Pregenerated sensors for KCNIP4-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000280650Ensembl transcript IDs: ENST00000627566.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAGTCCAAGGATTCAGGCGATCCTATTTTCTGGAGGCTCAATCAGTaGGGCCAAGGGCTCCACCTGTCCTGGGTTTTCCATCAGGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: KSKDSGDPIFWRLNQ*GQGLHLSWVFHQAP Trigger: GGGAGCCTGATGGAAAACCCAGGACAGGTGGAGCCCTTGGCCCCACTGATTGAGCCTCCAGAAAATAGGATCGCCTGAATCCTTGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 90 bp | TGGCAGAAAGTAGCCAAGGAGAACACTGGCCCAGTGCAAAGCATATaGCAATCTATGTTGGATAGAGAAGGGGAGATGAGTCAACCCCAC | + |
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Preference number: 5 (lower is better) Translates to: WQKVAKENTGPVQSI*QSMLDREGEMSQPH Trigger: GTGGGGTTGACTCATCTCCCCTTCTCTATCCAACATAGATTGGCATATGCTTTGCACTGGGCCAGTGTTCTCCTTGGCTACTTTCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 90 bp | GGTCCCATTCACCTCAGCTCACTGACTCCACGCTCAGGCTTGCTGTaGAGCTCATGCCTTTTAACCCAAACACTACATATTCCCTCATTA | + |
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Preference number: 5 (lower is better) Translates to: GPIHLSSLTPRSGLL*SSCLLTQTLHIPSL Trigger: TAATGAGGGAATATGTAGTGTTTGGGTTAAAAGGCATGAGCTCCACAGCAAGCCTGAGCGTGGAGTCAGTGAGCTGAGGTGAATGGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 90 bp | TTTAAATTGTCAGATGGGTGCATAGGTGAAGGAGACAAGAAACACTaGCCAGGGGAGACTCTCAAGATACTGGAACCCTCGTCTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: FKLSDGCIGEGDKKH*PGETLKILEPSSQF Trigger: GAACTGAGACGAGGGTTCCAGTATCTTGAGAGTCTCCCCTGGCCAGTGTTTCTTGTCTCCTTCACCTATGCACCCATCTGACAATTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 90 bp | GCCTTTCCTTTTTCCTGTGTGGCAGAACCATTGCAACACGCTGGTTaGAATGTTCAGATCTTGACTTCATCTTGGCTATTTGACTGTATT | + |
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Preference number: 5 (lower is better) Translates to: AFPFSCVAEPLQHAG*NVQILTSSWLFDCI Trigger: AATACAGTCAAATAGCCAAGATGAAGTCAAGATCTGAACATTCCAACCAGCGTGTTGCAATGGTTCTGCCACACAGGAAAAAGGAAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 90 bp | GAGTCACATGTGCTCAGAGTCACATCAGTAACTCAGCATCATACATaGCACATTCAAACTCACTCTGCATGCAACTGGTCTGTAGATTTA | + |
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Preference number: 5 (lower is better) Translates to: ESHVLRVTSVTQHHT*HIQTHSACNWSVDL Trigger: TAAATCTACAGACCAGTTGCATGCAGAGTGAGTTTGAATGTGTCATGTATGATGCTGAGTTACTGATGTGACTCTGAGCACATGTGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 90 bp | GTGTGGCAGAACCATTGCAACACGCTGGTTGGAATGTTCAGATCTTaGCTTCATCTTGGCTATTTGACTGTATTCTGTCAATTCAGAATC | + |
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Preference number: 5 (lower is better) Translates to: VWQNHCNTLVGMFRS*LHLGYLTVFCQFRI Trigger: GATTCTGAATTGACAGAATACAGTCAAATAGCCAAGATGAAGTCAAGATCTGAACATTCCAACCAGCGTGTTGCAATGGTTCTGCCACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 90 bp | CCATTGCAACACGCTGGTTGGAATGTTCAGATCTTGACTTCATCTTaGCTATTTGACTGTATTCTGTCAATTCAGAATCACTGCAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: PLQHAGWNVQILTSS*LFDCILSIQNHCRG Trigger: TCCTCTGCAGTGATTCTGAATTGACAGAATACAGTCAAATAGCCAAGATGAAGTCAAGATCTGAACATTCCAACCAGCGTGTTGCAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 90 bp | ATTTCTGGAGAATATGAGTATAATCCAGAACATGCAATCAGGTTGTaGCTGGGAAAATATGTTCACTCTGGTAGCAAGTATCACAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: ISGEYEYNPEHAIRL*LGKYVHSGSKYHRV Trigger: CACCCTGTGATACTTGCTACCAGAGTGAACATATTTTCCCAGCCACAACCTGATTGCATGTTCTGGATTATACTCATATTCTCCAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 90 bp | CTCCCAATACCATTGCTCTATTATCCAAATAGAGGGTTGGCAAATTaGTTCTGTAAAGGACCAGTACATGTTTTAGGCTTTGCAGGTTAT | + |
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Preference number: 5 (lower is better) Translates to: LPIPLLYYPNRGLAN*FCKGPVHVLGFAGY Trigger: ATAACCTGCAAAGCCTAAAACATGTACTGGTCCTTTACAGAAGCAATTTGCCAACCCTCTATTTGGATAATAGAGCAATGGTATTGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 90 bp | AACAATTCATTACAAACCAATAAGGTCACTGTCAAGATAAGTGTGTaGGGACCTCCAAGGAAGCTCTCTATTTTACTAAAGTCCAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: NNSLQTNKVTVKISV*GPPRKLSILLKSRE Trigger: CTCTCTGGACTTTAGTAAAATAGAGAGCTTCCTTGGAGGTCCCCACACACTTATCTTGACAGTGACCTTATTGGTTTGTAATGAATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 90 bp | AAGTATCACAGGGTGCTAAGAATACATGTGGGTTCTAAAAATGAATaGGACCTAAGGAGATACTGCCACAAGAGAAAAGGGTTACTTTGT | + |
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Preference number: 5 (lower is better) Translates to: KYHRVLRIHVGSKNE*DLRRYCHKRKGLLC Trigger: ACAAAGTAACCCTTTTCTCTTGTGGCAGTATCTCCTTAGGTCCCATTCATTTTTAGAACCCACATGTATTCTTAGCACCCTGTGATACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 90 bp | TATGCACATCTTGAAAGGGGGCATTATAAAGAGAGAACATTAAGGTaGACCACTGTGTTAGCACGTAATTCCTGTGATAAGTGGCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: YAHLERGHYKERTLR*TTVLARNSCDKWLF Trigger: AAAAAGCCACTTATCACAGGAATTACGTGCTAACACAGTGGTTCACCTTAATGTTCTCTCTTTATAATGCCCCCTTTCAAGATGTGCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 90 bp | ACAAACATTCAAGAGGTGCCTAGACAGACTAACAGGACCTTTCAATaGATTCAATTCCAACATTTGTTAATTGCCCCTAAGCATAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: TNIQEVPRQTNRTFQ*IQFQHLLIAPKHSN Trigger: GTTACTATGCTTAGGGGCAATTAACAAATGTTGGAATTGAATGCATTGAAAGGTCCTGTTAGTCTGTCTAGGCACCTCTTGAATGTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 90 bp | TTAGGCTTTGCAGGTTATACAATCTTTACCACAATTACTCAACTCTaGTGGCATAGCACAAAAGCAGTCATAGGCAATATGGAAATTAGT | + |
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Preference number: 5 (lower is better) Translates to: LGFAGYTIFTTITQL*WHSTKAVIGNMEIS Trigger: ACTAATTTCCATATTGCCTATGACTGCTTTTGTGCTATGCCAGCAGAGTTGAGTAATTGTGGTAAAGATTGTATAACCTGCAAAGCCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 90 bp | CTCCAGATAATTAAAAAGGTTGAACTTCTCAGCAGCTCAGATATTTaGGTAGCCTCTCAAGTTCCACTTAATGAATTAATTCTCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LQIIKKVELLSSSDI*VASQVPLNELILCA Trigger: AGCACAGAGAATTAATTCATTAAGTGGAACTTGAGAGGCTACTCAAATATCTGAGCTGCTGAGAAGTTCAACCTTTTTAATTATCTGGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 90 bp | AGAATACATGTGGGTTCTAAAAATGAATGGGACCTAAGGAGATACTaGCACAAGAGAAAAGGGTTACTTTGTGATATACATATATGTGTG | + |
