCACAGTTGTaGATTACAGATCTGATCAAT +
Preference number: 2 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSARFPQL*ITDLIN
Trigger: ATTGATCAGATCTGTAATTCACAACTGTGGAAACCT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 2 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTGTCCGTGCAGTTTTTaGGAGTGCGTCTACACATTT +
Preference number: 2 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAICPCSF*ECVYTF
Trigger: AAATGTGTAGACGCACTCTCAAAAACTGCACGGACA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTCAGAAAGTTGCTTTaGGAACACTGTCCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIFRKLL*EHCPEH
Trigger: GTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCAGGGGATAATCCTATaGAGTTCCTTTATGGGCAAG +
Preference number: 2 (lower is better)
Translates to: HRTLQTSASENISCIVRQQGIIL*SSFMGK
Trigger: CTTGCCCATAAAGGAACTGCATAGGATTATCCCCTG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGAGGGCACTAGACCCCTaGATTTGGCCCGGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLRALDP*IWPGAK
Trigger: TTTTGCCCCGGGCCAAATTCAGGGGTCTAGTGCCCT...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTAAGGGCACTAGACCCCTaGATTTGGCCCGGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLRALDP*IWPGAK
Trigger: TTTTGCCCCGGGCCAAATTCAGGGGTCTAGTGCCCT...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGCCCATCCTTCTAGGGTaGTGCCCCAGGGAAGACCAT +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLPILLG*CPREDH
Trigger: ATGGTCTTCCCTGGGGCATCACCCTAGAAGGATGGG...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR GCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGAAGAGCCAGGGCCTGTaGAAGTGTGTGCGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLKSQGL*KCVRVC
Trigger: GCACACACGCACACACTTGCACAGGCCCTGGCTCTT...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 2 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTGACCATTCCTCACTATaGAGACTCAGACAGTGCACG +
Preference number: 2 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIDHSSL*RLRQCT
Trigger: CGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTC...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGTCCGTGCAGTTTTTaGGAGTGCGTCTACACATTT +
Preference number: 2 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGCPCSF*ECVYTF
Trigger: AAATGTGTAGACGCACTCTCAAAAACTGCACGGACA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTATAAGACGTGGCTTGTaGGGCACACTGATTTACTGC +
Preference number: 2 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIIRRGL*GTLIYC
Trigger: GCAGTAAATCAGTGTGCCCCACAAGCCACGTCTTAT...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATCCAAAGGAGTGGGGTTaGGTGACTCAGTGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDPKEWG*VTQCFA
Trigger: AGCAAAGCACTGAGTCACCCAACCCCACTCCTTTGG...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 90 bp AGCGTGAGAGTATTCACTGTGCCATGTGGTCAAATGTCTGACATTTaGAACATCATGACAGCATATAGAACCAAACCTAGTCAAAGGCCT +
Preference number: 2 (lower is better)
Translates to: SVRVFTVPCGQMSDI*NIMTAYRTKPSQRP
Trigger: AGGCCTTTGACTAGGTTTGGTTCTATATGCTGTCATGATGTTCAAAATGTCAGACATTTGACCACATGGCACAGTGAATACTCTCACGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 2 (lower is better)
Translates to: HRTLQTSASENISCIVRQIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGAGATCAATGAATACTaGACCACAATTCAACTCTCA +
Preference number: 2 (lower is better)
Translates to: HRTLQTSASENISCIVRQEINEY*TTIQLS
Trigger: TGAGAGTTGAATTGTGGTTCAGTATTCATTGATCTC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTAGGTTTCCACAGTTGTaGATTACAGATCTGATCAAT +
Preference number: 2 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIRFPQL*ITDLIN
Trigger: ATTGATCAGATCTGTAATTCACAACTGTGGAAACCT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGCCAATAATAATGAAATaGAGAGAGGCCAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMPIIMK*REARSG
Trigger: TCCAGACCTGGCCTCTCTTCATTTCATTATTATTGG...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGCAGATCACGAGGTCATaGGATCGAGACCATCCTGGT +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLQITRS*DRDHPG
Trigger: ACCAGGATGGTCTCGATCTCATGACCTCGTGATCTG...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTGCACTATTTTATTGCTaGATAAGACGTGGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIALFYC*IRRGLW
Trigger: CCACAAGCCACGTCTTATTCAGCAATAAAATAGTGC...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 2 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATACGGCTTCAGAAAGTTaGTTTGAGAACACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDTASES*FENTVQ
Trigger: CTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGCTATCCTTCCTCTCCTaGCTGCTACGTAACACTTCG +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLLSFLS*LLRNTS
Trigger: CGAAGTGTTACGTAGCAGCCAGGAGAGGAAGGATAG...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 90 bp TCAGCAAGCATGACTGAGACAACAATTACTCTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATG +
Preference number: 2 (lower is better)
Translates to: SASMTETTITLKSFI*LLECQGIILCSSFM
Trigger: CATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAGAGTAATTGTTGTCTCAGTCATGCTTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR CAA 90 bp GATGTGGTTCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTaGGTAAGTACACACTGCCAGGAGTTACAAGCAGTGGGATTGTTT +
Preference number: 2 (lower is better)
Translates to: DVVLYIARDLSVIKI*VSTHCQELQAVGLF
Trigger: AAACAATCCCACTGCTTGTAACTCCTGGCAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGAACCACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 2 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCGAGATCAATGAATACTaGACCACAATTCAACTCTCA +
Preference number: 2 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGEINEY*TTIQLS
Trigger: TGAGAGTTGAATTGTGGTTCAGTATTCATTGATCTC...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCAGGTTTCCACAGTTGTaGATTACAGATCTGATCAAT +
Preference number: 2 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGRFPQL*ITDLIN
Trigger: ATTGATCAGATCTGTAATTCACAACTGTGGAAACCT...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTATTTCACTGATAACCTaGATCCACTTTATTTTCCCC +
Preference number: 2 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVISLIT*IHFIFP
Trigger: GGGGAAAATAAAGTGGATTCAGGTTATCAGTGAAAT...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATCCAAAATTGAGAGCGTaGGAGTATTCACTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDPKLRA*EYSLCH
Trigger: ATGGCACAGTGAATACTCTCACGCTCTCAATTTTGG...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATTTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 2 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR CAA 90 bp AAGATTTTGGTAAGTACACACTGCCAGGAGTTACAAGCAGTGGGATaGTTTGCATATAAAATCTACATGTCATTTGGGATTTCCATCACC +
Preference number: 2 (lower is better)
Translates to: KILVSTHCQELQAVG*FAYKIYMSFGISIT
Trigger: GGTGATGGAAATCCCAAATGACATGTAGATTTTATATGCAAACAATCCCACTGCTTGTAACTCCTGGCAGTGTGTACTTACCAAAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 2 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGTTCAGAAAGTTGCTTTaGGAACACTGTCCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLFRKLL*EHCPEH
Trigger: GTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAA...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTATATGTATGCAGGGGCTaGATATTCATGGCCACATTC +
Preference number: 2 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLYVCRG*IFMATF
Trigger: GAATGTGGCCATGAATATTCAGCCCCTGCATACATA...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR GCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTTTCTGCTTGAGTGAATaGGCAAATCTGTCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIFCLSE*ANLSLF
Trigger: AAACAAAGACAGATTTGCGCATTCACTCAAGCAGAA...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACTTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 2 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTATTCAAAAGCCTTTTTaGGTCAGGAATACTCCACTA +
Preference number: 2 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIIQKPF*VRNTPL
Trigger: TAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAAT...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATAGGTTTCCACAGTTGTaGATTACAGATCTGATCAAT +
Preference number: 2 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDRFPQL*ITDLIN
Trigger: ATTGATCAGATCTGTAATTCACAACTGTGGAAACCT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGGCACTATTTTATTGCTaGATAAGACGTGGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLALFYC*IRRGLW
Trigger: CCACAAGCCACGTCTTATTCAGCAATAAAATAGTGC...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTATTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 2 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGGAAATTTTAAGTAGGTaGGAAGGCATGGACACCAGA +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLEILSR*EGMDTR
Trigger: TCTGGTGTCCATGCCTTCCCACCTACTTAAAATTTC...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 2 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGAGATCAATGAATACTaGACCACAATTCAACTCTCA +
Preference number: 2 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYEINEY*TTIQLS
Trigger: TGAGAGTTGAATTGTGGTTCAGTATTCATTGATCTC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR GCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGTCAAGAGCTTTATTTTaGTCTTGGAATGTCAGGGGA +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLSRALF*SWNVRG
Trigger: TCCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGA...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGGAAATGGGCATAGTTTaGGATTATGTGAACACTCTT +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLEMGIV*DYVNTL
Trigger: AAGAGTGTTCACATAATCCCAAACTATGCCCATTTC...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGAGGAGTTACAAGCAGTaGGATTGTTTGCATATAAAA +
Preference number: 2 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLRSYKQ*DCLHIK
Trigger: TTTTATATGCAAACAATCCCACTGCTTGTAACTCCT...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 72 bp TGGAAGCGGACTTGCAGTGAGCCGAAATCGCGCCACTaGACTCTAGCAGCCTGGGCGACAGAGCGAGACCCA +
Preference number: 3 (lower is better)
Translates to: WKRTCSEPKSRH*TLAAWATERDP
Trigger: TGGGTCTCGCTCTGTCGCCCAGGCTGCTAGAGTGCAGTGGCGCGATTTCGGCTCACTGCAAGTCCGCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CCA 72 bp TGCATGACTCCCAACCCCATCCCAAAGGAGTGGGGTTaGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGT +
Preference number: 3 (lower is better)
Translates to: CMTPNPIPKEWG*VTQCFAVQSHC
Trigger: ACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTTTGGGATGGGGTTGGGAGTCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CCA 72 bp AGCCAATGCATGACTCCCAACCCCATCCCAAAGGAGTaGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGC +
Preference number: 3 (lower is better)
Translates to: SQCMTPNPIPKE*GWVTQCFAVQS
Trigger: GCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTTTGGGATGGGGTTGGGAGTCATGCATTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 72 bp ACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTaGACACAGGAGTGTCAAAGACTGGGTTCCCCGTGT +
Preference number: 3 (lower is better)
Translates to: TMETQTVHAAPH*TQECQRLGSPC
Trigger: ACACGGGGAACCCAGTCTTTGACACTCCTGTGTGCAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 72 bp AGGGAAGACCATTCCTCACTATGGAGACTCAGACAGTaGACGCTGCTCCACACTGCACACAGGAGTGTCAAA +
Preference number: 3 (lower is better)
Translates to: REDHSSLWRLRQ*TLLHTAHRSVK
Trigger: TTTGACACTCCTGTGTGCAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAATGTCCGTGCAGTTTTaGAGAGTGCGTCTACACATT +
Preference number: 3 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPMSVQF*RVRLHI
Trigger: AATGTGTAGACGCACTCTCAAAAACTGCACGGACAT...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 72 bp TGGATCCAAGTCGGCTGCTATCCTTCCTCTCCTGGCTaGTACGTAACACTTCGTGTCAGTACACAAACACAG +
Preference number: 3 (lower is better)
Translates to: WIQVGCYPSSPG*YVTLRVSTQTQ
Trigger: CTGTGTTTGTGTACTGACACGAAGTGTTACGTAGCAGCCAGGAGAGGAAGGATAGCAGCCGACTTGGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CCA 72 bp ACGCTGCTCCACACTGCACACAGGAGTGTCAAAGACTaGGTTCCCCGTGTTCAGCTGAAATTTTCCCTTGAT +
Preference number: 3 (lower is better)
Translates to: TLLHTAHRSVKD*VPRVQLKFSLD
Trigger: ATCAAGGGAAAATTTCAGCTGAACACGGGGAACCCAGTCTTTGACACTCCTGTGTGCAGTGTGGAGCAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAATGTCCGTGCAGTTTTaGAGAGTGCGTCTACACATT +
Preference number: 3 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAMSVQF*RVRLHI
Trigger: AATGTGTAGACGCACTCTCAAAAACTGCACGGACAT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACTTCAGAAAGTTGCTTaGAGAACACTGTCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSALQKVA*RTLSRA
Trigger: TGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGCTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGG +
Preference number: 3 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLLKSFI*LLECQG
Trigger: CCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAG...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAACTGATTTACTGCTGTaGACTCTGGTTTCTCAAATG +
Preference number: 3 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPTDLLL*TLVSQM
Trigger: CATTTGAGAAACCAGAGTCAACAGCAGTAAATCAGT...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGTTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTG +
Preference number: 3 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLFSQQS*CLKGVL
Trigger: CAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAA...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSARTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR CCA 72 bp AAAATGGATCCAAGTCGGCTGCTATCCTTCCTCTCCTaGCTGCTACGTAACACTTCGTGTCAGTACACAAAC +
Preference number: 3 (lower is better)
Translates to: KMDPSRLLSFLS*LLRNTSCQYTN
Trigger: GTTTGTGTACTGACACGAAGTGTTACGTAGCAGCCAGGAGAGGAAGGATAGCAGCCGACTTGGATCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTG +
Preference number: 3 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAFSQQS*CLKGVL
Trigger: CAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGATGTCCGTGCAGTTTTaGAGAGTGCGTCTACACATT +
Preference number: 3 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLMSVQF*RVRLHI
Trigger: AATGTGTAGACGCACTCTCAAAAACTGCACGGACAT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGCTTTCGAACTTTCATTaGTACACAAATCATCTGGGG +
Preference number: 3 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCALSNFH*YTNHLG
Trigger: CCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAG...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR TCA 72 bp CTCATGGCCCCACCGGACCTTACAAACATCAGCATCTaGGAACATTTCCTGTATTGTCAGGCAGCTGAATTT +
Preference number: 3 (lower is better)
Translates to: LMAPPDLTNISI*EHFLYCQAAEF
Trigger: AAATTCAGCTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGATGTCCGTGCAGTTTTaGAGAGTGCGTCTACACATT +
Preference number: 3 (lower is better)
Translates to: HRTLQTSASENISCIVRQMSVQF*RVRLHI
Trigger: AATGTGTAGACGCACTCTCAAAAACTGCACGGACAT...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATCCCAAAGGAGTGGGGTaGGGTGACTCAGTGCTTTGC +
Preference number: 3 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDPKGVG*GDSVLC
Trigger: GCAAAGCACTGAGTCACCCAACCCCACTCCTTTGGG...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR TCA 72 bp AGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTaGGAACACTGTCCAGAGCACAGCTTTCGAACTTTC +
Preference number: 3 (lower is better)
Translates to: RVSFPHGFRKLL*EHCPEHSFRTF
Trigger: GAAAGTTCGAAAGCTGTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR TCA 72 bp GGAGGGATAGCATTAGGAGATATACCTAATGCTAAATaGCGAGTTAATGGGTGCAGCACACCAACATGGCAC +
Preference number: 3 (lower is better)
Translates to: GGIALGDIPNAK*RVNGCSTPTWH
Trigger: GTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTCCTAATGCTATCCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR TCA 72 bp TTGGGTTCAGTGATGACAGAGTATCCACAGTTAGTGTaGGATTTCCGACATGCACCAAATAGTAGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: LGSVMTEYPQLV*DFRHAPNSSSA
Trigger: GGCTGAGCTACTATTTGGTGCATGTCGGAAATCTCACACTAACTGTGGATACTCTGTCATCACTGAACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CCA 72 bp CAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTaGCTCCTCCTTAGTTGGGTGTTGAGTGTGAATCTG +
Preference number: 3 (lower is better)
Translates to: QKPFWVRNTPLL*LLLSWVLSVNL
Trigger: CAGATTCACACTCAACACCCAACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: HRTLQTSASENISCIVRQRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR TCA 72 bp GGAATCATGCGTACATCTTTGTATGTATGCAGGGGCTaGATATTCATGGCCACATTCTGCTTGAGTGAATGC +
Preference number: 3 (lower is better)
Translates to: GIMRTSLYVCRG*IFMATFCLSEC
Trigger: GCATTCACTCAAGCAGAATGTGGCCATGAATATTCAGCCCCTGCATACATACAAAGATGTACGCATGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 72 bp ATTACTCCATATAGGACATATTCTGCACATACAGAGTaGCTGGCAGCCCTAGCTCTCTGGCATTATATTCAG +
Preference number: 3 (lower is better)
Translates to: ITPYRTYSAHTE*LAALALWHYIQ
Trigger: CTGAATATAATGCCAGAGAGCTAGGGCTGCCAGGCACTCTGTATGTGCAGAATATGTCCTATATGGAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 72 bp ACAGAAATAATTCCTCAAAAATGGATCCAAGTCGGCTaGTATCCTTCCTCTCCTGGCTGCTACGTAACACTT +
Preference number: 3 (lower is better)
Translates to: TEIIPQKWIQVG*YPSSPGCYVTL
Trigger: AAGTGTTACGTAGCAGCCAGGAGAGGAAGGATAGCAGCCGACTTGGATCCATTTTTGAGGAATTATTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTG +
Preference number: 3 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIFSQQS*CLKGVL
Trigger: CAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTG +
Preference number: 3 (lower is better)
Translates to: HRTLQTSASENISCIVRQFSQQS*CLKGVL
Trigger: CAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCATGTCCGTGCAGTTTTaGAGAGTGCGTCTACACATT +
Preference number: 3 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGMSVQF*RVRLHI
Trigger: AATGTGTAGACGCACTCTCAAAAACTGCACGGACAT...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCTTTCGAACTTTCATTaGTACACAAATCATCTGGGG +
Preference number: 3 (lower is better)
Translates to: HRTLQTSASENISCIVRQLSNFH*YTNHLG
Trigger: CCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTCTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGG +
Preference number: 3 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVLKSFI*LLECQG
Trigger: CCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAG...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGCTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGG +
Preference number: 3 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMLKSFI*LLECQG
Trigger: CCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAG...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR GCA 72 bp GACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTaGCAGGAGTTACAAGCAGTGGGATTGTTTGCATAT +
Preference number: 3 (lower is better)
Translates to: DLSVIKILVSTH*QELQAVGLFAY
Trigger: ATATGCAAACAATCCCACTGCTTGTAACTCCTGGCAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CCA 72 bp TACACATTACTAATAAGCTCTCGGATGGTGCTGATGTaGCGGGTCTGTGAACCACATTTTGAATGGAAATAT +
Preference number: 3 (lower is better)
Translates to: YTLLISSRMVLM*RVCEPHFEWKY
Trigger: ATATTTCCATTCAAAATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTCTTTCGAACTTTCATTaGTACACAAATCATCTGGGG +
Preference number: 3 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVLSNFH*YTNHLG
Trigger: CCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAG...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTAGCTTTATTTTGCTCTaGGAATGTCAGGGGATAATC +
Preference number: 3 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVSFILL*ECQGII
Trigger: GATTATCCCCTGACATTCCAAGAGCAAAATAAAGCT...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACATGTCCGTGCAGTTTTaGAGAGTGCGTCTACACATT +
Preference number: 3 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYMSVQF*RVRLHI
Trigger: AATGTGTAGACGCACTCTCAAAAACTGCACGGACAT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTAGCTTTATTTTGCTCTaGGAATGTCAGGGGATAATC +
Preference number: 3 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLISFILL*ECQGII
Trigger: GATTATCCCCTGACATTCCAAGAGCAAAATAAAGCT...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR TCA 72 bp ATAGAAGAAAAGTCTAGCAAGAATGAAAGCCAAAATTaGGAGCGTGAGAGTATTCACTGTGCCATGTGGTCA +
Preference number: 3 (lower is better)
Translates to: IEEKSSKNESQN*ERESIHCAMWS
Trigger: TGACCACATGGCACAGTGAATACTCTCACGCTCTCAATTTTGGCTTTCATTCTTGCTAGACTTTTCTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR GCA 72 bp TACCCAGAGTTTAACAATCAGAGACTAGATTTCGAGTaGACACCACAAAACTTGGAAATCAAGACTGGAAAT +
Preference number: 3 (lower is better)
Translates to: YPEFNNQRLDFE*TPQNLEIKTGN
Trigger: ATTTCCAGTCTTGATTTCCAAGTTTTGTGGTGTGCACTCGAAATCTAGTCTCTGATTGTTAAACTCTGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR-3UTR CAA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTG +
Preference number: 3 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIFSQQS*CLKGVL
Trigger: CAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR-3UTR CAA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR TCA 72 bp AAAGCCGCTGATACAGTCATACTTCCTGTAATGATTTaGTGTAATACGACATCCTTAATCCTGAGATTTGAT +
Preference number: 3 (lower is better)
Translates to: KAADTVILPVMI*CNTTSLILRFD
Trigger: ATCAAATCTCAGGATTAAGGATGTCGTATTACATCAAATCATTACAGGAAGTATGACTGTATCAGCGGCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAGGGGTCTGTTGGCCTTaGGCCCAGCCCCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPGVCWP*AQPQQC
Trigger: ACACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCC...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGGGGTCTGTTGGCCTTaGGCCCAGCCCCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEGVCWP*AQPQQC
Trigger: ACACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGCTCCCCCTCCTTGGTaGCGTGGGTCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEAPPPW*RGSAGA
Trigger: AGCTCCTGCAGACCCACGTCACCAAGGAGGGGGAGC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGGCCCACTCTTGGACATaGCGCGGGGTCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLAHSWT*RGVCWP
Trigger: AGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGC...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGAGGCCAGGTCTGGATaGCACAGGGATACGGGACCC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEEARSG*HRDTGP
Trigger: GGGTCCCGTATCCCTGTGGCATCCAGACCTGGCCTC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAGAGGCCAGGTCTGGATaGCACAGGGATACGGGACCC +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAEARSG*HRDTGP
Trigger: GGGTCCCGTATCCCTGTGGCATCCAGACCTGGCCTC...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGGAATCTGGGCTCCTGTaGACCCACGTGGAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLESGLL*THVEGD
Trigger: GTCGCCCTCCACGTGGGTGCACAGGAGCCCAGATTC...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCATGGATGGCGCCCCTGTaGTCAGACATTGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPWMAPL*SDIALL
Trigger: CAACAGAGCAATGTCTGATCACAGGGGCGCCATCCA...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGCGTGGAGGGCGACTTTaGGCCCATCCTTCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLRGGRL*AHPSRV
Trigger: CACCCTAGAAGGATGGGCTCAAAGTCGCCCTCCACG...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACCCTCCTTGGTGACGTaGGTCTGCAGGAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAPSLVT*VCRSLP
Trigger: TGGCAAGCTCCTGCAGACCCACGTCACCAAGGAGGG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATCCTGTGCACCCACGTaGAGGGCGACTTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASESCAPT*RATLSP
Trigger: TGGGCTCAAAGTCGCCCTCCACGTGGGTGCACAGGA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 72 bp ATGCATGACTCCCAACCCCATCCCAAAGGAGTGGGGTaGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: MHDSQPHPKGVG*GDSVLCCPEPL
Trigger: CAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTTTGGGATGGGGTTGGGAGTCATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGGGGTCTGTTGGCCTTaGGCCCAGCCCCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLGVCWP*AQPQQC
Trigger: ACACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGCTCCCCCTCCTTGGTaGCGTGGGTCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLAPPPW*RGSAGA
Trigger: AGCTCCTGCAGACCCACGTCACCAAGGAGGGGGAGC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAAGGAGTGGGGTTGGGTaGCTCAGTGCTTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSARSGVG*LSALLS
Trigger: GGACAGCAAAGCACTGAGTCACCCAACCCCACTCCT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATCTGCAACTGGGGCTTaGGAATCTGGGCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASESATGA*ESGLLC
Trigger: GCACAGGAGCCCAGATTCTCAAGCCCCAGTTGCAGA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGAGAGATCTGGGGAACTaGCTCAGCAGGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLRDLGN*LSRGKP
Trigger: AGGCTTCCCCCTGCTGAGTCAGTTCCCCAGATCTCT...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398934.5
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGGGTCTGCAGGAGCTTaGCAGAGAGCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEGSAGA*QRAGTE
Trigger: TTCAGTGCCAGCTCTCTGGCAAGCTCCTGCAGACCC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTTGGTGACGTGGGTCTaGAGGAGCTTGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLLVTWV*RSLPES
Trigger: GCTCTCTGGCAAGCTCCTGCAGACCCACGTCACCAA...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATTGGTGACGTGGGTCTaGAGGAGCTTGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASELVTWV*RSLPES
Trigger: GCTCTCTGGCAAGCTCCTGCAGACCCACGTCACCAA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATTGGTGACGTGGGTCTaGAGGAGCTTGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSALVTWV*RSLPES
Trigger: GCTCTCTGGCAAGCTCCTGCAGACCCACGTCACCAA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAAGAGCCAGGGCCTGTaGAAGTGTGTGCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEKSQGL*KCVRVC
