RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNJ1 (Homo sapiens)

Ensembl gene IDs: ENSG00000151704

Ensembl transcript IDs: ENST00000324036.7, ENST00000392664.2, ENST00000392665.6, ENST00000392666.6, ENST00000440599.6, ENST00000531562.1

Found 501 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGCAGCTGCCGTTTTATGTGCCAAGACTCACACTGGAGAGGCGTaGTGGAGCTGTACCGGAAGGGGTGTGTCTGTGGCCAGGGTCATT +
Preference number: 1 (lower is better)
Translates to: WAAAVLCAKTHTGEA*WSCTGRGVSVARVI
Trigger: AATGACCCTGGCCACAGACACACCCCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCTTGGCACATAAAACGGCAGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR CCA 90 bp CCAACAACTGTGGGCAGCTGCCGTTTTATGTGCCAAGACTCACACTaGAGAGGCGTGATGGAGCTGTACCGGAAGGGGTGTGTCTGTGGC +
Preference number: 1 (lower is better)
Translates to: PTTVGSCRFMCQDSH*RGVMELYRKGCVCG
Trigger: GCCACAGACACACCCCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCTTGGCACATAAAACGGCAGCTGCCCACAGTTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 90 bp CATAAGCCATCCCTCCCAACAACTGTGGGCAGCTGCCGTTTTATGTaGCAAGACTCACACTGGAGAGGCGTGATGGAGCTGTACCGGAAG +
Preference number: 1 (lower is better)
Translates to: HKPSLPTTVGSCRFM*QDSHWRGVMELYRK
Trigger: CTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCTTGGCACATAAAACGGCAGCTGCCCACAGTTGTTGGGAGGGATGGCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR TCA 90 bp AGCTGTACCGGAAGGGGTGTGTCTGTGGCCAGGGTCATTTCCTCCTaGGGACTCCAGACAACAAATGTGTCCTATCTGCTTCCTCTCCAC +
Preference number: 1 (lower is better)
Translates to: SCTGRGVSVARVISS*GLQTTNVSYLLPLH
Trigger: GTGGAGAGGAAGCAGATAGGACACATTTGTTGTCTGGAGTCCTCAGGAGGAAATGACCCTGGCCACAGACACACCCCTTCCGGTACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 90 bp GGCATGGAAAAACATAAGCCATCCCTCCCAACAACTGTGGGCAGCTaGCGTTTTATGTGCCAAGACTCACACTGGAGAGGCGTGATGGAG +
Preference number: 1 (lower is better)
Translates to: GMEKHKPSLPTTVGS*RFMCQDSHWRGVME
Trigger: CTCCATCACGCCTCTCCAGTGTGAGTCTTGGCACATAAAACGGCAGCTGCCCACAGTTGTTGGGAGGGATGGCTTATGTTTTTCCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR CCA 90 bp AAGGACCAGAGTGGTGCATGGATCTGTACAAATACAGCCCAGGCATaGAAAAACATAAGCCATCCCTCCCAACAACTGTGGGCAGCTGCC +
Preference number: 1 (lower is better)
Translates to: KDQSGAWICTNTAQA*KNISHPSQQLWAAA
Trigger: GGCAGCTGCCCACAGTTGTTGGGAGGGATGGCTTATGTTTTTCCATGCCTGGGCTGTATTTGTACAGATCCATGCACCACTCTGGTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR TCA 90 bp GTCAGCACATTAAATTGTGGTGCCAAAGCACTCACAGGTACAGAGTaGGAGTTCCACATGGGCCAGCTATGGCCACTGTTATGGCCACTG +
Preference number: 1 (lower is better)
Translates to: VSTLNCGAKALTGTE*EFHMGQLWPLLWPL
Trigger: CAGTGGCCATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTGAGTGCTTTGGCACCACAATTTAATGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 90 bp TCTACATGCATGCTGCCAGCCAGCAGGAGAATACACCAGGAAGAGTaGATGCTGATGGGAACAAGTGTCAACACAGTTTCCCTCCAGTTT +
Preference number: 1 (lower is better)
Translates to: STCMLPASRRIHQEE*MLMGTSVNTVSLQF
Trigger: AAACTGGAGGGAAACTGTGTTGACACTTGTTCCCATCAGCATGCACTCTTCCTGGTGTATTCTCCTGCTGGCTGGCAGCATGCATGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 90 bp TGTTTCATGAAAAATCCCCAAGGAAGACACTTCCTCAACCGTCTCTaGAATCCGCCCAGGGAGTTCTTCTGGAAGGTCCAGTTGCACATC +
Preference number: 1 (lower is better)
Translates to: CFMKNPQGRHFLNRL*NPPREFFWKVQLHI
Trigger: GATGTGCAACTGGACCTTCCAGAAGAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGATTTTTCATGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR TCA 90 bp TATGTTGTTCACCTCCCTAAACAATCAAAGGGAATGGATTGCTTATaGCCATCTCACTTCCAGCCATCTACATGCATGCTGCCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: YVVHLPKQSKGMDCL*PSHFQPSTCMLPAS
Trigger: GCTGGCTGGCAGCATGCATGTAGATGGCTGGAAGTGAGATGGTCATAAGCAATCCATTCCCTTTGATTGTTTAGGGAGGTGAACAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR CCA 90 bp CCAGTTTCATATAAATGCATTGCACGTTCTAATACAGTAGCCTTGTaGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGT +
Preference number: 1 (lower is better)
Translates to: PVSYKCIARSNTVAL*RCMSCGITIAGLRG
Trigger: ACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTTATATGAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR GCA 90 bp TCAGAAGCTGTCCTAACGTTTGTTCTAGACAGGGAAAGATCCCCGTaGTATTCACAGAAGCATCCTGTTGAGGACCCATATTCTGTTTCA +
Preference number: 1 (lower is better)
Translates to: SEAVLTFVLDRERSP*YSQKHPVEDPYSVS
Trigger: TGAAACAGAATATGGGTCCTCAACAGGATGCTTCTGTGAATAGCACGGGGATCTTTCCCTGTCTAGAACAAACGTTAGGACAGCTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR TCA 90 bp TGCTATTCACAGAAGCATCCTGTTGAGGACCCATATTCTGTTTCATaGAAAATCCCCAAGGAAGACACTTCCTCAACCGTCTCTGCAATC +
Preference number: 1 (lower is better)
Translates to: CYSQKHPVEDPYSVS*KIPKEDTSSTVSAI
Trigger: GATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGATTTTTCATGAAACAGAATATGGGTCCTCAACAGGATGCTTCTGTGAATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR TCA 90 bp AACTGTTTCTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTaGCTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAG +
Preference number: 1 (lower is better)
Translates to: NCFFSGALMIHSLLY*LCTFQLLIAVFEEQ
Trigger: CTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAGAAACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR CCA 90 bp TCAGAAAGATGTATGTTGTTCACCTCCCTAAACAATCAAAGGGAATaGATTGCTTATGACCATCTCACTTCCAGCCATCTACATGCATGC +
Preference number: 1 (lower is better)
Translates to: SERCMLFTSLNNQRE*IAYDHLTSSHLHAC
Trigger: GCATGCATGTAGATGGCTGGAAGTGAGATGGTCATAAGCAATCCATTCCCTTTGATTGTTTAGGGAGGTGAACAACATACATCTTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 90 bp CTAAAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTaGAGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGA +
Preference number: 1 (lower is better)
Translates to: LKHSVLQEGIIKILV*RFSLCLNVPHEKLR
Trigger: TCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR GCA 90 bp TTTCAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATaGATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCT +
Preference number: 1 (lower is better)
Translates to: FQESTYVFHTPVSYK*IARSNTVALWRCMS
Trigger: AGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR GCA 90 bp GATACATTCCCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTaGTGTCTTCGAAGAGCAGGAAATGCTCTTTATAAACAGATTTAT +
Preference number: 1 (lower is better)
Translates to: DTFPSLLTLHLPTPH*CLRRAGNALYKQIY
Trigger: ATAAATCTGTTTATAAAGAGCATTTCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR CCA 90 bp AATAAAAAGGCTGCCTTTAGCAGTGGTGTTAACCTACAAGCAGTTTaGCCTTCTCAGGCTATTTTTCATTTCTCTTTACTACTTGAGCAC +
Preference number: 1 (lower is better)
Translates to: NKKAAFSSGVNLQAV*PSQAIFHFSLLLEH
Trigger: GTGCTCAAGTAGTAAAGAGAAATGAAAAATAGCCTGAGAAGGCCAAACTGCTTGTAGGTTAACACCACTGCTAAAGGCAGCCTTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR CCA 90 bp TGCTTTCCATTAAAGACAACCTCCCAAATCTTAACTCTTAAATATTaGAGCTTGAGCCAACCTAAGTCCAGGAAGATTCAACCAGGATCA +
Preference number: 1 (lower is better)
Translates to: CFPLKTTSQILTLKY*SLSQPKSRKIQPGS
Trigger: TGATCCTGGTTGAATCTTCCTGGACTTAGGTTGGCTCAAGCTCCAATATTTAAGAGTTAAGATTTGGGAGGTTGTCTTTAATGGAAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR GCA 90 bp CACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATGGCCGGAGAGGGTCCTCTCTaGAAGAGGATTTTCACCTGG +
Preference number: 2 (lower is better)
Translates to: HRYRVRVPHGPAMATVMAGEGPL*KRIFTW
Trigger: CCAGGTGAAAATCCTCTTGCAGAGAGGACCCTCTCC...GGCCATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR GCA 90 bp TCCCCAAGGAAGACACTTCCTCAACCGTCTCTGCAATCCGCCCAGGGAGTTCTTTGCACAGGAGTGTTATaGGCTTTGGGGTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SPRKTLPQPSLQSAQGVLCTGVL*ALGFQP
Trigger: TGGCTGGAACCCCAAAGCGCATAACACTCCTGTGCA...AAGAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CCA 90 bp AGACTCACACTGGAGAGGCGTGATGGAGCTGTACCGGAAGGGGTGTGTCTGTGGGAGCCTTCCATAAGCTaGTCCCTTTTAGGAAGATGG +
Preference number: 2 (lower is better)
Translates to: RLTLERRDGAVPEGVCLWEPSIS*SLLGRW
Trigger: CCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC...CCACAGACACACCCCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR TCA 90 bp TCCCCAAGGAAGACACTTCCTCAACCGTCTCTGCAATCCGCCCAGGGAGTTCTTGACATAGTAACATTCTaGCTGTGGGGCTCCATCCCA +
Preference number: 2 (lower is better)
Translates to: SPRKTLPQPSLQSAQGVLDIVTF*LWGSIP
Trigger: TGGGATGGAGCCCCACAGTCAGAATGTTACTATGTC...AAGAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CCA 90 bp TCTCTGCAATCCGCCCAGGGAGTTCTTCTGGAAGGTCCAGTTGCACATCCCCTTGAGTGTTATGCGCTTTaGGGTTCCAGCCACTCCTTA +
Preference number: 2 (lower is better)
Translates to: SLQSAQGVLLEGPVAHPLECYAL*GSSHSL
Trigger: TAAGGAGTGGCTGGAACCCCAAAGCGCATAACACTC...AAGGGGATGTGCAACTGGACCTTCCAGAAGAACTCCCTGGGCGGATTGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR CAA 90 bp AACCGTCTCTGCAATCCGCCCAGGGAGTTCTTCTGGAAGGTCCAGTaGCACATCCCCTTAGTGATGGATAGAGAAGGACAGTCACCTATC +
Preference number: 2 (lower is better)
Translates to: NRLCNPPREFFWKVQ*HIPLVMDREGQSPI
Trigger: GATAGGTGACTGTCCTTCTCTATCCATCACTAAGGGGATGTGCAACTGGACCTTCCAGAAGAACTCCCTGGGCGGATTGCAGAGACGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR GCA 90 bp GGCCAGGGTCATTTCCTCCTGAGGACTCCAGACAACAAATGTGTCCTATCTGCTTTGTGGGATCACAATTaGGGGGCTCAGGGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: GQGHFLLRTPDNKCVLSALWDHN*GAQGSL
Trigger: CAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAA...AGCAGATAGGACACATTTGTTGTCTGGAGTCCTCAGGAGGAAATGACCCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CCA 90 bp CACTCACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATCCCTCCCAACAACTGTaGGCAGCTGCCGTTTTATGT +
Preference number: 2 (lower is better)
Translates to: HSQVQSESSTWASYGHCYPSQQL*AAAVLC
Trigger: ACATAAAACGGCAGCTGCCCACAGTTGTTGGGAGGG...ATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CCA 90 bp TCCCCAAGGAAGACACTTCCTCAACCGTCTCTGCAATCCGCCCAGGGAGTTCTTAATACAGTAGCCTTGTaGAGATGCATGTCTTGTGGG +
Preference number: 2 (lower is better)
Translates to: SPRKTLPQPSLQSAQGVLNTVAL*RCMSCG
Trigger: CCCACAAGACATGCATCTCCACAAGGCTACTGTATT...AAGAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR TCA 90 bp CACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATGGCCGTACCCCTAAATTGTTaGCTGCTTCATAATGCTTCT +
Preference number: 2 (lower is better)
Translates to: HRYRVRVPHGPAMATVMAVPLNC*LLHNAS
Trigger: AGAAGCATTATGAAGCAGTCAACAATTTAGGGGTAC...GGCCATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR TCA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCGTACCCCTAAATTGTTaGCTGCTTCATAATGCTTCT +
Preference number: 2 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGVPLNC*LLHNAS
Trigger: AGAAGCATTATGAAGCAGTCAACAATTTAGGGGTAC...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR TCA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGCATTCCCTTCTCTACTaGCTTTGCACCTTCCAACTC +
Preference number: 2 (lower is better)
Translates to: EPSISWSLLGRWAVRERKHSLLY*LCTFQL
Trigger: GAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATG...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR TCA 90 bp GGCCAGGGTCATTTCCTCCTGAGGACTCCAGACAACAAATGTGTCCTATCTGCTAGGTGGAGGAACACATaGAACTGTTTCTTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: GQGHFLLRTPDNKCVLSARWRNT*NCFFSG
Trigger: ACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCT...AGCAGATAGGACACATTTGTTGTCTGGAGTCCTCAGGAGGAAATGACCCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CCA 90 bp CACTCACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATTCCCTTTTAGGAAGATaGGCTGTCAGGGAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: HSQVQSESSTWASYGHCYSLLGR*AVRERK
Trigger: CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGA...ATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR TCA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGTACCCCTAAATTGTTaGCTGCTTCATAATGCTTCT +
Preference number: 2 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCVPLNC*LLHNAS
Trigger: AGAAGCATTATGAAGCAGTCAACAATTTAGGGGTAC...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR TCA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGCATTCCCTTCTCTACTaGCTTTGCACCTTCCAACTC +
Preference number: 2 (lower is better)
Translates to: VMDREGQSPISPCLKKAWHSLLY*LCTFQL
Trigger: GAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATG...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR TCA 90 bp CTTTACTACTTGAGCACCCATTCCCTTGTTACCCCCTTTCTTAAAATGCACAGGAGGACACATTCGGAATaGTGCAGGTGGGGATCTGAA +
Preference number: 2 (lower is better)
Translates to: LYYLSTHSLVTPFLKMHRRTHSE*CRWGSE
Trigger: TTCAGATCCCCACCTGCATCATTCCGAATGTGTCCT...CCTGTGCATTTTAAGAAAGGGGGTAACAAGGGAATGGGTGCTCAAGTAGTAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR CAA 90 bp ACACCAGTTTCATATAAATGCATTGCACGTTCTAATACAGTAGCCTaGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: TPVSYKCIARSNTVA*WRCMSCGITIAGLR
Trigger: CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTTATATGAAACTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR TCA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAGTACCCCTAAATTGTTaGCTGCTTCATAATGCTTCT +
Preference number: 2 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGVPLNC*LLHNAS
Trigger: AGAAGCATTATGAAGCAGTCAACAATTTAGGGGTAC...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR TCA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 2 (lower is better)
Translates to: KCIARSNTVALWRCMSCGCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR GCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTTGTGGGATCACAATTaGGGGGCTCAGGGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: KRAPMSSIHQFHINALHVLWDHN*GAQGSL
Trigger: CAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAA...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR GCA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGTTGTGGGATCACAATTaGGGGGCTCAGGGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLLWDHN*GAQGSL
Trigger: CAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAA...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR CAA 90 bp TTTCTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTaGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: FLLRCINDTFPSLLT*HLPTPHCCLRRAGN
Trigger: ATTTCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR TCA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGGTACCCCTAAATTGTTaGCTGCTTCATAATGCTTCT +
Preference number: 2 (lower is better)
Translates to: KCIARSNTVALWRCMSCGVPLNC*LLHNAS
Trigger: AGAAGCATTATGAAGCAGTCAACAATTTAGGGGTAC...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CCA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTGAGATGCATGTCTTGTaGGATCACAATTGCGGGGCT +
Preference number: 2 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFEMHVL*DHNCGA
Trigger: AGCCCCGCAATTGTGATCCCACAAGACATGCATCTC...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CCA 90 bp TCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGAGATGCATGTCTTGTaGGATCACAATTGCGGGGCT +
Preference number: 2 (lower is better)
Translates to: SLCKRFLVIDWLVHLPKLEMHVL*DHNCGA
Trigger: AGCCCCGCAATTGTGATCCCACAAGACATGCATCTC...TAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR CAA 90 bp CCATTAAAGACAACCTCCCAAATCTTAACTCTTAAATATTGGAGCTaGAGCCAACCTAAGTCCAGGAAGATTCAACCAGGATCAAACGCT +
Preference number: 2 (lower is better)
Translates to: PLKTTSQILTLKYWS*SQPKSRKIQPGSNA
Trigger: AGCGTTTGATCCTGGTTGAATCTTCCTGGACTTAGGTTGGCTCAAGCTCCAATATTTAAGAGTTAAGATTTGGGAGGTTGTCTTTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR TCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 2 (lower is better)
Translates to: KRAPMSSIHQFHINALHVCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR TCA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 2 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CCA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCGAGATGCATGTCTTGTaGGATCACAATTGCGGGGCT +
Preference number: 2 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLEMHVL*DHNCGA
Trigger: AGCCCCGCAATTGTGATCCCACAAGACATGCATCTC...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR TCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 2 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR TCA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 2 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CCA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTAATACAGTAGCCTTGTaGAGATGCATGTCTTGTGGG +