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Preference number: 5 (lower is better) Translates to: RIHVGSKNEWDLRRY*HKRKGLLCDIHICV Trigger: CACACATATATGTATATCACAAAGTAACCCTTTTCTCTTGTGGCAGTATCTCCTTAGGTCCCATTCATTTTTAGAACCCACATGTATTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 90 bp | TTTTCTAATCTAATGGCATCTCTTTCTATTATAAGAGTGGATCTTTaGAATCTGCAAATCAGTCTGGACATCAGAGAAGAAAGTCACCTA | + |
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Preference number: 5 (lower is better) Translates to: FSNLMASLSIIRVDL*NLQISLDIREESHL Trigger: TAGGTGACTTTCTTCTCTGATGTCCAGACTGATTTGCAGATTGCAAAGATCCACTCTTATAATAGAAAGAGATGCCATTAGATTAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 72 bp | TTGAAACTGGAGATGGTCCCATTCACCTCAGCTCACTaGCTCCACGCTCAGGCTTGCTGTGGAGCTCATGCC | + |
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Preference number: 6 (lower is better) Translates to: LKLEMVPFTSAH*LHAQACCGAHA Trigger: GGCATGAGCTCCACAGCAAGCCTGAGCGTGGAGTCAGTGAGCTGAGGTGAATGGGACCATCTCCAGTTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | AATGGCAAGTCCAAGGATTCAGGCGATCCTATTTTCTaGAGGCTCAATCAGTGGGGCCAAGGGCTCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: NGKSKDSGDPIF*RLNQWGQGLHL Trigger: CAGGTGGAGCCCTTGGCCCCACTGATTGAGCCTCCAGAAAATAGGATCGCCTGAATCCTTGGACTTGCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | TCAGATGGGTGCATAGGTGAAGGAGACAAGAAACACTaGCCAGGGGAGACTCTCAAGATACTGGAACCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SDGCIGEGDKKH*PGETLKILEPS Trigger: CGAGGGTTCCAGTATCTTGAGAGTCTCCCCTGGCCAGTGTTTCTTGTCTCCTTCACCTATGCACCCATCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 72 bp | CCCATTCACCTCAGCTCACTGACTCCACGCTCAGGCTaGCTGTGGAGCTCATGCCTTTTAACCCAAACACTA | + |
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Preference number: 6 (lower is better) Translates to: PIHLSSLTPRSG*LWSSCLLTQTL Trigger: TAGTGTTTGGGTTAAAAGGCATGAGCTCCACAGCAAGCCTGAGCGTGGAGTCAGTGAGCTGAGGTGAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 90 bp | GGAGATGGTCCCATTCACCTCAGCTCACTGACTCCACGCTCAGGCTaGCTGTGGAGCTCATGCCTTTTAACCCAAACACTACATATTCCC | + |
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Preference number: 6 (lower is better) Translates to: GDGPIHLSSLTPRSG*LWSSCLLTQTLHIP Trigger: GGGAATATGTAGTGTTTGGGTTAAAAGGCATGAGCTCCACAGCAAGCCTGAGCGTGGAGTCAGTGAGCTGAGGTGAATGGGACCATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | CACCTCAGCTCACTGACTCCACGCTCAGGCTTGCTGTaGAGCTCATGCCTTTTAACCCAAACACTACATATT | + |
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Preference number: 6 (lower is better) Translates to: HLSSLTPRSGLL*SSCLLTQTLHI Trigger: AATATGTAGTGTTTGGGTTAAAAGGCATGAGCTCCACAGCAAGCCTGAGCGTGGAGTCAGTGAGCTGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | TCGTTCCAAGTATACAGGCCTTACAAGAACAGGTGGTaGGCCAGATTTGGCCCATTTGCTTACCTCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SFQVYRPYKNRW*ARFGPFAYLCP Trigger: AGGACAGAGGTAAGCAAATGGGCCAAATCTGGCCCACCACCTGTTCTTGTAAGGCCTGTATACTTGGAACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 