Trigger: GCACACACGCACACACTTGCACAGGCCCTGGCTCTT...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGTCTGGCAGACAGCGCTaGTGGATTCCACAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLSGRQR*WIPQWH
Trigger: ATGCCACTGTGGAATCCACCAGCGCTGTCTGCCAGA...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCACCAAAGGAGTGGGGTTaGGTGACTCAGTGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPPKEWG*VTQCFA
Trigger: AGCAAAGCACTGAGTCACCCAACCCCACTCCTTTGG...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGGGGTCTGTTGGCCTTaGGCCCAGCCCCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIGVCWP*AQPQQC
Trigger: ACACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGCCCACTCTTGGACATaGCGCGGGGTCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLAHSWT*RGVCWP
Trigger: AGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGCAGGGGGTATGATTTaGAATGGGCTCACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEAGGMI*NGLTGF
Trigger: GAACCCGGTGAGCCCATTTCAAATCATACCCCCTGC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACCAGAGAGCTGGCACTaGATCAAGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAPESWH*IKRLFL
Trigger: GAGGAAGAGCCTCTTGATTCAGTGCCAGCTCTCTGG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGCTCCCCCTCCTTGGTaGCGTGGGTCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQAPPPW*RGSAGA
Trigger: AGCTCCTGCAGACCCACGTCACCAAGGAGGGGGAGC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGCTCCCCCTCCTTGGTaGCGTGGGTCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIAPPPW*RGSAGA
Trigger: AGCTCCTGCAGACCCACGTCACCAAGGAGGGGGAGC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAATGTCATGGGCAGAATaGGGAAGGGGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEMSWAE*GRGSQR
Trigger: CCTCTGAGAGCCCCTTCCTCATTCTGCCCATGACAT...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGAGGCCAGGTCTGGATaGCACAGGGATACGGGACCC +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLEARSG*HRDTGP
Trigger: GGGTCCCGTATCCCTGTGGCATCCAGACCTGGCCTC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGCACGCTGCTCCACACTaGACACAGGAGTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLHAAPH*TQECQR
Trigger: TCTTTGACACTCCTGTGTGCAGTGTGGAGCAGCGTG...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATGGAGACTCAGACAGTaGACGCTGCTCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEWRLRQ*TLLHTA
Trigger: TGCAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCCCCTTCACCCACCTaGCTACCATGGGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSASPSPT*LPWDSA
Trigger: AGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATCCCCTTCACCCACCTaGCTACCATGGGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASESPSPT*LPWDSA
Trigger: AGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGGCTCTGGAAACACTaGTCACTCACTCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASERLWKH*SLTPQV
Trigger: GACCTGCGGAGTGAGTGACCAGTGTTTCCAGAGCCT...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR CCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAACCCGCTTTTTGGGTCTaGCGATTTTGGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEPAFWV*RFWPGR
Trigger: CCTTCCTGGCCAAAATCGCCAGACCCAAAAAGCGGG...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACCCACCTGGCTACCATaGGATTCTGCTACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAPTWLP*DSATAL
Trigger: CAAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398934.5
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGCCCTTCCTGAGCAGCTaGGTGCCCTCTCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLPFLSS*VPSQPT
Trigger: TGTGGGCTGAGAGGGCACCCAGCTGCTCAGGAAGGG...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR CCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAACCCACCTGGCTACCATaGGATTCTGCTACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEPTWLP*DSATAS
Trigger: TGAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGG...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613499.4
CDS-3UTR TCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCACTCATATTGGCTACCTaGATCACCAAGCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPLILAT*ITKHSF
Trigger: GAAGCTGTGCTTGGTGATTCAGGTAGCCAATATGAG...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGCTCCCCCTCCTTGGTaGCGTGGGTCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGAPPPW*RGSAGA
Trigger: AGCTCCTGCAGACCCACGTCACCAAGGAGGGGGAGC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCATGGCCACATTCTGCTTaGGTGAATGCGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPWPHSA*VNAQIC
Trigger: ACAGATTTGCGCATTCACTCAAGCAGAATGTGGCCA...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGCAGATCACGAGGTCATaGGATCGAGACCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLQITRS*DRDHPG
Trigger: ACCAGGATGGTCTCGATCTCATGACCTCGTGATCTG...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCAAGGACAGAGCCCTTaGGCCACGAGGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIQGQSP*ATRASG
Trigger: GCCAGAAGCCCTCGTGGCTCAAGGGCTCTGTCCTTG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398932.5
CDS-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGGCAAAGACTGAAGAGTaGAGACTCCTGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLAKTEE*RLLAGW
Trigger: CCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGC...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCATGTCAATTCTCACGTTaGTGTGCCCACTCTTGGACA +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPCQFSR*CAHSWT
Trigger: TGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACA...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGAGGCCAGGTCTGGATaGCACAGGGATACGGGACCC +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQEARSG*HRDTGP
Trigger: GGGTCCCGTATCCCTGTGGCATCCAGACCTGGCCTC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGAATCTGGGCTCCTGTaGACCCACGTGGAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIESGLL*THVEGD
Trigger: GTCGCCCTCCACGTGGGTGCACAGGAGCCCAGATTC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAACCTTCCTCTCCTGGCTaGTACGTAACACTTCGTGTC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEPSSPG*YVTLRV
Trigger: GACACGAAGTGTTACGTAGCAGCCAGGAGAGGAAGG...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGTCCCACCGCCCAGCTaGCCTCATCCGTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGVPPPS*PHPCPR
Trigger: CCTTGGACACGGATGAGGGCAGCTGGGCGGTGGGAC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398932.5
CDS-3UTR CCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATCTCAGCCCGCTTTTTaGGTCTGGCGATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASESQPAF*VWRFWP
Trigger: TGGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTCTCAGCCCGCTTTTTaGGTCTGGCGATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLSQPAF*VWRFWP
Trigger: TGGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGA...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGCCCTCCTTGGTGACGTaGGTCTGCAGGAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLPSLVT*VCRSLP
Trigger: TGGCAAGCTCCTGCAGACCCACGTCACCAAGGAGGG...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCCCTCCTTGGTGACGTaGGTCTGCAGGAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHPSLVT*VCRSLP
Trigger: TGGCAAGCTCCTGCAGACCCACGTCACCAAGGAGGG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGAGGGTTAAACCTGGATaGCGCCCCTGTGATCAGACA +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLRVKPG*RPCDQT
Trigger: TGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCT...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCCCTTCCTGAGCAGCTaGGTGCCCTCTCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIPFLSS*VPSQPT
Trigger: TGTGGGCTGAGAGGGCACCCAGCTGCTCAGGAAGGG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGGGGTCTGTTGGCCTTaGGCCCAGCCCCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIGVCWP*AQPQQC
Trigger: ACACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGCCCACTCTTGGACATaGCGCGGGGTCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGAHSWT*RGVCWP
Trigger: AGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGGAGGACATTCCTCTGTaGTGGAACGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAEDIPL*WNGLHS
Trigger: GCTATGGAGTCCGTTCCATCACAGAGGAATGTCCTC...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGGCTCCCCCTCCTTGGTaGCGTGGGTCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMAPPPW*RGSAGA
Trigger: AGCTCCTGCAGACCCACGTCACCAAGGAGGGGGAGC...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCATGTCCGTGCAGTTTTTaGGAGTGCGTCTACACATTT +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPCPCSF*ECVYTF
Trigger: AAATGTGTAGACGCACTCTCAAAAACTGCACGGACA...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTACCATGATTATGCTTaGAGAGCCAGGGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLYHDYA*RARACA
Trigger: TGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTA...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGCTTGTGGGGCACACTaGTTTACTGCTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEACGAH*FTAVDS
Trigger: AGAGTCAACAGCAGTAAATCAGTGTGCCCCACAAGC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCGTGGAGGGCGACTTTaGGCCCATCCTTCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQRGGRL*AHPSRV
Trigger: CACCCTAGAAGGATGGGCTCAAAGTCGCCCTCCACG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCATATCCACAGTTAGTGTaGGATTTCCGACATGCACCA +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPYPQLV*DFRHAP
Trigger: TGGTGCATGTCGGAAATCTCACACTAACTGTGGATA...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGTGAATGGCATCCATTaGCAGGCTCTGGAAACACTG +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEVNGIH*QALETL
Trigger: CAGTGTTTCCAGAGCCTGGCAATGGATGCCATTCAC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGATTCTCACGTTGCTGTaGCCACTCTTGGACATGACG +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLILTLL*PLLDMT
Trigger: CGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAAT...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAATTCTCACGTTGCTGTaGCCACTCTTGGACATGACG +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAILTLL*PLLDMT
Trigger: CGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAAT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGCACAGCTTCCCATTCTaGTTGGTGATGACTGCACAG +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLHSFPF*LVMTAQ
Trigger: CTGTGCAGTCATCACCAAGCAGAATGGGAAGCTGTG...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAACACAGCTTCCCATTCTaGTTGGTGATGACTGCACAG +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEHSFPF*LVMTAQ
Trigger: CTGTGCAGTCATCACCAAGCAGAATGGGAAGCTGTG...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTTGGTGACGTGGGTCTaGAGGAGCTTGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHLVTWV*RSLPES
Trigger: GCTCTCTGGCAAGCTCCTGCAGACCCACGTCACCAA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGAAGAGCCAGGGCCTGTaGAAGTGTGTGCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLKSQGL*KCVRVC
Trigger: GCACACACGCACACACTTGCACAGGCCCTGGCTCTT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGACTGCCTGCAAAGACTaGAGAGTGCAGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLTACKD*RVQTPG
Trigger: GCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGCAGT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGCCCACTCTTGGACATaGCGCGGGGTCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIAHSWT*RGVCWP
Trigger: AGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCGCCCACTCTTGGACATaGCGCGGGGTCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGAHSWT*RGVCWP
Trigger: AGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGC...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAACGATGGCATAGTAGATaGCTCCAAAAAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASERWHSR*LQKGTR
Trigger: CCTGGTTCCTTTTTGGAGTCATCTACTATGCCATCG...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAGAGAGTCCACTTTCATaGTGCAGGGGGTATGATTTG +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAESPLS*CRGYDL
Trigger: CAAATCATACCCCCTGCATCATGAAAGTGGACTCTC...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAACAGGAAGATGGCATaGGGACATTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASENRKMA*GHSSVM
Trigger: CATCACAGAGGAATGTCCTCATGCCATCTTCCTGTT...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACTCATATTGGCTACCTaGATCACCAAGCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSALILAT*ITKHSF
Trigger: GAAGCTGTGCTTGGTGATTCAGGTAGCCAATATGAG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAACTCATATTGGCTACCTaGATCACCAAGCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASELILAT*ITKHSF
Trigger: GAAGCTGTGCTTGGTGATTCAGGTAGCCAATATGAG...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCCAGAGAGCTGGCACTaGATCAAGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHPESWH*IKRLFL
Trigger: GAGGAAGAGCCTCTTGATTCAGTGCCAGCTCTCTGG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTAGGGCACTAGACCCCTaGATTTGGCCCGGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIRALDP*IWPGAK
Trigger: TTTTGCCCCGGGCCAAATTCAGGGGTCTAGTGCCCT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCATGTCTGGTCATTGTATaGTTGGGTTCAGTGATGACA +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPCLVIV*LGSVMT
Trigger: TGTCATCACTGAACCCAATCATACAATGACCAGACA...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGGGCCCAATCTCAGCTaGAGATCCCAGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQGPNLS*RSQRSG
Trigger: CCCAGATCTCTGGGATCTTCAGCTGAGATTGGGCCC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398934.5
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATATTCTGCTACTGCCTTaGGTCCAGGTGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDILLLP*VQVLGP
Trigger: GGGCCCCAGCACCTGGACTCAAGGCAGTAGCAGAAT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398934.5
CDS-3UTR GCA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGGCTACCATGGGATTCTaGTACTGCCTGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAATMGF*YCLQRL
Trigger: CAGTCTTTGCAGGCAGTAGCAGAATCCCATGGTAGC...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTGTCAATTCTCACGTTaGTGTGCCCACTCTTGGACA +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLCQFSR*CAHSWT
Trigger: TGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACA...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGGGTCTGCAGGAGCTTaGCAGAGAGCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIGSAGA*QRAGTE
Trigger: TTCAGTGCCAGCTCTCTGGCAAGCTCCTGCAGACCC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTGGTGACGTGGGTCTaGAGGAGCTTGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAILVTWV*RSLPES
Trigger: GCTCTCTGGCAAGCTCCTGCAGACCCACGTCACCAA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCACTGCACAGTAAAATGTaGAATCTGGGCTTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPLHSKM*NLGFSE
Trigger: TTCGGAAAAGCCCAGATTGCACATTTTACTGTGCAG...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCGAGGCCAGGTCTGGATaGCACAGGGATACGGGACCC +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGEARSG*HRDTGP
Trigger: GGGTCCCGTATCCCTGTGGCATCCAGACCTGGCCTC...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGTTGGTAAGTACACACTaGCAGGAGTTACAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLLVSTH*QELQAV
Trigger: CACTGCTTGTAACTCCTGGCAGTGTGTACTTACCAA...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTGTACAACCCACACCTaGAGGCTACGTGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLCTTHT*RLRAPV
Trigger: CACAGGAGCACGTAGCCTGCAGGTGTGGGTTGTACA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398932.5
ENST00000398934.5
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCCCACCTGGCTACCATaGGATTCTGCTACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQPTWLP*DSATAC
Trigger: GCAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLSPSPT*LPWDSA
Trigger: AGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGGCTCTTCCTCATATTaGCTACCTGAATCACCAAGC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEGSSSY*LPESPS
Trigger: GCTTGGTGATTCAGGTAGCCAATATGAGGAAGAGCC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATTCTCCTTTAGGTTTTaGGGTGTGAGGTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAFSFRF*GVRSLR
Trigger: CCTGAGAGACCTCACACCCCAAAACCTAAAGGAGAA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTTCTCCTTTAGGTTTTaGGGTGTGAGGTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLFSFRF*GVRSLR
Trigger: CCTGAGAGACCTCACACCCCAAAACCTAAAGGAGAA...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTCTGGCAGACAGCGCTaGTGGATTCCACAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHSGRQR*WIPQWH
Trigger: ATGCCACTGTGGAATCCACCAGCGCTGTCTGCCAGA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCCCACCTGGCTACCATaGGATTCTGCTACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIPTWLP*DSATAP
Trigger: AGGGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTACTGCCTGCAAAGACTaGAGAGTGCAGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAITACKD*RVQTPG
Trigger: GCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGCAGT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCTGGACATGCCGATGTaGATGGCATCCATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQLDMPM*MASIAR
Trigger: CCTGGCAATGGATGCCATTCACATCGGCATGTCCAG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGCCCACTCTTGGACATaGCGCGGGGTCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRAHSWT*RGVCWP
Trigger: AGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGCAGGGGGTATGATTTaGAATGGGCTCACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIAGGMI*NGLTGF
Trigger: GAACCCGGTGAGCCCATTTCAAATCATACCCCCTGC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGCAGGGGGTATGATTTaGAATGGGCTCACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQAGGMI*NGLTGF
Trigger: GAACCCGGTGAGCCCATTTCAAATCATACCCCCTGC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGAGGACATTCCTCTGTaGTGGAACGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLEDIPL*WNGLHS
Trigger: GCTATGGAGTCCGTTCCATCACAGAGGAATGTCCTC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCCAGAGAGCTGGCACTaGATCAAGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQPESWH*IKRLFL
Trigger: GAGGAAGAGCCTCTTGATTCAGTGCCAGCTCTCTGG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTATGTCATGGGCAGAATaGGGAAGGGGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIMSWAE*GRGSQR
Trigger: CCTCTGAGAGCCCCTTCCTCATTCTGCCCATGACAT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTGGATGGCGCCCCTGTaGTCAGACATTGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQWMAPL*SDIALL
Trigger: CAACAGAGCAATGTCTGATCACAGGGGCGCCATCCA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAAGGGCACTAGACCCCTaGATTTGGCCCGGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGRALDP*IWPGAK
Trigger: TTTTGCCCCGGGCCAAATTCAGGGGTCTAGTGCCCT...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGCACATTCTGCTTGAGTaGATGCGCAAATCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLHILLE*MRKSVF
Trigger: AAAGACAGATTTGCGCATTCACTCAAGCAGAATGTG...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCCCATCCTTCTAGGGTaGTGCCCCAGGGAAGACCAT +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDPILLG*CPREDH
Trigger: ATGGTCTTCCCTGGGGCATCACCCTAGAAGGATGGG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCTGCAACTGGGGCTTaGGAATCTGGGCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGSATGA*ESGLLC
Trigger: GCACAGGAGCCCAGATTCTCAAGCCCCAGTTGCAGA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATGCTCCTGTGCTGGCTaGGCCGGTAGGCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRCSCAG*AGRQEH
Trigger: GTGTTCCTGCCTACCGGCTCAGCCAGCACAGGAGCA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398932.5
CDS-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGCAGGGGATAATCCTATaGAGTTCCTTTATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLQGIIL*SSFMGK
Trigger: CTTGCCCATAAAGGAACTGCATAGGATTATCCCCTG...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGTTCATGGCCACATTCTaGTTGAGTGAATGCGCAAAT +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLFMATF*LSECAN
Trigger: ATTTGCGCATTCACTCAAGCAGAATGTGGCCATGAA...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATGGTGACTCAGTGCTTTaGTGTCCAGAGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHGDSVL*CPEPLS
Trigger: AGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACC...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTGGATCCAAGTCGGCTaGTATCCTTCCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQWIQVG*YPSSPG
Trigger: GCCAGGAGAGGAAGGATAGCAGCCGACTTGGATCCA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTAGGCTCTGGAAACACTaGTCACTCACTCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIRLWKH*SLTPQV
Trigger: GACCTGCGGAGTGAGTGACCAGTGTTTCCAGAGCCT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR CCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGGGGTATGATTTGAAATaGGCTCACCGGGTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLGYDLK*AHRVLS
Trigger: ACTTAGAACCCGGTGAGCCCATTTCAAATCATACCC...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCCCGCTTTTTGGGTCTaGCGATTTTGGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQPAFWV*RFWPGR
Trigger: CCTTCCTGGCCAAAATCGCCAGACCCAAAAAGCGGG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCCCGCTTTTTGGGTCTaGCGATTTTGGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIPAFWV*RFWPGR
Trigger: CCTTCCTGGCCAAAATCGCCAGACCCAAAAAGCGGG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTCTCAGCCCGCTTTTTaGGTCTGGCGATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLSQPAF*VWRFWP
Trigger: TGGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGCCCTCCTTGGTGACGTaGGTCTGCAGGAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMPSLVT*VCRSLP
Trigger: TGGCAAGCTCCTGCAGACCCACGTCACCAAGGAGGG...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCCCTCCTTGGTGACGTaGGTCTGCAGGAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGPSLVT*VCRSLP
Trigger: TGGCAAGCTCCTGCAGACCCACGTCACCAAGGAGGG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGAGGAGGAGTCCACGTaGAATTTGACAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLEEEST*NLTVAW
Trigger: CCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGCCAGTAGATTTCCTCTaGGATATAAGATGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLPVDFL*DIRCSA
Trigger: AGCCGAACATCTTATATCCCAGAGGAAATCTACTGG...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGAGGGTTAAACCTGGATaGCGCCCCTGTGATCAGACA +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLRVKPG*RPCDQT
Trigger: TGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGCACTCTAGCAGCCTaGGCGACAGAGCGAGACCCA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGCTLAA*ATERDP
Trigger: TGGGTCTCGCTCTGTCGCCCAGGCTGCTAGAGTGCA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATGGAGTCCGTCCTTCTaGAATGGAGATTCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEWSPSF*NGDSVY
Trigger: GTAAACAGAATCTCCATTCCAGAAGGACGGACTCCA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCACTATAAGAAGTGCTaGGCTCCCATGCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIHYKKC*APMLSP
Trigger: GGGGCTGAGCATGGGAGCCCAGCACTTCTTATAGTG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612702.4
CDS-3UTR TCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTGGGGTCTGTTGGCCTTaGGCCCAGCCCCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIGVCWP*AQPQQC
Trigger: ACACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCC...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTGGCAGCGAACAGGGTaGGTTTGTATCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLWQRTG*VCISTS
Trigger: TGAAGTGGAGATACAAACTCACCCTGTTCGCTGCCA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGCAGGGGGTATGATTTaGAATGGGCTCACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDAGGMI*NGLTGF
Trigger: GAACCCGGTGAGCCCATTTCAAATCATACCCCCTGC...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCCAGAGAGCTGGCACTaGATCAAGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDPESWH*IKRLFL
Trigger: GAGGAAGAGCCTCTTGATTCAGTGCCAGCTCTCTGG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAATGTCATGGGCAGAATaGGGAAGGGGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGMSWAE*GRGSQR
Trigger: CCTCTGAGAGCCCCTTCCTCATTCTGCCCATGACAT...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATATGTCATGGGCAGAATaGGGAAGGGGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDMSWAE*GRGSQR
Trigger: CCTCTGAGAGCCCCTTCCTCATTCTGCCCATGACAT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGATTCCACAGTGGCATTaGGGAGGACCACAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLIPQWH*GGPQAQ
Trigger: TTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAAT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATATTCCACAGTGGCATTaGGGAGGACCACAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHIPQWH*GGPQAQ
Trigger: TTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAAT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGGATGGCGCCCCTGTaGTCAGACATTGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGWMAPL*SDIALL
Trigger: CAACAGAGCAATGTCTGATCACAGGGGCGCCATCCA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGCTCTCGTTCATGGATTaGGGGCATTCTTTAAACTTT +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLLSFMD*GHSLNF
Trigger: AAAGTTTAAAGAATGCCCTCAATCCATGAACGAGAG...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGCTGATTTACTGCTGTTaGCTCTGGTTTCTCAAATGG +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLLIYCC*LWFLKW
Trigger: CCATTTGAGAAACCAGAGTCAACAGCAGTAAATCAG...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGGTAATTTCCCCAGGATaGAAAAGGGAGCCAATGCAT +
Preference number: 4 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAVISPG*KREPMH
Trigger: ATGCATTGGCTCCCTTTTTCATCCTGGGGAAATTAC...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAATGTGGTCAAATGTCTaGCATTTTGAACATCATGAC +