Preference number: 2 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFNTVAL*RCMSCG
Trigger: CCCACAAGACATGCATCTCCACAAGGCTACTGTATT...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CCA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTTTCTTGTCATTGATTaGTTGGTTCATCTCCCCAAA +
Preference number: 2 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCFLVID*LVHLPK
Trigger: TTTGGGGAGATGAACCAACCAATCAATGACAAGAAA...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR TCA 72 bp GCCGTTTTATGTGCCAAGACTCACACTGGAGAGGCGTaGTGGAGCTGTACCGGAAGGGGTGTGTCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: AVLCAKTHTGEA*WSCTGRGVSVA
Trigger: GGCCACAGACACACCCCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCTTGGCACATAAAACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 72 bp CCACTCCTCCCGCCCCTTCCAGGAGAGGGTCCTCTCTaGAAGAGGATTTTCACCTGGAACCTGACTCAGTTA +
Preference number: 3 (lower is better)
Translates to: PLLPPLPGEGPL*KRIFTWNLTQL
Trigger: TAACTGAGTCAGGTTCCAGGTGAAAATCCTCTTGCAGAGAGGACCCTCTCCTGGAAGGGGCGGGAGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 72 bp TCCCTCCCAACAACTGTGGGCAGCTGCCGTTTTATGTaGCAAGACTCACACTGGAGAGGCGTGATGGAGCTG +
Preference number: 3 (lower is better)
Translates to: SLPTTVGSCRFM*QDSHWRGVMEL
Trigger: CAGCTCCATCACGCCTCTCCAGTGTGAGTCTTGGCACATAAAACGGCAGCTGCCCACAGTTGTTGGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CAA 90 bp ATGTGCCAAGACTCACACTGGAGAGGCGTGATGGAGCTGTACCGGAAGGGGTGTCCTTCTCTACTGACTTaGCACCTTCCAACTCCTCAT +
Preference number: 3 (lower is better)
Translates to: MCQDSHWRGVMELYRKGCPSLLT*HLPTPH
Trigger: ATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG...ACACCCCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCTTGGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 72 bp AAACATAAGCCATCCCTCCCAACAACTGTGGGCAGCTaGCGTTTTATGTGCCAAGACTCACACTGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: KHKPSLPTTVGS*RFMCQDSHWRG
Trigger: GCCTCTCCAGTGTGAGTCTTGGCACATAAAACGGCAGCTGCCCACAGTTGTTGGGAGGGATGGCTTATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 72 bp AAAAATCCCCAAGGAAGACACTTCCTCAACCGTCTCTaGAATCCGCCCAGGGAGTTCTTCTGGAAGGTCCAG +
Preference number: 3 (lower is better)
Translates to: KNPQGRHFLNRL*NPPREFFWKVQ
Trigger: CTGGACCTTCCAGAAGAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR TCA 72 bp CAGCCAGCAGGAGAATACACCAGGAAGAGTGCATGCTaGTGGGAACAAGTGTCAACACAGTTTCCCTCCAGT +
Preference number: 3 (lower is better)
Translates to: QPAGEYTRKSAC*WEQVSTQFPSS
Trigger: ACTGGAGGGAAACTGTGTTGACACTTGTTCCCATCAGCATGCACTCTTCCTGGTGTATTCTCCTGCTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 72 bp TATGACCATCTCACTTCCAGCCATCTACATGCATGCTaGCAGCCAGCAGGAGAATACACCAGGAAGAGTGCA +
Preference number: 3 (lower is better)
Translates to: YDHLTSSHLHAC*QPAGEYTRKSA
Trigger: TGCACTCTTCCTGGTGTATTCTCCTGCTGGCTGGCAGCATGCATGTAGATGGCTGGAAGTGAGATGGTCATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR GCA 72 bp GCTTATGACCATCTCACTTCCAGCCATCTACATGCATaGTGCCAGCCAGCAGGAGAATACACCAGGAAGAGT +
Preference number: 3 (lower is better)
Translates to: AYDHLTSSHLHA*CQPAGEYTRKS
Trigger: ACTCTTCCTGGTGTATTCTCCTGCTGGCTGGCAGCATGCATGTAGATGGCTGGAAGTGAGATGGTCATAAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CAA 90 bp GAGTGCATGCTGATGGGAACAAGTGTCAACACAGTTTCCCTCCAGTTTATGAAGCTTGTGGGATCACAATaGCGGGGCTCAGGGGTCTTT +
Preference number: 3 (lower is better)
Translates to: ECMLMGTSVNTVSLQFMKLVGSQ*RGSGVF
Trigger: AAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG...CTTCATAAACTGGAGGGAAACTGTGTTGACACTTGTTCCCATCAGCATGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CAA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGGTGGAGATGCATGTCTaGTGGGATCACAATTGCGGG +
Preference number: 3 (lower is better)
Translates to: VMDREGQSPISPCLKKAWVEMHV*WDHNCG
Trigger: CCCGCAATTGTGATCCCACAAGACATGCATCTCCAC...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CAA 90 bp CTCTGCAATCCGCCCAGGGAGTTCTTCTGGAAGGTCCAGTTGCACATCCCCTTACTTGTCATTGATTGGTaGGTTCATCTCCCCAAATTA +
Preference number: 3 (lower is better)
Translates to: LCNPPREFFWKVQLHIPLLVIDW*VHLPKL
Trigger: TAATTTGGGGAGATGAACCAACCAATCAATGACAAG...TAAGGGGATGTGCAACTGGACCTTCCAGAAGAACTCCCTGGGCGGATTGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR TCA 72 bp TTAAATTGTGGTGCCAAAGCACTCACAGGTACAGAGTaGGAGTTCCACATGGGCCAGCTATGGCCACTGTTA +
Preference number: 3 (lower is better)
Translates to: LNCGAKALTGTE*EFHMGQLWPLL
Trigger: TAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTGAGTGCTTTGGCACCACAATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR CCA 72 bp AGTGGTGCATGGATCTGTACAAATACAGCCCAGGCATaGAAAAACATAAGCCATCCCTCCCAACAACTGTGG +
Preference number: 3 (lower is better)
Translates to: SGAWICTNTAQA*KNISHPSQQLW
Trigger: CCACAGTTGTTGGGAGGGATGGCTTATGTTTTTCCATGCCTGGGCTGTATTTGTACAGATCCATGCACCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR CCA 72 bp CCCACTGTTCTTAGTCAGAAGGACCAGAGTGGTGCATaGATCTGTACAAATACAGCCCAGGCATGGAAAAAC +
Preference number: 3 (lower is better)
Translates to: PTVLSQKDQSGA*ICTNTAQAWKN
Trigger: GTTTTTCCATGCCTGGGCTGTATTTGTACAGATCCATGCACCACTCTGGTCCTTCTGACTAAGAACAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CAA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTCTTGTGGGATCACAATaGCGGGGCTCAGGGGTCTTT +
Preference number: 3 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSLVGSQ*RGSGVF
Trigger: AAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR GCA 72 bp GTCCTAACGTTTGTTCTAGACAGGGAAAGATCCCCGTaGTATTCACAGAAGCATCCTGTTGAGGACCCATAT +
Preference number: 3 (lower is better)
Translates to: VLTFVLDRERSP*YSQKHPVEDPY
Trigger: ATATGGGTCCTCAACAGGATGCTTCTGTGAATAGCACGGGGATCTTTCCCTGTCTAGAACAAACGTTAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CAA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGCTTGTCATTGATTGGTaGGTTCATCTCCCCAAATTA +
Preference number: 3 (lower is better)
Translates to: EPSISWSLLGRWAVRERKLVIDW*VHLPKL
Trigger: TAATTTGGGGAGATGAACCAACCAATCAATGACAAG...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CAA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAAGCGTTTTCTTGTCATaGATTGGTTGGTTCATCTCC +
Preference number: 3 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRASVFLS*IGWFIS
Trigger: GGAGATGAACCAACCAATCAATGACAAGAAAACGCT...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CAA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGTGTGTAAGCGTTTTCTaGTCATTGATTGGTTGGTTC +
Preference number: 3 (lower is better)
Translates to: EPSISWSLLGRWAVRERKCVSVF*SLIGWF
Trigger: GAACCAACCAATCAATGACAAGAAAACGCTTACACA...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CAA 90 bp CCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGTGCATCCTTCTCTACTGACTTaGCACCTTCCAACTCCTCAT +
Preference number: 3 (lower is better)
Translates to: PVQTLGGGTHETVSSQVHPSLLT*HLPTPH
Trigger: ATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG...ATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR TCA 72 bp CACCTCCCTAAACAATCAAAGGGAATGGATTGCTTATaGCCATCTCACTTCCAGCCATCTACATGCATGCTG +
Preference number: 3 (lower is better)
Translates to: HLPKQSKGMDCL*PSHFQPSTCML
Trigger: CAGCATGCATGTAGATGGCTGGAAGTGAGATGGTCATAAGCAATCCATTCCCTTTGATTGTTTAGGGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR TCA 72 bp CAGAAGCATCCTGTTGAGGACCCATATTCTGTTTCATaGAAAATCCCCAAGGAAGACACTTCCTCAACCGTC +
Preference number: 3 (lower is better)
Translates to: QKHPVEDPYSVS*KIPKEDTSSTV
Trigger: GACGGTTGAGGAAGTGTCTTCCTTGGGGATTTTTCATGAAACAGAATATGGGTCCTCAACAGGATGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CAA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTGTGGAGATGCATGTCTaGTGGGATCACAATTGCGGG +
Preference number: 3 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFVEMHV*WDHNCG
Trigger: CCCGCAATTGTGATCCCACAAGACATGCATCTCCAC...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR CCA 72 bp TATAAATGCATTGCACGTTCTAATACAGTAGCCTTGTaGAGATGCATGTCTTGTGGGATCACAATTGCGGGG +
Preference number: 3 (lower is better)
Translates to: YKCIARSNTVAL*RCMSCGITIAG
Trigger: CCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTGGAGATGCATGTCTaGTGGGATCACAATTGCGGG +
Preference number: 3 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLVEMHV*WDHNCG
Trigger: CCCGCAATTGTGATCCCACAAGACATGCATCTCCAC...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CAA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGTGTGTAAGCGTTTTCTaGTCATTGATTGGTTGGTTC +
Preference number: 3 (lower is better)
Translates to: VMDREGQSPISPCLKKAWCVSVF*SLIGWF
Trigger: GAACCAACCAATCAATGACAAGAAAACGCTTACACA...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR TCA 72 bp TTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTaGCTTTGCACCTTCCAACTCCTCATTGCTGTCTTC +
Preference number: 3 (lower is better)
Translates to: FSGALMIHSLLY*LCTFQLLIAVF
Trigger: GAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR GCA 72 bp TCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTaGAGATTTAGCCTCTGTCTAAACGTACCACATGAG +
Preference number: 3 (lower is better)
Translates to: SVLQEGIIKILV*RFSLCLNVPHE
Trigger: CTCATGTGGTACGTTTAGACAGAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR GCA 72 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTaGTGTCTTCGAAGAGCAGGAAATGCTCTTTATAAA +
Preference number: 3 (lower is better)
Translates to: PSLLTLHLPTPH*CLRRAGNALYK
Trigger: TTTATAAAGAGCATTTCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CAA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCAGCGTTTTCTTGTCATaGATTGGTTGGTTCATCTCC +
Preference number: 3 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLSVFLS*IGWFIS
Trigger: GGAGATGAACCAACCAATCAATGACAAGAAAACGCT...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CAA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGCTAAAGCATTCTGTCTaGCAGGAAGGTATCATCAAG +
Preference number: 3 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQLKHSV*QEGIIK
Trigger: CTTGATGATACCTTCCTGCAAGACAGAATGCTTTAG...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR CCA 72 bp TGTATGTTGTTCACCTCCCTAAACAATCAAAGGGAATaGATTGCTTATGACCATCTCACTTCCAGCCATCTA +
Preference number: 3 (lower is better)
Translates to: CMLFTSLNNQRE*IAYDHLTSSHL
Trigger: TAGATGGCTGGAAGTGAGATGGTCATAAGCAATCCATTCCCTTTGATTGTTTAGGGAGGTGAACAACATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR-3UTR CAA 90 bp CTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTTGCACCTTCCATGTGTAAGCGTTTTCTaGTCATTGATTGGTTGGTTC +
Preference number: 3 (lower is better)
Translates to: LLRCINDTFPSLLTLHLPCVSVF*SLIGWF
Trigger: GAACCAACCAATCAATGACAAGAAAACGCTTACACA...TGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR GCA 72 bp AGCACCTATGTCTTCCATACACCAGTTTCATATAAATaGATTGCACGTTCTAATACAGTAGCCTTGTGGAGA +
Preference number: 3 (lower is better)
Translates to: STYVFHTPVSYK*IARSNTVALWR
Trigger: TCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR-3UTR CAA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTaGGTTCATCTCCCCAAATTA +
Preference number: 3 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFLVIDW*VHLPKL
Trigger: TAATTTGGGGAGATGAACCAACCAATCAATGACAAG...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATGGCCTTCCAGCCATCTACATaGATGCTGCCAGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HRYRVRVPHGPAMATVMAFQPST*MLPASR
Trigger: CCTGCTGGCTGGCAGCATGCATGTAGATGGCTGGAA...GGCCATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTGGGCCTGGAGATCTTaGCTAAGATGGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGWAWRS*LRWPHT
Trigger: TGTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCA...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TCTCTGCAATCCGCCCAGGGAGTTCTTCTGGAAGGTCCAGTTGCACATCCCCTTGAAGGGGTGTGTCTGTaGCCAGGGTCATTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLQSAQGVLLEGPVAHPLEGVCL*PGSFPP
Trigger: AGGAGGAAATGACCCTGGCCACAGACACACCCCTTC...AAGGGGATGTGCAACTGGACCTTCCAGAAGAACTCCCTGGGCGGATTGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGTTTGGATATGCTAGGTaGGGGTACCCGAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRFGYAR*GYPRPC
Trigger: ACAGGGCCTCGGGTACCCTCACCTAGCATATCCAAA...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR GCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGAGAAGGGTCTCCGCTaGCATGTGGAAGAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLREKGLR*HVEERA
Trigger: AGCCCTTTCTTCCACATGGCAGCGGAGACCCTTCTC...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp TCCCCAAGGAAGACACTTCCTCAACCGTCTCTGCAATCCGCCCAGGGAGTTCTTTTGTGGGATCACAATTaGGGGGCTCAGGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SPRKTLPQPSLQSAQGVLLWDHN*GAQGSL
Trigger: CAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAA...AAGAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp AGCCATCTACATGCATGCTGCCAGCCAGCAGGAGAATACACCAGGAAGAGTGCATGGGCCTGGAGATCTTaGCTAAGATGGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: SHLHACCQPAGEYTRKSAWAWRS*LRWPHT
Trigger: TGTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCA...TGCACTCTTCCTGGTGTATTCTCCTGCTGGCTGGCAGCATGCATGTAGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp CACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATGGCCAATTCAAAGTCCTGCTaGAGAAGGGTCTCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: HRYRVRVPHGPAMATVMANSKSC*RRVSAA
Trigger: GGCAGCGGAGACCCTTCTCCAGCAGGACTTTGAATT...GGCCATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCTCCTTCAGGAGTaGCTGTGGTCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGSLLQE*LWSSEA
Trigger: AGCTTCTGAAGACCACAGTCACTCCTGAAGGAGAGA...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGCACACTGGAGAGGCGTaGTGGAGCTGTACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRHTGEA*WSCTGR
Trigger: CCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTG...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCCAGCTCAGACCGGCTaGCAACTCATCTGTATGCAA +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSPAQTG*QLICMQ
Trigger: TTGCATACAGATGAGTTGGCAGCCGGTCTGAGCTGG...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324036.7
CDS-3UTR GCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGAGAAGGGTCTCCGCTaGCATGTGGAAGAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEEKGLR*HVEERA
Trigger: AGCCCTTTCTTCCACATGGCAGCGGAGACCCTTCTC...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCTTGTGGGATCACAATTaGGGGGCTCAGGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFLWDHN*GAQGSL
Trigger: CAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAA...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTTGCACAGGAGTGTTATaGGCTTTGGGGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSCTGVL*ALGFQP
Trigger: TGGCTGGAACCCCAAAGCGCATAACACTCCTGTGCA...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCAATTCAAAGTCCTGCTaGAGAAGGGTCTCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFNSKSC*RRVSAA
Trigger: GGCAGCGGAGACCCTTCTCCAGCAGGACTTTGAATT...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
3UTR CAA 72 bp TGCAATCCGCCCAGGGAGTTCTTCTGGAAGGTCCAGTaGCACATCCCCTTAGTGATGGATAGAGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: CNPPREFFWKVQ*HIPLVMDREGQ
Trigger: CTGTCCTTCTCTATCCATCACTAAGGGGATGTGCAACTGGACCTTCCAGAAGAACTCCCTGGGCGGATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAATACCCGAGGCCCTGTTaGTTTTATGAGTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEYPRPC*FYESVG
Trigger: GCCCACAGACTCATAAAATCAACAGGGCCTCGGGTA...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR TCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCTCTCTCCTTCAGGAGTaGCTGTGGTCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFSLLQE*LWSSEA
Trigger: AGCTTCTGAAGACCACAGTCACTCCTGAAGGAGAGA...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGTCTCTCCTTCAGGAGTaGCTGTGGTCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRSLLQE*LWSSEA
Trigger: AGCTTCTGAAGACCACAGTCACTCCTGAAGGAGAGA...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCCATTCCCTTCTCTACTaGCTTTGCACCTTCCAACTC +
Preference number: 4 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGHSLLY*LCTFQL
Trigger: GAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATG...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AGCCATCTACATGCATGCTGCCAGCCAGCAGGAGAATACACCAGGAAGAGTGCAGACATAGTAACATTCTaGCTGTGGGGCTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: SHLHACCQPAGEYTRKSADIVTF*LWGSIP