72 bp | GTAGCCAAGGAGAACACTGGCCCAGTGCAAAGCATATaGCAATCTATGTTGGATAGAGAAGGGGAGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: VAKENTGPVQSI*QSMLDREGEMS Trigger: ACTCATCTCCCCTTCTCTATCCAACATAGATTGGCATATGCTTTGCACTGGGCCAGTGTTCTCCTTGGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | CCATGTACTCTGGCAGAAAGTAGCCAAGGAGAACACTaGCCCAGTGCAAAGCATATGCCAATCTATGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: PCTLAESSQGEH*PSAKHMPIYVG Trigger: TCCAACATAGATTGGCATATGCTTTGCACTGGGCCAGTGTTCTCCTTGGCTACTTTCTGCCAGAGTACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 72 bp | AAGCCCGCCTTTCCTTTTTCCTGTGTGGCAGAACCATaGCAACACGCTGGTTGGAATGTTCAGATCTTGACT | + |
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Preference number: 6 (lower is better) Translates to: KPAFPFSCVAEP*QHAGWNVQILT Trigger: AGTCAAGATCTGAACATTCCAACCAGCGTGTTGCAATGGTTCTGCCACACAGGAAAAAGGAAAGGCGGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 90 bp | CGTTCCAAGTATACAGGCCTTACAAGAACAGGTGGTGGGCCAGATTaGGCCCATTTGCTTACCTCTGTCCTAAATCATAACCACGATTCT | + |
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Preference number: 6 (lower is better) Translates to: RSKYTGLTRTGGGPD*AHLLTSVLNHNHDS Trigger: AGAATCGTGGTTATGATTTAGGACAGAGGTAAGCAAATGGGCCAAATCTGGCCCACCACCTGTTCTTGTAAGGCCTGTATACTTGGAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 72 bp | TCACTGACTCCACGCTCAGGCTTGCTGTGGAGCTCATaGCTTTTAACCCAAACACTACATATTCCCTCATTA | + |
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Preference number: 6 (lower is better) Translates to: SLTPRSGLLWSS*LLTQTLHIPSL Trigger: TAATGAGGGAATATGTAGTGTTTGGGTTAAAAGGCATGAGCTCCACAGCAAGCCTGAGCGTGGAGTCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | AAATCGTTCCAAGTATACAGGCCTTACAAGAACAGGTaGTGGGCCAGATTTGGCCCATTTGCTTACCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: KSFQVYRPYKNR*WARFGPFAYLC Trigger: ACAGAGGTAAGCAAATGGGCCAAATCTGGCCCACCACCTGTTCTTGTAAGGCCTGTATACTTGGAACGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | TCCTTTTTCCTGTGTGGCAGAACCATTGCAACACGCTaGTTGGAATGTTCAGATCTTGACTTCATCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFFLCGRTIATR*LECSDLDFILA Trigger: AGCCAAGATGAAGTCAAGATCTGAACATTCCAACCAGCGTGTTGCAATGGTTCTGCCACACAGGAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 72 bp | GTGCTCAGAGTCACATCAGTAACTCAGCATCATACATaGCACATTCAAACTCACTCTGCATGCAACTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VLRVTSVTQHHT*HIQTHSACNWS Trigger: AGACCAGTTGCATGCAGAGTGAGTTTGAATGTGTCATGTATGATGCTGAGTTACTGATGTGACTCTGAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 72 bp | TGGCTATTTGACTGTATTCTGTCAATTCAGAATCACTaGAGAGGAGCTTCTGAGTCTGGCACCATTCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: WLFDCILSIQNH*RGASESGTILK Trigger: CTTCAGAATGGTGCCAGACTCAGAAGCTCCTCTGCAGTGATTCTGAATTGACAGAATACAGTCAAATAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 72 bp | TATTCTGTCAATTCAGAATCACTGCAGAGGAGCTTCTaGGTCTGGCACCATTCTGAAGGTTTAACATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: YSVNSESLQRSF*VWHHSEGLTLW Trigger: CCACAATGTTAAACCTTCAGAATGGTGCCAGACTCAGAAGCTCCTCTGCAGTGATTCTGAATTGACAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 72 bp | AGTCAACCCCACCTAATGTATTCACAACCAAGAAGATaGGAAAAGAGATCCTGGGTAGACAGGAACAACAGA | + |