Preference number: 4 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPMWSNV*HFEHHD
Trigger: GTCATGATGTTCAAAATGTCAGACATTTGACCACAT...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGTGGAAATTGAACAATaGGAACACATGGACACAGGA +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEVEIEQ*EHMDTG
Trigger: TCCTGTGTCCATGTGTTCTCATTGTTCAATTTCCAC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCAGCTACTCGGGAGGCTaGGGGAGAGAATGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGSYSGG*GREWRE
Trigger: TTCACGCCATTCTCTCCCTCAGCCTCCCGAGTAGCT...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCAGAGATCTGGGGAACTaGCTCAGCAGGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIRDLGN*LSRGKP
Trigger: AGGCTTCCCCCTGCTGAGTCAGTTCCCCAGATCTCT...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
CDS-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATGTTATCTGCAAAGACTaGAGAGTGCAGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHVICKD*RVQTPG
Trigger: GCCAGGAGTCTGCACTCTTCAGTCTTTGCAGATAAC...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613499.4
CDS-3UTR GCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGCAAAGACTGAAGAGTaGAGACTCCTGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQAKTEE*RLLAGW
Trigger: CCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGATTCTCACGTTGCTGTaGCCACTCTTGGACATGACG +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLILTLL*PLLDMT
Trigger: CGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAAT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCGGGTCTGCAGGAGCTTaGCAGAGAGCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGGSAGA*QRAGTE
Trigger: TTCAGTGCCAGCTCTCTGGCAAGCTCCTGCAGACCC...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTTGGTGACGTGGGTCTaGAGGAGCTTGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRILVTWV*RSLPES
Trigger: GCTCTCTGGCAAGCTCCTGCAGACCCACGTCACCAA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACTGCACAGTAAAATGTaGAATCTGGGCTTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSALHSKM*NLGFSE
Trigger: TTCGGAAAAGCCCAGATTGCACATTTTACTGTGCAG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATACTTCTCCTCGAGTTaGTGTTTCTCAGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAYFSSS*CFSESA
Trigger: TGCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGACGGCTTCAGAAAGTTaGTTTGAGAACACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCATASES*FENTVQ
Trigger: CTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGT...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGAGACTAGATTTCGAGTaGACACCACAAAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLRLDFE*TPQNLE
Trigger: TTCCAAGTTTTGTGGTGTGCACTCGAAATCTAGTCT...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCTGCACATACAGAGTaGCTGGCAGCCCTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGSAHTE*LAALAL
Trigger: GAGAGCTAGGGCTGCCAGGCACTCTGTATGTGCAGA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGCCTTGAGTCCAGGTaGTGGGGCCCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGCLESR*WGPISA
Trigger: AGCTGAGATTGGGCCCCAGCACCTGGACTCAAGGCA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398934.5
CDS-3UTR GCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATATGGGATTCTGCTACTaGCCCTTCCTGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDMGFCY*PFLSSW
Trigger: CCAGCTGCTCAGGAAGGGGCAGTAGCAGAATCCCAT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR CCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDSPSPT*LPWDSA
Trigger: AGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGA...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAAGGCTCTGGAAACACTaGTCACTCACTCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGRLWKH*SLTPQV
Trigger: GACCTGCGGAGTGAGTGACCAGTGTTTCCAGAGCCT...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTCCATTGCCAGGCTCTaGAAACACTGGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHSIARL*KHWSLT
Trigger: AGTGAGTGACCAGTGTTTCCAGAGCCTGGCAATGGA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTCTCAGCCCGCTTTTTaGGTCTGGCGATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQSQPAF*VWRFWP
Trigger: TGGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATTCTGGCAGACAGCGCTaGTGGATTCCACAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDSGRQR*WIPQWH
Trigger: ATGCCACTGTGGAATCCACCAGCGCTGTCTGCCAGA...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGAGGGTTAAACCTGGATaGCGCCCCTGTGATCAGACA +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQRVKPG*RPCDQT
Trigger: TGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCT...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTTGCACTCTAGCAGCCTaGGCGACAGAGCGAGACCCA +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLICTLAA*ATERDP
Trigger: TGGGTCTCGCTCTGTCGCCCAGGCTGCTAGAGTGCA...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAGCAGCCCTAGCTCTCTaGCATTATATTCAGATTACA +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAAALAL*HYIQIT
Trigger: TGTAATCTGAATATAATGCCAGAGAGCTAGGGCTGC...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCTATCCTTCCTCTCCTaGCTGCTACGTAACACTTCG +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHLSFLS*LLRNTS
Trigger: CGAAGTGTTACGTAGCAGCCAGGAGAGGAAGGATAG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCCCACCTGGCTACCATaGGATTCTGCTACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGPTWLP*DSATAP
Trigger: AGGGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR TCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATGCCCACTCTTGGACATaGCGCGGGGTCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDAHSWT*RGVCWP
Trigger: AGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGC...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCGATGGCATAGTAGATaGCTCCAAAAAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHRWHSR*LQKGTR
Trigger: CCTGGTTCCTTTTTGGAGTCATCTACTATGCCATCG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTGCAGGGGGTATGATTTaGAATGGGCTCACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVAGGMI*NGLTGF
Trigger: GAACCCGGTGAGCCCATTTCAAATCATACCCCCTGC...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGCAGGGGGTATGATTTaGAATGGGCTCACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIAGGMI*NGLTGF
Trigger: GAACCCGGTGAGCCCATTTCAAATCATACCCCCTGC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGAGAGTCCACTTTCATaGTGCAGGGGGTATGATTTG +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLESPLS*CRGYDL
Trigger: CAAATCATACCCCCTGCATCATGAAAGTGGACTCTC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGAGGACATTCCTCTGTaGTGGAACGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGEDIPL*WNGLHS
Trigger: GCTATGGAGTCCGTTCCATCACAGAGGAATGTCCTC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGAACAGGAAGATGGCATaGGGACATTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLNRKMA*GHSSVM
Trigger: CATCACAGAGGAATGTCCTCATGCCATCTTCCTGTT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCCAGAGAGCTGGCACTaGATCAAGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGPESWH*IKRLFL
Trigger: GAGGAAGAGCCTCTTGATTCAGTGCCAGCTCTCTGG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCATGTCATGGGCAGAATaGGGAAGGGGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGMSWAE*GRGSQR
Trigger: CCTCTGAGAGCCCCTTCCTCATTCTGCCCATGACAT...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTGGATGGCGCCCCTGTaGTCAGACATTGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIWMAPL*SDIALL
Trigger: CAACAGAGCAATGTCTGATCACAGGGGCGCCATCCA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAATCAGCAAGCATGACTaGGACAACAATTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEISKHD*DNNYSQ
Trigger: TTGAGAGTAATTGTTGTCTCAGTCATGCTTGCTGAT...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAGAGTCATCTTGTTTATaGGTTTCTTACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAESSCL*VSYLQL
Trigger: GAGCTGAAGGTAAGAAACTCATAAACAAGATGACTC...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGGCACTATTTTATTGCTaGATAAGACGTGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAALFYC*IRRGLW
Trigger: CCACAAGCCACGTCTTATTCAGCAATAAAATAGTGC...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACAGATCACGAGGTCATaGGATCGAGACCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGQITRS*DRDHPG
Trigger: ACCAGGATGGTCTCGATCTCATGACCTCGTGATCTG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGATAGTAGCTCAGCCTTaGGAAACACAAACCACCATT +
Preference number: 4 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAIVAQP*ETQTTI
Trigger: AATGGTGGTTTGTGTTTCTCAAGGCTGAGCTACTAT...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTCAGTCCAGACAGGTTaGCTTGGGAAAGATAGGTGT +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHSVQTG*LGKDRC
Trigger: ACACCTATCTTTCCCAAGGCAACCTGTCTGGACTGA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGCAAAGACTGAAGAGTaGAGACTCCTGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGAKTEE*RLLAGW
Trigger: CCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTGTCAATTCTCACGTTaGTGTGCCCACTCTTGGACA +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLCQFSR*CAHSWT
Trigger: TGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTGAGGCCAGGTCTGGATaGCACAGGGATACGGGACCC +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIEARSG*HRDTGP
Trigger: GGGTCCCGTATCCCTGTGGCATCCAGACCTGGCCTC...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATCAAGAGCTTTATTTTaGTCTTGGAATGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASESRALF*SWNVRG
Trigger: TCCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGTTCTGCTTGAGTGAATaGGCAAATCTGTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLFCLSE*ANLSLF
Trigger: AAACAAAGACAGATTTGCGCATTCACTCAAGCAGAA...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTTGGAGACTCAGACAGTaGACGCTGCTCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVWRLRQ*TLLHTA
Trigger: TGCAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCA...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCCTTCCTCTCCTGGCTaGTACGTAACACTTCGTGTC +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDPSSPG*YVTLRV
Trigger: GACACGAAGTGTTACGTAGCAGCCAGGAGAGGAAGG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGATCCAAGTCGGCTaGTATCCTTCCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGWIQVG*YPSSPG
Trigger: GCCAGGAGAGGAAGGATAGCAGCCGACTTGGATCCA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCATGGGATTCTGCTACTaGCCCTTCCTGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGMGFCY*PFLSSW
Trigger: CCAGCTGCTCAGGAAGGGGCAGTAGCAGAATCCCAT...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR GCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAACCCCAGGGAACGCTCTaGTCCATGTTAACAGCCGGG +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKPQGTL*SMLTAG
Trigger: CCCGGCTGTTAACATGGAGCAGAGCGTTCCCTGGGG...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612702.4
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGTGCAGACTCCTGGCTaGATGGGAAGTTATGTCAAG +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQVQTPG*MGSYVK
Trigger: CTTGACATAACTTCCCATCCAGCCAGGAGTCTGCAC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGSPSPT*LPWDSA
Trigger: AGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGAGGCTCTGGAAACACTaGTCACTCACTCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMRLWKH*SLTPQV
Trigger: GACCTGCGGAGTGAGTGACCAGTGTTTCCAGAGCCT...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTCCATTGCCAGGCTCTaGAAACACTGGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQSIARL*KHWSLT
Trigger: AGTGAGTGACCAGTGTTTCCAGAGCCTGGCAATGGA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATGGCTCTTCCTCATATTaGCTACCTGAATCACCAAGC +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHGSSSY*LPESPS
Trigger: GCTTGGTGATTCAGGTAGCCAATATGAGGAAGAGCC...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATCCCTCCTTGGTGACGTaGGTCTGCAGGAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDPSLVT*VCRSLP
Trigger: TGGCAAGCTCCTGCAGACCCACGTCACCAAGGAGGG...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAACCCTCCTTGGTGACGTaGGTCTGCAGGAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKPSLVT*VCRSLP
Trigger: TGGCAAGCTCCTGCAGACCCACGTCACCAAGGAGGG...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATAATTTGACAGTGGCTTaGTTGAGGAGAATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHNLTVA*LRRIRS
Trigger: GGAGCGGATTCTCCTCAACCAAGCCACTGTCAAATT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGAGGAGGAGTCCACGTaGAATTTGACAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDEEEST*NLTVAW
Trigger: CCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTC...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTCTGGCAGACAGCGCTaGTGGATTCCACAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGSGRQR*WIPQWH
Trigger: ATGCCACTGTGGAATCCACCAGCGCTGTCTGCCAGA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGCATATTTTCCATTTTTaGAGAGAGATACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLHIFHF*REIPQA
Trigger: TGCCTGTGGTATCTCTCTCCAAAAATGGAAAATATG...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAAGGGTTAAACCTGGATaGCGCCCCTGTGATCAGACA +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGRVKPG*RPCDQT
Trigger: TGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCT...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTGGCTCCTCCTTAGTTaGGTGTTGAGTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLWLLLS*VLSVNL
Trigger: CAGATTCACACTCAACACCCAACTAAGGAGGAGCCA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAAGGAGTGTCAAAGACTaGGTTCCCCGTGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGRSVKD*VPRVQL
Trigger: CAGCTGAACACGGGGAACCCAGTCTTTGACACTCCT...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAAAGTACTACATCATGTaGCAAGGGTTGCTAACCAAA +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAKYYIM*QGLLTK
Trigger: TTTGGTTAGCAACCCTTGCCACATGATGTAGTACTT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTTTCCCCCACATTCCTaGTCACTCACTCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIFPPHS*SLTPQV
Trigger: GACCTGCGGAGTGAGTGACCAGGAATGTGGGGGAAA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612702.4
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGACTGGACATGCCGATGTaGATGGCATCCATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRLDMPM*MASIAR
Trigger: CCTGGCAATGGATGCCATTCACATCGGCATGTCCAG...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGGCAGCGAACAGGGTaGGTTTGTATCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGWQRTG*VCISTS
Trigger: TGAAGTGGAGATACAAACTCACCCTGTTCGCTGCCA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGAGAGTCCACTTTCATaGTGCAGGGGGTATGATTTG +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIESPLS*CRGYDL
Trigger: CAAATCATACCCCCTGCATCATGAAAGTGGACTCTC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGAGAGTCCACTTTCATaGTGCAGGGGGTATGATTTG +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQESPLS*CRGYDL
Trigger: CAAATCATACCCCCTGCATCATGAAAGTGGACTCTC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTAACAGGAAGATGGCATaGGGACATTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAINRKMA*GHSSVM
Trigger: CATCACAGAGGAATGTCCTCATGCCATCTTCCTGTT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATATTCCACAGTGGCATTaGGGAGGACCACAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDIPQWH*GGPQAQ
Trigger: TTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAAT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTCTGTTCAAACTGACTaGAATCAGCCACATATTTTC +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLSVQTD*NQPHIF
Trigger: GAAAATATGTGGCTGATTTCAGTCAGTTTGAACAGA...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTTCAAACTGACTaGAATCAGCCACATATTTTC +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSASVQTD*NQPHIF
Trigger: GAAAATATGTGGCTGATTTCAGTCAGTTTGAACAGA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGGTTTCCACAGTTGTaGATTACAGATCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASERFPQL*ITDLIN
Trigger: ATTGATCAGATCTGTAATTCACAACTGTGGAAACCT...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGCTTGTGGGGCACACTaGTTTACTGCTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGACGAH*FTAVDS
Trigger: AGAGTCAACAGCAGTAAATCAGTGTGCCCCACAAGC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATAGAGATCTGGGGAACTaGCTCAGCAGGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDRDLGN*LSRGKP
Trigger: AGGCTTCCCCCTGCTGAGTCAGTTCCCCAGATCTCT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTCAGTCCAGACAGGTTaGCTTGGGAAAGATAGGTGT +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAISVQTG*LGKDRC
Trigger: ACACCTATCTTTCCCAAGGCAACCTGTCTGGACTGA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATATGGGATTCTGCTACTaGCTGCAAAGACTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHMGFCY*LQRLKS
Trigger: ACTCTTCAGTCTTTGCAGGCAGTAGCAGAATCCCAT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
CDS-3UTR GCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCACAGCTTCCCATTCTaGTTGGTGATGACTGCACAG +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDHSFPF*LVMTAQ
Trigger: CTGTGCAGTCATCACCAAGCAGAATGGGAAGCTGTG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAGGGTCTGCAGGAGCTTaGCAGAGAGCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKGSAGA*QRAGTE
Trigger: TTCAGTGCCAGCTCTCTGGCAAGCTCCTGCAGACCC...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGCCTGTGATCAGACATTaGTCTGTTGTAATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLPVIRH*SVVIKV
Trigger: CACTTTTATTACAACAGAGCAATGTCTGATCACAGG...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACCTGTGATCAGACATTaGTCTGTTGTAATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAPVIRH*SVVIKV
Trigger: CACTTTTATTACAACAGAGCAATGTCTGATCACAGG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATACGGCTTCAGAAAGTTaGTTTGAGAACACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHTASES*FENTVQ
Trigger: CTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGACGGCTTCAGAAAGTTaGTTTGAGAACACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLTASES*FENTVQ
Trigger: CTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATCTGCACATACAGAGTaGCTGGCAGCCCTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRSAHTE*LAALAL
Trigger: GAGAGCTAGGGCTGCCAGGCACTCTGTATGTGCAGA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTCACGCTGCTCCACACTaGACACAGGAGTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVHAAPH*TQECQR
Trigger: TCTTTGACACTCCTGTGTGCAGTGTGGAGCAGCGTG...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTTGGTAAGTACACACTaGCAGGAGTTACAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHLVSTH*QELQAV
Trigger: CACTGCTTGTAACTCCTGGCAGTGTGTACTTACCAA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGCACAAACCACCATTCTaGTGGAGCAAATCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLHKPPF*WSKSKL
Trigger: AAGCTTGGATTTGCTCCAGCAGAATGGTGGTTTGTG...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCATGGGATTCTGCTACTaGCTTGAGTCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGMGFCY*LESRCW
Trigger: CCAGCACCTGGACTCAAGGCAGTAGCAGAATCCCAT...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398934.5
CDS-3UTR GCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAGTCCTTGAGTCCAGGTaGTGGGGCCCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKVLESR*WGPISA
Trigger: AGCTGAGATTGGGCCCCAGCACCTGGACTCAAGGAC...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR GCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATGTCCTTGAGTCCAGGTaGTGGGGCCCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDVLESR*WGPISA
Trigger: AGCTGAGATTGGGCCCCAGCACCTGGACTCAAGGAC...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGTGAATGGCATCCATTaGCAGGCTCTGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIVNGIH*QALVTH
Trigger: GTGAGTGACCAGAGCCTGGCAATGGATGCCATTCAC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398932.5
CDS-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATCCCACCTGGCTACCATaGGATTCTGCTACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDPTWLP*DSATAC
Trigger: GCAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGG...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATCCCCTTCACCCACCTaGCTACCATGGGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRSPSPT*LPWDSA
Trigger: AGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAAGGCTCTGGAAACACTaGTCACTCACTCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRRLWKH*SLTPQV
Trigger: GACCTGCGGAGTGAGTGACCAGTGTTTCCAGAGCCT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCAACCAACAGGAAGATaGCATGAGGACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQQPTGR*HEDIPL
Trigger: CAGAGGAATGTCCTCATGCCATCTTCCTGTTGGTTG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCAACCAACAGGAAGATaGCATGAGGACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIQPTGR*HEDIPL
Trigger: CAGAGGAATGTCCTCATGCCATCTTCCTGTTGGTTG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTCCCGCTTTTTGGGTCTaGCGATTTTGGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIPAFWV*RFWPGR
Trigger: CCTTCCTGGCCAAAATCGCCAGACCCAAAAAGCGGG...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTCTCAGCCCGCTTTTTaGGTCTGGCGATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGSQPAF*VWRFWP
Trigger: TGGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGCATATTTTCCATTTTTaGAGAGAGATACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLHIFHF*REIPQA
Trigger: TGCCTGTGGTATCTCTCTCCAAAAATGGAAAATATG...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGAGGGTTAAACCTGGATaGCGCCCCTGTGATCAGACA +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMRVKPG*RPCDQT
Trigger: TGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCT...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGATAAGACGTGGCTTGTaGGGCACACTGATTTACTGC +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQIRRGL*GTLIYC
Trigger: GCAGTAAATCAGTGTGCCCCACAAGCCACGTCTTAT...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGCCAAAGGAGTGGGGTTaGGTGACTCAGTGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMPKEWG*VTQCFA
Trigger: AGCAAAGCACTGAGTCACCCAACCCCACTCCTTTGG...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGATAATTCCTCAAAAATaGATCCAAGTCGGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLIIPQK*IQVGCY
Trigger: ATAGCAGCCGACTTGGATCCATTTTTGAGGAATTAT...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGAAGATCCCAGAGATCTaGGGAAGTGATGAAGAGATC +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLKIPEI*GSDEEI
Trigger: GATCTCTTCATCACTTCCCCAGATCTCTGGGATCTT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATAAGATCCCAGAGATCTaGGGAAGTGATGAAGAGATC +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHKIPEI*GSDEEI
Trigger: GATCTCTTCATCACTTCCCCAGATCTCTGGGATCTT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTCCATTGCCAGGCTCTaGAAACACTATAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLSIARL*KHYKKC
Trigger: GCACTTCTTATAGTGTTTCCAGAGCCTGGCAATGGA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612702.4
CDS-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATCCGATTCAGCAGGTTTaGGGTGCAGCCAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDPIQQV*GAARGS
Trigger: AGACCCTCTGGCTGCACCCCAAACCTGCTGAATCGG...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATACTGCCTGCAAAGACTaGAGAGTGCAGACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDTACKD*RVQTPG
Trigger: GCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGCAGT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACGATGGCATAGTAGATaGCTCCAAAAAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGRWHSR*LQKGTR
Trigger: CCTGGTTCCTTTTTGGAGTCATCTACTATGCCATCG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGAGGACATTCCTCTGTaGTGGAACGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHREDIPL*WNGLHS
Trigger: GCTATGGAGTCCGTTCCATCACAGAGGAATGTCCTC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACTCATATTGGCTACCTaGATCACCAAGCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGLILAT*ITKHSF
Trigger: GAAGCTGTGCTTGGTGATTCAGGTAGCCAATATGAG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATCCAGAGAGCTGGCACTaGATCAAGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDPESWH*IKRLFL
Trigger: GAGGAAGAGCCTCTTGATTCAGTGCCAGCTCTCTGG...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCATTCCACAGTGGCATTaGGGAGGACCACAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGIPQWH*GGPQAQ
Trigger: TTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAAT...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATTGGATGGCGCCCCTGTaGTCAGACATTGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDWMAPL*SDIALL
Trigger: CAACAGAGCAATGTCTGATCACAGGGGCGCCATCCA...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGGAGATCAATGAATACTaGACCACAATTCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAEINEY*TTIQLS
Trigger: TGAGAGTTGAATTGTGGTTCAGTATTCATTGATCTC...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTTCAGAAAGTTGCTTTaGGAACACTGTCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQFRKLL*EHCPEH
Trigger: GTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCCAATAATAATGAAATaGAGAGAGGCCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHPIIMK*REARSG
Trigger: TCCAGACCTGGCCTCTCTTCATTTCATTATTATTGG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTAGGGCACTAGACCCCTaGATTTGGCCCGGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIRALDP*IWPGAK
Trigger: TTTTGCCCCGGGCCAAATTCAGGGGTCTAGTGCCCT...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATAGGGCACTAGACCCCTaGATTTGGCCCGGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDRALDP*IWPGAK
Trigger: TTTTGCCCCGGGCCAAATTCAGGGGTCTAGTGCCCT...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCCAAAATTGAGAGCGTaGGAGTATTCACTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQPKLRA*EYSLCH