Trigger: TGGGATGGAGCCCCACAGTCAGAATGTTACTATGTC...TGCACTCTTCCTGGTGTATTCTCCTGCTGGCTGGCAGCATGCATGTAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCGACATAGTAACATTCTaGCTGTGGGGCTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFDIVTF*LWGSIP
Trigger: TGGGATGGAGCCCCACAGTCAGAATGTTACTATGTC...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGTGACCAGCAAGAGCTaGTTGGTTTGGGATTCCACC +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEVTSKS*LVWDST
Trigger: GGTGGAATCCCAAACCAAGCAGCTCTTGCTGGTCAC...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CCA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCGCAGAAAAATGGCAGTaGCACACTGTTCTGTCACAC +
Preference number: 4 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGAEKWQ*HTVLSH
Trigger: GTGTGACAGAACAGTGTGCCACTGCCATTTTTCTGC...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAAATTCAAAGTCCTGCTaGAGAAGGGTCTCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFENSKSC*RRVSAA
Trigger: GGCAGCGGAGACCCTTCTCCAGCAGGACTTTGAATT...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGAGATGCATGTCTTGTaGGATCACAATTGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLREMHVL*DHNCGA
Trigger: AGCCCCGCAATTGTGATCCCACAAGACATGCATCTC...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCGAGATGCATGTCTTGTaGGATCACAATTGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFEMHVL*DHNCGA
Trigger: AGCCCCGCAATTGTGATCCCACAAGACATGCATCTC...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTGAGTGTTATGCGCTTTaGGGTTCCAGCCACTCCTTA +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSECYAL*GSSHSL
Trigger: TAAGGAGTGGCTGGAACCCCAAAGCGCATAACACTC...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp TCCCCAAGGAAGACACTTCCTCAACCGTCTCTGCAATCCGCCCAGGGAGTTCTTAAGTCCCTGCACCTTTaGTGCAAGAGTTTGGATATG +
Preference number: 4 (lower is better)
Translates to: SPRKTLPQPSLQSAQGVLKSLHL*CKSLDM
Trigger: CATATCCAAACTCTTGCATCAAAGGTGCAGGGACTT...AAGAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAACCAGATTCTCGATGTaGGCAAGTCCCTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFETRFSM*ASPCTF
Trigger: AAAGGTGCAGGGACTTGCTCACATCGAGAATCTGGT...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAATCCGGGAGGTCTTTGTaGATGTACGCTACTGCATAC +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFESGRSL*MYATAY
Trigger: GTATGCAGTAGCGTACATTCACAAAGACCTCCCGGA...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCGTTCTGTCACACACCTaGATCCATATCCAATGGTCA +
Preference number: 4 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGVLSHT*IHIQWS
Trigger: TGACCATTGGATATGGATTCAGGTGTGTGACAGAAC...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TCCCCAAGGAAGACACTTCCTCAACCGTCTCTGCAATCCGCCCAGGGAGTTCTTTTTCCCTCCAGTTTATaGAGGGGCTACATCATGACA +
Preference number: 4 (lower is better)
Translates to: SPRKTLPQPSLQSAQGVLFPSSL*RGYIMT
Trigger: TGTCATGATGTAGCCCCTTCATAAACTGGAGGGAAA...AAGAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTGGTGGACTCCACTGTaGCATCTAAAAACACCACTA +
Preference number: 4 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGWWTPL*HLKTPL
Trigger: TAGTGGTGTTTTTAGATGGCACAGTGGAGTCCACCA...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTGCAGAAAAATGGCAGTaGCACACTGTTCTGTCACAC +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSAEKWQ*HTVLSH
Trigger: GTGTGACAGAACAGTGTGCCACTGCCATTTTTCTGC...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTTTGTCTTGGATACTATaGGAGCAAAACGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSLSWIL*EQNGSP
Trigger: GGGGCTACCGTTTTGCTCCCATAGTATCCAAGACAA...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAGCCCTGTTGATTTTATaGGTCTGTGGGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGALLIL*VCGPAQ
Trigger: CTGAGCTGGCCCACAGACTCATAAAATCAACAGGGC...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR TCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGAAGTCCCTGCACCTTTaGTGCAAGAGTTTGGATATG +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRKSLHL*CKSLDM
Trigger: CATATCCAAACTCTTGCATCAAAGGTGCAGGGACTT...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGTTTTGTATCTCCACTTaGGGTCAAGTACCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRFCIST*GQVPLS
Trigger: GGACAACGGTACTTGACCTCAAGTGGAGATACAAAA...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGTTCTGTCACACACCTaGATCCATATCCAATGGTCA +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRVLSHT*IHIQWS
Trigger: TGACCATTGGATATGGATTCAGGTGTGTGACAGAAC...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp ATGTGCCAAGACTCACACTGGAGAGGCGTGATGGAGCTGTACCGGAAGGGGTGTCCATATTCTGTTTCATaGAAAATCCCCAAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: MCQDSHWRGVMELYRKGCPYSVS*KIPKED
Trigger: GTCTTCCTTGGGGATTTTTCATGAAACAGAATATGG...ACACCCCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCTTGGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTGTGAATGTACGCTACTaGATACCACAGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSVNVRY*IPQETK
Trigger: TTTGGTCTCCTGTGGTATGCAGTAGCGTACATTCAC...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGTGAATGTACGCTACTaGATACCACAGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRVNVRY*IPQETK
Trigger: TTTGGTCTCCTGTGGTATGCAGTAGCGTACATTCAC...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGCCGTTTGCTGATCACTaGGTTCTTGCTGAACGTAAT +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRPFADH*VLAERN
Trigger: ATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGG...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AGACTCACACTGGAGAGGCGTGATGGAGCTGTACCGGAAGGGGTGTGTCTGTGGATCAAGATTCTAGTGTaGAGATTTAGCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: RLTLERRDGAVPEGVCLWIKILV*RFSLCL
Trigger: TAGACAGAGGCTAAATCTGCACACTAGAATCTTGAT...CCACAGACACACCCCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp GAAGCTGTCCTAACGTTTGTTCTAGACAGGGAAAGATCCCCGTGCTATTCACAGGGAGAGGGTCCTCTCTaGAAGAGGATTTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: EAVLTFVLDRERSPCYSQGEGPL*KRIFTW
Trigger: CCAGGTGAAAATCCTCTTGCAGAGAGGACCCTCTCC...CTGTGAATAGCACGGGGATCTTTCCCTGTCTAGAACAAACGTTAGGACAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAGATTTTATGAGTCTGTaGGCCAGCTCAGACCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGDFMSL*ASSDRL
Trigger: CAGCCGGTCTGAGCTGGCCCACAGACTCATAAAATC...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCTGTATAAGTAGATCTTaGGGTGACCAGCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFCISRS*GDQQEL
Trigger: CAGCTCTTGCTGGTCACCCCAAGATCTACTTATACA...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGTGCACCTTCCATCTTTaGAGACTAGCCTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRCTFHL*RLALLF
Trigger: AAAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCA...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTTGCACCTTCCATCTTTaGAGACTAGCCTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSCTFHL*RLALLF
Trigger: AAAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCA...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAATTCAAAGTCCTGCTaGAGAAGGGTCTCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRNSKSC*RRVSAA
Trigger: GGCAGCGGAGACCCTTCTCCAGCAGGACTTTGAATT...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAATTGTCTTGGATACTATaGGAGCAAAACGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFELSWIL*EQNGSP
Trigger: GGGGCTACCGTTTTGCTCCCATAGTATCCAAGACAA...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTCATTATAAAGGCACATaGCACAGTGAGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCHYKGT*HSEGSP
Trigger: TGGAGACCCCTCACTGTGCCATGTGCCTTTATAATG...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCAATACAGTAGCCTTGTaGAGATGCATGTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFNTVAL*RCMSCG
Trigger: CCCACAAGACATGCATCTCCACAAGGCTACTGTATT...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGACCCTCCCAACAACTGTaGGCAGCTGCCGTTTTATGT +
Preference number: 4 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGPSQQL*AAAVLC
Trigger: ACATAAAACGGCAGCTGCCCACAGTTGTTGGGAGGG...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp AGCCATCTACATGCATGCTGCCAGCCAGCAGGAGAATACACCAGGAAGAGTGCAAATACAGCCCAGGCATaGAAAAACATAAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: SHLHACCQPAGEYTRKSANTAQA*KNISHP
Trigger: GGGATGGCTTATGTTTTTCCATGCCTGGGCTGTATT...TGCACTCTTCCTGGTGTATTCTCCTGCTGGCTGGCAGCATGCATGTAGATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGACTGGAAGCATTCATaGCTGGAAAAAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRDWKHS*LEKARK
Trigger: CTTCCTTGCTTTTTCCAGCCATGAATGCTTCCAGTC...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS-3UTR TCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAAAGTCCCTGCACCTTTaGTGCAAGAGTTTGGATATG +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEKSLHL*CKSLDM
Trigger: CATATCCAAACTCTTGCATCAAAGGTGCAGGGACTT...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGTTCTGTCACACACCTaGATCCATATCCAATGGTCA +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEVLSHT*IHIQWS
Trigger: TGACCATTGGATATGGATTCAGGTGTGTGACAGAAC...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGTCTCTCCTTCAGGAGTaGCTGTGGTCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRSLLQE*LWSSEA
Trigger: AGCTTCTGAAGACCACAGTCACTCCTGAAGGAGAGA...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCATCTCTCCTTCAGGAGTaGCTGTGGTCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRASLLQE*LWSSEA
Trigger: AGCTTCTGAAGACCACAGTCACTCCTGAAGGAGAGA...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TCTCTGCAATCCGCCCAGGGAGTTCTTCTGGAAGGTCCAGTTGCACATCCCCTTTTGCTTTACTCCCGTTaGAAAGCCACTGTTACATTT +
Preference number: 4 (lower is better)
Translates to: SLQSAQGVLLEGPVAHPLLLYSR*KATVTF
Trigger: AAATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAA...AAGGGGATGTGCAACTGGACCTTCCAGAAGAACTCCCTGGGCGGATTGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp CACTCACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 4 (lower is better)
Translates to: HSQVQSESSTWASYGHCYCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...ATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAAGGACACATTCGGAATaGTGCAGGTGGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRARTHSE*CRWGSE
Trigger: TTCAGATCCCCACCTGCATCATTCCGAATGTGTCCT...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTACAGAAGCATCCTGTTaGGGACCCATATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCTEASC*GPIFCF
Trigger: GAAACAGAATATGGGTCCTCAACAGGATGCTTCTGT...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp TCCCCAAGGAAGACACTTCCTCAACCGTCTCTGCAATCCGCCCAGGGAGTTCTTTGCCAAATTCTATGTTaGACCTTCCATCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SPRKTLPQPSLQSAQGVLCQILC*TFHLWR
Trigger: TCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCA...AAGAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAAGTGTCTTCCTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAACCGTTTGCTGATCACTaGGTTCTTGCTGAACGTAAT +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEPFADH*VLAERN
Trigger: ATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGG...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGTGGGCCTGGAGATCTTaGCTAAGATGGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: KCIARSNTVALWRCMSCGWAWRS*LRWPHT
Trigger: TGTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCA...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGTGCATTGGGCCTGGAGATCTTaGCTAAGATGGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: PVQTLGGGTHETVSSQVHWAWRS*LRWPHT
Trigger: TGTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCA...ATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GGCCAGGGTCATTTCCTCCTGAGGACTCCAGACAACAAATGTGTCCTATCTGCTCAGCACATTAAATTGTaGTGCCAAAGCACTCACAGG +
Preference number: 4 (lower is better)
Translates to: GQGHFLLRTPDNKCVLSAQHIKL*CQSTHR
Trigger: CCTGTGAGTGCTTTGGCACCACAATTTAATGTGCTG...AGCAGATAGGACACATTTGTTGTCTGGAGTCCTCAGGAGGAAATGACCCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGAAAAAGCAAGGAAGTaGTGCTGGTTGTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLREKARK*CWLLVF
Trigger: AAAGACCAACAACCAGCACCACTTCCTTGCTTTTTC...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS-3UTR CCA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGGAAGCATTCATGGCTaGAAAAAGCAAGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCGSIHG*KKQGSG
Trigger: ACCACTTCCTTGCTTTTTCCAGCCATGAATGCTTCC...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS-3UTR TCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTGGCTGTTGTGATCAATaGCATGGTAAATTGTCAATG +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSGCCDQ*HGKLSM
Trigger: CATTGACAATTTACCATGTCATTGATCACAACAGCC...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCTGTTTCATTGACTTCTaGCAAGATGAAGTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFCFIDF*QDEVGV
Trigger: AACCCCAACTTCATCTTGTCAGAAGTCAATGAAACA...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCTTGCTTTACTCCCGTTaGAAAGCCACTGTTACATTT +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFLLYSR*KATVTF
Trigger: AAATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAA...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGACATTCCCTTCTCTACTaGCTTTGCACCTTCCAACTC +
Preference number: 4 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGHSLLY*LCTFQL
Trigger: GAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATG...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAAGGAAGAGTGCATGCTaGTGGGAACAAGTGTCAACA +
Preference number: 4 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRARKSAC*WEQVST
Trigger: TGTTGACACTTGTTCCCATCAGCATGCACTCTTCCT...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGTCTTTCTATGCAGACTaGTTTCTTTTAGACTCAGCC +
Preference number: 4 (lower is better)
Translates to: TVALWRCMSCGITIAGLRSFYAD*FLLDSA
Trigger: GGCTGAGTCTAAAAGAAATCAGTCTGCATAGAAAGA...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS-3UTR GCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCTGCCAAATTCTATGTTaGACCTTCCATCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFCQILC*TFHLWR
Trigger: TCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCA...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGAGAAGGGTCTCCGCTaGCATGTGGAAGAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQEKGLR*HVEERA
Trigger: AGCCCTTTCTTCCACATGGCAGCGGAGACCCTTCTC...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGACTTCCAACTCCTCATTaGTGTCTTCGAAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGLPTPH*CLRRAG
Trigger: TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAG...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGACAACTGTGGGCAGCTaGCGTTTTATGTGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: VMDREGQSPISPCLKKAWTTVGS*RFMCQD
Trigger: GTCTTGGCACATAAAACGGCAGCTGCCCACAGTTGT...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp CTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTTGCACCTTCCATTCCTCAACCGTCTCTaGAATCCGCCCAGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LLRCINDTFPSLLTLHLPFLNRL*NPPREF
Trigger: GAACTCCCTGGGCGGATTGCAGAGACGGTTGAGGAA...TGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGTTGTCTTGGATACTATaGGAGCAAAACGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRLSWIL*EQNGSP
Trigger: GGGGCTACCGTTTTGCTCCCATAGTATCCAAGACAA...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGACATTATAAAGGCACATaGCACAGTGAGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGHYKGT*HSEGSP
Trigger: TGGAGACCCCTCACTGTGCCATGTGCCTTTATAATG...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTTTCTTGTCATTGATTaGTTGGTTCATCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGFLVID*LVHLPK
Trigger: TTTGGGGAGATGAACCAACCAATCAATGACAAGAAA...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGTACCCGAGGCCCTGTTaGTTTTATGAGTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQYPRPC*FYESVG
Trigger: GCCCACAGACTCATAAAATCAACAGGGCCTCGGGTA...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR TCA 90 bp CCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGTGCATACCAGATTCTCGATGTaGGCAAGTCCCTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: PVQTLGGGTHETVSSQVHTRFSM*ASPCTF
Trigger: AAAGGTGCAGGGACTTGCTCACATCGAGAATCTGGT...ATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGTCCGGGAGGTCTTTGTaGATGTACGCTACTGCATAC +