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Preference number: 6 (lower is better) Translates to: SQPHLMYSQPRR*EKRSWVDRNNR Trigger: TCTGTTGTTCCTGTCTACCCAGGATCTCTTTTCTCATCTTCTTGGTTGTGAATACATTAGGTGGGGTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | ACAAGAAACACTGGCCAGGGGAGACTCTCAAGATACTaGAACCCTCGTCTCAGTTCTGTCTTAATAAAATTT | + |
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Preference number: 6 (lower is better) Translates to: TRNTGQGRLSRY*NPRLSSVLIKF Trigger: AAATTTTATTAAGACAGAACTGAGACGAGGGTTCCAGTATCTTGAGAGTCTCCCCTGGCCAGTGTTTCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | AGGGTGCTAAGAATACATGTGGGTTCTAAAAATGAATaGGACCTAAGGAGATACTGCCACAAGAGAAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: RVLRIHVGSKNE*DLRRYCHKRKG Trigger: CCCTTTTCTCTTGTGGCAGTATCTCCTTAGGTCCCATTCATTTTTAGAACCCACATGTATTCTTAGCACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | TTTTCCTGTGTGGCAGAACCATTGCAACACGCTGGTTaGAATGTTCAGATCTTGACTTCATCTTGGCTATTT | + |
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Preference number: 6 (lower is better) Translates to: FSCVAEPLQHAG*NVQILTSSWLF Trigger: AAATAGCCAAGATGAAGTCAAGATCTGAACATTCCAACCAGCGTGTTGCAATGGTTCTGCCACACAGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 72 bp | TTTTTCCTGTGTGGCAGAACCATTGCAACACGCTGGTaGGAATGTTCAGATCTTGACTTCATCTTGGCTATT | + |
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Preference number: 6 (lower is better) Translates to: FFLCGRTIATRW*ECSDLDFILAI Trigger: AATAGCCAAGATGAAGTCAAGATCTGAACATTCCAACCAGCGTGTTGCAATGGTTCTGCCACACAGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 72 bp | GACCAGATCTCAACTTATACTAGCTTGAGGATTTATTaGTTACCCCAAATGGCAAGTCCAAGGATTCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: DQISTYTSLRIY*LPQMASPRIQA Trigger: CGCCTGAATCCTTGGACTTGCCATTTGGGGTAACAAATAAATCCTCAAGCTAGTATAAGTTGAGATCTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 72 bp | TCTCCTATGTCCACACCAGAACTGCAATTTCTAGATTaGAGTACAATGGTGAATGGGGATCATAATCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SPMSTPELQFLD*STMVNGDHNLP Trigger: AGGAAGATTATGATCCCCATTCACCATTGTACTGCAATCTAGAAATTGCAGTTCTGGTGTGGACATAGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 72 bp | GGAGAATATGAGTATAATCCAGAACATGCAATCAGGTaGTGGCTGGGAAAATATGTTCACTCTGGTAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: GEYEYNPEHAIR*WLGKYVHSGSK Trigger: CTTGCTACCAGAGTGAACATATTTTCCCAGCCACAACCTGATTGCATGTTCTGGATTATACTCATATTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 72 bp | GAACCATTGCAACACGCTGGTTGGAATGTTCAGATCTaGACTTCATCTTGGCTATTTGACTGTATTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: EPLQHAGWNVQI*TSSWLFDCILS Trigger: TGACAGAATACAGTCAAATAGCCAAGATGAAGTCAAGATCTGAACATTCCAACCAGCGTGTTGCAATGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 90 bp | TGTGTGGCAGAACCATTGCAACACGCTGGTTGGAATGTTCAGATCTaGACTTCATCTTGGCTATTTGACTGTATTCTGTCAATTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: CVAEPLQHAGWNVQI*TSSWLFDCILSIQN Trigger: ATTCTGAATTGACAGAATACAGTCAAATAGCCAAGATGAAGTCAAGATCTGAACATTCCAACCAGCGTGTTGCAATGGTTCTGCCACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 90 bp | CAGATAAGCACCGTTATTCACAATTCTCTTTATAGACATTACCCTTaGTTTATTCTGCAGGTGAGCCAGTTTGGCCTTGTCTCTGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: QISTVIHNSLYRHYP*FILQVSQFGLVSVA Trigger: TGCAACAGAGACAAGGCCAAACTGGCTCACCTGCAGAATAAACAAAGGGTAATGTCTATAAAGAGAATTGTGAATAACGGTGCTTATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 72 bp | GACTGCAGCTCATTGGTTTATTCAGCCAGTGTGTACTaGATGCTTTTTATAAGCTTTGTCCTCATTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: DCSSLVYSASVY*MLFISFVLIEV Trigger: AACCTCAATGAGGACAAAGCTTATAAAAAGCATTCAGTACACACTGGCTGAATAAACCAATGAGCTGCAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 72 bp | CTCCCAATACCATTGCTCTATTATCCAAATAGAGGGTaGGCAAATTGCTTCTGTAAAGGACCAGTACATGTT | + |
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Preference number: 6 (lower is better) Translates to: LPIPLLYYPNRG*ANCFCKGPVHV Trigger: AACATGTACTGGTCCTTTACAGAAGCAATTTGCCAACCCTCTATTTGGATAATAGAGCAATGGTATTGGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 90 bp | ATTATTTCTGGAGAATATGAGTATAATCCAGAACATGCAATCAGGTaGTGGCTGGGAAAATATGTTCACTCTGGTAGCAAGTATCACAGG | + |
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Preference number: 6 (lower is better) Translates to: IISGEYEYNPEHAIR*WLGKYVHSGSKYHR Trigger: CCTGTGATACTTGCTACCAGAGTGAACATATTTTCCCAGCCACAACCTGATTGCATGTTCTGGATTATACTCATATTCTCCAGAAATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 90 bp | ATTTACAGTGACCAGATCTCAACTTATACTAGCTTGAGGATTTATTaGTTACCCCAAATGGCAAGTCCAAGGATTCAGGCGATCCTATTT | + |
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Preference number: 6 (lower is better) Translates to: IYSDQISTYTSLRIY*LPQMASPRIQAILF Trigger: AAATAGGATCGCCTGAATCCTTGGACTTGCCATTTGGGGTAACAAATAAATCCTCAAGCTAGTATAAGTTGAGATCTGGTCACTGTAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 90 bp | TTCAAGTACCTCCCAATACCATTGCTCTATTATCCAAATAGAGGGTaGGCAAATTGCTTCTGTAAAGGACCAGTACATGTTTTAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FKYLPIPLLYYPNRG*ANCFCKGPVHVLGF Trigger: AAAGCCTAAAACATGTACTGGTCCTTTACAGAAGCAATTTGCCAACCCTCTATTTGGATAATAGAGCAATGGTATTGGGAGGTACTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 72 bp | CCATTGCTCTATTATCCAAATAGAGGGTTGGCAAATTaGTTCTGTAAAGGACCAGTACATGTTTTAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PLLYYPNRGLAN*FCKGPVHVLGF Trigger: AAAGCCTAAAACATGTACTGGTCCTTTACAGAAGCAATTTGCCAACCCTCTATTTGGATAATAGAGCAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS GCA 72 bp | CTTCCTTACAACATTTCAAGTACCTCCCAATACCATTaGTCTATTATCCAAATAGAGGGTTGGCAAATTGCT | + |
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Preference number: 6 (lower is better) Translates to: LPYNISSTSQYH*SIIQIEGWQIA Trigger: AGCAATTTGCCAACCCTCTATTTGGATAATAGAGCAATGGTATTGGGAGGTACTTGAAATGTTGTAAGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | TGTATGTTTTATTGGTTACTAACCTGGGTGACACAGTaGCCTTGTTGTAGAGCCCTACAAATATTCAAATCA | + |