Trigger: ATGGCACAGTGAATACTCTCACGCTCTCAATTTTGG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGCTACTCGGGAGGCTaGGGGAGAGAATGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYSYSGG*GREWRE
Trigger: TTCACGCCATTCTCTCCCTCAGCCTCCCGAGTAGCT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCCCATCCTTCTAGGGTaGTGCCCCAGGGAAGACCAT +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYPILLG*CPREDH
Trigger: ATGGTCTTCCCTGGGGCATCACCCTAGAAGGATGGG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTGGGCCCAATCTCAGCTaGAGATCCCAGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIGPNLS*RSQRSG
Trigger: CCCAGATCTCTGGGATCTTCAGCTGAGATTGGGCCC...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
CDS-3UTR GCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTGCTACCATGGGATTCTaGTACTGCCTGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVATMGF*YCLQRL
Trigger: CAGTCTTTGCAGGCAGTAGCAGAATCCCATGGTAGC...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGTGAATGGCATCCATTaGCAGGCTCTGGAAACACTG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIVNGIH*QALETL
Trigger: CAGTGTTTCCAGAGCCTGGCAATGGATGCCATTCAC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCATTCTCACGTTGCTGTaGCCACTCTTGGACATGACG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIILTLL*PLLDMT
Trigger: CGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAAT...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGTCAATTCTCACGTTaGTGTGCCCACTCTTGGACA +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGCQFSR*CAHSWT
Trigger: TGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCCACAGCTTCCCATTCTaGTTGGTGATGACTGCACAG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIHSFPF*LVMTAQ
Trigger: CTGTGCAGTCATCACCAAGCAGAATGGGAAGCTGTG...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCACAGCTTCCCATTCTaGTTGGTGATGACTGCACAG +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGHSFPF*LVMTAQ
Trigger: CTGTGCAGTCATCACCAAGCAGAATGGGAAGCTGTG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATGGGTCTGCAGGAGCTTaGCAGAGAGCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDGSAGA*QRAGTE
Trigger: TTCAGTGCCAGCTCTCTGGCAAGCTCCTGCAGACCC...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCTGCACAGTAAAATGTaGAATCTGGGCTTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHLHSKM*NLGFSE
Trigger: TTCGGAAAAGCCCAGATTGCACATTTTACTGTGCAG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATATTTGTCAAGGACTTaGTGTCTTAACCTCAAATGT +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEYLSRT*CLNLKC
Trigger: ACATTTGAGGTTAAGACAGCAAGTCCTTGACAAATA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTGGTGACTCAGTGCTTTaGTGTCCAGAGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIGDSVL*CPEPLS
Trigger: AGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACC...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCGAAAAAGGGAGCCAATaGATGACTCCCAACCCCATC +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGEKGSQ*MTPNPI
Trigger: GATGGGGTTGGGAGTCATGCATTGGCTCCCTTTTTC...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAGCTACCATGGGATTCTaGTACTGCCCCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKATMGF*YCPFLS
Trigger: GCTCAGGAAGGGGCAGTAGCAGAATCCCATGGTAGC...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR GCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGTGAATGGCATCCATTaGCAGGCTCTGGAAACACTA +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGVNGIH*QALETL
Trigger: TAGTGTTTCCAGAGCCTGGCAATGGATGCCATTCAC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612702.4
CDS-3UTR GCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGCTCTCCAAACACCTGTaGAAAAGAAAACTGATGCCT +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLLSKHL*KRKLMP
Trigger: AGGCATCAGTTTTCTTTTGCACAGGTGTTTGGAGAG...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGGTGCAGACTCCTGGCTaGATGGGAAGTTATGTCAAG +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMVQTPG*MGSYVK
Trigger: CTTGACATAACTTCCCATCCAGCCAGGAGTCTGCAC...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCGTGCAGACTCCTGGCTaGATGGGAAGTTATGTCAAG +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGVQTPG*MGSYVK
Trigger: CTTGACATAACTTCCCATCCAGCCAGGAGTCTGCAC...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCCCACCTGGCTACCATaGGATTCTGCTACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYPTWLP*DSATAC
Trigger: GCAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
CDS-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDSPSPT*LPWDSA
Trigger: AGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGA...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTCCATTGCCAGGCTCTaGAAACACTGGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMSIARL*KHWSLT
Trigger: AGTGAGTGACCAGTGTTTCCAGAGCCTGGCAATGGA...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGGGTATGATTTGAAATaGGCTCACCGGGTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIGYDLK*AHRVLS
Trigger: ACTTAGAACCCGGTGAGCCCATTTCAAATCATACCC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATCTCAGCCCGCTTTTTaGGTCTGGCGATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRSQPAF*VWRFWP
Trigger: TGGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGGCTCTTCCTCATATTaGCTACCTGAATCACCAAGC +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDGSSSY*LPESPS
Trigger: GCTTGGTGATTCAGGTAGCCAATATGAGGAAGAGCC...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGGCTCTTCCTCATATTaGCTACCTGAATCACCAAGC +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGGSSSY*LPESPS
Trigger: GCTTGGTGATTCAGGTAGCCAATATGAGGAAGAGCC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTGAGGAGGAGTCCACGTaGAATTTGACAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIEEEST*NLTVAW
Trigger: CCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTC...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGAGGAGGAGTCCACGTaGAATTTGACAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHREEEST*NLTVAW
Trigger: CCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATTTCTCCTTTAGGTTTTaGGGTGTGAGGTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDFSFRF*GVRSLR
Trigger: CCTGAGAGACCTCACACCCCAAAACCTAAAGGAGAA...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCCAGTAGATTTCCTCTaGGATATAAGATGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHPVDFL*DIRCSA
Trigger: AGCCGAACATCTTATATCCCAGAGGAAATCTACTGG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACTGGGGCTTGAGAATCTaGGCTCCTGTGCACCCACGT +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYWGLRI*APVHPR
Trigger: ACGTGGGTGCACAGGAGCCCAGATTCTCAAGCCCCA...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGTAGGTGGGAAGGCATaGACACCAGATAAGATTTGG +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGVGGKA*TPDKIW
Trigger: CCAAATCTTATCTGGTGTCCATGCCTTCCCACCTAC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAAATCTACATGTCATTTaGGATTTCCATCACCATAAC +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSANLHVI*DFHHHN
Trigger: GTTATGGTGATGGAAATCCCAAATGACATGTAGATT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAAGGAGTTACAAGCAGTaGGATTGTTTGCATATAAAA +
Preference number: 4 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSARSYKQ*DCLHIK
Trigger: TTTTATATGCAAACAATCCCACTGCTTGTAACTCCT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAGTATTTAAAGCTGTCTaGTCATTGTATGATTGGGTT +
Preference number: 4 (lower is better)
Translates to: MPQGYGTHTESVFHTASEVFKAV*SLYDWV
Trigger: AACCCAATCATACAATGACCAGACAGCTTTAAATAC...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTCCATTGCCAGGCTCTaGTCACTCACTCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPISIARL*SLTPQV
Trigger: GACCTGCGGAGTGAGTGACCAGAGCCTGGCAATGGA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398932.5
3UTR CAA 72 bp CAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTaGAGAACACTGTCCAGAGCACAGCTTTCGAACTTT +
Preference number: 4 (lower is better)
Translates to: QSQFSTRLQKVA*RTLSRAQLSNF
Trigger: AAAGTTCGAAAGCTGTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATGGCAGCGAACAGGGTaGGTTTGTATCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRWQRTG*VCISTS
Trigger: TGAAGTGGAGATACAAACTCACCCTGTTCGCTGCCA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCCGATGGCATAGTAGATaGCTCCAAAAAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIRWHSR*LQKGTR
Trigger: CCTGGTTCCTTTTTGGAGTCATCTACTATGCCATCG...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCGATGGCATAGTAGATaGCTCCAAAAAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGRWHSR*LQKGTR
Trigger: CCTGGTTCCTTTTTGGAGTCATCTACTATGCCATCG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGCAGGGGGTATGATTTaGAATGGGCTCACCGGGTTC +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYAGGMI*NGLTGF
Trigger: GAACCCGGTGAGCCCATTTCAAATCATACCCCCTGC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGAGAGTCCACTTTCATaGTGCAGGGGGTATGATTTG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIESPLS*CRGYDL
Trigger: CAAATCATACCCCCTGCATCATGAAAGTGGACTCTC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATGAGGACATTCCTCTGTaGTGGAACGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDEDIPL*WNGLHS
Trigger: GCTATGGAGTCCGTTCCATCACAGAGGAATGTCCTC...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCAACAGGAAGATGGCATaGGGACATTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRINRKMA*GHSSVM
Trigger: CATCACAGAGGAATGTCCTCATGCCATCTTCCTGTT...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCCAGAGAGCTGGCACTaGATCAAGAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYPESWH*IKRLFL
Trigger: GAGGAAGAGCCTCTTGATTCAGTGCCAGCTCTCTGG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATATGTCATGGGCAGAATaGGGAAGGGGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDMSWAE*GRGSQR
Trigger: CCTCTGAGAGCCCCTTCCTCATTCTGCCCATGACAT...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAATTCCACAGTGGCATTaGGGAGGACCACAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRIPQWH*GGPQAQ
Trigger: TTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAAT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTATTCCACAGTGGCATTaGGGAGGACCACAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIIPQWH*GGPQAQ
Trigger: TTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAAT...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCGAATCTGTTCAAACTaGCTGAAATCAGCCACATAT +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHRICSN*LKSATY
Trigger: ATATGTGGCTGATTTCAGTCAGTTTGAACAGATTCG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTGGATGGCGCCCCTGTaGTCAGACATTGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIWMAPL*SDIALL
Trigger: CAACAGAGCAATGTCTGATCACAGGGGCGCCATCCA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGTCCGTGCAGTTTTTaGGAGTGCGTCTACACATTT +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGCPCSF*ECVYTF
Trigger: AAATGTGTAGACGCACTCTCAAAAACTGCACGGACA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCCAATAATAATGAAATaGAGAGAGGCCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIPIIMK*REARSG
Trigger: TCCAGACCTGGCCTCTCTTCATTTCATTATTATTGG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCTGATTTACTGCTGTTaGCTCTGGTTTCTCAAATGG +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAILIYCC*LWFLKW
Trigger: CCATTTGAGAAACCAGAGTCAACAGCAGTAAATCAG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTAAGGAGTGGGGTTGGGTaGCTCAGTGCTTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLRSGVG*LSALLS
Trigger: GGACAGCAAAGCACTGAGTCACCCAACCCCACTCCT...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTGGCCATAGGGTTAAGTaGAGTGAAGTGTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVGHRVK*SEVSEG
Trigger: ACCTTCAGACACTTCACTTCACTTAACCCTATGGCC...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTTTGTAAAAAGCCGCTaGTACAGTCATACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLFVKSR*YSHTSC
Trigger: ACAGGAAGTATGACTGTATCAGCGGCTTTTTACAAA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTCAGTCCAGACAGGTTaGCTTGGGAAAGATAGGTGT +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRISVQTG*LGKDRC
Trigger: ACACCTATCTTTCCCAAGGCAACCTGTCTGGACTGA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGCTACCATGGGATTCTaGTACTGCCTGCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRATMGF*YCLQRL
Trigger: CAGTCTTTGCAGGCAGTAGCAGAATCCCATGGTAGC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
CDS-3UTR GCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGTGAATGGCATCCATTaGCAGGCTCTGGAAACACTG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRVNGIH*QALETL
Trigger: CAGTGTTTCCAGAGCCTGGCAATGGATGCCATTCAC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR GCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAATTCTCACGTTGCTGTaGCCACTCTTGGACATGACG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRILTLL*PLLDMT
Trigger: CGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAAT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGTCAATTCTCACGTTaGTGTGCCCACTCTTGGACA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGCQFSR*CAHSWT
Trigger: TGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATGGTAGAGTAGGTATATaGCATCCACTTTGTCAATTC +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHGRVGI*HPLCQF
Trigger: GAATTGACAAAGTGGATGGCATATACCTACTCTACC...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTAGGGTCTGCAGGAGCTTaGCAGAGAGCTGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLGSAGA*QRAGTE
Trigger: TTCAGTGCCAGCTCTCTGGCAAGCTCCTGCAGACCC...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCTGCACAGTAAAATGTaGAATCTGGGCTTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAILHSKM*NLGFSE
Trigger: TTCGGAAAAGCCCAGATTGCACATTTTACTGTGCAG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTACTTCTCCTCGAGTTaGTGTTTCTCAGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIYFSSS*CFSESA
Trigger: TGCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTACTTCTCCTCGAGTTaGTGTTTCTCAGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQYFSSS*CFSESA
Trigger: TGCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTGTACAACCCACACCTaGAGGCTACGTGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPICTTHT*RLRAPV
Trigger: CACAGGAGCACGTAGCCTGCAGGTGTGGGTTGTACA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398932.5
ENST00000398934.5
CDS-3UTR GCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATGCTACCATGGGATTCTaGTACTGCCTTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDATMGF*YCLESR
Trigger: CCTGGACTCAAGGCAGTAGCAGAATCCCATGGTAGC...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398934.5
CDS-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGCTACCATGGGATTCTaGTACTGCCCCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYATMGF*YCPFLS
Trigger: GCTCAGGAAGGGGCAGTAGCAGAATCCCATGGTAGC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCTCTCCAAACACCTGTaGAAAAGAAAACTGATGCCT +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAILSKHL*KRKLMP
Trigger: AGGCATCAGTTTTCTTTTGCACAGGTGTTTGGAGAG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGGGTATGATTTGAAATaGGCTCACCGGGTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGGYDLK*AHRVLS
Trigger: ACTTAGAACCCGGTGAGCCCATTTCAAATCATACCC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCAACCAACAGGAAGATaGCATGAGGACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGQPTGR*HEDIPL
Trigger: CAGAGGAATGTCCTCATGCCATCTTCCTGTTGGTTG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCCCGCTTTTTGGGTCTaGCGATTTTGGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIPAFWV*RFWPGR
Trigger: CCTTCCTGGCCAAAATCGCCAGACCCAAAAAGCGGG...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATTCTCAGCCCGCTTTTTaGGTCTGGCGATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDSQPAF*VWRFWP
Trigger: TGGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGA...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCGGCTCTTCCTCATATTaGCTACCTGAATCACCAAGC +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGGSSSY*LPESPS
Trigger: GCTTGGTGATTCAGGTAGCCAATATGAGGAAGAGCC...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTCTGGCAGACAGCGCTaGTGGATTCCACAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPISGRQR*WIPQWH
Trigger: ATGCCACTGTGGAATCCACCAGCGCTGTCTGCCAGA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCCAGTAGATTTCCTCTaGGATATAAGATGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQPVDFL*DIRCSA
Trigger: AGCCGAACATCTTATATCCCAGAGGAAATCTACTGG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCCAGTAGATTTCCTCTaGGATATAAGATGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIPVDFL*DIRCSA
Trigger: AGCCGAACATCTTATATCCCAGAGGAAATCTACTGG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAAGGGTTAAACCTGGATaGCGCCCCTGTGATCAGACA +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKRVKPG*RPCDQT
Trigger: TGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTGGCTCCTCCTTAGTTaGGTGTTGAGTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIWLLLS*VLSVNL
Trigger: CAGATTCACACTCAACACCCAACTAAGGAGGAGCCA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTATAAGACGTGGCTTGTaGGGCACACTGATTTACTGC +
Preference number: 4 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVIRRGL*GTLIYC
Trigger: GCAGTAAATCAGTGTGCCCCACAAGCCACGTCTTAT...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTCAACCGCCTTCTCTTaGTCTTCTATTTTTACACAC +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLSTAFS*SSIFTH
Trigger: GTGTGTAAAAATAGAAGACCAAGAGAAGGCGGTTGA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGACCATTCCTCACTATaGAGACTCAGACAGTGCACG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRDHSSL*RLRQCT
Trigger: CGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGTGGGGCTTGAGAATCTaGGCTCCTGTGCACCCACGT +
Preference number: 4 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLWGLRI*APVHPR
Trigger: ACGTGGGTGCACAGGAGCCCAGATTCTCAAGCCCCA...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGAAATTTTAAGTAGGTaGGAAGGCATGGACACCAGA +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIEILSR*EGMDTR
Trigger: TCTGGTGTCCATGCCTTCCCACCTACTTAAAATTTC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGGAGTCCGTCCTTCTaGAATGGAGATTCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGWSPSF*NGDSVY
Trigger: GTAAACAGAATCTCCATTCCAGAAGGACGGACTCCA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTATTTTCTCCCTTTCTTaGTTAACTCCCACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIIFSLS*LTPTCP
Trigger: AGGACAGGTGGGAGTTAACCAAGAAAGGGAGAAAAT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGAGAGTCCACTTTCATaGTGCAGGGGGTATGATTTG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRESPLS*CRGYDL
Trigger: CAAATCATACCCCCTGCATCATGAAAGTGGACTCTC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATATTCCACAGTGGCATTaGGGAGGACCACAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDIPQWH*GGPQAQ
Trigger: TTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAAT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTCTGTTCAAACTGACTaGAATCAGCCACATATTTTC +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHSVQTD*NQPHIF
Trigger: GAAAATATGTGGCTGATTTCAGTCAGTTTGAACAGA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCGAATCTGTTCAAACTaGCTGAAATCAGCCACATAT +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQRICSN*LKSATY
Trigger: ATATGTGGCTGATTTCAGTCAGTTTGAACAGATTCG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATGAGATCAATGAATACTaGACCACAATTCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHEINEY*TTIQLS
Trigger: TGAGAGTTGAATTGTGGTTCAGTATTCATTGATCTC...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGAGGTTTCCACAGTTGTaGATTACAGATCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLRFPQL*ITDLIN
Trigger: ATTGATCAGATCTGTAATTCACAACTGTGGAAACCT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTTCAGAAAGTTGCTTTaGGAACACTGTCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGFRKLL*EHCPEH
Trigger: GTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCCAATAATAATGAAATaGAGAGAGGCCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDPIIMK*REARSG
Trigger: TCCAGACCTGGCCTCTCTTCATTTCATTATTATTGG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGAGTCATCTTGTTTATaGGTTTCTTACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQESSCL*VSYLQL
Trigger: GAGCTGAAGGTAAGAAACTCATAAACAAGATGACTC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGATTTCACTGATAACCTaGATCCACTTTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLISLIT*IHFIFP
Trigger: GGGGAAAATAAAGTGGATTCAGGTTATCAGTGAAAT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGGTAATTTCCCCAGGATaGAAAAGGGAGCCAATGCAT +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMVISPG*KREPMH
Trigger: ATGCATTGGCTCCCTTTTTCATCCTGGGGAAATTAC...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCCAAAATTGAGAGCGTaGGAGTATTCACTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGPKLRA*EYSLCH
Trigger: ATGGCACAGTGAATACTCTCACGCTCTCAATTTTGG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTAATGAAAGCCAAAATTaGGAGCGTGAGAGTATTCAC +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAINESQN*ERESIH
Trigger: GTGAATACTCTCACGCTCTCAATTTTGGCTTTCATT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGTCAAGTCAGAGAAATaGTCAGTCCAGACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRVKSEK*SVQTGC
Trigger: GCAACCTGTCTGGACTGAGCATTTCTCTGACTTGAC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAATTCTCACGTTGCTGTaGCCACTCTTGGACATGACG +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKILTLL*PLLDMT
Trigger: CGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAAT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGGTAGAGTAGGTATATaGCATCCACTTTGTCAATTC +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIGRVGI*HPLCQF
Trigger: GAATTGACAAAGTGGATGGCATATACCTACTCTACC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATACTTCTCCTCGAGTTaGTGTTTCTCAGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGYFSSS*CFSESA
Trigger: TGCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGACGGCTTCAGAAAGTTaGTTTGAGAACACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMTASES*FENTVQ
Trigger: CTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGT...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCCAGGGGATAATCCTATaGAGTTCCTTTATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIQGIIL*SSFMGK
Trigger: CTTGCCCATAAAGGAACTGCATAGGATTATCCCCTG...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTCAAGAGCTTTATTTTaGTCTTGGAATGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAISRALF*SWNVRG
Trigger: TCCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTCAAGAGCTTTATTTTaGTCTTGGAATGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQSRALF*SWNVRG
Trigger: TCCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGCACAAACCACCATTCTaGTGGAGCAAATCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMHKPPF*WSKSKL
Trigger: AAGCTTGGATTTGCTCCAGCAGAATGGTGGTTTGTG...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAAAACACTATAAGAAGTaGTGGGCTCCCATGCTCAGC +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRKHYKK*WAPMLS
Trigger: GCTGAGCATGGGAGCCCAGCACTTCTTATAGTGTTT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612702.4
CDS-3UTR CCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGGGTATGATTTGAAATaGGCTCACCGGGTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIGYDLK*AHRVLS
Trigger: ACTTAGAACCCGGTGAGCCCATTTCAAATCATACCC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGACAACCAACAGGAAGATaGCATGAGGACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRQPTGR*HEDIPL
Trigger: CAGAGGAATGTCCTCATGCCATCTTCCTGTTGGTTG...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATGAGGAGGAGTCCACGTaGAATTTGACAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDEEEST*NLTVAW
Trigger: CCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTC...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGAGGAGGAGTCCACGTaGAATTTGACAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYEEEST*NLTVAW
Trigger: CCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATTCTCCTTTAGGTTTTaGGGTGTGAGGTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRFSFRF*GVRSLR
Trigger: CCTGAGAGACCTCACACCCCAAAACCTAAAGGAGAA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCATATTTTCCATTTTTaGAGAGAGATACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHHIFHF*REIPQA
Trigger: TGCCTGTGGTATCTCTCTCCAAAAATGGAAAATATG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATTGTGTGTGTGCTTGGTaGGGGGAATCATGCGTACAT +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDCVCAW*GESCVH
Trigger: ATGTACGCATGATTCCCCCCACCAAGCACACACACA...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTAATACTCCACTACTTTaGCTCCTCCTTAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVNTPLL*LLLSWV
Trigger: CACCCAACTAAGGAGGAGCCAAAGTAGTGGAGTATT...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGAATACTCCACTACTTTaGCTCCTCCTTAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMNTPLL*LLLSWV
Trigger: CACCCAACTAAGGAGGAGCCAAAGTAGTGGAGTATT...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAAGCTCTTTAGATTTCTaGACACTCTGCGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGSSLDF*TLCVVL
Trigger: CAACACAACGCAGAGTGTCCAGAAATCTAAAGAGCT...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGAAATTTTAAGTAGGTaGGAAGGCATGGACACCAGA +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGEILSR*EGMDTR
Trigger: TCTGGTGTCCATGCCTTCCCACCTACTTAAAATTTC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTGGCAGCGAACAGGGTaGGTTTGTATCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIWQRTG*VCISTS
Trigger: TGAAGTGGAGATACAAACTCACCCTGTTCGCTGCCA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACTGGCAGCGAACAGGGTaGGTTTGTATCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYWQRTG*VCISTS