Preference number: 4 (lower is better)
Translates to: KCIARSNTVALWRCMSCGSGRSL*MYATAY
Trigger: GTATGCAGTAGCGTACATTCACAAAGACCTCCCGGA...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTGTTGTGATCAATaGCATGGTAAATTGTCAATG +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEGCCDQ*HGKLSM
Trigger: CATTGACAATTTACCATGTCATTGATCACAACAGCC...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAAGGTGGAGGAACACATaGAACTGTTTCTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGRWRNT*NCFFSG
Trigger: ACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCT...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGAGGACACATTCGGAATaGTGCAGGTGGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: KCIARSNTVALWRCMSCGRTHSE*CRWGSE
Trigger: TTCAGATCCCCACCTGCATCATTCCGAATGTGTCCT...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTGAAGGGGCTACATCATaGCAGTGGGCCAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIAREGATS*QWASRE
Trigger: TTCTCTGCTGGCCCACTGTCATGATGTAGCCCCTTC...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCAAAGTCCTCATGGATTaGTGGAGTAAATGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFKVLMD*WSKCRN
Trigger: GTTTCTACATTTACTCCAGCAATCCATGAGGACTTT...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR GCA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAATGCCAAATTCTATGTTaGACCTTCCATCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFECQILC*TFHLWR
Trigger: TCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCA...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGACTGTGCCTCCACATTaGCAAATTCTATGTTGCACC +
Preference number: 4 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRTVPPH*QILCCT
Trigger: GGTGCAACATAGAATTTGGCAATGTGGAGGCACAGT...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGTGAATGTACGCTACTaGATACCACAGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRAVNVRY*IPQETK
Trigger: TTTGGTCTCCTGTGGTATGCAGTAGCGTACATTCAC...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCATCAAGATTCTAGTGTaGAGATTTAGCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFIKILV*RFSLCL
Trigger: TAGACAGAGGCTAAATCTGCACACTAGAATCTTGAT...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGAGCTGCCGTTTTATGTaGCAAGACTCACACTGGAGA +
Preference number: 4 (lower is better)
Translates to: VMDREGQSPISPCLKKAWSCRFM*QDSHWR
Trigger: TCTCCAGTGTGAGTCTTGGCACATAAAACGGCAGCT...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGCATCTACATGCATGCTaGCAGCCAGCAGGAGAATAC +
Preference number: 4 (lower is better)
Translates to: KCIARSNTVALWRCMSCGHLHAC*QPAGEY
Trigger: GTATTCTCCTGCTGGCTGGCAGCATGCATGTAGATG...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp GACCAGAGTGGTGCATGGATCTGTACAAATACAGCCCAGGCATGGAAAAACATAGCAGAAAAATGGCAGTaGCACACTGTTCTGTCACAC +
Preference number: 4 (lower is better)
Translates to: DQSGAWICTNTAQAWKNIAEKWQ*HTVLSH
Trigger: GTGTGACAGAACAGTGTGCCACTGCCATTTTTCTGC...TATGTTTTTCCATGCCTGGGCTGTATTTGTACAGATCCATGCACCACTCTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAATACAGTAGCCTTGTaGAGATGCATGTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRNTVAL*RCMSCG
Trigger: CCCACAAGACATGCATCTCCACAAGGCTACTGTATT...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTAACACCCTGATCTCATaGATTGCTGGAGTAAATGTA +
Preference number: 4 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCNTLIS*IAGVNV
Trigger: TACATTTACTCCAGCAATCCATGAGATCAGGGTGTT...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp CACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATGGCCTTAACTCTTAAATATTaGAGCTTGAGCCAACCTAAG +
Preference number: 4 (lower is better)
Translates to: HRYRVRVPHGPAMATVMALTLKY*SLSQPK
Trigger: CTTAGGTTGGCTCAAGCTCCAATATTTAAGAGTTAA...GGCCATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGTTTTGTATCTCCACTTaGGGTCAAGTACCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: VMDREGQSPISPCLKKAWFCIST*GQVPLS
Trigger: GGACAACGGTACTTGACCTCAAGTGGAGATACAAAA...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGGGCTGTTGTGATCAATaGCATGGTAAATTGTCAATG +
Preference number: 4 (lower is better)
Translates to: EPSISWSLLGRWAVRERKGCCDQ*HGKLSM
Trigger: CATTGACAATTTACCATGTCATTGATCACAACAGCC...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGTTGCTTTACTCCCGTTaGAAAGCCACTGTTACATTT +
Preference number: 4 (lower is better)
Translates to: EPSISWSLLGRWAVRERKLLYSR*KATVTF
Trigger: AAATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAA...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGGTACCCCTAAATTGTTaGCTGCTTCATAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: EPSISWSLLGRWAVRERKVPLNC*LLHNAS
Trigger: AGAAGCATTATGAAGCAGTCAACAATTTAGGGGTAC...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGACATAGTAACATTCTaGCTGTGGGGCTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQDIVTF*LWGSIP
Trigger: TGGGATGGAGCCCCACAGTCAGAATGTTACTATGTC...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CTTTACTACTTGAGCACCCATTCCCTTGTTACCCCCTTTCTTAAAATGCACAGGAGGGTCATTTCCTCCTaGGGACTCCAGACAACAAAT +
Preference number: 4 (lower is better)
Translates to: LYYLSTHSLVTPFLKMHRRVISS*GLQTTN
Trigger: ATTTGTTGTCTGGAGTCCTCAGGAGGAAATGACCCT...CCTGTGCATTTTAAGAAAGGGGGTAACAAGGGAATGGGTGCTCAAGTAGTAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCATTAAATATTGGAGCTTaGGCCAACCTAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRALNIGA*ANLSPG
Trigger: TCCTGGACTTAGGTTGGCTCAAGCTCCAATATTTAA...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp CCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGTGCATACTAATTCAAAGTCCTaGTGGAGAAGGGTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: PVQTLGGGTHETVSSQVHTNSKS*WRRVSA
Trigger: AGCGGAGACCCTTCTCCAGCAGGACTTTGAATTAGT...ATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGTGGTGGACTCCACTGTaGCATCTAAAAACACCACTA +
Preference number: 4 (lower is better)
Translates to: VMDREGQSPISPCLKKAWWWTPL*HLKTPL
Trigger: TAGTGGTGTTTTTAGATGGCACAGTGGAGTCCACCA...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTGTGGGATCACAATTaGGGGGCTCAGGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARLWDHN*GAQGSL
Trigger: CAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAA...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCTTGTGGGATCACAATTaGGGGGCTCAGGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSLWDHN*GAQGSL
Trigger: CAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAA...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCAGCCATCTACATGCATaGTGCCAGCCAGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSSHLHA*CQPAGE
Trigger: TTCTCCTGCTGGCTGGCAGCATGCATGTAGATGGCT...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTAAAAACTCATTTTCTTaGTCTCCAAGAAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSKNSFS*SPRKQP
Trigger: TGGTTGCTTTCTTGGAGACCAAGAAAATGAGTTTTT...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGTGCATGCAGAAAAATGGCAGTaGCACACTGTTCTGTCACAC +
Preference number: 4 (lower is better)
Translates to: PVQTLGGGTHETVSSQVHAEKWQ*HTVLSH
Trigger: GTGTGACAGAACAGTGTGCCACTGCCATTTTTCTGC...ATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTAATTCAAAGTCCTGCTaGAGAAGGGTCTCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCNSKSC*RRVSAA
Trigger: GGCAGCGGAGACCCTTCTCCAGCAGGACTTTGAATT...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGAGATGCATGTCTTGTaGGATCACAATTGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQEMHVL*DHNCGA
Trigger: AGCCCCGCAATTGTGATCCCACAAGACATGCATCTC...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GACCAGAGTGGTGCATGGATCTGTACAAATACAGCCCAGGCATGGAAAAACATATCCCTTTTAGGAAGATaGGCTGTCAGGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: DQSGAWICTNTAQAWKNISLLGR*AVRERK
Trigger: CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGA...TATGTTTTTCCATGCCTGGGCTGTATTTGTACAGATCCATGCACCACTCTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTAGAGAAGAAACCTCATaGATTGCTGGAGTAAATGTA +
Preference number: 4 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCREETS*IAGVNV
Trigger: TACATTTACTCCAGCAATCCATGAGGTTTCTTCTCT...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392666.6
CDS-3UTR CCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTGCCAAGACTCACACTaGAGAGGCGTGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KRAPMSSIHQFHINALHVCQDSH*RGVMEL
Trigger: CAGCTCCATCACGCCTCTCCAGTGTGAGTCTTGGCA...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGAAGTCCCTGCACCTTTaGTGCAAGAGTTTGGATATG +
Preference number: 4 (lower is better)
Translates to: KCIARSNTVALWRCMSCGKSLHL*CKSLDM
Trigger: CATATCCAAACTCTTGCATCAAAGGTGCAGGGACTT...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGCAGTCATTAGGAAGCTaGACAAATGTTGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRQSLGS*TNVEKS
Trigger: GGATTTCTCAACATTTGTTCAGCTTCCTAATGACTG...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR TCA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGTTTTGTATCTCCACTTaGGGTCAAGTACCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: KCIARSNTVALWRCMSCGFCIST*GQVPLS
Trigger: GGACAACGGTACTTGACCTCAAGTGGAGATACAAAA...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGTGCATTTTTGTATCTCCACTTaGGGTCAAGTACCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: PVQTLGGGTHETVSSQVHFCIST*GQVPLS
Trigger: GGACAACGGTACTTGACCTCAAGTGGAGATACAAAA...ATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCCGGGAGGTCTTTGTaGATGTACGCTACTGCATAC +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARSGRSL*MYATAY
Trigger: GTATGCAGTAGCGTACATTCACAAAGACCTCCCGGA...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTTCCGGGAGGTCTTTGTaGATGTACGCTACTGCATAC +
Preference number: 4 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSSGRSL*MYATAY
Trigger: GTATGCAGTAGCGTACATTCACAAAGACCTCCCGGA...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGCTGTTGTGATCAATaGCATGGTAAATTGTCAATG +
Preference number: 4 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRAGCCDQ*HGKLSM
Trigger: CATTGACAATTTACCATGTCATTGATCACAACAGCC...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCATGTTTCATTGACTTCTaGCAAGATGAAGTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRACFIDF*QDEVGV
Trigger: AACCCCAACTTCATCTTGTCAGAAGTCAATGAAACA...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp GACCAGAGTGGTGCATGGATCTGTACAAATACAGCCCAGGCATGGAAAAACATACAAGCTTGTGATACCTaGTTTCTTTTTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: DQSGAWICTNTAQAWKNIQACDT*FLFPVS
Trigger: GCTGACAGGAAAAAGAAATCAGGTATCACAAGCTTG...TATGTTTTTCCATGCCTGGGCTGTATTTGTACAGATCCATGCACCACTCTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGGTGACCAGCAAGAGCTaGTTGGTTTGGGATTCCACC +
Preference number: 4 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKVTSKS*LVWDST
Trigger: GGTGGAATCCCAAACCAAGCAGCTCTTGCTGGTCAC...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR GCA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGTGCCAAATTCTATGTTaGACCTTCCATCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRCQILC*TFHLWR
Trigger: TCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCA...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCGAGAAGGGTCTCCGCTaGCATGTGGAAGAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISEKGLR*HVEERA
Trigger: AGCCCTTTCTTCCACATGGCAGCGGAGACCCTTCTC...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTTGCACCTTCCAAGGGAAAGATCCCCGTaGTATTCACAGAAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LLRCINDTFPSLLTLHLPRERSP*YSQKHP
Trigger: AGGATGCTTCTGTGAATAGCACGGGGATCTTTCCCT...TGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGGATTTTATGAGTCTGTaGGCCAGCTCAGACCGGCTG +
Preference number: 4 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKDFMSL*ASSDRL
Trigger: CAGCCGGTCTGAGCTGGCCCACAGACTCATAAAATC...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTGGGATTCCACCTGTaGGGCTCAGAACTTGTCACA +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARLGFHL*GSELVT
Trigger: TGTGACAAGTTCTGAGCCCCACAGGTGGAATCCCAA...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CCA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTTGGGATTCCACCTGTaGGGCTCAGAACTTGTCACA +
Preference number: 4 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCLGFHL*GSELVT
Trigger: TGTGACAAGTTCTGAGCCCCACAGGTGGAATCCCAA...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CCA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTTGGGCCTGGAGATCTTaGCTAAGATGGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFWAWRS*LRWPHT
Trigger: TGTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCA...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGGTCTTGCTAAAGTTATaGAAATCCACTCGGTATTTC +
Preference number: 4 (lower is better)
Translates to: EPSISWSLLGRWAVRERKVLLKL*KSTRYF
Trigger: GAAATACCGAGTGGATTTCCATAACTTTAGCAAGAC...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCGAGCCTTCCATAAGCTaGTCCCTTTTAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLEPSIS*SLLGRW
Trigger: CCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTGCCCTGTTGATTTTATaGGTCTGTGGGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFALLIL*VCGPAQ
Trigger: CTGAGCTGGCCCACAGACTCATAAAATCAACAGGGC...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR TCA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTTCCGGGAGGTCTTTGTaGATGTACGCTACTGCATAC +
Preference number: 4 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFSGRSL*MYATAY
Trigger: GTATGCAGTAGCGTACATTCACAAAGACCTCCCGGA...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp GAGTGCATGCTGATGGGAACAAGTGTCAACACAGTTTCCCTCCAGTTTATGAAGTGTTTCATTGACTTCTaGCAAGATGAAGTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ECMLMGTSVNTVSLQFMKCFIDF*QDEVGV
Trigger: AACCCCAACTTCATCTTGTCAGAAGTCAATGAAACA...CTTCATAAACTGGAGGGAAACTGTGTTGACACTTGTTCCCATCAGCATGCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCATTCCCTTCTCTACTaGCTTTGCACCTTCCAACTC +
Preference number: 4 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSHSLLY*LCTFQL
Trigger: GAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATG...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTGACATAGTAACATTCTaGCTGTGGGGCTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: KRAPMSSIHQFHINALHVDIVTF*LWGSIP
Trigger: TGGGATGGAGCCCCACAGTCAGAATGTTACTATGTC...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTTTCTGTCAACACCCTaGTCTCATGGATTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCFLSTP*SHGLLE
Trigger: CTCCAGCAATCCATGAGATCAGGGTGTTGACAGAAA...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCACTGTGCCTCCACATTaGCAAATTCTATGTTGCACC +
Preference number: 4 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLTVPPH*QILCCT
Trigger: GGTGCAACATAGAATTTGGCAATGTGGAGGCACAGT...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGCCGTTTGCTGATCACTaGGTTCTTGCTGAACGTAAT +
Preference number: 4 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQPFADH*VLAERN
Trigger: ATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGG...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCCCGTTTGCTGATCACTaGGTTCTTGCTGAACGTAAT +
Preference number: 4 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLPFADH*VLAERN
Trigger: ATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGG...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTACTAATTCAAAGTCCTaGTGGAGAAGGGTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCTNSKS*WRRVSA
Trigger: AGCGGAGACCCTTCTCCAGCAGGACTTTGAATTAGT...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGTGGTGGACTCCACTGTaGCATCTAAAAACACCACTA +
Preference number: 4 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQWWTPL*HLKTPL
Trigger: TAGTGGTGTTTTTAGATGGCACAGTGGAGTCCACCA...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTTTGTGGGATCACAATTaGGGGGCTCAGGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFLWDHN*GAQGSL
Trigger: CAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAA...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTCTTCCAACTCCTCATTaGTGTCTTCGAAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCLPTPH*CLRRAG
Trigger: TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAG...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTCTTCCAACTCCTCATTaGTGTCTTCGAAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARLPTPH*CLRRAG