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Preference number: 6 (lower is better) Translates to: CMFYWLLTWVTQ*PCCRALQIFKS Trigger: TGATTTGAATATTTGTAGGGCTCTACAACAAGGCCACTGTGTCACCCAGGTTAGTAACCAATAAAACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | TCCCAATACCATTGCTCTATTATCCAAATAGAGGGTTaGCAAATTGCTTCTGTAAAGGACCAGTACATGTTT | + |
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Preference number: 6 (lower is better) Translates to: SQYHCSIIQIEG*QIASVKDQYMF Trigger: AAACATGTACTGGTCCTTTACAGAAGCAATTTGCCAACCCTCTATTTGGATAATAGAGCAATGGTATTGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 90 bp | AAGGACAGTAGTAAGATTGACCAGGTTTCTTTGTACTCTCTATATTaGAAGAAATTGAGCCAGTTCAGTCCAAGTCACTTAAATCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: KDSSKIDQVSLYSLY*KKLSQFSPSHLNPE Trigger: CTCAGGATTTAAGTGACTTGGACTGAACTGGCTCAATTTCTTCAAATATAGAGAGTACAAAGAAACCTGGTCAATCTTACTACTGTCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 90 bp | TTATGGGTTAGATTTCAGATGGCACCCACCTCGGGAGCACGATTATaGAACTCAATCCTTAAATTATTTCTGGAGAATATGAGTATAATC | + |
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Preference number: 6 (lower is better) Translates to: LWVRFQMAPTSGARL*NSILKLFLENMSII Trigger: GATTATACTCATATTCTCCAGAAATAATTTAAGGATTGAGTTCAATAATCGTGCTCCCGAGGTGGGTGCCATCTGAAATCTAACCCATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 72 bp | CCTCCAGCAAGTTATTTAGGTGTTCTGAGTGTCAGATaGCTAATTCATAAAATGGACACATTAACACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PPASYLGVLSVR*LIHKMDTLTPF Trigger: GAAAGGTGTTAATGTGTCCATTTTATGAATTAGTCATCTGACACTCAGAACACCTAAATAACTTGCTGGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS TCA 72 bp | ATTATGATGCACCAGCTACCTGCATTTGTATTTGACTaGTTTACAGTGACCAGATCTCAACTTATACTAGCT | + |
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Preference number: 6 (lower is better) Translates to: IMMHQLPAFVFD*FTVTRSQLILA Trigger: AGCTAGTATAAGTTGAGATCTGGTCACTGTAAATCAGTCAAATACAAATGCAGGTAGCTGGTGCATCATAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CCA 72 bp | TCCAAGTCCATTGATGAGGTGAATGAAGTCCAAGAATaGCTACGTTTTCAGAATTTACATGGGTATTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: SKSIDEVNEVQE*LRFQNLHGYFK Trigger: CTTAAAATACCCATGTAAATTCTGAAAACGTAGCCATTCTTGGACTTCATTCACCTCATCAATGGACTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 72 bp | TCTTTCAAGGACAGTAGTAAGATTGACCAGGTTTCTTaGTACTCTCTATATTTGAAGAAATTGAGCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SFKDSSKIDQVS*YSLYLKKLSQF Trigger: GAACTGGCTCAATTTCTTCAAATATAGAGAGTACAAAGAAACCTGGTCAATCTTACTACTGTCCTTGAAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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| CDS CAA 72 bp | AGGATGTTTAAAACCTACCCACATATACTTACTTATTaGTCACTTTGTTTGTTTCTAGGCACTAACTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RMFKTYPHILTY*SLCLFLGTNSA Trigger: AGCAGAGTTAGTGCCTAGAAACAAACAAAGTGACAAATAAGTAAGTATATGTGGGTAGGTTTTAAACATCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627566.1 |
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