Trigger: TGAAGTGGAGATACAAACTCACCCTGTTCGCTGCCA...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATCGATGGCATAGTAGATaGCTCCAAAAAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDRWHSR*LQKGTR
Trigger: CCTGGTTCCTTTTTGGAGTCATCTACTATGCCATCG...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAACTCATATTGGCTACCTaGATCACCAAGCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKLILAT*ITKHSF
Trigger: GAAGCTGTGCTTGGTGATTCAGGTAGCCAATATGAG...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCGAATCTGTTCAAACTaGCTGAAATCAGCCACATAT +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDRICSN*LKSATY
Trigger: ATATGTGGCTGATTTCAGTCAGTTTGAACAGATTCG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACGAATCTGTTCAAACTaGCTGAAATCAGCCACATAT +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGRICSN*LKSATY
Trigger: ATATGTGGCTGATTTCAGTCAGTTTGAACAGATTCG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATGTCCGTGCAGTTTTTaGGAGTGCGTCTACACATTT +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRCPCSF*ECVYTF
Trigger: AAATGTGTAGACGCACTCTCAAAAACTGCACGGACA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCCCAATAATAATGAAATaGAGAGAGGCCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIPIIMK*REARSG
Trigger: TCCAGACCTGGCCTCTCTTCATTTCATTATTATTGG...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCCAATAATAATGAAATaGAGAGAGGCCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGPIIMK*REARSG
Trigger: TCCAGACCTGGCCTCTCTTCATTTCATTATTATTGG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAGAGTCATCTTGTTTATaGGTTTCTTACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FVFEGSSDVETACRVKPGESSCL*VSYLQL
Trigger: GAGCTGAAGGTAAGAAACTCATAAACAAGATGACTC...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGATTTCACTGATAACCTaGATCCACTTTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQISLIT*IHFIFP
Trigger: GGGGAAAATAAAGTGGATTCAGGTTATCAGTGAAAT...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAGGCCATAGGGTTAAGTaGAGTGAAGTGTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKGHRVK*SEVSEG
Trigger: ACCTTCAGACACTTCACTTCACTTAACCCTATGGCC...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTGTGAATGGCATCCATTaGCAGGCTCTGGAAACACTG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIVNGIH*QALETL
Trigger: CAGTGTTTCCAGAGCCTGGCAATGGATGCCATTCAC...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000613499.4
CDS-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACATTCTCACGTTGCTGTaGCCACTCTTGGACATGACG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYILTLL*PLLDMT
Trigger: CGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAAT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCCTGTGATCAGACATTaGTCTGTTGTAATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIPVIRH*SVVIKV
Trigger: CACTTTTATTACAACAGAGCAATGTCTGATCACAGG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGCATCTTCTAGTACCTaGCTGATGACTGACATAAAT +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDASSST*LMTDIN
Trigger: ATTTATGTCAGTCATCAGGCAGGTACTAGAAGATGC...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612702.4
CDS-3UTR GCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAGCTACCATGGGATTCTaGTACTGCCTCAGAATTTCC +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKATMGF*YCLRIS
Trigger: GGAAATTCTGAGGCAGTAGCAGAATCCCATGGTAGC...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613499.4
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTGTGCAGACTCCTGGCTaGATGGGAAGTTATGTCAAG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIVQTPG*MGSYVK
Trigger: CTTGACATAACTTCCCATCCAGCCAGGAGTCTGCAC...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGGGTATGATTTGAAATaGGCTCACCGGGTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRGYDLK*AHRVLS
Trigger: ACTTAGAACCCGGTGAGCCCATTTCAAATCATACCC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAGGCTCTTCCTCATATTaGCTACCTGAATCACCAAGC +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKGSSSY*LPESPS
Trigger: GCTTGGTGATTCAGGTAGCCAATATGAGGAAGAGCC...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAAATTTGACAGTGGCTTaGTTGAGGAGAATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKNLTVA*LRRIRS
Trigger: GGAGCGGATTCTCCTCAACCAAGCCACTGTCAAATT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATTTCTCCTTTAGGTTTTaGGGTGTGAGGTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDFSFRF*GVRSLR
Trigger: CCTGAGAGACCTCACACCCCAAAACCTAAAGGAGAA...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCCAGTAGATTTCCTCTaGGATATAAGATGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGPVDFL*DIRCSA
Trigger: AGCCGAACATCTTATATCCCAGAGGAAATCTACTGG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCATATTTTCCATTTTTaGAGAGAGATACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQHIFHF*REIPQA
Trigger: TGCCTGTGGTATCTCTCTCCAAAAATGGAAAATATG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTAAGGGTTAAACCTGGATaGCGCCCCTGTGATCAGACA +
Preference number: 4 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLRVKPG*RPCDQT
Trigger: TGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCT...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATTGTGTGTGTGCTTGGTaGGGGGAATCATGCGTACAT +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDCVCAW*GESCVH
Trigger: ATGTACGCATGATTCCCCCCACCAAGCACACACACA...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGGCAGCCCTAGCTCTCTaGCATTATATTCAGATTACA +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMAALAL*HYIQIT
Trigger: TGTAATCTGAATATAATGCCAGAGAGCTAGGGCTGC...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGGAAATGGGCATAGTTTaGGATTATGTGAACACTCTT +
Preference number: 4 (lower is better)
Translates to: HRTLQTSASENISCIVRQEMGIV*DYVNTL
Trigger: AAGAGTGTTCACATAATCCCAAACTATGCCCATTTC...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGACCATTCCTCACTATaGAGACTCAGACAGTGCACG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYDHSSL*RLRQCT
Trigger: CGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCTATCCTTCCTCTCCTaGCTGCTACGTAACACTTCG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYLSFLS*LLRNTS
Trigger: CGAAGTGTTACGTAGCAGCCAGGAGAGGAAGGATAG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 72 bp GAGTGCGTCTACACATTTTCGTTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: ECVYTFSFSQQS*CLKGVLMWKQL
Trigger: AAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAACGAAAATGTGTAGACGCACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGTGGCAGCGAACAGGGTaGGTTTGTATCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLWQRTG*VCISTS
Trigger: TGAAGTGGAGATACAAACTCACCCTGTTCGCTGCCA...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATCGATGGCATAGTAGATaGCTCCAAAAAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDRWHSR*LQKGTR
Trigger: CCTGGTTCCTTTTTGGAGTCATCTACTATGCCATCG...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAACAGGAAGATGGCATaGGGACATTCCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYNRKMA*GHSSVM
Trigger: CATCACAGAGGAATGTCCTCATGCCATCTTCCTGTT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTCATATTGGCTACCTaGATCACCAAGCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPILILAT*ITKHSF
Trigger: GAAGCTGTGCTTGGTGATTCAGGTAGCCAATATGAG...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATTCTGTTCAAACTGACTaGAATCAGCCACATATTTTC +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDSVQTD*NQPHIF
Trigger: GAAAATATGTGGCTGATTTCAGTCAGTTTGAACAGA...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCCGAATCTGTTCAAACTaGCTGAAATCAGCCACATAT +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIRICSN*LKSATY
Trigger: ATATGTGGCTGATTTCAGTCAGTTTGAACAGATTCG...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAATGTCCGTGCAGTTTTTaGGAGTGCGTCTACACATTT +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKCPCSF*ECVYTF
Trigger: AAATGTGTAGACGCACTCTCAAAAACTGCACGGACA...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATAGGTTTCCACAGTTGTaGATTACAGATCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDRFPQL*ITDLIN
Trigger: ATTGATCAGATCTGTAATTCACAACTGTGGAAACCT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCATCAGCAAGCATGACTaGGACAACAATTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIISKHD*DNNYSQ
Trigger: TTGAGAGTAATTGTTGTCTCAGTCATGCTTGCTGAT...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGAGTCATCTTGTTTATaGGTTTCTTACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIESSCL*VSYLQL
Trigger: GAGCTGAAGGTAAGAAACTCATAAACAAGATGACTC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGACACATTCTGCTTGAGTaGATGCGCAAATCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRHILLE*MRKSVF
Trigger: AAAGACAGATTTGCGCATTCACTCAAGCAGAATGTG...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACTGGCCACATTCTGCTTaGGTGAATGCGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYWPHSA*VNAQIC
Trigger: ACAGATTTGCGCATTCACTCAAGCAGAATGTGGCCA...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTATACCATGATTATGCTTaGAGAGCCAGGGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLYHDYA*RARACA
Trigger: TGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTA...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGTGGAAATTGAACAATaGGAACACATGGACACAGGA +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRVEIEQ*EHMDTG
Trigger: TCCTGTGTCCATGTGTTCTCATTGTTCAATTTCCAC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCTCATAGGTGGAAATTaGACAATGAGAACACATGGA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGLIGGN*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAATTTCCACCTATGAG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATTATCCACAGTTAGTGTaGGATTTCCGACATGCACCA +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDYPQLV*DFRHAP
Trigger: TGGTGCATGTCGGAAATCTCACACTAACTGTGGATA...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTTGTCTGGTCATTGTATaGTTGGGTTCAGTGATGACA +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLICLVIV*LGSVMT
Trigger: TGTCATCACTGAACCCAATCATACAATGACCAGACA...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTGTCAAGTCAGAGAAATaGTCAGTCCAGACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIVKSEK*SVQTGC
Trigger: GCAACCTGTCTGGACTGAGCATTTCTCTGACTTGAC...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACTGTCAATTCTCACGTTaGTGTGCCCACTCTTGGACA +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYCQFSR*CAHSWT
Trigger: TGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACA...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGGTAGAGTAGGTATATaGCATCCACTTTGTCAATTC +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIGRVGI*HPLCQF
Trigger: GAATTGACAAAGTGGATGGCATATACCTACTCTACC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTCTGCACAGTAAAATGTaGAATCTGGGCTTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLILHSKM*NLGFSE
Trigger: TTCGGAAAAGCCCAGATTGCACATTTTACTGTGCAG...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCCTGTGATCAGACATTaGTCTGTTGTAATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDPVIRH*SVVIKV
Trigger: CACTTTTATTACAACAGAGCAATGTCTGATCACAGG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIDVETA*RVKPGW
Trigger: CCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATC...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAACAGGGGATAATCCTATaGAGTTCCTTTATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKQGIIL*SSFMGK
Trigger: CTTGCCCATAAAGGAACTGCATAGGATTATCCCCTG...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTCAAGAGCTTTATTTTaGTCTTGGAATGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGSRALF*SWNVRG
Trigger: TCCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTCAAGAGCTTTATTTTaGTCTTGGAATGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRISRALF*SWNVRG
Trigger: TCCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGTCCATTGCCAGGCTCTaGAAACACTGGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLSIARL*KHWSLT
Trigger: AGTGAGTGACCAGTGTTTCCAGAGCCTGGCAATGGA...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCAACCAACAGGAAGATaGCATGAGGACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIQPTGR*HEDIPL
Trigger: CAGAGGAATGTCCTCATGCCATCTTCCTGTTGGTTG...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTAATTTGACAGTGGCTTaGTTGAGGAGAATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPINLTVA*LRRIRS
Trigger: GGAGCGGATTCTCCTCAACCAAGCCACTGTCAAATT...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTTCTCCTTTAGGTTTTaGGGTGTGAGGTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIFSFRF*GVRSLR
Trigger: CCTGAGAGACCTCACACCCCAAAACCTAAAGGAGAA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCATATTTTCCATTTTTaGAGAGAGATACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDHIFHF*REIPQA
Trigger: TGCCTGTGGTATCTCTCTCCAAAAATGGAAAATATG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAAAGGGAGTTCTGATGTaGAAACAGCTTGCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKKGVLM*KQLAGL
Trigger: TAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATTCTGTAAGTCTGGCTaGGACATGAGAATCTACACA +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRFCKSG*DMRIYT
Trigger: TGTGTAGATTCTCATGTCCCAGCCAGACTTACAGAA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGTAGGTGGGAAGGCATaGACACCAGATAAGATTTGG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYVGGKA*TPDKIW
Trigger: CCAAATCTTATCTGGTGTCCATGCCTTCCCACCTAC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTCTGTTCAAACTGACTaGAATCAGCCACATATTTTC +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGSVQTD*NQPHIF
Trigger: GAAAATATGTGGCTGATTTCAGTCAGTTTGAACAGA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATTTCAGAAAGTTGCTTTaGGAACACTGTCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDFRKLL*EHCPEH
Trigger: GTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAA...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACTTCAGAAAGTTGCTTTaGGAACACTGTCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYFRKLL*EHCPEH
Trigger: GTGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAA...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTGAGTCATCTTGTTTATaGGTTTCTTACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIESSCL*VSYLQL
Trigger: GAGCTGAAGGTAAGAAACTCATAAACAAGATGACTC...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTTTCCCCATTTTCTCTaGGTCCCAATGTTCATATTT +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIFPHFL*VPMFIF
Trigger: AAATATGAACATTGGGACTCAGAGAAAATGGGGAAA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTTTCCCCATTTTCTCTaGGTCCCAATGTTCATATTT +
Preference number: 4 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGFPHFL*VPMFIF
Trigger: AAATATGAACATTGGGACTCAGAGAAAATGGGGAAA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAAATGAAAGCCAAAATTaGGAGCGTGAGAGTATTCAC +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRNESQN*ERESIH
Trigger: GTGAATACTCTCACGCTCTCAATTTTGGCTTTCATT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGACCCACCAATCTATTTaGCTTTATAGAATGAACAGC +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMTHQSI*LYRMNS
Trigger: GCTGTTCATTCTATAAAGTCAAATAGATTGGTGGGT...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGCTTTGCCTACATATATaGCATCGTTGGCTTTTATAC +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMLCLHI*HRWLLY
Trigger: GTATAAAAGCCAACGATGTCATATATGTAGGCAAAG...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTCTTTGCCTACATATATaGCATCGTTGGCTTTTATAC +
Preference number: 4 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVLCLHI*HRWLLY
Trigger: GTATAAAAGCCAACGATGTCATATATGTAGGCAAAG...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTACCTGCCTGATGACTaGCATAAATTTCCCCCACAT +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIYLPDD*HKFPPH
Trigger: ATGTGGGGGAAATTTATGTCAGTCATCAGGCAGGTA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612702.4
CDS-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACATGGGATTCTGCTACTaGCTGCAAAGACTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYMGFCY*LQRLKS
Trigger: ACTCTTCAGTCTTTGCAGGCAGTAGCAGAATCCCAT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000612702.4
CDS-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACACGGCTTCAGAAAGTTaGTTTGAGAACACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYTASES*FENTVQ
Trigger: CTGGACAGTGTTCTCAAAGCAACTTTCTGAAGCCGT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCAGGGGATAATCCTATaGAGTTCCTTTATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIQGIIL*SSFMGK
Trigger: CTTGCCCATAAAGGAACTGCATAGGATTATCCCCTG...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGAAGAGTGCAGACTCCTaGCTGGATGGGAAGTTATGT +
Preference number: 4 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLKSADS*LDGKLC
Trigger: ACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTT...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTGGGTATGATTTGAAATaGGCTCACCGGGTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIGYDLK*AHRVLS
Trigger: ACTTAGAACCCGGTGAGCCCATTTCAAATCATACCC...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAACCAGTAGATTTCCTCTaGGATATAAGATGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKPVDFL*DIRCSA
Trigger: AGCCGAACATCTTATATCCCAGAGGAAATCTACTGG...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCATTCAAAAGCCTTTTTaGGTCAGGAATACTCCACTA +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIIQKPF*VRNTPL
Trigger: TAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAAT...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGTTCTCACTCATAGGTaGAAATTGAACAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIVLTHR*KLNNEN
Trigger: GTTCTCATTGTTCAATTTCCACCTATGAGTGAGAAC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAAGATCCCAGAGATCTaGGGAAGTGATGAAGAGATC +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYKIPEI*GSDEEI
Trigger: GATCTCTTCATCACTTCCCCAGATCTCTGGGATCTT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
CDS-3UTR CCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATATTTTCTCCCTTTCTTaGTTAACTCCCACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDIFSLS*LTPTCP
Trigger: AGGACAGGTGGGAGTTAACCAAGAAAGGGAGAAAAT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
3UTR CAA 72 bp TCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTaGTTAAGATACAGACCCCAATTCTGTAAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SNFHLYTNHLGF*LRYRPQFCKSG
Trigger: GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR CAA 72 bp AGAACACTGTCCAGAGCACAGCTTTCGAACTTTCATTaGTACACAAATCATCTGGGGTTCTTGTTAAGATAC +
Preference number: 4 (lower is better)
Translates to: RTLSRAQLSNFH*YTNHLGFLLRY
Trigger: GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTGTGCTCTGGACAGTGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
3UTR CAA 72 bp AATCAGAGACTAGATTTCGAGTGCACACCACAAAACTaGGAAATCAAGACTGGAAATGTTAGTACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: NQRLDFECTPQN*EIKTGNVSTFR
Trigger: GCGAAAGGTACTAACATTTCCAGTCTTGATTTCCAAGTTTTGTGGTGTGCACTCGAAATCTAGTCTCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 72 bp CTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTaGGTAAGTACACACTGCCAGGAGTTACAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LYIARDLSVIKI*VSTHCQELQAV
Trigger: CACTGCTTGTAACTCCTGGCAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATCTGTTCAAACTGACTaGAATCAGCCACATATTTTC +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRSVQTD*NQPHIF
Trigger: GAAAATATGTGGCTGATTTCAGTCAGTTTGAACAGA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAACGAATCTGTTCAAACTaGCTGAAATCAGCCACATAT +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKRICSN*LKSATY
Trigger: ATATGTGGCTGATTTCAGTCAGTTTGAACAGATTCG...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATCGAATCTGTTCAAACTaGCTGAAATCAGCCACATAT +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDRICSN*LKSATY
Trigger: ATATGTGGCTGATTTCAGTCAGTTTGAACAGATTCG...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCCAATAATAATGAAATaGAGAGAGGCCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYPIIMK*REARSG
Trigger: TCCAGACCTGGCCTCTCTTCATTTCATTATTATTGG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAATCAGCAAGCATGACTaGGACAACAATTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKISKHD*DNNYSQ
Trigger: TTGAGAGTAATTGTTGTCTCAGTCATGCTTGCTGAT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATATCAGCAAGCATGACTaGGACAACAATTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDISKHD*DNNYSQ
Trigger: TTGAGAGTAATTGTTGTCTCAGTCATGCTTGCTGAT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGTATGTATGCAGGGGCTaGATATTCATGGCCACATTC +
Preference number: 4 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLYVCRG*IFMATF
Trigger: GAATGTGGCCATGAATATTCAGCCCCTGCATACATA...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGCACTATTTTATTGCTaGATAAGACGTGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYALFYC*IRRGLW
Trigger: CCACAAGCCACGTCTTATTCAGCAATAAAATAGTGC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACATAGTAGCTCAGCCTTaGGAAACACAAACCACCATT +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYIVAQP*ETQTTI
Trigger: AATGGTGGTTTGTGTTTCTCAAGGCTGAGCTACTAT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAGGTAGAGTAGGTATATaGCATCCACTTTGTCAATTC +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKGRVGI*HPLCQF
Trigger: GAATTGACAAAGTGGATGGCATATACCTACTCTACC...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATGGTAGAGTAGGTATATaGCATCCACTTTGTCAATTC +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDGRVGI*HPLCQF
Trigger: GAATTGACAAAGTGGATGGCATATACCTACTCTACC...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGCACAGTAAAATGTaGAATCTGGGCTTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPILHSKM*NLGFSE
Trigger: TTCGGAAAAGCCCAGATTGCACATTTTACTGTGCAG...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCTGCACAGTAAAATGTaGAATCTGGGCTTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYLHSKM*NLGFSE
Trigger: TTCGGAAAAGCCCAGATTGCACATTTTACTGTGCAG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACTACTTCTCCTCGAGTTaGTGTTTCTCAGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYYFSSS*CFSESA
Trigger: TGCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTA...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTACAGGGGATAATCCTATaGAGTTCCTTTATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLQGIIL*SSFMGK
Trigger: CTTGCCCATAAAGGAACTGCATAGGATTATCCCCTG...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATTTCATGGCCACATTCTaGTTGAGTGAATGCGCAAAT +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDFMATF*LSECAN
Trigger: ATTTGCGCATTCACTCAAGCAGAATGTGGCCATGAA...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTCACTATTCTTACACCTaGCTTAAACTAGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIHYSYT*LKLVQF
Trigger: GAACTGAACTAGTTTAAGGCAGGTGTAAGAATAGTG...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATAGACTAGATTTCGAGTaGACACCACAAAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDRLDFE*TPQNLE
Trigger: TTCCAAGTTTTGTGGTGTGCACTCGAAATCTAGTCT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGCTCTTTAGATTTCTaGACACTCTGCGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYSSLDF*TLCVVL
Trigger: CAACACAACGCAGAGTGTCCAGAAATCTAAAGAGCT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGAGGAGTTACAAGCAGTaGGATTGTTTGCATATAAAA +
Preference number: 4 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMRSYKQ*DCLHIK
Trigger: TTTTATATGCAAACAATCCCACTGCTTGTAACTCCT...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 72 bp ATGACTGAGACAACAATTACTCTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGGATAATCCTATGCAGT +
Preference number: 4 (lower is better)
Translates to: MTETTITLKSFI*LLECQGIILCS
Trigger: ACTGCATAGGATTATCCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAGAGTAATTGTTGTCTCAGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAATCTGTTCAAACTGACTaGAATCAGCCACATATTTTC +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKSVQTD*NQPHIF
Trigger: GAAAATATGTGGCTGATTTCAGTCAGTTTGAACAGA...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAATCAAAGGAAAAGATTaGTTTTGTATGTCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKIKGKD*FCMSVQ
Trigger: CTGCACGGACATACAAAATCAATCTTTTCCTTTGAT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAAGGTTTCCACAGTTGTaGATTACAGATCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKRFPQL*ITDLIN
Trigger: ATTGATCAGATCTGTAATTCACAACTGTGGAAACCT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTATCAGCAAGCATGACTaGGACAACAATTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIISKHD*DNNYSQ
Trigger: TTGAGAGTAATTGTTGTCTCAGTCATGCTTGCTGAT...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR TCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATGAGTCATCTTGTTTATaGGTTTCTTACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDESSCL*VSYLQL
Trigger: GAGCTGAAGGTAAGAAACTCATAAACAAGATGACTC...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCTCATAGGTGGAAATTaGACAATGAGAACACATGGA +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYLIGGN*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAATTTCCACCTATGAG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATTTTGTAAAAAGCCGCTaGTACAGTCATACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDFVKSR*YSHTSC
Trigger: ACAGGAAGTATGACTGTATCAGCGGCTTTTTACAAA...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATCCTGTGATCAGACATTaGTCTGTTGTAATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDPVIRH*SVVIKV
Trigger: CACTTTTATTACAACAGAGCAATGTCTGATCACAGG...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTCAAGAGCTTTATTTTaGTCTTGGAATGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPISRALF*SWNVRG
Trigger: TCCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTCAACCGCCTTCTCTTaGTCTTCTATTTTTACACAC +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPISTAFS*SSIFTH