Trigger: TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAG...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTGCCACTGACAAGGTGTaGAACCCTAAAACCATCAGA +
Preference number: 4 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSATDKV*NPKTIR
Trigger: TCTGATGGTTTTAGGGTTGCACACCTTGTCAGTGGC...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTGTCTTGGATACTATaGGAGCAAAACGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARLSWIL*EQNGSP
Trigger: GGGGCTACCGTTTTGCTCCCATAGTATCCAAGACAA...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTCATTATAAAGGCACATaGCACAGTGAGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSHYKGT*HSEGSP
Trigger: TGGAGACCCCTCACTGTGCCATGTGCCTTTATAATG...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGGAGATGCATGTCTTGTaGGATCACAATTGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKEMHVL*DHNCGA
Trigger: AGCCCCGCAATTGTGATCCCACAAGACATGCATCTC...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGATTTCTTGTCATTGATTaGTTGGTTCATCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGFLVID*LVHLPK
Trigger: TTTGGGGAGATGAACCAACCAATCAATGACAAGAAA...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTTGCACCTTCCATCCCTTTTAGGAAGATaGGCTGTCAGGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLRCINDTFPSLLTLHLPSLLGR*AVRERK
Trigger: CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGA...TGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTGAGCCTTCCATAAGCTaGTCCCTTTTAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSEPSIS*SLLGRW
Trigger: CCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTGACCAGAGTGGTGCATaGATCTGTACAAATACAGCC +
Preference number: 4 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSDQSGA*ICTNTA
Trigger: GGCTGTATTTGTACAGATCCATGCACCACTCTGGTC...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCAGTGAGAGTTCCACATaGGCCAGCTATGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISSESST*ASYGHC
Trigger: ACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACT...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTGTAGGCGACAGTCAGTaGACTGACGCTAATTTGTGT +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARVGDSQ*TDANLC
Trigger: ACACAAATTAGCGTCAGTCCACTGACTGTCGCCTAC...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS-3UTR CCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTGCAAGGAAGTGGTGCTaGTTGTTGGTCTTTCTATGC +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARARKWC*LLVFLC
Trigger: GCATAGAAAGACCAACAACCAGCACCACTTCCTTGC...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS-3UTR TCA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGACCAGATTCTCGATGTaGGCAAGTCCCTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLTRFSM*ASPCTF
Trigger: AAAGGTGCAGGGACTTGCTCACATCGAGAATCTGGT...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTGTTCTGTCACACACCTaGATCCATATCCAATGGTCA +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARVLSHT*IHIQWS
Trigger: TGACCATTGGATATGGATTCAGGTGTGTGACAGAAC...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTAGGTGGAGGAACACATaGAACTGTTTCTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARRWRNT*NCFFSG
Trigger: ACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCT...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGAGGACACATTCGGAATaGTGCAGGTGGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLRTHSE*CRWGSE
Trigger: TTCAGATCCCCACCTGCATCATTCCGAATGTGTCCT...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTGGAATGGATTGCTTATaGCCATCTCACTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFGMDCL*PSHFQP
Trigger: TGGCTGGAAGTGAGATGGTCATAAGCAATCCATTCC...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCTTTCTGTCAACACCCTaGTCTGTTCAGAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSFLSTP*SVQSRD
Trigger: ATCTCTGCTCTGAACAGATCAGGGTGTTGACAGAAA...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440599.6
CDS-3UTR GCA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGTGCCAAATTCTATGTTaGACCTTCCATCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KCIARSNTVALWRCMSCGCQILC*TFHLWR
Trigger: TCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCA...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTACTGTGCCTCCACATTaGCAAATTCTATGTTGCACC +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARTVPPH*QILCCT
Trigger: GGTGCAACATAGAATTTGGCAATGTGGAGGCACAGT...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTACTGTGCCTCCACATTaGCAAATTCTATGTTGCACC +
Preference number: 4 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSTVPPH*QILCCT
Trigger: GGTGCAACATAGAATTTGGCAATGTGGAGGCACAGT...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTACTAATTCAAAGTCCTaGTGGAGAAGGGTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: KRAPMSSIHQFHINALHVTNSKS*WRRVSA
Trigger: AGCGGAGACCCTTCTCCAGCAGGACTTTGAATTAGT...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCATTATAAAGGCACATaGCACAGTGAGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KRAPMSSIHQFHINALHVHYKGT*HSEGSP
Trigger: TGGAGACCCCTCACTGTGCCATGTGCCTTTATAATG...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGGAGATGCATGTCTTGTaGGATCACAATTGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLEMHVL*DHNCGA
Trigger: AGCCCCGCAATTGTGATCCCACAAGACATGCATCTC...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTACTATGGCCACTGTTATaGCCACTGACAAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SLCKRFLVIDWLVHLPKLLWPLL*PLTRCA
Trigger: TGCACACCTTGTCAGTGGCCATAACAGTGGCCATAG...TAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
3UTR CAA 72 bp ACAACCTCCCAAATCTTAACTCTTAAATATTGGAGCTaGAGCCAACCTAAGTCCAGGAAGATTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: TTSQILTLKYWS*SQPKSRKIQPG
Trigger: TCCTGGTTGAATCTTCCTGGACTTAGGTTGGCTCAAGCTCCAATATTTAAGAGTTAAGATTTGGGAGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR TCA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCACCAGATTCTCGATGTaGGCAAGTCCCTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLTRFSM*ASPCTF
Trigger: AAAGGTGCAGGGACTTGCTCACATCGAGAATCTGGT...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCTGTTTCATTGACTTCTaGCAAGATGAAGTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLCFIDF*QDEVGV
Trigger: AACCCCAACTTCATCTTGTCAGAAGTCAATGAAACA...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGTTGCTTTACTCCCGTTaGAAAGCCACTGTTACATTT +
Preference number: 4 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQLLYSR*KATVTF
Trigger: AAATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAA...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGTACCCCTAAATTGTTaGCTGCTTCATAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQVPLNC*LLHNAS
Trigger: AGAAGCATTATGAAGCAGTCAACAATTTAGGGGTAC...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCATTCCCTTCTCTACTaGCTTTGCACCTTCCAACTC +
Preference number: 4 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISHSLLY*LCTFQL
Trigger: GAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATG...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCCGTTTGCTGATCACTaGGTTCTTGCTGAACGTAAT +
Preference number: 4 (lower is better)
Translates to: KRAPMSSIHQFHINALHVPFADH*VLAERN
Trigger: ATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGG...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp TCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAACTAATTCAAAGTCCTaGTGGAGAAGGGTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: SLCKRFLVIDWLVHLPKLTNSKS*WRRVSA
Trigger: AGCGGAGACCCTTCTCCAGCAGGACTTTGAATTAGT...TAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp TCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTACTTCCAACTCCTCATTaGTGTCTTCGAAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLCKRFLVIDWLVHLPKLLPTPH*CLRRAG
Trigger: TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAG...TAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTCACATTAAATTGTGGTaGCAAAGCACTCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARHIKLW*QSTHRY
Trigger: GTACCTGTGAGTGCTTTGGCACCACAATTTAATGTG...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp CCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGTGCATGTCCTCATGGATTGCTaGAGTAAATGTAGAAACAAA +
Preference number: 4 (lower is better)
Translates to: PVQTLGGGTHETVSSQVHVLMDC*SKCRNK
Trigger: TTTGTTTCTACATTTACTCCAGCAATCCATGAGGAC...ATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CCA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGTGCACCTTCCATCTTTaGAGACTAGCCTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKCTFHL*RLALLF
Trigger: AAAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCA...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTGCAGAAAAATGGCAGTaGCACACTGTTCTGTCACAC +
Preference number: 4 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFAEKWQ*HTVLSH
Trigger: GTGTGACAGAACAGTGTGCCACTGCCATTTTTCTGC...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CTTTACTACTTGAGCACCCATTCCCTTGTTACCCCCTTTCTTAAAATGCACAGGGTCTTGCTAAAGTTATaGAAATCCACTCGGTATTTC +
Preference number: 4 (lower is better)
Translates to: LYYLSTHSLVTPFLKMHRVLLKL*KSTRYF
Trigger: GAAATACCGAGTGGATTTCCATAACTTTAGCAAGAC...CCTGTGCATTTTAAGAAAGGGGGTAACAAGGGAATGGGTGCTCAAGTAGTAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTAATACAGTAGCCTTGTaGAGATGCATGTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFNTVAL*RCMSCG
Trigger: CCCACAAGACATGCATCTCCACAAGGCTACTGTATT...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGAGCCTTCCATAAGCTaGTCCCTTTTAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLEPSIS*SLLGRW
Trigger: CCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCGTTCTGTCACACACCTaGATCCATATCCAATGGTCA +
Preference number: 4 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISVLSHT*IHIQWS
Trigger: TGACCATTGGATATGGATTCAGGTGTGTGACAGAAC...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTGTTTCATTGACTTCTaGCAAGATGAAGTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCCFIDF*QDEVGV
Trigger: AACCCCAACTTCATCTTGTCAGAAGTCAATGAAACA...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTTGCTTTACTCCCGTTaGAAAGCCACTGTTACATTT +
Preference number: 4 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCLLYSR*KATVTF
Trigger: AAATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAA...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAAGGTGGAGGAACACATaGAACTGTTTCTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SLCKRFLVIDWLVHLPKLRWRNT*NCFFSG
Trigger: ACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCT...TAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTTTCTGTCAACACCCTaGTCAACGTGTCAAACACAT +
Preference number: 4 (lower is better)
Translates to: KRAPMSSIHQFHINALHVFLSTP*STCQTH
Trigger: ATGTGTTTGACACGTTGATCAGGGTGTTGACAGAAA...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS-3UTR GCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCGTGAATGTACGCTACTaGATACCACAGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISVNVRY*IPQETK
Trigger: TTTGGTCTCCTGTGGTATGCAGTAGCGTACATTCAC...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTTGGTGGACTCCACTGTaGCATCTAAAAACACCACTA +
Preference number: 4 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFWWTPL*HLKTPL
Trigger: TAGTGGTGTTTTTAGATGGCACAGTGGAGTCCACCA...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCTGGTGGACTCCACTGTaGCATCTAAAAACACCACTA +
Preference number: 4 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISWWTPL*HLKTPL
Trigger: TAGTGGTGTTTTTAGATGGCACAGTGGAGTCCACCA...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTATGTATAAGTAGATCTTaGGGTGACCAGCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLCKRFLVIDWLVHLPKLCISRS*GDQQEL
Trigger: CAGCTCTTGCTGGTCACCCCAAGATCTACTTATACA...TAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CCA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGTGCACCTTCCATCTTTaGAGACTAGCCTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLCTFHL*RLALLF
Trigger: AAAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCA...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCGTCTTGCTAAAGTTATaGAAATCCACTCGGTATTTC +
Preference number: 4 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLVLLKL*KSTRYF
Trigger: GAAATACCGAGTGGATTTCCATAACTTTAGCAAGAC...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGTCCCTTTTAGGAAGATaGGCTGTCAGGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLSLLGR*AVRERK
Trigger: CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGA...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTTCCCTTTTAGGAAGATaGGCTGTCAGGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFSLLGR*AVRERK
Trigger: CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGA...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCGAGCCTTCCATAAGCTaGTCCCTTTTAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLEPSIS*SLLGRW
Trigger: CCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCTTTTGTATCTCCACTTaGGGTCAAGTACCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLFCIST*GQVPLS
Trigger: GGACAACGGTACTTGACCTCAAGTGGAGATACAAAA...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTGGCTGTTGTGATCAATaGCATGGTAAATTGTCAATG +
Preference number: 4 (lower is better)
Translates to: KRAPMSSIHQFHINALHVGCCDQ*HGKLSM
Trigger: CATTGACAATTTACCATGTCATTGATCACAACAGCC...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCTGTGCTGGTAGACTTTaGAGGCTCTCATCCTACTTT +
Preference number: 4 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLCAGRL*RLSSYF
Trigger: AAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACA...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTTTCTCTTTACTACTTaGGCACCCATTCCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: KRAPMSSIHQFHINALHVFLFTT*APIPLL
Trigger: TAACAAGGGAATGGGTGCTCAAGTAGTAAAGAGAAA...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR GCA 90 bp CTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTTGCACCTTCCAATCCATTCAGAATGGTaGAAAATTCCTATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLRCINDTFPSLLTLHLPIHSEW*KIPIKS
Trigger: GGACTTTATAGGAATTTTGCACCATTCTGAATGGAT...TGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR GCA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCACTGTGCCTCCACATTaGCAAATTCTATGTTGCACC +
Preference number: 4 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLTVPPH*QILCCT
Trigger: GGTGCAACATAGAATTTGGCAATGTGGAGGCACAGT...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCGTGAATGTACGCTACTaGATACCACAGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLVNVRY*IPQETK
Trigger: TTTGGTCTCCTGTGGTATGCAGTAGCGTACATTCAC...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCCTGATCTCATGGATTaGTGGAGTAAATGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKPDLMD*WSKCRN
Trigger: GTTTCTACATTTACTCCAGCAATCCATGAGATCAGG...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CCA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCAAAAACTCATTTTCTTaGTCTCCAAGAAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLKNSFS*SPRKQP
Trigger: TGGTTGCTTTCTTGGAGACCAAGAAAATGAGTTTTT...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTGTCTTGCTAAAGTTATaGAAATCCACTCGGTATTTC +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARVLLKL*KSTRYF
Trigger: GAAATACCGAGTGGATTTCCATAACTTTAGCAAGAC...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCAATACAGTAGCCTTGTaGAGATGCATGTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLNTVAL*RCMSCG
Trigger: CCCACAAGACATGCATCTCCACAAGGCTACTGTATT...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTTCTTGTCATTGATTaGTTGGTTCATCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARFLVID*LVHLPK
Trigger: TTTGGGGAGATGAACCAACCAATCAATGACAAGAAA...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTTTTCTTGTCATTGATTaGTTGGTTCATCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSFLVID*LVHLPK
Trigger: TTTGGGGAGATGAACCAACCAATCAATGACAAGAAA...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR TCA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGCAGTCATTAGGAAGCTaGACAAATGTTGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLQSLGS*TNVEKS
Trigger: GGATTTCTCAACATTTGTTCAGCTTCCTAATGACTG...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR TCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCGTACCCCTAAATTGTTaGCTGCTTCATAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISVPLNC*LLHNAS
Trigger: AGAAGCATTATGAAGCAGTCAACAATTTAGGGGTAC...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTATCAAGATTCTAGTGTaGAGATTTAGCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: KRAPMSSIHQFHINALHVIKILV*RFSLCL
Trigger: TAGACAGAGGCTAAATCTGCACACTAGAATCTTGAT...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTATCAAGATTCTAGTGTaGAGATTTAGCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFIKILV*RFSLCL
Trigger: TAGACAGAGGCTAAATCTGCACACTAGAATCTTGAT...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR GCA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTAGAAACCTCATGGATTaGTGGAGTAAATGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFRNLMD*WSKCRN
Trigger: GTTTCTACATTTACTCCAGCAATCCATGAGGTTTCT...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392666.6
CDS-3UTR CCA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCCTATAAAGTCCTCATaGATTGCTGGAGTAAATGTA +
Preference number: 4 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFPIKSS*IAGVNV
Trigger: TACATTTACTCCAGCAATCCATGAGGACTTTATAGG...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CCA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTAACCTCATGGATTGCTaGAGTAAATGTAGAAACAAA +
Preference number: 4 (lower is better)
Translates to: QESTYVFHTPVSYKCIARNLMDC*SKCRNK
Trigger: TTTGTTTCTACATTTACTCCAGCAATCCATGAGGTT...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392666.6
CDS-3UTR GCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCAAAGTCCTCATGGATTaGTGGAGTAAATGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISKVLMD*WSKCRN
Trigger: GTTTCTACATTTACTCCAGCAATCCATGAGGACTTT...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CCA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCGTCCTCATGGATTGCTaGAGTAAATGTAGAAACAAA +
Preference number: 4 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISVLMDC*SKCRNK
Trigger: TTTGTTTCTACATTTACTCCAGCAATCCATGAGGAC...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CCA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGCCTATAAAGTCCTCATaGATTGCTGGAGTAAATGTA +
Preference number: 4 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLPIKSS*IAGVNV
Trigger: TACATTTACTCCAGCAATCCATGAGGACTTTATAGG...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR GCA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATCCATTCAGAATGGTaGAAAATTCCTATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLIHSEW*KIPIKS
Trigger: GGACTTTATAGGAATTTTGCACCATTCTGAATGGAT...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CCA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGAAAAACTCATTTTCTTaGTCTCCAAGAAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLKNSFS*SPRKQP
Trigger: TGGTTGCTTTCTTGGAGACCAAGAAAATGAGTTTTT...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CCA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGTGTCTTAAAAAGGCATaGCAACACAAAAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLCLKKA*QHKRIF
Trigger: AAAGATCCTTTTGTGTTGCCATGCCTTTTTAAGACA...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS CCA 90 bp TCTTGGGGTGACCAGCAAGAGCTGCTTGGTTTGGGATTCCACCTGTaGGGCTCAGAACTTGTCACACTGTCTTTGTCAGGGCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: SWGDQQELLGLGFHL*GSELVTLSLSGPRM
Trigger: CATCCTGGGCCCTGACAAAGACAGTGTGACAAGTTCTGAGCCCCACAGGTGGAATCCCAAACCAAGCAGCTCTTGCTGGTCACCCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324036.7
ENST00000392666.6
ENST00000531562.1
CDS-3UTR CAA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGTTGGGCCTGGAGATCTaGGCTAAGATGGCCCCACAC +
Preference number: 5 (lower is better)
Translates to: TVALWRCMSCGITIAGLRLGLEI*AKMAPH
Trigger: GTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCAA...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATGGCCATAGGATGTCCGGACTaGGCAGGTAGCACTGGTGGA +
Preference number: 5 (lower is better)
Translates to: HRYRVRVPHGPAMATVMAIGCPD*AGSTGG
Trigger: TCCACCAGTGCTACCTGCCAAGTCCGGACATCCTAT...GGCCATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp CACAGGTACAGAGTGAGAGTTCCACATGGGCCAGCTATGGCCACTGTTATGGCCCTTGTGGGATCACAATaGCGGGGCTCAGGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: HRYRVRVPHGPAMATVMALVGSQ*RGSGVF
Trigger: AAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG...GGCCATAACAGTGGCCATAGCTGGCCCATGTGGAACTCTCACTCTGTACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTAGCTTCCCTCCCCGTTaGCTGATCACTGCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSSFPPR*LITAFL
Trigger: CAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCT...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGCTTGTGGGATCACAATaGCGGGGCTCAGGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: TVALWRCMSCGITIAGLRLVGSQ*RGSGVF
Trigger: AAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCGTCTTGGCACGTTTTTaGGGCCTGGAGATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFVLARF*GLEILA
Trigger: AGCCAAGATCTCCAGGCCCAAAAAACGTGCCAAGAC...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAATAGGATGTCCGGACTaGGCAGGTAGCACTGGTGGA +
Preference number: 5 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEIGCPD*AGSTGG
Trigger: TCCACCAGTGCTACCTGCCAAGTCCGGACATCCTAT...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGTGGAGATGCATGTCTaGTGGGATCACAATTGCGGG +
Preference number: 5 (lower is better)
Translates to: TVALWRCMSCGITIAGLRVEMHV*WDHNCG
Trigger: CCCGCAATTGTGATCCCACAAGACATGCATCTCCAC...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCCCTTCCAACTCCTCATaGCTGTCTTCGAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFPSNSS*LSSKSR
Trigger: CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGG...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGCTTGTCACACTGTCTTaGTCAGGGCCCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRLVTLS*SGPRMG
Trigger: CCCCATCCTGGGCCCTGACAAAGACAGTGTGACAAG...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CAA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGACAAGAGCTGCTTGGTTaGGGATTCCACCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGQELLG*GFHLWG
Trigger: GCCCCACAGGTGGAATCCCAAACCAAGCAGCTCTTG...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CAA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTTGCACCTTCCATCTTaGGAGACTAGCCTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGLHLPS*ETSLAL
Trigger: AAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAA...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGAGCTTCCCTCCCCGTTaGCTGATCACTGCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: EPSISWSLLGRWAVRERKSFPPR*LITAFL
Trigger: CAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCT...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAACCTTCCAACTCCTCATaGCTGTCTTCGAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEPSNSS*LSSKSR
Trigger: CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGG...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS TCA 90 bp CAAGAAAGCAACCAGATTCTCGATGTGAGCAAGTCCCTGCACCTTTaGTGCAAGAGTTTGGATATGCTAGGTGAGGGTACCCGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: QESNQILDVSKSLHL*CKSLDMLGEGTRGP
Trigger: AGGGCCTCGGGTACCCTCACCTAGCATATCCAAACTCTTGCATCAAAGGTGCAGGGACTTGCTCACATCGAGAATCTGGTTGCTTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CAA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGCTTTGGAGACTAGCCTaGCTCTTTGCCGAGAATGCC +
Preference number: 5 (lower is better)
Translates to: EPSISWSLLGRWAVRERKLWRLA*LFAENA
Trigger: GGCATTCTCGGCAAAGAGCAAGGCTAGTCTCCAAAG...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGACTGTGCCTCCACATaGCCAAATTCTATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: TVALWRCMSCGITIAGLRDCAST*PNSMLH
Trigger: GTGCAACATAGAATTTGGCAATGTGGAGGCACAGTC...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCTGATCACTGCGTTCTaGCTGAACGTAATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSLITAF*LNVMVL
Trigger: CAAGACCATTACGTTCAGCAAGAACGCAGTGATCAG...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAATAGGATGTCCGGACTaGGCAGGTAGCACTGGTGGA +
Preference number: 5 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGIGCPD*AGSTGG
Trigger: TCCACCAGTGCTACCTGCCAAGTCCGGACATCCTAT...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGACTCACACTGGAGAGGCGTGATGGAGCTGTACCGGAAGGGGTGTGTCTGTGGTTTGCTTTACTCCCGTaGAAAAGCCACTGTTACATT +
Preference number: 5 (lower is better)
Translates to: RLTLERRDGAVPEGVCLWFALLP*KSHCYI
Trigger: AATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAAA...CCACAGACACACCCCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS GCA 90 bp GGCAGAAGGATGGAATTCCGGGAGGTCTTTGTGAATGTACGCTACTaGATACCACAGGAGACCAAAGAAAAACCAACTCCCCAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: GRRMEFREVFVNVRY*IPQETKEKPTPQEG
Trigger: GCCTTCTTGGGGAGTTGGTTTTTCTTTGGTCTCCTGTGGTATGCAGTAGCGTACATTCACAAAGACCTCCCGGAATTCCATCCTTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGCAAGAGCTGCTTGGTTaGGGATTCCACCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: KCIARSNTVALWRCMSCGQELLG*GFHLWG
Trigger: GCCCCACAGGTGGAATCCCAAACCAAGCAGCTCTTG...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CAA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTTTGCACCTTCCATCTTaGGAGACTAGCCTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCLHLPS*ETSLAL
Trigger: AAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAA...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGACTGTGCCTCCACATaGCCAAATTCTATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEDCAST*PNSMLH
Trigger: GTGCAACATAGAATTTGGCAATGTGGAGGCACAGTC...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGAGCTTCCCTCCCCGTTaGCTGATCACTGCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VMDREGQSPISPCLKKAWSFPPR*LITAFL
Trigger: CAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCT...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp AGCCATCTACATGCATGCTGCCAGCCAGCAGGAGAATACACCAGGAAGAGTGCAGGTATTTCCCTTCCTTaGTCTTGGATACTATGGGAG +
Preference number: 5 (lower is better)
Translates to: SHLHACCQPAGEYTRKSAGISLP*SWILWE
Trigger: CTCCCATAGTATCCAAGACAAAGGAAGGGAAATACC...TGCACTCTTCCTGGTGTATTCTCCTGCTGGCTGGCAGCATGCATGTAGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGTGGAGATGCATGTCTaGTGGGATCACAATTGCGGG +
Preference number: 5 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRAVEMHV*WDHNCG
Trigger: CCCGCAATTGTGATCCCACAAGACATGCATCTCCAC...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGGTGGAGATGCATGTCTaGTGGGATCACAATTGCGGG +
Preference number: 5 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRVEMHV*WDHNCG
Trigger: CCCGCAATTGTGATCCCACAAGACATGCATCTCCAC...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp ATGTGCCAAGACTCACACTGGAGAGGCGTGATGGAGCTGTACCGGAAGGGGTGTGCCTCAAATTGTTCTTaGTGTAAGCGTTTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: MCQDSHWRGVMELYRKGCASNCS*CKRFLV
Trigger: GACAAGAAAACGCTTACACAAAGAACAATTTGAGGC...ACACCCCTTCCGGTACAGCTCCATCACGCCTCTCCAGTGTGAGTCTTGGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp GGCCAGGGTCATTTCCTCCTGAGGACTCCAGACAACAAATGTGTCCTATCTGCTCAGGTGCAGAGTGTCTaGATCCTAGCAAAGGGATAT +
Preference number: 5 (lower is better)
Translates to: GQGHFLLRTPDNKCVLSAQVQSV*ILAKGY
Trigger: ATATCCCTTTGCTAGGATCAAGACACTCTGCACCTG...AGCAGATAGGACACATTTGTTGTCTGGAGTCCTCAGGAGGAAATGACCCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS CCA 90 bp TATGGAAATCCACTCGGTATTTCCCTTCCTTTGTCTTGGATACTATaGGAGCAAAACGGTAGCCCCAAAGCACCTCCTCTGGGACATAGG +
Preference number: 5 (lower is better)
Translates to: YGNPLGISLPLSWIL*EQNGSPKAPPLGHR
Trigger: CCTATGTCCCAGAGGAGGTGCTTTGGGGCTACCGTTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAAATACCGAGTGGATTTCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCTTGCCAAATTCTATGTaGCACCTTCCATCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFLPNSM*HLPSLE
Trigger: CTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAA...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGATTTTGTATCTCCACTaGAGGTCAAGTACCGTTGTC +
Preference number: 5 (lower is better)
Translates to: TVALWRCMSCGITIAGLRILYLH*RSSTVV
Trigger: GACAACGGTACTTGACCTCAAGTGGAGATACAAAAT...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTATATCCAATGGTCACTaGAGTCTCCAGAGAAAACAG +
Preference number: 5 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSISNGH*SLQRKQ
Trigger: CTGTTTTCTCTGGAGACTCAAGTGACCATTGGATAT...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGAGCTTCCCTCCCCGTTaGCTGATCACTGCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: KCIARSNTVALWRCMSCGSFPPR*LITAFL
Trigger: CAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCT...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTCATCCTACTTTCTTCCCTTCCTTTGTCTaGGATACTATGGGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: RGSGVFVLVDFEGSHPTFFPSFV*DTMGAK
Trigger: TTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAA...GAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCGTGTCATCTGTTTCATaGACTTCTGACAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGVSSVS*TSDKMK
Trigger: CTTCATCTTGTCAGAAGTCAATGAAACAGATGACAC...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTTTGCTTTACTCCCGTaGAAAAGCCACTGTTACATT +
Preference number: 5 (lower is better)
Translates to: VGSQLRGSGVFVLVDFEGFALLP*KSHCYI
Trigger: AATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAAA...GCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GGCCAGGGTCATTTCCTCCTGAGGACTCCAGACAACAAATGTGTCCTATCTGCTCACAGAAGCATCCTGTaGAGGACCCATATTCTGTTT +
Preference number: 5 (lower is better)
Translates to: GQGHFLLRTPDNKCVLSAHRSIL*RTHILF
Trigger: AAACAGAATATGGGTCCTCAACAGGATGCTTCTGTG...AGCAGATAGGACACATTTGTTGTCTGGAGTCCTCAGGAGGAAATGACCCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGCAAGTCCCTGCACCTTaGATGCAAGAGTTTGGATAT +
Preference number: 5 (lower is better)
Translates to: EPSISWSLLGRWAVRERKQVPAP*MQEFGY
Trigger: ATATCCAAACTCTTGCATCAAAGGTGCAGGGACTTG...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGACTGGTATAGAGCAATaGTCACAACAGTCATTAGGA +
Preference number: 5 (lower is better)
Translates to: TVALWRCMSCGITIAGLRTGIEQ*SQQSLG
Trigger: TCCTAATGACTGTTGTGACAATTGCTCTATACCAGT...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CAA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTCTTGTCACACTGTCTTaGTCAGGGCCCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSLVTLS*SGPRMG
Trigger: CCCCATCCTGGGCCCTGACAAAGACAGTGTGACAAG...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CAA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGCTTTGGAGACTAGCCTaGCTCTTTGCCGAGAATGCC +
Preference number: 5 (lower is better)
Translates to: KCIARSNTVALWRCMSCGLWRLA*LFAENA
Trigger: GGCATTCTCGGCAAAGAGCAAGGCTAGTCTCCAAAG...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAATATCCAATGGTCACTaGAGTCTCCAGAGAAAACAG +
Preference number: 5 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEISNGH*SLQRKQ
Trigger: CTGTTTTCTCTGGAGACTCAAGTGACCATTGGATAT...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTGGGCCTGGAGATCTaGGCTAAGATGGCCCCACAC +
Preference number: 5 (lower is better)
Translates to: QESTYVFHTPVSYKCIARLGLEI*AKMAPH
Trigger: GTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCAA...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTTGGGCCTGGAGATCTaGGCTAAGATGGCCCCACAC +
Preference number: 5 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCLGLEI*AKMAPH
Trigger: GTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCAA...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCACTGATCACTGCGTTCTaGCTGAACGTAATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRALITAF*LNVMVL
Trigger: CAAGACCATTACGTTCAGCAAGAACGCAGTGATCAG...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTGCGTCAACTACAAAGTaGATATTGATCTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSASTTK*ILIWSK
Trigger: TTTGGACCAGATCAATATCAACTTTGTAGTTGACGC...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGCTTGTGGGATCACAATaGCGGGGCTCAGGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQLVGSQ*RGSGVF
Trigger: AAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTAGCGTTTTCTTGTCATaGATTGGTTGGTTCATCTCC +
Preference number: 5 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCSVFLS*IGWFIS
Trigger: GGAGATGAACCAACCAATCAATGACAAGAAAACGCT...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGTTGCACCTTCCATCTTaGGAGACTAGCCTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: VMDREGQSPISPCLKKAWLHLPS*ETSLAL