Trigger: GTGTGTAAAAATAGAAGACCAAGAGAAGGCGGTTGA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAACCTTAGACTACACTTaGAAAACCACGATTTATACT +
Preference number: 4 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRTLDYT*KTTIYT
Trigger: AGTATAAATCGTGGTTTTCCAAGTGTAGTCTAAGGT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613499.4
3UTR CAA 72 bp ATAATTAAAGACAACATCCTCCCTCTCGTTCATGGATaGAGGGCATTCTTTAAACTTTCACAAACTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IIKDNILPLVHG*RAFFKLSQTFL
Trigger: GAGGAAAGTTTGTGAAAGTTTAAAGAATGCCCTCAATCCATGAACGAGAGGGAGGATGTTGTCTTTAATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 72 bp CAGATTACAAAGACTTTGCCTACATATATGACATCGTaGGCTTTTATACTCGTGTATCAGTTCTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QITKTLPTYMTS*AFILVYQFCPL
Trigger: CAAAGGACAGAACTGATACACGAGTATAAAAGCCAACGATGTCATATATGTAGGCAAAGTCTTTGTAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
3UTR CAA 72 bp TCACTTAAGAACCATGGGAAAGCAAGGACATATATCTaGCAACACTGTATAAGGATCAGATGTGGTTCTATA +
Preference number: 4 (lower is better)
Translates to: SLKNHGKARTYI*QHCIRIRCGSI
Trigger: TATAGAACCACATCTGATCCTTATACAGTGTTGCAAGATATATGTCCTTGCTTTCCCATGGTTCTTAAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAATGAACAGCAAATATaGAGAAACAGTCAACCAAGC +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYNEQQI*RNSQPS
Trigger: GCTTGGTTGACTGTTTCTTCATATTTGCTGTTCATT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTAATGAACAGCAAATATaGAGAAACAGTCAACCAAGC +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPINEQQI*RNSQPS
Trigger: GCTTGGTTGACTGTTTCTTCATATTTGCTGTTCATT...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCCTGTGATCAGACATTaGTCTGTTGTAATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYPVIRH*SVVIKV
Trigger: CACTTTTATTACAACAGAGCAATGTCTGATCACAGG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR GCA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCACTATTCTTACACCTaGCTTAAACTAGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYHYSYT*LKLVQF
Trigger: GAACTGAACTAGTTTAAGGCAGGTGTAAGAATAGTG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp AGAAAATTAAGAGCCTCTTGTACCTACCCAGAGTTTAACAATCAGAGACTAGATGTTCTCACTCATAGGTaGAAATTGAACAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: RKLRASCTYPEFNNQRLDVLTHR*KLNNEN
Trigger: GTTCTCATTGTTCAATTTCCACCTATGAGTGAGAAC...ATCTAGTCTCTGATTGTTAAACTCTGGGTAGGTACAAGAGGCTCTTAATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTATAATTCCTCAAAAATaGATCCAAGTCGGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIIIPQK*IQVGCY
Trigger: ATAGCAGCCGACTTGGATCCATTTTTGAGGAATTAT...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTAATGTGGTCAAATGTCTaGCATTTTGAACATCATGAC +
Preference number: 4 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLMWSNV*HFEHHD
Trigger: GTCATGATGTTCAAAATGTCAGACATTTGACCACAT...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR TCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGACCCACCAATCTATTTaGCTTTATAGAATGAACAGC +
Preference number: 4 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLTHQSI*LYRMNS
Trigger: GCTGTTCATTCTATAAAGTCAAATAGATTGGTGGGT...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGTTCTGCTTGAGTGAATaGGCAAATCTGTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLFCLSE*ANLSLF
Trigger: AAACAAAGACAGATTTGCGCATTCACTCAAGCAGAA...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CCA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTAATCTACATGTCATTTaGGATTTCCATCACCATAAC +
Preference number: 4 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPINLHVI*DFHHHN
Trigger: GTTATGGTGATGGAAATCCCAAATGACATGTAGATT...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR GCA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTATATTTGTCAAGGACTTaGTGTCTTAACCTCAAATGT +
Preference number: 4 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLYLSRT*CLNLKC
Trigger: ACATTTGAGGTTAAGACAGCAAGTCCTTGACAAATA...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS CCA 90 bp TCTTCTTCAAGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCCGGCACACGGGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SSSRQVERPRSPSPT*LPWDSATAGTRGGR
Trigger: CCTGCCTCCCCGTGTGCCGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCTTGAAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398927.1
CDS-3UTR CAA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAATCCGCTCCCCCTCCTaGGTGACGTGGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPIRSPS*VTWVCR
Trigger: CCTGCAGACCCACGTCACCAAGGAGGGGGAGCGGAT...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAACGGGGTCTGTTGGCCTaGAGCCCAGCCCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASERGLLA*SPAPAV
Trigger: CACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCCG...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAATGACGCGGGGTCTGTaGGCCTTGAGCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASEMTRGL*ALSPAP
Trigger: TGGGGCTGGGCTCAAGGCCAACAGACCCCGCGTCAT...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAATCCGCTCCCCCTCCTaGGTGACGTGGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAIRSPS*VTWVCR
Trigger: CCTGCAGACCCACGTCACCAAGGAGGGGGAGCGGAT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGATCCGCTCCCCCTCCTaGGTGACGTGGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLIRSPS*VTWVCR
Trigger: CCTGCAGACCCACGTCACCAAGGAGGGGGAGCGGAT...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS GCA 90 bp TCCTCGCTCCCCTTCACCCACCTGGCTACCATGGGATTCTGCTACTaGCTCAGAATTTCCGATTCAGCAGGTTTGGGGTGCAGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SSLPFTHLATMGFCY*LRISDSAGLGCSQR
Trigger: CCTCTGGCTGCACCCCAAACCTGCTGAATCGGAAATTCTGAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS CCA 90 bp TCTTCTTCAAGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCCTTGAGTCCAGGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSSRQVERPRSPSPT*LPWDSATALSPGAG
Trigger: CCCAGCACCTGGACTCAAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCTTGAAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398934.5
ENST00000438657.5
CDS-3UTR CAA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCATTGACAGTGGCTTGGTaGAGGAGAATCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPLTVAW*RRIRSP
Trigger: GGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAA...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCACCCAAAGGAGTGGGGTaGGGTGACTCAGTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPPKGVG*GDSVLC
Trigger: GCAAAGCACTGAGTCACCCAACCCCACTCCTTTGGG...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS GCA 90 bp AGAACGTCCTCGCTCCCCTTCACCCACCTGGCTACCATGGGATTCTaGTACTGCCTCAGAATTTCCGATTCAGCAGGTTTGGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RTSSLPFTHLATMGF*YCLRISDSAGLGCS
Trigger: GCTGCACCCCAAACCTGCTGAATCGGAAATTCTGAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGCGGGGTCTGTTGGCCTaGAGCCCAGCCCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLRGLLA*SPAPAV
Trigger: CACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCCG...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTTGCTGTGCCCACTCTaGGACATGACGCGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLLLCPL*DMTRGL
Trigger: CAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAA...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATTGCTGTGCCCACTCTaGGACATGACGCGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASELLCPL*DMTRGL
Trigger: CAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAGATTCTGCTACTGCCTaGAGTCCAGGTGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSADSATA*SPGAGA
Trigger: GGCCCCAGCACCTGGACTCAAGGCAGTAGCAGAATC...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398934.5
CDS CCA 90 bp AGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTGGCTACCATaGGATTCTGCTACTGCCTCAGAATTTCCGATTCAGCAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: RQVERPRSPSPTWLP*DSATASEFPIQQVW
Trigger: CCAAACCTGCTGAATCGGAAATTCTGAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS-3UTR CAA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGTTGCTGTGCCCACTCTaGGACATGACGCGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCALLCPL*DMTRGL
Trigger: CAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAA...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGGTCTCAGCCCGCTTTTaGGGTCTGGCGATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLVSARF*GLAILA
Trigger: GGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGAC...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAGAGTCCACGTGGAATTaGACAGTGGCTTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPESTWN*TVAWLR
Trigger: CCTCAACCAAGCCACTGTCAAATTCCACGTGGACTC...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS CCA 90 bp GCATTGAGGAGGACCACAAGCTCAAACTCCTTCTCCTTTAGGTTTTaGGGTGTGAGGTCTCTCAGGGGGCTCGTCTCATCCAGCACATGG +
Preference number: 5 (lower is better)
Translates to: ALRRTTSSNSFSFRF*GVRSLRGLVSSSTW
Trigger: CCATGTGCTGGATGAGACGAGCCCCCTGAGAGACCTCACACCCCAAAACCTAAAGGAGAAGGAGTTTGAGCTTGTGGTCCTCCTCAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS CCA 90 bp TCCTTCACCACGCTGTACAGCTATCCTTCCTCTGAAGACGCTGCTTaGTCATTACCTCACTGGGCTGGGAATCCAGCAATCCCACAGGGA +
Preference number: 5 (lower is better)
Translates to: SFTTLYSYPSSEDAA*SLPHWAGNPAIPQG
Trigger: TCCCTGTGGGATTGCTGGATTCCCAGCCCAGTGAGGTAATGACCAAGCAGCGTCTTCAGAGGAAGGATAGCTGTACAGCGTGGTGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCGGGGTCTGTTGGCCTaGAGCCCAGCCCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDRGLLA*SPAPAV
Trigger: CACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCCG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACGGGGTCTGTTGGCCTaGAGCCCAGCCCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGRGLLA*SPAPAV
Trigger: CACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCCG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTATCCGCTCCCCCTCCTaGGTGACGTGGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIIRSPS*VTWVCR
Trigger: CCTGCAGACCCACGTCACCAAGGAGGGGGAGCGGAT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS TCA 90 bp ATGTTCGGCTCTGGCAGACAGCGCTGGTGGATTCCACAGTGGCATTaGGGAGGACCACAAGCTCAAACTCCTTCTCCTTTAGGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: MFGSGRQRWWIPQWH*GGPQAQTPSPLGFG
Trigger: CCCAAAACCTAAAGGAGAAGGAGTTTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAATCCACCAGCGCTGTCTGCCAGAGCCGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS CCA 90 bp TACAGCTATCCTTCCTCTGAAGACGCTGCTTGGTCATTACCTCACTaGGCTGGGAATCCAGCAATCCCACAGGGAGGCATGCTTCAACGT +
Preference number: 5 (lower is better)
Translates to: YSYPSSEDAAWSLPH*AGNPAIPQGGMLQR
Trigger: ACGTTGAAGCATGCCTCCCTGTGGGATTGCTGGATTCCCAGCCCAGTGAGGTAATGACCAAGCAGCGTCTTCAGAGGAAGGATAGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CCA 90 bp TCTTCTTCAAGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCCTCAGAATTTCCGATTCAG +
Preference number: 5 (lower is better)
Translates to: SSSRQVERPRSPSPT*LPWDSATASEFPIQ
Trigger: CTGAATCGGAAATTCTGAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCTTGAAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS CCA 90 bp TCTTCTTCAAGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCCTTCTCATTGAGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SSSRQVERPRSPSPT*LPWDSATAFSLSPS
Trigger: TGAAGGACTCAATGAGAAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCTTGAAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547595.5
ENST00000548700.5
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAATGACGCGGGGTCTGTaGGCCTTGAGCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGMTRGL*ALSPAP
Trigger: TGGGGCTGGGCTCAAGGCCAACAGACCCCGCGTCAT...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGTTGTCAATTCTCACGTaGCTGTGCCCACTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLLSILT*LCPLLD
Trigger: GTCCAAGAGTGGGCACAGCAACGTGAGAATTGACAA...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATGCAGGGGGTATGATTaGAAATGGGCTCACCGGGTT +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASECRGYD*KWAHRV
Trigger: AACCCGGTGAGCCCATTTCAAATCATACCCCCTGCA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATGCAGGGGGTATGATTaGAAATGGGCTCACCGGGTT +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSACRGYD*KWAHRV
Trigger: AACCCGGTGAGCCCATTTCAAATCATACCCCCTGCA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGAATCCGCTCCCCCTCCTaGGTGACGTGGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGIRSPS*VTWVCR
Trigger: CCTGCAGACCCACGTCACCAAGGAGGGGGAGCGGAT...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAGAGTCCACGTGGAATTaGACAGTGGCTTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAESTWN*TVAWLR
Trigger: CCTCAACCAAGCCACTGTCAAATTCCACGTGGACTC...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATGTGAATGGCATCCATaGCCAGGCTCTGGTCACTCA +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASECEWHP*PGSGHS
Trigger: TGAGTGACCAGAGCCTGGCAATGGATGCCATTCACA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398932.5
CDS GCA 90 bp GCCGGGAACAAGCTGTCTGTGAGGCCCCTAGCATCTTCTAGTACCTaGCTGATGACTGACATAAATTTCCCCCACATTCCTGGTCACTCA +
Preference number: 5 (lower is better)
Translates to: AGNKLSVRPLASSST*LMTDINFPHIPGHS
Trigger: TGAGTGACCAGGAATGTGGGGGAAATTTATGTCAGTCATCAGGCAGGTACTAGAAGATGCTAGGGGCCTCACAGACAGCTTGTTCCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417042.5
ENST00000612702.4
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCATGACGCGGGGTCTGTaGGCCTTGAGCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIMTRGL*ALSPAP
Trigger: TGGGGCTGGGCTCAAGGCCAACAGACCCCGCGTCAT...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTTGCTGTGCCCACTCTaGGACATGACGCGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: HRTLQTSASENISCIVRQLLCPL*DMTRGL
Trigger: CAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTTGGGTCTGGCGATTTaGGCCAGGAAGGTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHLGLAI*ARKVPV
Trigger: CACCGGAACCTTCCTGGCCAAAATCGCCAGACCCAA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATGTCTCAGCCCGCTTTTaGGGTCTGGCGATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHVSARF*GLAILA
Trigger: GGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGAC...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGTCTCAGCCCGCTTTTaGGGTCTGGCGATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLVSARF*GLAILA
Trigger: GGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGAC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGTTGACAGTGGCTTGGTaGAGGAGAATCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLLTVAW*RRIRSP
Trigger: GGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAA...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGGACACTCTGCGTaGTGTTGTAATTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSASGHSA*CCNFPR
Trigger: CCTGGGGAAATTACAACACAACGCAGAGTGTCCAGA...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCACCTCCAATCACCTTCTaGGAAGCTCTTTACTCTTCT +
Preference number: 5 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPPPITF*EALYSS
Trigger: AGAAGAGTAAAGAGCTTCCAAGAAGGTGATTGGAGG...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATAACTCCCACCTGTCCTaGAGTCCAGGTGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDNSHLS*SPGAGA
Trigger: GGCCCCAGCACCTGGACTCAAGGACAGGTGGGAGTT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS CCA 90 bp CCCACCTGTCCTGCAAAGACTGAAGAGTGCAGACTCCTGGCTGGATaGGAAGTTATGTCAAGTCAGAGAAATGCTCAGTCCAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: PTCPAKTEECRLLAG*EVMSSQRNAQSRQV
Trigger: AACCTGTCTGGACTGAGCATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGACAGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398925.5
ENST00000417042.5
CDS-3UTR CAA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATCGGGGTCTGTTGGCCTaGAGCCCAGCCCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDRGLLA*SPAPAV
Trigger: CACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCCG...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAATGACGCGGGGTCTGTaGGCCTTGAGCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRMTRGL*ALSPAP
Trigger: TGGGGCTGGGCTCAAGGCCAACAGACCCCGCGTCAT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATTTGCTGTGCCCACTCTaGGACATGACGCGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDLLCPL*DMTRGL
Trigger: CAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAA...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATTGCTGTGCCCACTCTaGGACATGACGCGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGLLCPL*DMTRGL
Trigger: CAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAATCCGCTCCCCCTCCTaGGTGACGTGGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRIRSPS*VTWVCR
Trigger: CCTGCAGACCCACGTCACCAAGGAGGGGGAGCGGAT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTTGACAGTGGCTTGGTaGAGGAGAATCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: HRTLQTSASENISCIVRQLTVAW*RRIRSP
Trigger: GGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAGTACTTCTCCTCGAGTaGCTGTTTCTCAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAVLLLE*LFLRIC
Trigger: GCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTAC...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATACTCTCCACCCCAGCTaGCAGAAGCTGAGCATTCAG +
Preference number: 5 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHTLHPS*QKLSIQ
Trigger: CTGAATGCTCAGCTTCTGCAAGCTGGGGTGGAGAGT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398932.5
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACATTTTCTCCCTTTCTaGGTTAACTCCCACCTGTCC +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAHFLPF*VNSHLS
Trigger: GGACAGGTGGGAGTTAACCAAGAAAGGGAGAAAATG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398930.5
CDS GCA 90 bp GTGCAGACTCCTGGCTGGATGGGAAGTTATGTCAAGTCAGAGAAATaGTCAGTCCAGACAGGTTGCCTTGGGAAAGATAGGTGTTTAGGG +
Preference number: 5 (lower is better)
Translates to: VQTPGWMGSYVKSEK*SVQTGCLGKDRCLG
Trigger: CCCTAAACACCTATCTTTCCCAAGGCAACCTGTCTGGACTGAGCATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000417042.5
ENST00000443341.5
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000612702.4
ENST00000613499.4
CDS CCA 90 bp CTGCTACTGCCTGCAAAGACTGAAGAGTGCAGACTCCTGGCTGGATaGGAAGTTATGTCAAGTCAGAGAAATGCTCAGTCCAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: LLLPAKTEECRLLAG*EVMSSQRNAQSRQV
Trigger: AACCTGTCTGGACTGAGCATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGCAGTAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398928.5
ENST00000398938.7
ENST00000612702.4
CDS CCA 90 bp GAGAGATACCACAGGCACAAACTCAAAACCCCAGTAGATTTCCTCTaGGATATAAGATGTTCGGCTCTGGCAGACAGCGCTGGTGGATTC +
Preference number: 5 (lower is better)
Translates to: ERYHRHKLKTPVDFL*DIRCSALADSAGGF
Trigger: GAATCCACCAGCGCTGTCTGCCAGAGCCGAACATCTTATATCCCAGAGGAAATCTACTGGGGTTTTGAGTTTGTGCCTGTGGTATCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS CCA 90 bp TCTTCTTCAAGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCATTTATTGCTTTCATGAGA +
Preference number: 5 (lower is better)
Translates to: SSSRQVERPRSPSPT*LPWDSATAFIAFMR
Trigger: TCTCATGAAAGCAATAAATGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCTTGAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551422.5
CDS-3UTR CAA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATATGACGCGGGGTCTGTaGGCCTTGAGCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDMTRGL*ALSPAP
Trigger: TGGGGCTGGGCTCAAGGCCAACAGACCCCGCGTCAT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATTGCAGGGGGTATGATTaGAAATGGGCTCACCGGGTT +
Preference number: 5 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHCRGYD*KWAHRV
Trigger: AACCCGGTGAGCCCATTTCAAATCATACCCCCTGCA...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATTTGGGTCTGGCGATTTaGGCCAGGAAGGTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDLGLAI*ARKVPV
Trigger: CACCGGAACCTTCCTGGCCAAAATCGCCAGACCCAA...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATTGACAGTGGCTTGGTaGAGGAGAATCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGLTVAW*RRIRSP
Trigger: GGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGAGTCCACGTGGAATTaGACAGTGGCTTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLESTWN*TVAWLR
Trigger: CCTCAACCAAGCCACTGTCAAATTCCACGTGGACTC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAACATATTTTCCATTTTaGGAGAGAGATACCACAGGC +
Preference number: 5 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPTYFPF*ERDTTG
Trigger: GCCTGTGGTATCTCTCTCCAAAAATGGAAAATATGT...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAACTTCAGAAAGTTGCTTaGAGAACACTGTCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASELQKVA*RTLSRA
Trigger: TGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAG...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp AAGGAGTGGGGTTGGGTGACTCAGTGCTTTGCTGTCCAGAGCCACTGTCTGCCAAGCTTTATTTTGCTCTaGGAATGTCAGGGGATAATC +
Preference number: 5 (lower is better)
Translates to: KEWGWVTQCFAVQSHCLPSFILL*ECQGII
Trigger: GATTATCCCCTGACATTCCAAGAGCAAAATAAAGCT...TGGCAGACAGTGGCTCTGGACAGCAAAGCACTGAGTCACCCAACCCCACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAACTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASELKSFI*LLECQG
Trigger: CCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAG...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACCCAAAGGAGTGGGGTaGGGTGACTCAGTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGPKGVG*GDSVLC
Trigger: GCAAAGCACTGAGTCACCCAACCCCACTCCTTTGGG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS TCA 90 bp GGGCCGGAAAGGCTGTTGTTGGAAACATGGTTAAGGCCCCTCACTTaGTGGATGAACCTCCAGGCATTTATTGCTTTCATGAGACAGATG +
Preference number: 5 (lower is better)
Translates to: GPERLLLETWLRPLT*WMNLQAFIAFMRQM
Trigger: CATCTGTCTCATGAAAGCAATAAATGCCTGGAGGTTCATCCATCAAGTGAGGGGCCTTAACCATGTTTCCAACAACAGCCTTTCCGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS GCA 90 bp ACAGCAATCTTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGGCGCCCCTGTGATCAGACATTGCTC +
Preference number: 5 (lower is better)
Translates to: TAIFVFEGSSDVETA*RVKPGWRPCDQTLL
Trigger: GAGCAATGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAAGATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS CCA 90 bp CCAACATCTCCTGCAAAGACTGAAGAGTGCAGACTCCTGGCTGGATaGGAAGTTATGTCAAGTCAGAGAAATGCTCAGTCCAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: PTSPAKTEECRLLAG*EVMSSQRNAQSRQV
Trigger: AACCTGTCTGGACTGAGCATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGAGATGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443341.5
CDS CCA 90 bp CCATGGGATTCTGCTACTGCCTCAGAATTTCCGATTCAGCAGGTTTaGGGTGCAGCCAGAGGGTCTGTAGTTCTGATAATTTCCCAGATA +
Preference number: 5 (lower is better)
Translates to: PWDSATASEFPIQQV*GAARGSVVLIISQI
Trigger: TATCTGGGAAATTATCAGAACTACAGACCCTCTGGCTGCACCCCAAACCTGCTGAATCGGAAATTCTGAGGCAGTAGCAGAATCCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACATGACGCGGGGTCTGTaGGCCTTGAGCCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYMTRGL*ALSPAP
Trigger: TGGGGCTGGGCTCAAGGCCAACAGACCCCGCGTCAT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGTGCAGGGGGTATGATTaGAAATGGGCTCACCGGGTT +
Preference number: 5 (lower is better)
Translates to: HRTLQTSASENISCIVRQCRGYD*KWAHRV
Trigger: AACCCGGTGAGCCCATTTCAAATCATACCCCCTGCA...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTTGGGTCTGGCGATTTaGGCCAGGAAGGTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMLGLAI*ARKVPV
Trigger: CACCGGAACCTTCCTGGCCAAAATCGCCAGACCCAA...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGTCTCAGCCCGCTTTTaGGGTCTGGCGATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIVSARF*GLAILA
Trigger: GGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGAC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTATCCGCTCCCCCTCCTaGGTGACGTGGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIIRSPS*VTWVCR
Trigger: CCTGCAGACCCACGTCACCAAGGAGGGGGAGCGGAT...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTTGACAGTGGCTTGGTaGAGGAGAATCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGLTVAW*RRIRSP
Trigger: GGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGGAATTTGACAGTGGCTaGGTTGAGGAGAATCCGCTC +
Preference number: 5 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLEFDSG*VEENPL
Trigger: GAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTC...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGAGTCCACGTGGAATTaGACAGTGGCTTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIESTWN*TVAWLR
Trigger: CCTCAACCAAGCCACTGTCAAATTCCACGTGGACTC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGAGCTGGGCATATATATaGAAGACTCAAATAAGGGAG +
Preference number: 5 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLSWAYI*KTQIRE
Trigger: CTCCCTTATTTGAGTCTTCAATATATATGCCCAGCT...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGAGAAATGGGCATAGTTaGGGATTATGTGAACACTCT +
Preference number: 5 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLRNGHS*GLCEHS
Trigger: AGAGTGTTCACATAATCCCAAACTATGCCCATTTCT...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGTCATTAAGTAGCATTTaGGAGTCCGTCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLSLSSI*ESVLLE
Trigger: TTCCAGAAGGACGGACTCCAAAATGCTACTTAATGA...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp GGGAAGACCATTCCTCACTATGGAGACTCAGACAGTGCACGCTGCTCCACACTGGCAAGGACATATATCTaGCAACACTGTATAAGGATC +
Preference number: 5 (lower is better)
Translates to: GKTIPHYGDSDSARCSTLARTYI*QHCIRI
Trigger: GATCCTTATACAGTGTTGCAAGATATATGTCCTTGC...CAGTGTGGAGCAGCGTGCACTGTCTGAGTCTCCATAGTGAGGAATGGTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAAATAGTAGCTCAGCCTaGAGAAACACAAACCACCAT +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSANSSSA*RNTNHH