Trigger: AAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAA...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGATTTTGTATCTCCACTaGAGGTCAAGTACCGTTGTC +
Preference number: 5 (lower is better)
Translates to: EPSISWSLLGRWAVRERKILYLH*RSSTVV
Trigger: GACAACGGTACTTGACCTCAAGTGGAGATACAAAAT...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAGGCTCTATGAAAATGGTCATTTaGTATCTCCACTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: GSQLRGSGVFVLVDFEGSMKMVI*YLHLRS
Trigger: TGACCTCAAGTGGAGATACAAAATGACCATTTTCAT...AGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCGTCTTGGCACGTTTTTaGGGCCTGGAGATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLVLARF*GLEILA
Trigger: AGCCAAGATCTCCAGGCCCAAAAAACGTGCCAAGAC...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCATAGGATGTCCGGACTaGGCAGGTAGCACTGGTGGA +
Preference number: 5 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSIGCPD*AGSTGG
Trigger: TCCACCAGTGCTACCTGCCAAGTCCGGACATCCTAT...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAGGTATTTCCCTTCCTTaGTCTTGGATACTATGGGAG +
Preference number: 5 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGGISLP*SWILWE
Trigger: CTCCCATAGTATCCAAGACAAAGGAAGGGAAATACC...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGTGTCATCTGTTTCATaGACTTCTGACAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCVSSVS*TSDKMK
Trigger: CTTCATCTTGTCAGAAGTCAATGAAACAGATGACAC...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTTTTGCTTTACTCCCGTaGAAAAGCCACTGTTACATT +
Preference number: 5 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCFALLP*KSHCYI
Trigger: AATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAAA...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTTGTGGGATCACAATaGCGGGGCTCAGGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSLVGSQ*RGSGVF
Trigger: AAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTTGTGTAAGCGTTTTCTaGTCATTGATTGGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: LWRCMSCGITIAGLRGLCCVSVF*SLIGWF
Trigger: GAACCAACCAATCAATGACAAGAAAACGCTTACACA...ACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GGCCAGGGTCATTTCCTCCTGAGGACTCCAGACAACAAATGTGTCCTATCTGCTTGTGTAAGCGTTTTCTaGTCATTGATTGGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: GQGHFLLRTPDNKCVLSACVSVF*SLIGWF
Trigger: GAACCAACCAATCAATGACAAGAAAACGCTTACACA...AGCAGATAGGACACATTTGTTGTCTGGAGTCCTCAGGAGGAAATGACCCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp GAGCCTTCCATAAGCTGGTCCCTTTTAGGAAGATGGGCTGTCAGGGAAAGAAAGCTAAAGCATTCTGTCTaGCAGGAAGGTATCATCAAG +
Preference number: 5 (lower is better)
Translates to: EPSISWSLLGRWAVRERKLKHSV*QEGIIK
Trigger: CTTGATGATACCTTCCTGCAAGACAGAATGCTTTAG...CTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GAGTGCATGCTGATGGGAACAAGTGTCAACACAGTTTCCCTCCAGTTTATGAAGCCTTCTCTACTGACTTaGCACCTTCCAACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: ECMLMGTSVNTVSLQFMKPSLLT*HLPTPH
Trigger: ATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG...CTTCATAAACTGGAGGGAAACTGTGTTGACACTTGTTCCCATCAGCATGCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp ACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGATCACAATTGCGGGGCTCAGGTCAGAAAGATGTATGTaGTTCACCTCCCTAAACAAT +
Preference number: 5 (lower is better)
Translates to: TVALWRCMSCGITIAGLRSERCM*FTSLNN
Trigger: ATTGTTTAGGGAGGTGAACAACATACATCTTTCTGA...CCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCGGAGTGTTATGCGCTTaGGGGTTCCAGCCACTCCTT +
Preference number: 5 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSGVLCA*GFQPLL
Trigger: AAGGAGTGGCTGGAACCCCAAAGCGCATAACACTCC...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS CCA 90 bp GAGGTTCAGGAGATGATTTTCAAAACTTCATGTATAAGTAGATCTTaGGGTGACCAGCAAGAGCTGCTTGGTTTGGGATTCCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: EVQEMIFKTSCISRS*GDQQELLGLGFHLW
Trigger: CCACAGGTGGAATCCCAAACCAAGCAGCTCTTGCTGGTCACCCCAAGATCTACTTATACATGAAGTTTTGAAAATCATCTCCTGAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324036.7
ENST00000392666.6
ENST00000531562.1
CDS-3UTR CAA 90 bp GAGTGCATGCTGATGGGAACAAGTGTCAACACAGTTTCCCTCCAGTTTATGAAGCAAGTCCCTGCACCTTaGATGCAAGAGTTTGGATAT +
Preference number: 5 (lower is better)
Translates to: ECMLMGTSVNTVSLQFMKQVPAP*MQEFGY
Trigger: ATATCCAAACTCTTGCATCAAAGGTGCAGGGACTTG...CTTCATAAACTGGAGGGAAACTGTGTTGACACTTGTTCCCATCAGCATGCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAAGCAGAGATAAACAGTaGGCATTCACTGGTATAGAG +
Preference number: 5 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRASRDKQ*AFTGIE
Trigger: CTCTATACCAGTGAATGCCAACTGTTTATCTCTGCT...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCACCAGCAAGAGCTGCTaGGTTTGGGATTCCACCTGT +
Preference number: 5 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSTSKSC*VWDSTC
Trigger: ACAGGTGGAATCCCAAACCAAGCAGCTCTTGCTGGT...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CAA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTACCAGCAAGAGCTGCTaGGTTTGGGATTCCACCTGT +
Preference number: 5 (lower is better)
Translates to: QESTYVFHTPVSYKCIARTSKSC*VWDSTC
Trigger: ACAGGTGGAATCCCAAACCAAGCAGCTCTTGCTGGT...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CAA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTTTGGAGACTAGCCTaGCTCTTTGCCGAGAATGCC +
Preference number: 5 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSLWRLA*LFAENA
Trigger: GGCATTCTCGGCAAAGAGCAAGGCTAGTCTCCAAAG...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTCTTTGGAGACTAGCCTaGCTCTTTGCCGAGAATGCC +
Preference number: 5 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCLWRLA*LFAENA
Trigger: GGCATTCTCGGCAAAGAGCAAGGCTAGTCTCCAAAG...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGATTGCCAAATTCTATGTaGCACCTTCCATCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGLPNSM*HLPSLE
Trigger: CTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAA...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCATTGCCAAATTCTATGTaGCACCTTCCATCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRALPNSM*HLPSLE
Trigger: CTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAA...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAATTTTGTATCTCCACTaGAGGTCAAGTACCGTTGTC +
Preference number: 5 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRAILYLH*RSSTVV
Trigger: GACAACGGTACTTGACCTCAAGTGGAGATACAAAAT...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTGTGGGATCACAATTGCGGGGCTCAGGGGTCTTTGTGCTGGTAGACTTTGAAATGAAAATGGTCATTTaGTATCTCCACTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LVGSQLRGSGVFVLVDFEMKMVI*YLHLRS
Trigger: TGACCTCAAGTGGAGATACAAAATGACCATTTTCAT...TTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGTTGGGCCTGGAGATCTaGGCTAAGATGGCCCCACAC +
Preference number: 5 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLLGLEI*AKMAPH
Trigger: GTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCAA...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTGTCTTGGCACGTTTTTaGGGCCTGGAGATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSVLARF*GLEILA
Trigger: AGCCAAGATCTCCAGGCCCAAAAAACGTGCCAAGAC...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTTTGGAGACTAGCCTaGCTCTTTGCCGAGAATGCC +
Preference number: 5 (lower is better)
Translates to: KRAPMSSIHQFHINALHVLWRLA*LFAENA
Trigger: GGCATTCTCGGCAAAGAGCAAGGCTAGTCTCCAAAG...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTTGCACCTTCCATTGCACCTTCCATCTTaGGAGACTAGCCTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: LLRCINDTFPSLLTLHLPLHLPS*ETSLAL
Trigger: AAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAA...TGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGAGCTTCCCTCCCCGTTaGCTGATCACTGCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLSFPPR*LITAFL
Trigger: CAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCT...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAATGCATTGCACGTTCTAATACAGTAGCCTTGTGGAGATGCATGTCTTGTGGGGGTATTTCCCTTCCTTaGTCTTGGATACTATGGGAG +
Preference number: 5 (lower is better)
Translates to: KCIARSNTVALWRCMSCGGISLP*SWILWE
Trigger: CTCCCATAGTATCCAAGACAAAGGAAGGGAAATACC...CCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGGTGTCATCTGTTTCATaGACTTCTGACAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: FSTDFAPSNSSLLSSKSRVSSVS*TSDKMK
Trigger: CTTCATCTTGTCAGAAGTCAATGAAACAGATGACAC...CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGATTTGCTTTACTCCCGTaGAAAAGCCACTGTTACATT +
Preference number: 5 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGFALLP*KSHCYI
Trigger: AATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAAA...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGGTGGAGATGCATGTCTaGTGGGATCACAATTGCGGG +
Preference number: 5 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKVEMHV*WDHNCG
Trigger: CCCGCAATTGTGATCCCACAAGACATGCATCTCCAC...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGACTTGTCATTGATTGGTaGGTTCATCTCCCCAAATTA +
Preference number: 5 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGLVIDW*VHLPKL
Trigger: TAATTTGGGGAGATGAACCAACCAATCAATGACAAG...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GTGATGGATAGAGAAGGACAGTCACCTATCAGCCCATGTCTTAAAAAGGCATGGAGCGTTTTCTTGTCATaGATTGGTTGGTTCATCTCC +
Preference number: 5 (lower is better)
Translates to: VMDREGQSPISPCLKKAWSVFLS*IGWFIS
Trigger: GGAGATGAACCAACCAATCAATGACAAGAAAACGCT...CCATGCCTTTTTAAGACATGGGCTGATAGGTGACTGTCCTTCTCTATCCATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp CCTTCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCATGTGTAAGCGTTTTCTaGTCATTGATTGGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: PSLLTLHLPTPHCCLRRACVSVF*SLIGWF
Trigger: GAACCAACCAATCAATGACAAGAAAACGCTTACACA...TGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGCCTTCTCTACTGACTTaGCACCTTCCAACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQPSLLT*HLPTPH
Trigger: ATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS TCA 90 bp GCACACTGTTCTGTCACACACCTGAATCCATATCCAATGGTCACTTaGGTCTCCAGAGAAAACAGAAAAGCTGAGGTCAAGCCATTAATA +
Preference number: 5 (lower is better)
Translates to: AHCSVTHLNPYPMVT*VSRENRKAEVKPLI
Trigger: TATTAATGGCTTGACCTCAGCTTTTCTGTTTTCTCTGGAGACTCAAGTGACCATTGGATATGGATTCAGGTGTGTGACAGAACAGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTGACTGTGCCTCCACATaGCCAAATTCTATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: QESTYVFHTPVSYKCIARDCAST*PNSMLH
Trigger: GTGCAACATAGAATTTGGCAATGTGGAGGCACAGTC...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTGACTGTGCCTCCACATaGCCAAATTCTATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCDCAST*PNSMLH
Trigger: GTGCAACATAGAATTTGGCAATGTGGAGGCACAGTC...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCTCTACTGACTTTGCACCTTCCAACTCCTCATTGCTGTCTTCGAAGAGCAGGAATGAAAATGGTCATTTaGTATCTCCACTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SLLTLHLPTPHCCLRRAGMKMVI*YLHLRS
Trigger: TGACCTCAAGTGGAGATACAAAATGACCATTTTCAT...TCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGTCTTGGCACGTTTTTaGGGCCTGGAGATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: SLCKRFLVIDWLVHLPKLVLARF*GLEILA
Trigger: AGCCAAGATCTCCAGGCCCAAAAAACGTGCCAAGAC...TAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGGTCTTGGCACGTTTTTaGGGCCTGGAGATCTTGGCT +
Preference number: 5 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLVLARF*GLEILA
Trigger: AGCCAAGATCTCCAGGCCCAAAAAACGTGCCAAGAC...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGTGCATTTCCCTTCCTTTGTCTaGGATACTATGGGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: PVQTLGGGTHETVSSQVHFPSFV*DTMGAK
Trigger: TTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAA...ATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCTTCCAACTCCTCATaGCTGTCTTCGAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISPSNSS*LSSKSR
Trigger: CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGG...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTTGCACCTTCCAAGCAGAGATAAACAGTaGGCATTCACTGGTATAGAG +
Preference number: 5 (lower is better)
Translates to: LLRCINDTFPSLLTLHLPSRDKQ*AFTGIE
Trigger: CTCTATACCAGTGAATGCCAACTGTTTATCTCTGCT...TGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS-3UTR CAA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGTGTGGGGCTCAGAACTaGTCACACTGTCTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLCGAQN*SHCLCQ
Trigger: CTGACAAAGACAGTGTGACAAGTTCTGAGCCCCACA...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000392666.6
CDS-3UTR CAA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTTTGCACCTTCCATCTTaGGAGACTAGCCTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFLHLPS*ETSLAL
Trigger: AAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAA...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTGATCACTGCGTTCTaGCTGAACGTAATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: KRAPMSSIHQFHINALHVLITAF*LNVMVL
Trigger: CAAGACCATTACGTTCAGCAAGAACGCAGTGATCAG...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCTTCCCTTCCTTTGTCTaGGATACTATGGGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLFPSFV*DTMGAK
Trigger: TTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAA...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTGGTATTTCCCTTCCTTaGTCTTGGATACTATGGGAG +
Preference number: 5 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCGISLP*SWILWE
Trigger: CTCCCATAGTATCCAAGACAAAGGAAGGGAAATACC...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCTTCCAACTCCTCATaGCTGTCTTCGAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLPSNSS*LSSKSR
Trigger: CCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGG...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCCTTCTCTACTGACTTaGCACCTTCCAACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKPSLLT*HLPTPH
Trigger: ATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTGTCAGCACATTAAATaGTGGTGCCAAAGCACTCAC +
Preference number: 5 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCCQHIK*WCQSTH
Trigger: GTGAGTGCTTTGGCACCACAATTTAATGTGCTGACA...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp CAAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTCTTAAATATTGGAGCTaGAGCCAACCTAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: QESTYVFHTPVSYKCIARLKYWS*SQPKSR
Trigger: CCTGGACTTAGGTTGGCTCAAGCTCCAATATTTAAG...ACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGTTCTGGAAGGTCCAGTaGCACATCCCCTTAGTGATG +
Preference number: 5 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLFWKVQ*HIPLVM
Trigger: CATCACTAAGGGGATGTGCAACTGGACCTTCCAGAA...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392665.6
CDS-3UTR CAA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTAAGTGGTGCTGGTTGTaGGTCTTTCTATGCAGACTG +
Preference number: 5 (lower is better)
Translates to: KRAPMSSIHQFHINALHVKWCWL*VFLCRL
Trigger: CAGTCTGCATAGAAAGACCAACAACCAGCACCACTT...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS-3UTR CAA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTAGGAAGTGGTGCTGGTaGTTGGTCTTTCTATGCAGA +
Preference number: 5 (lower is better)
Translates to: KRAPMSSIHQFHINALHVRKWCW*LVFLCR
Trigger: TCTGCATAGAAAGACCAACAACCAGCACCACTTCCT...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS-3UTR CAA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCAAGTCCCTGCACCTTaGATGCAAGAGTTTGGATAT +
Preference number: 5 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFQVPAP*MQEFGY
Trigger: ATATCCAAACTCTTGCATCAAAGGTGCAGGGACTTG...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTTTGCCAAATTCTATGTaGCACCTTCCATCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSLPNSM*HLPSLE
Trigger: CTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAA...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTATATCCAATGGTCACTaGAGTCTCCAGAGAAAACAG +
Preference number: 5 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSISNGH*SLQRKQ
Trigger: CTGTTTTCTCTGGAGACTCAAGTGACCATTGGATAT...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTACTGATCACTGCGTTCTaGCTGAACGTAATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SLCKRFLVIDWLVHLPKLLITAF*LNVMVL
Trigger: CAAGACCATTACGTTCAGCAAGAACGCAGTGATCAG...TAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGCTGATCACTGCGTTCTaGCTGAACGTAATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLLITAF*LNVMVL
Trigger: CAAGACCATTACGTTCAGCAAGAACGCAGTGATCAG...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGCATTCCAGTACAAACTCTAGGTGGAGGAACACATGAAACTGTTTCTTCTCAGGCGTCAACTACAAAGTaGATATTGATCTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SIPVQTLGGGTHETVSSQASTTK*ILIWSK
Trigger: TTTGGACCAGATCAATATCAACTTTGTAGTTGACGC...CTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCTTTGCTTTACTCCCGTaGAAAAGCCACTGTTACATT +
Preference number: 5 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLFALLP*KSHCYI
Trigger: AATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAAA...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCCTCCTTGTCATTGATTGGTaGGTTCATCTCCCCAAATTA +
Preference number: 5 (lower is better)
Translates to: HSVLQEGIIKILVCRFSLLVIDW*VHLPKL
Trigger: TAATTTGGGGAGATGAACCAACCAATCAATGACAAG...GAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTTGCACCTTCCACTTGTCATTGATTGGTaGGTTCATCTCCCCAAATTA +
Preference number: 5 (lower is better)
Translates to: LLRCINDTFPSLLTLHLPLVIDW*VHLPKL
Trigger: TAATTTGGGGAGATGAACCAACCAATCAATGACAAG...TGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTCTCAGGTGCATTAATGATACATTCCCTTCTCTACTGACTTTGCACCTTCCAGCCTCAAATTGTTCTTaGTGTAAGCGTTTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: LLRCINDTFPSLLTLHLPASNCS*CKRFLV
Trigger: GACAAGAAAACGCTTACACAAAGAACAATTTGAGGC...TGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTCCTTCTCTACTGACTTaGCACCTTCCAACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFPSLLT*HLPTPH
Trigger: ATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGG...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGCAAGTCCCTGCACCTTaGATGCAAGAGTTTGGATAT +
Preference number: 5 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLQVPAP*MQEFGY
Trigger: ATATCCAAACTCTTGCATCAAAGGTGCAGGGACTTG...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGTTGCCAAATTCTATGTaGCACCTTCCATCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKLPNSM*HLPSLE
Trigger: CTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAA...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCGACTGTGCCTCCACATaGCCAAATTCTATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLDCAST*PNSMLH
Trigger: GTGCAACATAGAATTTGGCAATGTGGAGGCACAGTC...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTATTTTGTATCTCCACTaGAGGTCAAGTACCGTTGTC +
Preference number: 5 (lower is better)
Translates to: KRAPMSSIHQFHINALHVILYLH*RSSTVV
Trigger: GACAACGGTACTTGACCTCAAGTGGAGATACAAAAT...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AGATTTAGCCTCTGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTGCGTCAACTACAAAGTaGATATTGATCTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: RFSLCLNVPHEKLRASNCASTTK*ILIWSK
Trigger: TTTGGACCAGATCAATATCAACTTTGTAGTTGACGC...ACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTTTCCCTTCCTTTGTCTaGGATACTATGGGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: KRAPMSSIHQFHINALHVFPSFV*DTMGAK
Trigger: TTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAA...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp GAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTCTCTTGTCATTGATTGGTaGGTTCATCTCCCCAAATTA +
Preference number: 5 (lower is better)
Translates to: ESTYVFHTPVSYKCIARSLVIDW*VHLPKL
Trigger: TAATTTGGGGAGATGAACCAACCAATCAATGACAAG...AGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTAAAGCATTCTGTCTaGCAGGAAGGTATCATCAAG +
Preference number: 5 (lower is better)
Translates to: NVPHEKLRASNCSLCKRFLKHSV*QEGIIK
Trigger: CTTGATGATACCTTCCTGCAAGACAGAATGCTTTAG...AAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS TCA 90 bp GCATTCACTGGTATAGAGCAATTGTCACAACAGTCATTAGGAAGCTaGACAAATGTTGAGAAATCCAAATGTATCCATTCAGAATGGTGC +
Preference number: 5 (lower is better)
Translates to: AFTGIEQLSQQSLGS*TNVEKSKCIHSEWC
Trigger: GCACCATTCTGAATGGATACATTTGGATTTCTCAACATTTGTTCAGCTTCCTAATGACTGTTGTGACAATTGCTCTATACCAGTGAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS CCA 90 bp AATAAATTTTCATTCCCAGCGTCAACTACAAAGTTGATATTGATCTaGTCCAAAATAATGGTCTCTCCTTCAGGAGTGACTGTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: NKFSFPASTTKLILI*SKIMVSPSGVTVVF
Trigger: GAAGACCACAGTCACTCCTGAAGGAGAGACCATTATTTTGGACCAGATCAATATCAACTTTGTAGTTGACGCTGGGAATGAAAATTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTATTTTGTATCTCCACTaGAGGTCAAGTACCGTTGTC +
Preference number: 5 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFILYLH*RSSTVV
Trigger: GACAACGGTACTTGACCTCAAGTGGAGATACAAAAT...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGCATTCTGTCTTGCAGGAAGGTATCATCAAGATTCTAGTGTGCAGATTTAGCATGAAAATGGTCATTTaGTATCTCCACTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: KHSVLQEGIIKILVCRFSMKMVI*YLHLRS
Trigger: TGACCTCAAGTGGAGATACAAAATGACCATTTTCAT...GCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGATATCCAATGGTCACTaGAGTCTCCAGAGAAAACAG +
Preference number: 5 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLISNGH*SLQRKQ
Trigger: CTGTTTTCTCTGGAGACTCAAGTGACCATTGGATAT...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCATATCCAATGGTCACTaGAGTCTCCAGAGAAAACAG +
Preference number: 5 (lower is better)
Translates to: QIVLCVSVFLSLIGWFISISNGH*SLQRKQ
Trigger: CTGTTTTCTCTGGAGACTCAAGTGACCATTGGATAT...GGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TGTCTAAACGTACCACATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGGCGTCAACTACAAAGTaGATATTGATCTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: CLNVPHEKLRASNCSLCKASTTK*ILIWSK
Trigger: TTTGGACCAGATCAATATCAACTTTGTAGTTGACGC...CTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTGCGTCAACTACAAAGTaGATATTGATCTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: KRAPMSSIHQFHINALHVASTTK*ILIWSK
Trigger: TTTGGACCAGATCAATATCAACTTTGTAGTTGACGC...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGTTCCCTTCCTTTGTCTaGGATACTATGGGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLFPSFV*DTMGAK
Trigger: TTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAA...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCGGTATTTCCCTTCCTTaGTCTTGGATACTATGGGAG +
Preference number: 5 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLGISLP*SWILWE
Trigger: CTCCCATAGTATCCAAGACAAAGGAAGGGAAATACC...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTAGCGTTTTCTTGTCATaGATTGGTTGGTTCATCTCC +
Preference number: 5 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFSVFLS*IGWFIS
Trigger: GGAGATGAACCAACCAATCAATGACAAGAAAACGCT...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp AAGAGAGCACCTATGTCTTCCATACACCAGTTTCATATAAATGCATTGCACGTTGCCTCAAATTGTTCTTaGTGTAAGCGTTTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: KRAPMSSIHQFHINALHVASNCS*CKRFLV
Trigger: GACAAGAAAACGCTTACACAAAGAACAATTTGAGGC...AACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CGTTTTCTTGTCATTGATTGGTTGGTTCATCTCCCCAAATTAGGAGACAATTTTCTAAAGCATTCTGTCTaGCAGGAAGGTATCATCAAG +
Preference number: 5 (lower is better)
Translates to: RFLVIDWLVHLPKLGDNFLKHSV*QEGIIK
Trigger: CTTGATGATACCTTCCTGCAAGACAGAATGCTTTAG...AAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTGTCATCTGTTTCATaGACTTCTGACAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLVSSVS*TSDKMK
Trigger: CTTCATCTTGTCAGAAGTCAATGAAACAGATGACAC...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCAGCGTTTTCTTGTCATaGATTGGTTGGTTCATCTCC +
Preference number: 5 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLSVFLS*IGWFIS
Trigger: GGAGATGAACCAACCAATCAATGACAAGAAAACGCT...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp ATGAGAAGCTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGTGTGTAAGCGTTTTCTaGTCATTGATTGGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: MRSLEPQIVLCVSVFLSLCVSVF*SLIGWF
Trigger: GAACCAACCAATCAATGACAAGAAAACGCTTACACA...CAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp CTTAGAGCCTCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGATGAAAATGGTCATTTaGTATCTCCACTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LRASNCSLCKRFLVIDWLMKMVI*YLHLRS
Trigger: TGACCTCAAGTGGAGATACAAAATGACCATTTTCAT...CAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS-3UTR CAA 90 bp TCAAATTGTTCTTTGTGTAAGCGTTTTCTTGTCATTGATTGGTTGGTTCATCTCGCCTCAAATTGTTCTTaGTGTAAGCGTTTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: SNCSLCKRFLVIDWLVHLASNCS*CKRFLV
Trigger: GACAAGAAAACGCTTACACAAAGAACAATTTGAGGC...GAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324036.7
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CCA 72 bp GAGGGTACCCGAGGCCCTGTTGATTTTATGAGTCTGTaGGCCAGCTCAGACCGGCTGCCAACTCATCTGTAT +
Preference number: 6 (lower is better)
Translates to: EGTRGPVDFMSL*ASSDRLPTHLY
Trigger: ATACAGATGAGTTGGCAGCCGGTCTGAGCTGGCCCACAGACTCATAAAATCAACAGGGCCTCGGGTACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS CAA 72 bp GCCACTCGGATTAGGAGGCAAAGCTTCCCTCCCCGTTaGCTGATCACTGCGTTCTTGCTGAACGTAATGGTC +
Preference number: 6 (lower is better)
Translates to: ATRIRRQSFPPR*LITAFLLNVMV
Trigger: GACCATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCTTTGCCTCCTAATCCGAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CAA 72 bp AGTAGATCTTGGGGTGACCAGCAAGAGCTGCTTGGTTaGGGATTCCACCTGTGGGGCTCAGAACTTGTCACA +
Preference number: 6 (lower is better)
Translates to: SRSWGDQQELLG*GFHLWGSELVT
Trigger: TGTGACAAGTTCTGAGCCCCACAGGTGGAATCCCAAACCAAGCAGCTCTTGCTGGTCACCCCAAGATCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324036.7
ENST00000392666.6
ENST00000531562.1
CDS CAA 72 bp GCGTTCTTGCTGAACGTAATGGTCTTGGCACGTTTTTaGGGCCTGGAGATCTTGGCTAAGATGGCCCCACAC +
Preference number: 6 (lower is better)
Translates to: AFLLNVMVLARF*GLEILAKMAPH
Trigger: GTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCAAAAAACGTGCCAAGACCATTACGTTCAGCAAGAACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CAA 90 bp CTGAGATTAGCCACTCGGATTAGGAGGCAAAGCTTCCCTCCCCGTTaGCTGATCACTGCGTTCTTGCTGAACGTAATGGTCTTGGCACGT +
Preference number: 6 (lower is better)
Translates to: LRLATRIRRQSFPPR*LITAFLLNVMVLAR
Trigger: ACGTGCCAAGACCATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCTTTGCCTCCTAATCCGAGTGGCTAATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CCA 72 bp CCACTCGGTATTTCCCTTCCTTTGTCTTGGATACTATaGGAGCAAAACGGTAGCCCCAAAGCACCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: PLGISLPLSWIL*EQNGSPKAPPL
Trigger: CAGAGGAGGTGCTTTGGGGCTACCGTTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAAATACCGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CCA 72 bp GTGCCATCTAAAAACACCACTAATTCAAAGTCCTGCTaGAGAAGGGTCTCCGCTGCCATGTGGAAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: VPSKNTTNSKSC*RRVSAAMWKKG
Trigger: CCCTTTCTTCCACATGGCAGCGGAGACCCTTCTCCAGCAGGACTTTGAATTAGTGGTGTTTTTAGATGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CAA 90 bp TCATGTATAAGTAGATCTTGGGGTGACCAGCAAGAGCTGCTTGGTTaGGGATTCCACCTGTGGGGCTCAGAACTTGTCACACTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: SCISRSWGDQQELLG*GFHLWGSELVTLSL
Trigger: CAAAGACAGTGTGACAAGTTCTGAGCCCCACAGGTGGAATCCCAAACCAAGCAGCTCTTGCTGGTCACCCCAAGATCTACTTATACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324036.7
ENST00000392666.6
ENST00000531562.1
CDS CAA 90 bp CTGATCACTGCGTTCTTGCTGAACGTAATGGTCTTGGCACGTTTTTaGGGCCTGGAGATCTTGGCTAAGATGGCCCCACACATGAAAGAA +
Preference number: 6 (lower is better)
Translates to: LITAFLLNVMVLARF*GLEILAKMAPHMKE
Trigger: TTCTTTCATGTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCAAAAAACGTGCCAAGACCATTACGTTCAGCAAGAACGCAGTGATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS TCA 72 bp AACCAGATTCTCGATGTGAGCAAGTCCCTGCACCTTTaGTGCAAGAGTTTGGATATGCTAGGTGAGGGTACC +
Preference number: 6 (lower is better)
Translates to: NQILDVSKSLHL*CKSLDMLGEGT
Trigger: GGTACCCTCACCTAGCATATCCAAACTCTTGCATCAAAGGTGCAGGGACTTGCTCACATCGAGAATCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324036.7
ENST00000440599.6
CDS TCA 72 bp GAAAAATGGCAGTGGCACACTGTTCTGTCACACACCTaGATCCATATCCAATGGTCACTTGAGTCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: EKWQWHTVLSHT*IHIQWSLESPE
Trigger: CTCTGGAGACTCAAGTGACCATTGGATATGGATTCAGGTGTGTGACAGAACAGTGTGCCACTGCCATTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CCA 72 bp CCACATTGCCAAATTCTATGTTGCACCTTCCATCTTTaGAGACTAGCCTTGCTCTTTGCCGAGAATGCCCAA +
Preference number: 6 (lower is better)
Translates to: PHCQILCCTFHL*RLALLFAENAQ
Trigger: TTGGGCATTCTCGGCAAAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
ENST00000531562.1
CDS CCA 72 bp TCAACGTGTCAAACACATTCCGACTGGAAGCATTCATaGCTGGAAAAAGCAAGGAAGTGGTGCTGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: STCQTHSDWKHS*LEKARKWCWLL
Trigger: CAACAACCAGCACCACTTCCTTGCTTTTTCCAGCCATGAATGCTTCCAGTCGGAATGTGTTTGACACGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS CAA 72 bp TCCACATTGCCAAATTCTATGTTGCACCTTCCATCTTaGGAGACTAGCCTTGCTCTTTGCCGAGAATGCCCA +
Preference number: 6 (lower is better)
Translates to: STLPNSMLHLPS*ETSLALCRECP
Trigger: TGGGCATTCTCGGCAAAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAATGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
ENST00000531562.1
CDS CCA 72 bp TATGGAAATCCACTCGGTATTTCCCTTCCTTTGTCTTaGATACTATGGGAGCAAAACGGTAGCCCCAAAGCA +
Preference number: 6 (lower is better)
Translates to: YGNPLGISLPLS*ILWEQNGSPKA
Trigger: TGCTTTGGGGCTACCGTTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAAATACCGAGTGGATTTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CCA 72 bp GACTGGAAGCATTCATGGCTGGAAAAAGCAAGGAAGTaGTGCTGGTTGTTGGTCTTTCTATGCAGACTGATT +
Preference number: 6 (lower is better)
Translates to: DWKHSWLEKARK*CWLLVFLCRLI
Trigger: AATCAGTCTGCATAGAAAGACCAACAACCAGCACCACTTCCTTGCTTTTTCCAGCCATGAATGCTTCCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392664.2
CDS CAA 72 bp AACCTTGACTGTGCCTCCACATTGCCAAATTCTATGTaGCACCTTCCATCTTTGGAGACTAGCCTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: NLDCASTLPNSM*HLPSLETSLAL
Trigger: AAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAATGTGGAGGCACAGTCAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
ENST00000531562.1
CDS CAA 72 bp CAACTCCCCAAGAAGGCTGTGATGAAAATGGTCATTTaGTATCTCCACTTGAGGTCAAGTACCGTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: QLPKKAVMKMVI*YLHLRSSTVVQ
Trigger: CTGGACAACGGTACTTGACCTCAAGTGGAGATACAAAATGACCATTTTCATCACAGCCTTCTTGGGGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CAA 90 bp GTCCAGATGTCCACAAAGAATATAAACCTTGACTGTGCCTCCACATaGCCAAATTCTATGTTGCACCTTCCATCTTTGGAGACTAGCCTT +
Preference number: 6 (lower is better)
Translates to: VQMSTKNINLDCAST*PNSMLHLPSLETSL
Trigger: AAGGCTAGTCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAATGTGGAGGCACAGTCAAGGTTTATATTCTTTGTGGACATCTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
ENST00000531562.1
CDS CAA 72 bp AAGGCTGTGATGAAAATGGTCATTTTGTATCTCCACTaGAGGTCAAGTACCGTTGTCCAGATGTCCACAAAG +
Preference number: 6 (lower is better)
Translates to: KAVMKMVILYLH*RSSTVVQMSTK
Trigger: CTTTGTGGACATCTGGACAACGGTACTTGACCTCAAGTGGAGATACAAAATGACCATTTTCATCACAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CAA 72 bp GTAGAGAAGAAACCTGTTCAGAGCAGAGATAAACAGTaGGCATTCACTGGTATAGAGCAATTGTCACAACAG +
Preference number: 6 (lower is better)
Translates to: VEKKPVQSRDKQ*AFTGIEQLSQQ
Trigger: CTGTTGTGACAATTGCTCTATACCAGTGAATGCCAACTGTTTATCTCTGCTCTGAACAGGTTTCTTCTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324036.7
CDS CAA 72 bp GGTACTAGGAGCTTTAGAGACTTTGCTTTACTCCCGTaGAAAAGCCACTGTTACATTTTGGTGTCATCTGTT +
Preference number: 6 (lower is better)
Translates to: GTRSFRDFALLP*KSHCYILVSSV
Trigger: AACAGATGACACCAAAATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAAAGTCTCTAAAGCTCCTAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS TCA 72 bp GTACTAGGAGCTTTAGAGACTTTGCTTTACTCCCGTTaGAAAGCCACTGTTACATTTTGGTGTCATCTGTTT +
Preference number: 6 (lower is better)
Translates to: VLGALETLLYSR*KATVTFWCHLF
Trigger: AAACAGATGACACCAAAATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAAAGTCTCTAAAGCTCCTAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6
CDS CAA 72 bp AAATTTTCATTCCCAGCGTCAACTACAAAGTTGATATaGATCTGGTCCAAAATAATGGTCTCTCCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: KFSFPASTTKLI*IWSKIMVSPSG
Trigger: TCCTGAAGGAGAGACCATTATTTTGGACCAGATCAATATCAACTTTGTAGTTGACGCTGGGAATGAAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324036.7
ENST00000392664.2
ENST00000392665.6
ENST00000392666.6
ENST00000440599.6