Trigger: ATGGTGGTTTGTGTTTCTCAAGGCTGAGCTACTATT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS TCA 90 bp CATTTTCTCCCTTTCTTGGTTAACTCCCACCTGTCCTGCAAAGACTaGAGAGTGCAGACTCCTGGCTGGATGGGAAGTTATGTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: HFLPFLVNSHLSCKD*RVQTPGWMGSYVKS
Trigger: TGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGACAGGTGGGAGTTAACCAAGAAAGGGAGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398925.5
ENST00000417042.5
CDS CCA 90 bp GAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATaGCGCCCCTGTGATCAGACATTGCTCTGTTGTAATAAAAGTGTC +
Preference number: 5 (lower is better)
Translates to: EGSSDVETACRVKPG*RPCDQTLLCCNKSV
Trigger: GACACTTTTATTACAACAGAGCAATGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATTTGCTGTGCCCACTCTaGGACATGACGCGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDLLCPL*DMTRGL
Trigger: CAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAA...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTGTCAATTCTCACGTaGCTGTGCCCACTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAILSILT*LCPLLD
Trigger: GTCCAAGAGTGGGCACAGCAACGTGAGAATTGACAA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATGCAGGGGGTATGATTaGAAATGGGCTCACCGGGTT +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGCRGYD*KWAHRV
Trigger: AACCCGGTGAGCCCATTTCAAATCATACCCCCTGCA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATTGGGTCTGGCGATTTaGGCCAGGAAGGTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRLGLAI*ARKVPV
Trigger: CACCGGAACCTTCCTGGCCAAAATCGCCAGACCCAA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGTCTCAGCCCGCTTTTaGGGTCTGGCGATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRVSARF*GLAILA
Trigger: GGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGAC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATTGACAGTGGCTTGGTaGAGGAGAATCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRLTVAW*RRIRSP
Trigger: GGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGAATTTGACAGTGGCTaGGTTGAGGAGAATCCGCTC +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIEFDSG*VEENPL
Trigger: GAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATGTACTTCTCCTCGAGTaGCTGTTTCTCAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHVLLLE*LFLRIC
Trigger: GCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTAC...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCATCTGCCCTGTGATCAGACATaGCTCTGTTGTAATAAAAGT +
Preference number: 5 (lower is better)
Translates to: SAPLLPHGPTGPYKHQHLPCDQT*LCCNKS
Trigger: ACTTTTATTACAACAGAGCAATGTCTGATCACAGGG...CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTG +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASEFSQQS*CLKGVL
Trigger: CAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACTTTCGAACTTTCATTaGTACACAAATCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSALSNFH*YTNHLG
Trigger: CCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGCTTTATTTTGCTCTaGGAATGTCAGGGGATAATC +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASESFILL*ECQGII
Trigger: GATTATCCCCTGACATTCCAAGAGCAAAATAAAGCT...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAAGCTTTATTTTGCTCTaGGAATGTCAGGGGATAATC +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSASFILL*ECQGII
Trigger: GATTATCCCCTGACATTCCAAGAGCAAAATAAAGCT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCAACTGATTTACTGCTGTaGACTCTGGTTTCTCAAATG +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSATDLLL*TLVSQM
Trigger: CATTTGAGAAACCAGAGTCAACAGCAGTAAATCAGT...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAACTCATAGGTGGAAATaGAACAATGAGAACACATGG +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASETHRWK*NNENTW
Trigger: CCATGTGTTCTCATTGTTCAATTTCCACCTATGAGT...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ATGCCACAGGGATACGGGACCCACACAGAGTCAGTTTTCCACACGGCTTCAGAATGCACACCACAAAACTaGGAAATCAAGACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: MPQGYGTHTESVFHTASECTPQN*EIKTGN
Trigger: ATTTCCAGTCTTGATTTCCAAGTTTTGTGGTGTGCA...TTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGGTCCCGTATCCCTGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAACTCCCACCTGTCCTaGAGTCCAGGTGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYNSHLS*SPGAGA
Trigger: GGCCCCAGCACCTGGACTCAAGGACAGGTGGGAGTT...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS-3UTR CAA 90 bp ACCTTCAGCTCCTCTTCTTCCTCATGGCCCCACCGGACCTTACAAACATCAGCACAAGTTGGTACAAGTTaGAGTAAGAATTACCTGGAG +
Preference number: 5 (lower is better)
Translates to: TFSSSSSSWPHRTLQTSAQVGTS*SKNYLE
Trigger: CTCCAGGTAATTCTTACTCAAACTTGTACCAACTTG...TGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAGCTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398938.7
CDS TCA 90 bp GGAGCACAAGCAATAAAAAGGAGTTCCAAGAAAATTGTCACGGCATaGACTGAATGGACTCATACTGGGCCAGCACTTTCGGTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GAQAIKRSSKKIVTA*TEWTHTGPALSVLA
Trigger: TGCCAAGACCGAAAGTGCTGGCCCAGTATGAGTCCATTCAGTTCATGCCGTGACAATTTTCTTGGAACTCCTTTTTATTGCTTGTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTGCAGGGGGTATGATTaGAAATGGGCTCACCGGGTT +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRICRGYD*KWAHRV
Trigger: AACCCGGTGAGCCCATTTCAAATCATACCCCCTGCA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAATTGGGTCTGGCGATTTaGGCCAGGAAGGTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKLGLAI*ARKVPV
Trigger: CACCGGAACCTTCCTGGCCAAAATCGCCAGACCCAA...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATTTGACAGTGGCTTGGTaGAGGAGAATCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDLTVAW*RRIRSP
Trigger: GGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAA...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGAGTCCACGTGGAATTaGACAGTGGCTTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIESTWN*TVAWLR
Trigger: CCTCAACCAAGCCACTGTCAAATTCCACGTGGACTC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCGAGTCCACGTGGAATTaGACAGTGGCTTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGESTWN*TVAWLR
Trigger: CCTCAACCAAGCCACTGTCAAATTCCACGTGGACTC...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTGTACTTCTCCTCGAGTaGCTGTTTCTCAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIVLLLE*LFLRIC
Trigger: GCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTAC...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGGTGAGCACTATTTTATaGCTGAATAAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAVSTIL*LNKTWL
Trigger: AAGCCACGTCTTATTCAGCAATAAAATAGTGCTCAC...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGCCTCCAATCACCTTCTaGGAAGCTCTTTACTCTTCT +
Preference number: 5 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLPPITF*EALYSS
Trigger: AGAAGAGTAAAGAGCTTCCAAGAAGGTGATTGGAGG...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS GCA 90 bp TCCTCTCATGCTGATCATGACCTGCCAACCAATTTGTGTCTTGACTaGTCCATTCTCAAGCTGACTTCCAAGATCACACATCATTCTCAG +
Preference number: 5 (lower is better)
Translates to: SSHADHDLPTNLCLD*SILKLTSKITHHSQ
Trigger: CTGAGAATGATGTGTGATCTTGGAAGTCAGCTTGAGAATGGAGCAGTCAAGACACAAATTGGTTGGCAGGTCATGATCAGCATGAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CCA 90 bp AGACAGATGAGGCTTCATGGAGTGAAAAGCTTTAAGCACCTTTTATaGATTCACACAGAGCTCTCTGAAGGATGGGCAATGCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: RQMRLHGVKSFKHLL*IHTELSEGWAMHLL
Trigger: GAGAAGGTGCATTGCCCATCCTTCAGAGAGCTCTGTGTGAATCCATAAAAGGTGCTTAAAGCTTTTCACTCCATGAAGCCTCATCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000472602.1
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000551422.5
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTTGTCAATTCTCACGTaGCTGTGCCCACTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRILSILT*LCPLLD
Trigger: GTCCAAGAGTGGGCACAGCAACGTGAGAATTGACAA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTTTGGGTCTGGCGATTTaGGCCAGGAAGGTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPILGLAI*ARKVPV
Trigger: CACCGGAACCTTCCTGGCCAAAATCGCCAGACCCAA...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGTCTCAGCCCGCTTTTaGGGTCTGGCGATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYVSARF*GLAILA
Trigger: GGCCAAAATCGCCAGACCCAAAAAGCGGGCTGAGAC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCGAATTTGACAGTGGCTaGGTTGAGGAGAATCCGCTC +
Preference number: 5 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGEFDSG*VEENPL
Trigger: GAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTC...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGAGTCCACGTGGAATTaGACAGTGGCTTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRESTWN*TVAWLR
Trigger: CCTCAACCAAGCCACTGTCAAATTCCACGTGGACTC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTATGTCCGTGCAGTTTTaGAGAGTGCGTCTACACATT +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIMSVQF*RVRLHI
Trigger: AATGTGTAGACGCACTCTCAAAAACTGCACGGACAT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGCTTCAGAAAGTTGCTTaGAGAACACTGTCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: HRTLQTSASENISCIVRQLQKVA*RTLSRA
Trigger: TGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAG...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CTGATGACTACCATGATTATGCTTGAAGAGCCAGGGCCTGTGCAAGTGTGTGCGCAAGCATGTATGATGTaGAAAAGAAATTGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: LMTTMIMLEEPGPVQVCAQACMM*KRNWVQ
Trigger: TTGCACCCAATTTCTTTTCAACATCATACATGCTTG...CGCACACACTTGCACAGGCCCTGGCTCTTCAAGCATAATCATGGTAGTCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS TCA 90 bp ATGACCTGCCAACCAATTTGTGTCTTGACTGCTCCATTCTCAAGCTaGCTTCCAAGATCACACATCATTCTCAGTCCACAAACAAGCCTT +
Preference number: 5 (lower is better)
Translates to: MTCQPICVLTAPFSS*LPRSHIILSPQTSL
Trigger: AAGGCTTGTTTGTGGACTGAGAATGATGTGTGATCTTGGAAGTCAGCTTGAGAATGGAGCAGTCAAGACACAAATTGGTTGGCAGGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS TCA 90 bp ACAAGCAATAAAAAGGAGTTCCAAGAAAATTGTCACGGCATGAACTaGATGGACTCATACTGGGCCAGCACTTTCGGTCTTGGCATGAAC +
Preference number: 5 (lower is better)
Translates to: TSNKKEFQENCHGMN*MDSYWASTFGLGMN
Trigger: GTTCATGCCAAGACCGAAAGTGCTGGCCCAGTATGAGTCCATTCAGTTCATGCCGTGACAATTTTCTTGGAACTCCTTTTTATTGCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CCA 90 bp TCACCACTTAAAAGTTATCTGCAAAGACTGAAGAGTGCAGACTCCTaGCTGGATGGGAAGTTATGTCAAGTCAGAGAAATGCTCAGTCCA +
Preference number: 5 (lower is better)
Translates to: SPLKSYLQRLKSADS*LDGKLCQVREMLSP
Trigger: TGGACTGAGCATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGATAACTTTTAAGTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGATTGTCAATTCTCACGTaGCTGTGCCCACTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRLSILT*LCPLLD
Trigger: GTCCAAGAGTGGGCACAGCAACGTGAGAATTGACAA...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAGAATTTGACAGTGGCTaGGTTGAGGAGAATCCGCTC +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHREFDSG*VEENPL
Trigger: GAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTC...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGACATATTTTCCATTTTaGGAGAGAGATACCACAGGC +
Preference number: 5 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLTYFPF*ERDTTG
Trigger: GCCTGTGGTATCTCTCTCCAAAAATGGAAAATATGT...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATACATATTTTCCATTTTaGGAGAGAGATACCACAGGC +
Preference number: 5 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHTYFPF*ERDTTG
Trigger: GCCTGTGGTATCTCTCTCCAAAAATGGAAAATATGT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGTACTTCTCCTCGAGTaGCTGTTTCTCAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIVLLLE*LFLRIC
Trigger: GCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTAC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CCCACACAGAGTCAGTTTTCCACACGGCTTCAGAAAGTTGCTTTGAGAACACTGCCCTGTGATCAGACATaGCTCTGTTGTAATAAAAGT +
Preference number: 5 (lower is better)
Translates to: PTQSQFSTRLQKVALRTLPCDQT*LCCNKS
Trigger: ACTTTTATTACAACAGAGCAATGTCTGATCACAGGG...CAGTGTTCTCAAAGCAACTTTCTGAAGCCGTGTGGAAAACTGACTCTGTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATATGTCCGTGCAGTTTTaGAGAGTGCGTCTACACATT +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDMSVQF*RVRLHI
Trigger: AATGTGTAGACGCACTCTCAAAAACTGCACGGACAT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATCTTTCGAACTTTCATTaGTACACAAATCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHLSNFH*YTNHLG
Trigger: CCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAG...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCTTCAGAAAGTTGCTTaGAGAACACTGTCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDLQKVA*RTLSRA
Trigger: TGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGLKSFI*LLECQG
Trigger: CCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTATCAGTTCTGTCCTTaGACTTCCACCATCCTTTCT +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAIYQFCP*TSTILS
Trigger: AGAAAGGATGGTGGAAGTCAAAGGACAGAACTGATA...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ACATTACTAATAAGCTCTCGGATGGTGCTGATGTGGCGGGTCTGTGAACCACATATCATGTGGCAAGGGTaGCTAACCAAACAAAACTTA +
Preference number: 5 (lower is better)
Translates to: TLLISSRMVLMWRVCEPHIMWQG*LTKQNL
Trigger: TAAGTTTTGTTTGGTTAGCAACCCTTGCCACATGAT...ATGTGGTTCACAGACCCGCCACATCAGCACCATCCGAGAGCTTATTAGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTAGTGTGATCAAGATTTaGGTAAGTACACACTGCCAG +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAISVIKI*VSTHCQ
Trigger: CTGGCAGTGTGTACTTACCAAAATCTTGATCACACT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CACCGGACCTTACAAACATCAGCATCTGAGAACATTTCCTGTATTGTCAGGCAGAATAGTAGCTCAGCCTaGAGAAACACAAACCACCAT +
Preference number: 5 (lower is better)
Translates to: HRTLQTSASENISCIVRQNSSSA*RNTNHH
Trigger: ATGGTGGTTTGTGTTTCTCAAGGCTGAGCTACTATT...CTGCCTGACAATACAGGAAATGTTCTCAGATGCTGATGTTTGTAAGGTCCGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCCATTTTCTCCCTTTCTaGGTTAACTCCCACCTGTCC +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIHFLPF*VNSHLS
Trigger: GGACAGGTGGGAGTTAACCAAGAAAGGGAGAAAATG...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398930.5
ENST00000398932.5
CDS TCA 90 bp TTCTTCATTTTCTCCCTTTCTTGGTTAACTCCCACCTTTTGTAGGTaGGAAACTAAGAAGTTGAATCACTTGTGGAGGATCCCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: FFIFSLSWLTPTFCR*ETKKLNHLWRIPQP
Trigger: GGGCTGAGGGATCCTCCACAAGTGATTCAACTTCTTAGTTTCTCACCTACAAAAGGTGGGAGTTAACCAAGAAAGGGAGAAAATGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443341.5
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATTATATGCCATCCACTTaGTCAATTCTCACGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDYMPST*SILTLL
Trigger: CAGCAACGTGAGAATTGACAAAGTGGATGGCATATA...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATATATGCCATCCACTTaGTCAATTCTCACGTTGCTG +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGYMPST*SILTLL
Trigger: CAGCAACGTGAGAATTGACAAAGTGGATGGCATATA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATGAATTTGACAGTGGCTaGGTTGAGGAGAATCCGCTC +
Preference number: 5 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDEFDSG*VEENPL
Trigger: GAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTC...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAGAATTTGACAGTGGCTaGGTTGAGGAGAATCCGCTC +
Preference number: 5 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKEFDSG*VEENPL
Trigger: GAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTC...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCATGTCCGTGCAGTTTTaGAGAGTGCGTCTACACATT +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIMSVQF*RVRLHI
Trigger: AATGTGTAGACGCACTCTCAAAAACTGCACGGACAT...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTCTTTCGAACTTTCATTaGTACACAAATCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAILSNFH*YTNHLG
Trigger: CCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAG...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCTCTTGGAATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTAGCTTTATTTTGCTCTaGGAATGTCAGGGGATAATC +
Preference number: 5 (lower is better)
Translates to: ALGMSGDNPMQFLYGQAISFILL*ECQGII
Trigger: GATTATCCCCTGACATTCCAAGAGCAAAATAAAGCT...AATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACATTCCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACCTCTCGTTCATGGATaGAGGGCATTCTTTAAACTT +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGPLVHG*RAFFKL
Trigger: AAGTTTAAAGAATGCCCTCAATCCATGAACGAGAGG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCCTCTCGTTCATGGATaGAGGGCATTCTTTAAACTT +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDPLVHG*RAFFKL
Trigger: AAGTTTAAAGAATGCCCTCAATCCATGAACGAGAGG...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAATCTGGACACTCTGCGTaGTGTTGTAATTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKSGHSA*CCNFPR
Trigger: CCTGGGGAAATTACAACACAACGCAGAGTGTCCAGA...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATCATTAAGTAGCATTTaGGAGTCCGTCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGSLSSI*ESVLLE
Trigger: TTCCAGAAGGACGGACTCCAAAATGCTACTTAATGA...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS GCA 90 bp ATGGGAAGTTATGTCAAGTCAGAGAAATGCTCAGTCCAGACAGGTTaGCTTGGGAAAGATAGGTGTTTAGGGTTCCTCAAAATGAAGAAA +
Preference number: 5 (lower is better)
Translates to: MGSYVKSEKCSVQTG*LGKDRCLGFLKMKK
Trigger: TTTCTTCATTTTGAGGAACCCTAAACACCTATCTTTCCCAAGGCAACCTGTCTGGACTGAGCATTTCTCTGACTTGACATAACTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000417042.5
ENST00000443341.5
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000612702.4
ENST00000613499.4
CDS CCA 90 bp AGTCAGTGCATTATTTTATTAAAAATCACAGTGCCAAGGATAGCCTaGAAGCAGGATAGAGATTCCTCTCATGCTGATCATGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: SQCIILLKITVPRIA*KQDRDSSHADHDLP
Trigger: TGGCAGGTCATGATCAGCATGAGAGGAATCTCTATCCTGCTTCCAGGCTATCCTTGGCACTGTGATTTTTAATAAAATAATGCACTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACTTGTCAATTCTCACGTaGCTGTGCCCACTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYLSILT*LCPLLD
Trigger: GTCCAAGAGTGGGCACAGCAACGTGAGAATTGACAA...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTATATGCCATCCACTTaGTCAATTCTCACGTTGCTG +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIYMPST*SILTLL
Trigger: CAGCAACGTGAGAATTGACAAAGTGGATGGCATATA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATACATATTTTCCATTTTaGGAGAGAGATACCACAGGC +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDTYFPF*ERDTTG
Trigger: GCCTGTGGTATCTCTCTCCAAAAATGGAAAATATGT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACCCTGTGATCAGACATaGCTCTGTTGTAATAAAAGT +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGPCDQT*LCCNKS
Trigger: ACTTTTATTACAACAGAGCAATGTCTGATCACAGGG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGACTTTCGAACTTTCATTaGTACACAAATCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: FVFEGSSDVETACRVKPGLSNFH*YTNHLG
Trigger: CCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAG...TCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGACTTCAGAAAGTTGCTTaGAGAACACTGTCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRLQKVA*RTLSRA
Trigger: TGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAG...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATAGCTTTATTTTGCTCTaGGAATGTCAGGGGATAATC +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDSFILL*ECQGII
Trigger: GATTATCCCCTGACATTCCAAGAGCAAAATAAAGCT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGACTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRLKSFI*LLECQG
Trigger: CCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAG...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATAGCTGGGCATATATATaGAAGACTCAAATAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDSWAYI*KTQIRE
Trigger: CTCCCTTATTTGAGTCTTCAATATATATGCCCAGCT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTGCAGGGTTAAACCTGGATATCAACCGCCTTCTCTaGGTCTTCTATTTTTACACA +
Preference number: 5 (lower is better)
Translates to: LCLKGVLMWKQLAGLNLDINRLL*VFYFYT
Trigger: TGTGTAAAAATAGAAGACCAAGAGAAGGCGGTTGAT...ATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTATCAGTTCTGTCCTTaGACTTCCACCATCCTTTCT +
Preference number: 5 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGYQFCP*TSTILS
Trigger: AGAAAGGATGGTGGAAGTCAAAGGACAGAACTGATA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TTCAAAAGCCTTTTTGGGTCAGGAATACTCCACTACTTTGGCTCCTCCTTAGTTAGTGTGATCAAGATTTaGGTAAGTACACACTGCCAG +
Preference number: 5 (lower is better)
Translates to: FKSLFGSGILHYFGSSLVSVIKI*VSTHCQ
Trigger: CTGGCAGTGTGTACTTACCAAAATCTTGATCACACT...AACTAAGGAGGAGCCAAAGTAGTGGAGTATTCCTGACCCAAAAAGGCTTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS TCA 90 bp CTGACTTCCAAGATCACACATCATTCTCAGTCCACAAACAAGCCTTaGTATCACCTTTCTTTAAAAGGTCTCTCCCCAGATTCTACATCA +
Preference number: 5 (lower is better)
Translates to: LTSKITHHSQSTNKP*YHLSLKGLSPDSTS
Trigger: TGATGTAGAATCTGGGGAGAGACCTTTTAAAGAAAGGTGATATCAAGGCTTGTTTGTGGACTGAGAATGATGTGTGATCTTGGAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS-3UTR CAA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGACATATTTTCCATTTTaGGAGAGAGATACCACAGGC +
Preference number: 5 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMTYFPF*ERDTTG
Trigger: GCCTGTGGTATCTCTCTCCAAAAATGGAAAATATGT...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGTACTTCTCCTCGAGTaGCTGTTTCTCAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYVLLLE*LFLRIC
Trigger: GCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTAC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCCCCTGTGATCAGACATaGCTCTGTTGTAATAAAAGT +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIPCDQT*LCCNKS
Trigger: ACTTTTATTACAACAGAGCAATGTCTGATCACAGGG...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCCCTGTGATCAGACATaGCTCTGTTGTAATAAAAGT +
Preference number: 5 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGPCDQT*LCCNKS
Trigger: ACTTTTATTACAACAGAGCAATGTCTGATCACAGGG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTG +
Preference number: 5 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGFSQQS*CLKGVL
Trigger: CAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAA...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCTTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTG +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIFSQQS*CLKGVL
Trigger: CAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAA...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCCTTTCGAACTTTCATTaGTACACAAATCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRILSNFH*YTNHLG
Trigger: CCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAG...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTGCACACCACAAAACTaGGAAATCAAGACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: LNDELMGAAHQHGTCIHMCTPQN*EIKTGN
Trigger: ATTTCCAGTCTTGATTTCCAAGTTTTGTGGTGTGCA...CATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCTGGGACATGAGAATCGACCTTAGACTACACTaGGAAAACCACGATTTATAC +
Preference number: 5 (lower is better)
Translates to: FLLRYRPQFCKSGWDMRIDLRLH*ENHDLY
Trigger: GTATAAATCGTGGTTTTCCAAGTGTAGTCTAAGGTC...GATTCTCATGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613499.4
CDS-3UTR CAA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGGTACTTCTCCTCGAGTaGCTGTTTCTCAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLVLLLE*LFLRIC
Trigger: GCAGATTCTGAGAAACAGCAACTCGAGGAGAAGTAC...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTCCCTGTGATCAGACATaGCTCTGTTGTAATAAAAGT +
Preference number: 5 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIPCDQT*LCCNKS
Trigger: ACTTTTATTACAACAGAGCAATGTCTGATCACAGGG...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTTTTTCACAGCAATCTTaGTGTTTGAAGGGAGTTCTG +
Preference number: 5 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIFSQQS*CLKGVL
Trigger: CAGAACTCCCTTCAAACACAAAGATTGCTGTGAAAA...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACCTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYLKSFI*LLECQG
Trigger: CCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAG...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTCAAGAGCTTTATTTaGCTCTTGGAATGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPILKSFI*LLECQG
Trigger: CCCCTGACATTCCAAGAGCAAAATAAAGCTCTTGAG...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTACTGATTTACTGCTGTaGACTCTGGTTTCTCAAATG +
Preference number: 5 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLITDLLL*TLVSQM
Trigger: CATTTGAGAAACCAGAGTCAACAGCAGTAAATCAGT...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp GCATTTTGGAGTCCGTCCTTCTGGAATGGAGATTCTGTTTACAAAAGCCTTATTGTGAGCACTATTTTATaGCTGAATAAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: AFWSPSFWNGDSVYKSLIVSTIL*LNKTWL
Trigger: AAGCCACGTCTTATTCAGCAATAAAATAGTGCTCAC...AATAAGGCTTTTGTAAACAGAATCTCCATTCCAGAAGGACGGACTCCAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTCTGTAAGTCTGGCCAAGCATGTATGATGTaGAAAAGAAATTGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: TNHLGFLLRYRPQFCKSGQACMM*KRNWVQ
Trigger: TTGCACCCAATTTCTTTTCAACATCATACATGCTTG...GCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TATGAGAGTTCACTTTCAGACGAAGCACCTAACAGGAAATCTCTCAAACACAGAATCATGTGGCAAGGGTaGCTAACCAAACAAAACTTA +
Preference number: 5 (lower is better)
Translates to: YESSLSDEAPNRKSLKHRIMWQG*LTKQNL
Trigger: TAAGTTTTGTTTGGTTAGCAACCCTTGCCACATGAT...TCTGTGTTTGAGAGATTTCCTGTTAGGTGCTTCGTCTGAAAGTGAACTCTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACTATATGCCATCCACTTaGTCAATTCTCACGTTGCTG +
Preference number: 5 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYYMPST*SILTLL
Trigger: CAGCAACGTGAGAATTGACAAAGTGGATGGCATATA...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAACATATTTTCCATTTTaGGAGAGAGATACCACAGGC +
Preference number: 5 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKTYFPF*ERDTTG
Trigger: GCCTGTGGTATCTCTCTCCAAAAATGGAAAATATGT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTACTTCAGAAAGTTGCTTaGAGAACACTGTCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLLQKVA*RTLSRA
Trigger: TGCTCTGGACAGTGTTCTCAAAGCAACTTTCTGAAG...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CAGGAAATCTCTCAAACACAGAAATGCTGGTTTAGCCACAAGATCAAAGGAAAAAGCTTTATTTTGCTCTaGGAATGTCAGGGGATAATC +
Preference number: 5 (lower is better)
Translates to: QEISQTQKCWFSHKIKGKSFILL*ECQGII
Trigger: GATTATCCCCTGACATTCCAAGAGCAAAATAAAGCT...TTTTCCTTTGATCTTGTGGCTAAACCAGCATTTCTGTGTTTGAGAGATTTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATAGCTTTATTTTGCTCTaGGAATGTCAGGGGATAATC +
Preference number: 5 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDSFILL*ECQGII
Trigger: GATTATCCCCTGACATTCCAAGAGCAAAATAAAGCT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS-3UTR CAA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATACTCATAGGTGGAAATaGAACAATGAGAACACATGG +
Preference number: 5 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDTHRWK*NNENTW
Trigger: CCATGTGTTCTCATTGTTCAATTTCCACCTATGAGT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp ATGTCAGGGGATAATCCTATGCAGTTCCTTTATGGGCAAGCCATTTTAATAGATATCAACCGCCTTCTCTaGGTCTTCTATTTTTACACA +
Preference number: 5 (lower is better)
Translates to: MSGDNPMQFLYGQAILIDINRLL*VFYFYT
Trigger: TGTGTAAAAATAGAAGACCAAGAGAAGGCGGTTGAT...ATCTATTAAAATGGCTTGCCCATAAAGGAACTGCATAGGATTATCCCCTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TCTATATATAGCAAGAGACCTAAGTGTGATCAAGATTTTGGTAAGTACACACTGTATATGCCATCCACTTaGTCAATTCTCACGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SIYSKRPKCDQDFGKYTLYMPST*SILTLL
Trigger: CAGCAACGTGAGAATTGACAAAGTGGATGGCATATA...CAGTGTGTACTTACCAAAATCTTGATCACACTTAGGTCTCTTGCTATATATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp TGTGAATCTGTTTCAAGCAGAAGACCGACCAGATATAATAAATTAAGTTGGCTAAGGACATTATTCCAATaGCCCTACACCAAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: CESVSSRRPTRYNKLSWLRTLFQ*PYTKLL
Trigger: TAAGAGCTTGGTGTAGGGCAATTGGAATAATGTCCT...TAGCCAACTTAATTTATTATATCTGGTCGGTCTTCTGCTTGAAACAGATTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACAGACCCCAATTAGAAATGGGCATAGTTaGGGATTATGTGAACACTCT +
Preference number: 5 (lower is better)
Translates to: LSFVHKSSGVLVKIQTPIRNGHS*GLCEHS
Trigger: AGAGTGTTCACATAATCCCAAACTATGCCCATTTCT...AATTGGGGTCTGTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS-3UTR CAA 90 bp CAGCTTTCGAACTTTCATTTGTACACAAATCATCTGGGGTTCTTGTTAAGATACGCAAGGACATATATCTaGCAACACTGTATAAGGATC +
Preference number: 5 (lower is better)
Translates to: QLSNFHLYTNHLGFLLRYARTYI*QHCIRI
Trigger: GATCCTTATACAGTGTTGCAAGATATATGTCCTTGC...GTATCTTAACAAGAACCCCAGATGATTTGTGTACAAATGAAAGTTCGAAAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328656.8
ENST00000398938.7
CDS TCA 72 bp AACCCACACCTGCAGGCTACGTGCTCCTGTGCTGGCTaGGCCGGTAGGCAGGAACACACTCTCCACCCCAGC +
Preference number: 6 (lower is better)
Translates to: NPHLQATCSCAG*AGRQEHTLHPS
Trigger: GCTGGGGTGGAGAGTGTGTTCCTGCCTACCGGCTCAGCCAGCACAGGAGCACGTAGCCTGCAGGTGTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398932.5
ENST00000438657.5
CDS GCA 72 bp GACTCAGCAGGGGGAAGCCTGTGTACAACCCACACCTaGAGGCTACGTGCTCCTGTGCTGGCTGAGCCGGTA +
Preference number: 6 (lower is better)
Translates to: DSAGGSLCTTHT*RLRAPVLAEPV
Trigger: TACCGGCTCAGCCAGCACAGGAGCACGTAGCCTGCAGGTGTGGGTTGTACACAGGCTTCCCCCTGCTGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398932.5
ENST00000438657.5
CDS CCA 72 bp AGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCCGGCACACGG +
Preference number: 6 (lower is better)
Translates to: RQVERPRSPSPT*LPWDSATAGTR
Trigger: CCGTGTGCCGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398927.1
CDS CAA 72 bp TTGCTGTGCCCACTCTTGGACATGACGCGGGGTCTGTaGGCCTTGAGCCCAGCCCCAGCAGTGTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: LLCPLLDMTRGL*ALSPAPAVCFT
Trigger: GGTGAAGCACACTGCTGGGGCTGGGCTCAAGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000328656.8
ENST00000398925.5
ENST00000398927.1
ENST00000398928.5
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000419868.1
ENST00000438657.5
ENST00000443341.5
ENST00000547341.5
ENST00000547595.5
ENST00000548700.5
ENST00000549805.5
ENST00000549932.5
ENST00000551422.5
ENST00000612702.4
ENST00000613499.4
CDS CAA 72 bp ACAGTGGCTTGGTTGAGGAGAATCCGCTCCCCCTCCTaGGTGACGTGGGTCTGCAGGAGCTTGCCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: TVAWLRRIRSPS*VTWVCRSLPES
Trigger: GCTCTCTGGCAAGCTCCTGCAGACCCACGTCACCAAGGAGGGGGAGCGGATTCTCCTCAACCAAGCCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000438657.5
ENST00000612702.4
ENST00000613499.4
CDS CAA 90 bp GGGCTCTCAGAGGAGGAGTCCACGTGGAATTTGACAGTGGCTTGGTaGAGGAGAATCCGCTCCCCCTCCTTGGTGACGTGGGTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: GLSEEESTWNLTVAW*RRIRSPSLVTWVCR
Trigger: CCTGCAGACCCACGTCACCAAGGAGGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTCTGAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS CAA 90 bp GAAGGGGCTCTCAGAGGAGGAGTCCACGTGGAATTTGACAGTGGCTaGGTTGAGGAGAATCCGCTCCCCCTCCTTGGTGACGTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: EGALRGGVHVEFDSG*VEENPLPLLGDVGL
Trigger: CAGACCCACGTCACCAAGGAGGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTCTGAGAGCCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS GCA 72 bp GGGGGTGCTGGACATGCCGATGTGAATGGCATCCATTaGCAGGCTCTGGAAACATCCGCAGGTCAGGTGTCT +
Preference number: 6 (lower is better)
Translates to: GGAGHADVNGIH*QALETSAGQVS
Trigger: AGACACCTGACCTGCGGATGTTTCCAGAGCCTGGCAATGGATGCCATTCACATCGGCATGTCCAGCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419868.1
CDS CCA 72 bp AGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCCTGCAAAGAC +
Preference number: 6 (lower is better)
Translates to: RQVERPRSPSPT*LPWDSATACKD
Trigger: GTCTTTGCAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398928.5
ENST00000398938.7
ENST00000612702.4
CDS CCA 72 bp AGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCCTTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: RQVERPRSPSPT*LPWDSATALSP
Trigger: TGGACTCAAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398934.5
ENST00000438657.5
CDS CAA 72 bp GAGGAGGAGTCCACGTGGAATTTGACAGTGGCTTGGTaGAGGAGAATCCGCTCCCCCTCCTTGGTGACGTGG +
Preference number: 6 (lower is better)
Translates to: EEESTWNLTVAW*RRIRSPSLVTW
Trigger: CCACGTCACCAAGGAGGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000438657.5
ENST00000612702.4
ENST00000613499.4
CDS CCA 72 bp CCTTCCTCTGAAGACGCTGCTTGGTCATTACCTCACTaGGCTGGGAATCCAGCAATCCCACAGGGAGGCATG +
Preference number: 6 (lower is better)
Translates to: PSSEDAAWSLPH*AGNPAIPQGGM
Trigger: CATGCCTCCCTGTGGGATTGCTGGATTCCCAGCCCAGTGAGGTAATGACCAAGCAGCGTCTTCAGAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CCA 72 bp AGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCCTTCTCATTG +
Preference number: 6 (lower is better)
Translates to: RQVERPRSPSPT*LPWDSATAFSL
Trigger: CAATGAGAAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547595.5
ENST00000548700.5
CDS CAA 72 bp CTCAGAGGAGGAGTCCACGTGGAATTTGACAGTGGCTaGGTTGAGGAGAATCCGCTCCCCCTCCTTGGTGAC +
Preference number: 6 (lower is better)
Translates to: LRGGVHVEFDSG*VEENPLPLLGD
Trigger: GTCACCAAGGAGGGGGAGCGGATTCTCCTCAACCAAGCCACTGTCAAATTCCACGTGGACTCCTCCTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000438657.5
ENST00000612702.4
ENST00000613499.4
CDS CAA 90 bp TATATGCCATCCACTTTGTCAATTCTCACGTTGCTGTGCCCACTCTaGGACATGACGCGGGGTCTGTTGGCCTTGAGCCCAGCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: YMPSTLSILTLLCPL*DMTRGLLALSPAPA
Trigger: TGCTGGGGCTGGGCTCAAGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACAAAGTGGATGGCATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000328656.8
ENST00000398925.5
ENST00000398927.1
ENST00000398928.5
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000419868.1
ENST00000438657.5
ENST00000547341.5
ENST00000547595.5
ENST00000548700.5
ENST00000549805.5
ENST00000549932.5
ENST00000551422.5
ENST00000612702.4
ENST00000613499.4
CDS GCA 72 bp CCCTTCACCCACCTGGCTACCATGGGATTCTGCTACTaGCTCAGAATTTCCGATTCAGCAGGTTTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: PFTHLATMGFCY*LRISDSAGLGC
Trigger: GCACCCCAAACCTGCTGAATCGGAAATTCTGAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS CCA 72 bp ACCATGGGATTCTGCTACTGCCTTGAGTCCAGGTGCTaGGGCCCAATCTCAGCTGAAGATCCCAGAGATCTG +
Preference number: 6 (lower is better)
Translates to: TMGFCYCLESRC*GPISAEDPRDL
Trigger: CAGATCTCTGGGATCTTCAGCTGAGATTGGGCCCCAGCACCTGGACTCAAGGCAGTAGCAGAATCCCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398934.5
ENST00000438657.5
CDS CCA 72 bp AGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCCTCAGAATTT +
Preference number: 6 (lower is better)
Translates to: RQVERPRSPSPT*LPWDSATASEF
Trigger: AAATTCTGAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS CAA 72 bp TCCACTTTGTCAATTCTCACGTTGCTGTGCCCACTCTaGGACATGACGCGGGGTCTGTTGGCCTTGAGCCCA +
Preference number: 6 (lower is better)
Translates to: STLSILTLLCPL*DMTRGLLALSP
Trigger: TGGGCTCAAGGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACAAAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000328656.8
ENST00000398925.5
ENST00000398927.1
ENST00000398928.5
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000419868.1
ENST00000438657.5
ENST00000547341.5
ENST00000547595.5
ENST00000548700.5
ENST00000549805.5
ENST00000549932.5
ENST00000551422.5
ENST00000612702.4
ENST00000613499.4
CDS TCA 72 bp AACCTTTCCTTCACCAGCTGCCTTAGGGACAAGCCTTaGGCTCAGCCTGGTCTAACAGCATCTCCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: NLSFTSCLRDKP*AQPGLTASPQG
Trigger: TCCCTGAGGAGATGCTGTTAGACCAGGCTGAGCTCAAGGCTTGTCCCTAAGGCAGCTGGTGAAGGAAAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443341.5
CDS GCA 72 bp TCGCTCCCCTTCACCCACCTGGCTACCATGGGATTCTaGTACTGCCTCAGAATTTCCGATTCAGCAGGTTTG +
Preference number: 6 (lower is better)
Translates to: SLPFTHLATMGF*YCLRISDSAGL
Trigger: CAAACCTGCTGAATCGGAAATTCTGAGGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS CCA 72 bp AGGACCACAAGCTCAAACTCCTTCTCCTTTAGGTTTTaGGGTGTGAGGTCTCTCAGGGGGCTCGTCTCATCC +
Preference number: 6 (lower is better)
Translates to: RTTSSNSFSFRF*GVRSLRGLVSS
Trigger: GGATGAGACGAGCCCCCTGAGAGACCTCACACCCCAAAACCTAAAGGAGAAGGAGTTTGAGCTTGTGGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS CCA 72 bp GCTGGGGCCCAATCTCAGCTGAAGATCCCAGAGATCTaGGGAAGTGATGAAGAGATCTGGGGAACTGACTCA +
Preference number: 6 (lower is better)
Translates to: AGAQSQLKIPEI*GSDEEIWGTDS
Trigger: TGAGTCAGTTCCCCAGATCTCTTCATCACTTCCCCAGATCTCTGGGATCTTCAGCTGAGATTGGGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000438657.5
CDS CCA 72 bp AGGCAGGTAGAACGTCCTCGCTCCCCTTCACCCACCTaGCTACCATGGGATTCTGCTACTGCATTTATTGCT +
Preference number: 6 (lower is better)
Translates to: RQVERPRSPSPT*LPWDSATAFIA
Trigger: AGCAATAAATGCAGTAGCAGAATCCCATGGTAGCCAGGTGGGTGAAGGGGAGCGAGGACGTTCTACCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551422.5
CDS CAA 72 bp CTCTGGCAGACAGCGCTGGTGGATTCCACAGTGGCATaGAGGAGGACCACAAGCTCAAACTCCTTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: LWQTALVDSTVA*RRTTSSNSFSF
Trigger: AAAGGAGAAGGAGTTTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAATCCACCAGCGCTGTCTGCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS CAA 90 bp GATGTTCGGCTCTGGCAGACAGCGCTGGTGGATTCCACAGTGGCATaGAGGAGGACCACAAGCTCAAACTCCTTCTCCTTTAGGTTTTGG +
Preference number: 6 (lower is better)
Translates to: DVRLWQTALVDSTVA*RRTTSSNSFSFRFW
Trigger: CCAAAACCTAAAGGAGAAGGAGTTTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAATCCACCAGCGCTGTCTGCCAGAGCCGAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS TCA 72 bp TCTGGCAGACAGCGCTGGTGGATTCCACAGTGGCATTaGGGAGGACCACAAGCTCAAACTCCTTCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: SGRQRWWIPQWH*GGPQAQTPSPL
Trigger: TAAAGGAGAAGGAGTTTGAGCTTGTGGTCCTCCTCAATGCCACTGTGGAATCCACCAGCGCTGTCTGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS GCA 72 bp TATATGCCATCCACTTTGTCAATTCTCACGTTGCTGTaGCCACTCTTGGACATGACGCGGGGTCTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: YMPSTLSILTLL*PLLDMTRGLLA
Trigger: GGCCAACAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACAAAGTGGATGGCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000328656.8
ENST00000398925.5
ENST00000398927.1
ENST00000398928.5
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000419868.1
ENST00000438657.5
ENST00000547341.5
ENST00000547595.5
ENST00000548700.5
ENST00000549805.5
ENST00000549932.5
ENST00000551422.5
ENST00000612702.4
ENST00000613499.4
CDS CCA 72 bp ACGCTGTACAGCTATCCTTCCTCTGAAGACGCTGCTTaGTCATTACCTCACTGGGCTGGGAATCCAGCAATC +
Preference number: 6 (lower is better)
Translates to: TLYSYPSSEDAA*SLPHWAGNPAI
Trigger: GATTGCTGGATTCCCAGCCCAGTGAGGTAATGACCAAGCAGCGTCTTCAGAGGAAGGATAGCTGTACAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CCA 72 bp CTTCCTGAGCAGCTGGGTGCCCTCTCAGCCCACATCTaGCACATGAATTCCTTCCTGAAGGTTCTTCATTTT +
Preference number: 6 (lower is better)
Translates to: LPEQLGALSAHI*HMNSFLKVLHF
Trigger: AAAATGAAGAACCTTCAGGAAGGAATTCATGTGCCAGATGTGGGCTGAGAGGGCACCCAGCTGCTCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398925.5
ENST00000398930.5
ENST00000398932.5
ENST00000417042.5
ENST00000443341.5
CDS CAA 72 bp AGTAGGTATATGCCATCCACTTTGTCAATTCTCACGTaGCTGTGCCCACTCTTGGACATGACGCGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: SRYMPSTLSILT*LCPLLDMTRGL
Trigger: CAGACCCCGCGTCATGTCCAAGAGTGGGCACAGCAACGTGAGAATTGACAAAGTGGATGGCATATACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000328656.8
ENST00000398925.5
ENST00000398927.1
ENST00000398928.5
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000419868.1
ENST00000438657.5
ENST00000612702.4
ENST00000613499.4
CDS GCA 72 bp CCTGGCTGGATGGGAAGTTATGTCAAGTCAGAGAAATaGTCAGTCCAGACAGGTTGCCTTGGGAAAGATAGG +
Preference number: 6 (lower is better)
Translates to: PGWMGSYVKSEK*SVQTGCLGKDR
Trigger: CCTATCTTTCCCAAGGCAACCTGTCTGGACTGAGCATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000328656.8
ENST00000398938.7
ENST00000417042.5
ENST00000443341.5
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000612702.4
ENST00000613499.4
CDS GCA 72 bp CTGTGGTCCACAGGTCTTGCAGGTAGAGTAGGTATATaGCATCCACTTTGTCAATTCTCACGTTGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: LWSTGLAGRVGI*HPLCQFSRCCA
Trigger: GGCACAGCAACGTGAGAATTGACAAAGTGGATGGCATATACCTACTCTACCTGCAAGACCTGTGGACCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000328656.8
ENST00000398925.5
ENST00000398927.1
ENST00000398928.5
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000419868.1
ENST00000438657.5
ENST00000612702.4
ENST00000613499.4
CDS GCA 72 bp TTTGTGTTTGAAGGGAGTTCTGATGTGGAAACAGCTTaGAGGGTTAAACCTGGATGGCGCCCCTGTGATCAG +
Preference number: 6 (lower is better)
Translates to: FVFEGSSDVETA*RVKPGWRPCDQ
Trigger: CTGATCACAGGGGCGCCATCCAGGTTTAACCCTGCAAGCTGTTTCCACATCAGAACTCCCTTCAAACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS GCA 72 bp CCTGGCTGGATGGGAAGTTATGTCAAGTCAGAGAAATaGTCAGTCCAGACAGGTTGCCAGCACAGGATTCTA +
Preference number: 6 (lower is better)
Translates to: PGWMGSYVKSEK*SVQTGCQHRIL
Trigger: TAGAATCCTGTGCTGGCAACCTGTCTGGACTGAGCATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398925.5
ENST00000398928.5
CDS CCA 72 bp CCTGCAAAGACTGAAGAGTGCAGACTCCTGGCTGGATaGGAAGTTATGTCAAGTCAGAGAAATGCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: PAKTEECRLLAG*EVMSSQRNAQS
Trigger: GGACTGAGCATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398925.5
ENST00000398928.5
ENST00000398938.7
ENST00000417042.5
ENST00000443341.5
ENST00000612702.4
CDS CCA 72 bp CACAGGCACAAACTCAAAACCCCAGTAGATTTCCTCTaGGATATAAGATGTTCGGCTCTGGCAGACAGCGCT +
Preference number: 6 (lower is better)
Translates to: HRHKLKTPVDFL*DIRCSALADSA
Trigger: AGCGCTGTCTGCCAGAGCCGAACATCTTATATCCCAGAGGAAATCTACTGGGGTTTTGAGTTTGTGCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS CCA 72 bp CCACCTGTCCTGCAAAGACTGAAGAGTGCAGACTCCTaGCTGGATGGGAAGTTATGTCAAGTCAGAGAAATG +
Preference number: 6 (lower is better)
Translates to: PPVLQRLKSADS*LDGKLCQVREM
Trigger: CATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGACAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398925.5
ENST00000417042.5
CDS CAA 90 bp GGGGCCGGAAAGGCTGTTGTTGGAAACATGGTTAAGGCCCCTCACTaGATGGATGAACCTCCAGGCATTTATTGCTTTCATGAGACAGAT +
Preference number: 6 (lower is better)
Translates to: GAGKAVVGNMVKAPH*MDEPPGIYCFHETD
Trigger: ATCTGTCTCATGAAAGCAATAAATGCCTGGAGGTTCATCCATCAAGTGAGGGGCCTTAACCATGTTTCCAACAACAGCCTTTCCGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CAA 90 bp ACCATGGGATTCTGCTACTGCCTCAGAATTTCCGATTCAGCAGGTTaGGGGTGCAGCCAGAGGGTCTGTAGTTCTGATAATTTCCCAGAT +
Preference number: 6 (lower is better)
Translates to: TMGFCYCLRISDSAG*GCSQRVCSSDNFPD
Trigger: ATCTGGGAAATTATCAGAACTACAGACCCTCTGGCTGCACCCCAAACCTGCTGAATCGGAAATTCTGAGGCAGTAGCAGAATCCCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS GCA 72 bp AAGCTGTCTGTGAGGCCCCTAGCATCTTCTAGTACCTaGCTGATGACTGACATAAATTTCCCCCACATTCCT +
Preference number: 6 (lower is better)
Translates to: KLSVRPLASSST*LMTDINFPHIP
Trigger: AGGAATGTGGGGGAAATTTATGTCAGTCATCAGGCAGGTACTAGAAGATGCTAGGGGCCTCACAGACAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417042.5
ENST00000612702.4
CDS CCA 72 bp TGCTACTGCCTGCAAAGACTGAAGAGTGCAGACTCCTaGCTGGATGGGAAGTTATGTCAAGTCAGAGAAATG +
Preference number: 6 (lower is better)
Translates to: CYCLQRLKSADS*LDGKLCQVREM
Trigger: CATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGCAGTAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328656.8
ENST00000398928.5
ENST00000398938.7
ENST00000612702.4
CDS CCA 72 bp AGAGCTGGCACTGAATCAAGAGGCTCTTCCTCATATTaGCTACCTGAATCACCAAGCACAGCTTCCCATTCT +
Preference number: 6 (lower is better)
Translates to: RAGTESRGSSSY*LPESPSTASHS
Trigger: AGAATGGGAAGCTGTGCTTGGTGATTCAGGTAGCCAATATGAGGAAGAGCCTCTTGATTCAGTGCCAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000438657.5
ENST00000612702.4
ENST00000613499.4
CDS CCA 72 bp ATCCCACAGGGAGGCATGCTTCAACGTACCATGAAATaGGCTGATGTACCAGGAGCACAAGCAATAAAAAGG +
Preference number: 6 (lower is better)
Translates to: IPQGGMLQRTMK*ADVPGAQAIKR
Trigger: CCTTTTTATTGCTTGTGCTCCTGGTACATCAGCCCATTTCATGGTACGTTGAAGCATGCCTCCCTGTGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CCA 72 bp TCTGCAAAGACTGAAGAGTGCAGACTCCTGGCTGGATaGGAAGTTATGTCAAGTCAGAGAAATGCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: SAKTEECRLLAG*EVMSSQRNAQS
Trigger: GGACTGAGCATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000613499.4
CDS CCA 72 bp TCTGCTACTGCCTCAGAATTTCCGATTCAGCAGGTTTaGGGTGCAGCCAGAGGGTCTGTAGTTCTGATAATT +
Preference number: 6 (lower is better)
Translates to: SATASEFPIQQV*GAARGSVVLII
Trigger: AATTATCAGAACTACAGACCCTCTGGCTGCACCCCAAACCTGCTGAATCGGAAATTCTGAGGCAGTAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS CAA 72 bp TTCTGCTACTGCCTCAGAATTTCCGATTCAGCAGGTTaGGGGTGCAGCCAGAGGGTCTGTAGTTCTGATAAT +
Preference number: 6 (lower is better)
Translates to: FCYCLRISDSAG*GCSQRVCSSDN
Trigger: ATTATCAGAACTACAGACCCTCTGGCTGCACCCCAAACCTGCTGAATCGGAAATTCTGAGGCAGTAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4
CDS TCA 72 bp ACAGGGAGGCATGCTTCAACGTACCATGAAATGGGCTaGTGTACCAGGAGCACAAGCAATAAAAAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: TGRHASTYHEMG*CTRSTSNKKEF
Trigger: GAACTCCTTTTTATTGCTTGTGCTCCTGGTACATCAGCCCATTTCATGGTACGTTGAAGCATGCCTCCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CCA 72 bp CAACATCTCCTGCAAAGACTGAAGAGTGCAGACTCCTaGCTGGATGGGAAGTTATGTCAAGTCAGAGAAATG +
Preference number: 6 (lower is better)
Translates to: QHLLQRLKSADS*LDGKLCQVREM
Trigger: CATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGGAGATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443341.5
CDS CAA 72 bp GATTCCTCTCATGCTGATCATGACCTGCCAACCAATTaGTGTCTTGACTGCTCCATTCTCAAGCTGACTTCC +
Preference number: 6 (lower is better)
Translates to: DSSHADHDLPTN*CLDCSILKLTS
Trigger: GGAAGTCAGCTTGAGAATGGAGCAGTCAAGACACAAATTGGTTGGCAGGTCATGATCAGCATGAGAGGAATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CAA 90 bp CAGGATAGAGATTCCTCTCATGCTGATCATGACCTGCCAACCAATTaGTGTCTTGACTGCTCCATTCTCAAGCTGACTTCCAAGATCACA +
Preference number: 6 (lower is better)
Translates to: QDRDSSHADHDLPTN*CLDCSILKLTSKIT
Trigger: TGTGATCTTGGAAGTCAGCTTGAGAATGGAGCAGTCAAGACACAAATTGGTTGGCAGGTCATGATCAGCATGAGAGGAATCTCTATCCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS TCA 72 bp AGGCTGTTGTTGGAAACATGGTTAAGGCCCCTCACTTaGTGGATGAACCTCCAGGCATTTATTGCTTTCATG +
Preference number: 6 (lower is better)
Translates to: RLLLETWLRPLT*WMNLQAFIAFM
Trigger: CATGAAAGCAATAAATGCCTGGAGGTTCATCCATCAAGTGAGGGGCCTTAACCATGTTTCCAACAACAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS GCA 72 bp GGGTTAAACCTGGATGGCGCCCCTGTGATCAGACATTaGTCTGTTGTAATAAAAGTGTCCTCAGTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: GLNLDGAPVIRH*SVVIKVSSVLF
Trigger: AAAGAGAACTGAGGACACTTTTATTACAACAGAGCAATGTCTGATCACAGGGGCGCCATCCAGGTTTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS GCA 72 bp GCTGATCATGACCTGCCAACCAATTTGTGTCTTGACTaGTCCATTCTCAAGCTGACTTCCAAGATCACACAT +
Preference number: 6 (lower is better)
Translates to: ADHDLPTNLCLD*SILKLTSKITH
Trigger: ATGTGTGATCTTGGAAGTCAGCTTGAGAATGGAGCAGTCAAGACACAAATTGGTTGGCAGGTCATGATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CAA 72 bp AGGGTTAAACCTGGATGGCGCCCCTGTGATCAGACATaGCTCTGTTGTAATAAAAGTGTCCTCAGTTCTCTT +
Preference number: 6 (lower is better)
Translates to: RVKPGWRPCDQT*LCCNKSVLSSL
Trigger: AAGAGAACTGAGGACACTTTTATTACAACAGAGCAATGTCTGATCACAGGGGCGCCATCCAGGTTTAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS TCA 72 bp AAAAAGGAGTTCCAAGAAAATTGTCACGGCATGAACTaGATGGACTCATACTGGGCCAGCACTTTCGGTCTT +
Preference number: 6 (lower is better)
Translates to: KKEFQENCHGMN*MDSYWASTFGL
Trigger: AAGACCGAAAGTGCTGGCCCAGTATGAGTCCATTCAGTTCATGCCGTGACAATTTTCTTGGAACTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS TCA 72 bp GCAATAAAAAGGAGTTCCAAGAAAATTGTCACGGCATaGACTGAATGGACTCATACTGGGCCAGCACTTTCG +
Preference number: 6 (lower is better)
Translates to: AIKRSSKKIVTA*TEWTHTGPALS
Trigger: CGAAAGTGCTGGCCCAGTATGAGTCCATTCAGTTCATGCCGTGACAATTTTCTTGGAACTCCTTTTTATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CCA 72 bp AGGCTTCATGGAGTGAAAAGCTTTAAGCACCTTTTATaGATTCACACAGAGCTCTCTGAAGGATGGGCAATG +
Preference number: 6 (lower is better)
Translates to: RLHGVKSFKHLL*IHTELSEGWAM
Trigger: CATTGCCCATCCTTCAGAGAGCTCTGTGTGAATCCATAAAAGGTGCTTAAAGCTTTTCACTCCATGAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000472602.1
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000551422.5
CDS CAA 72 bp AAGGCTGTTGTTGGAAACATGGTTAAGGCCCCTCACTaGATGGATGAACCTCCAGGCATTTATTGCTTTCAT +
Preference number: 6 (lower is better)
Translates to: KAVVGNMVKAPH*MDEPPGIYCFH
Trigger: ATGAAAGCAATAAATGCCTGGAGGTTCATCCATCAAGTGAGGGGCCTTAACCATGTTTCCAACAACAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS GCA 72 bp CGAGTTGCTGTTTCTCAGAATCTGCACAGTAAAATGTaGAATCTGGGCTTTTCCGAATCTGTTCAAACTGAC +
Preference number: 6 (lower is better)
Translates to: RVAVSQNLHSKM*NLGFSESVQTD
Trigger: GTCAGTTTGAACAGATTCGGAAAAGCCCAGATTGCACATTTTACTGTGCAGATTCTGAGAAACAGCAACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000328656.8
ENST00000398930.5
ENST00000398932.5
ENST00000398934.5
ENST00000398938.7
ENST00000612702.4
ENST00000613499.4
CDS CCA 72 bp AAAAGTTATCTGCAAAGACTGAAGAGTGCAGACTCCTaGCTGGATGGGAAGTTATGTCAAGTCAGAGAAATG +
Preference number: 6 (lower is better)
Translates to: KSYLQRLKSADS*LDGKLCQVREM
Trigger: CATTTCTCTGACTTGACATAACTTCCCATCCAGCCAGGAGTCTGCACTCTTCAGTCTTTGCAGATAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000613499.4
CDS CAA 90 bp GCTGACTTCCAAGATCACACATCATTCTCAGTCCACAAACAAGCCTaGATATCACCTTTCTTTAAAAGGTCTCTCCCCAGATTCTACATC +
Preference number: 6 (lower is better)
Translates to: ADFQDHTSFSVHKQA*ISPFFKRSLPRFYI
Trigger: GATGTAGAATCTGGGGAGAGACCTTTTAAAGAAAGGTGATATCAAGGCTTGTTTGTGGACTGAGAATGATGTGTGATCTTGGAAGTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS TCA 72 bp TTCTCCCTTTCTTGGTTAACTCCCACCTTTTGTAGGTaGGAAACTAAGAAGTTGAATCACTTGTGGAGGATC +
Preference number: 6 (lower is better)
Translates to: FSLSWLTPTFCR*ETKKLNHLWRI
Trigger: GATCCTCCACAAGTGATTCAACTTCTTAGTTTCTCACCTACAAAAGGTGGGAGTTAACCAAGAAAGGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443341.5
CDS CAA 72 bp CAAGATCACACATCATTCTCAGTCCACAAACAAGCCTaGATATCACCTTTCTTTAAAAGGTCTCTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: QDHTSFSVHKQA*ISPFFKRSLPR
Trigger: TCTGGGGAGAGACCTTTTAAAGAAAGGTGATATCAAGGCTTGTTTGTGGACTGAGAATGATGTGTGATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CAA 90 bp ACTCTCTCACTGTTCACTGTCAGTCAAAAACAAGTTGGTACAAGTTaGAGTAAGAATTACCTGGAGGAACTGAAGAGAGAAAGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: TLSLFTVSQKQVGTS*SKNYLEELKRERKE
Trigger: CTCTTTCCTTTCTCTCTTCAGTTCCTCCAGGTAATTCTTACTCAAACTTGTACCAACTTGTTTTTGACTGACAGTGAACAGTGAGAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417042.5
CDS TCA 72 bp AAGATCACACATCATTCTCAGTCCACAAACAAGCCTTaGTATCACCTTTCTTTAAAAGGTCTCTCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: KITHHSQSTNKP*YHLSLKGLSPD
Trigger: ATCTGGGGAGAGACCTTTTAAAGAAAGGTGATATCAAGGCTTGTTTGTGGACTGAGAATGATGTGTGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472602.1
CDS CAA 72 bp CAGATATCCCCGATGCTGTTAGACCTTAGACTACACTaGGAAAACCACGATTTATACTCTTCACCACTTAAA +
Preference number: 6 (lower is better)
Translates to: QISPMLLDLRLH*ENHDLYSSPLK
Trigger: TTTAAGTGGTGAAGAGTATAAATCGTGGTTTTCCAAGTGTAGTCTAAGGTCTAACAGCATCGGGGATATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000547341.5
ENST00000549158.5
ENST00000549805.5
ENST00000549932.5
ENST00000613499.4