RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNIP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000185774

Ensembl transcript IDs: ENST00000359001.9, ENST00000382148.7, ENST00000382149.9, ENST00000382150.8, ENST00000382152.7, ENST00000447367.6, ENST00000509207.1, ENST00000512102.1, ENST00000515373.1, ENST00000515786.2, ENST00000629040.1, ENST00000629874.1, ENST00000630138.1

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTTGCTCTGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTaGCGGTGGCCATCTCCAGTTCATCTTCCACGCTGTATGATGATC +
Preference number: 1 (lower is better)
Translates to: ICSGLPEAQGLQADA*RWPSPVHLPRCMMI
Trigger: GATCATCATACAGCGTGGAAGATGAACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCAGAGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR GCA 90 bp GTAAATTTGCTCTGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATaGCTGACGGTGGCCATCTCCAGTTCATCTTCCACGCTGTATGAT +
Preference number: 1 (lower is better)
Translates to: VNLLWASRSSRASGR*LTVAISSSSSTLYD
Trigger: ATCATACAGCGTGGAAGATGAACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCAGAGCAAATTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR GCA 90 bp GATGAAATCCTCGAAACTCACAGCTCCATTGTGGTCTGTATCAAATaGATTGAACAGAAAATGTGCATATGTTGTAGAGTCTCCCTGTGG +
Preference number: 1 (lower is better)
Translates to: DEILETHSSIVVCIK*IEQKMCICCRVSLW
Trigger: CCACAGGGAGACTCTACAACATATGCACATTTTCTGTTCAATGCATTTGATACAGACCACAATGGAGCTGTGAGTTTCGAGGATTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR-3UTR TCA 90 bp AAGGATCTGAAGCTCTTTCTTGGTAAATTTGCTCTGGGCTTCCAGAAGCTCAAGCGCTGTATGATGATCTaGCAGGTGCTCCCACTTCCG +
Preference number: 2 (lower is better)
Translates to: KDLKLFLGKFALGFQKLKRCMMI*QVLPLP
Trigger: CGGAAGTGGGAGCACCTGTCAGATCATCATACAGCG...CTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGAGCTTCAGATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR-3UTR TCA 90 bp GTATCAAATGCATTGAACAGAAAATGTGCATATGTTGTAGAGTCTCCCTGTGGACTTCAGGCCGATGCCTaGCGGTGGCCATCTCCAGTT +
Preference number: 2 (lower is better)
Translates to: VSNALNRKCAYVVESPCGLQADA*RWPSPV
Trigger: AACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAG...TCCACAGGGAGACTCTACAACATATGCACATTTTCTGTTCAATGCATTTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR-3UTR CCA 90 bp AACAACACCACTGGGGCATTCATTCTTAAATCCTCTGTAAAGGATCTGAAGCTCTTGGTAAATTTGCTCTaGGCTTCCAGAAGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: NNTTGAFILKSSVKDLKLLVNLL*ASRSSR
Trigger: CCTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAA...GAGCTTCAGATCCTTTACAGAGGATTTAAGAATGAATGCCCCAGTGGTGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR-3UTR TCA 90 bp TACACTGGTGATAGCAGGGCAGCTTTCAACATCCTATCTCTACACCAGAATAGACATCCTTGTTTTGTTTaGTGCCTTCTTCAACTTCCA +
Preference number: 2 (lower is better)
Translates to: YTGDSRAAFNILSLHQNRHPCFV*CLLQLP
Trigger: TGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATG...TCTATTCTGGTGTAGAGATAGGATGTTGAAAGCTGCCCTGCTATCACCAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR-3UTR CCA 90 bp TACACTGGTGATAGCAGGGCAGCTTTCAACATCCTATCTCTACACCAGAATAGAGTTCTTAGTAGACAGTaGGGTAGTCAAGGTTTCTTT +
Preference number: 2 (lower is better)
Translates to: YTGDSRAAFNILSLHQNRVLSRQ*GSQGFF
Trigger: AAAGAAACCTTGACTACCCCACTGTCTACTAAGAAC...TCTATTCTGGTGTAGAGATAGGATGTTGAAAGCTGCCCTGCTATCACCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR CAA 90 bp AAATCCTCGAAACTCACAGCTCCATTGTGGTCTGTATCAAATGCATaGAACAGAAAATGTGCATATGTTGTAGAGTCTCCCTGTGGAAAG +
Preference number: 2 (lower is better)
Translates to: KSSKLTAPLWSVSNA*NRKCAYVVESPCGK
Trigger: CTTTCCACAGGGAGACTCTACAACATATGCACATTTTCTGTTCAATGCATTTGATACAGACCACAATGGAGCTGTGAGTTTCGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR-3UTR TCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACGCTTCAGTGTCAAGCTaGGCAATCTATGCTAAAAGT +
Preference number: 2 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNASVSS*AIYAKS
Trigger: ACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGC...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
3UTR-3UTR GCA 90 bp CCGGAGCAAAATGGAAAGACCTTTGATGAAATCCTCGAAACTCACAGCTCCATTATTGAACAGAAAATGTaGATATGTTGTAGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: PEQNGKTFDEILETHSSIIEQKM*ICCRVS
Trigger: GGAGACTCTACAACATATGCACATTTTCTGTTCAAT...AATGGAGCTGTGAGTTTCGAGGATTTCATCAAAGGTCTTTCCATTTTGCTCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR-3UTR CCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGTTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 2 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
3UTR-3UTR TCA 90 bp CCTTTGCATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCGCTTCAGTGTCAAGCTaGGCAATCTATGCTAAAAGT +
Preference number: 2 (lower is better)
Translates to: PLHMSVNILVLFDAFFNFASVSS*AIYAKS
Trigger: ACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGC...GAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
3UTR-3UTR TCA 90 bp TTGCTTGCTAATTTTGCTTGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGAATATTCACAGAGTATaGAATGAGTTAGACCATCCC +
Preference number: 2 (lower is better)
Translates to: LLANFACCLFLVDSGVVKNIHRV*NELDHP
Trigger: GGGATGGTCTAACTCATTTCATACTCTGTGAATATT...CTTGACTACCCCACTGTCTACTAAGAACAAACAGCAAGCAAAATTAGCAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR-3UTR TCA 90 bp TCATCTTTTTGGCAGCTTTCAATGAACTCATCTATGGTAACAACCCCATCTTTATGGGAGCATCTTCTTTaGGGACAGGATATGTACATT +
Preference number: 2 (lower is better)
Translates to: SSFWQLSMNSSMVTTPSLWEHLL*GQDMYI
Trigger: AATGTACATATCCTGTCCTCAAAGAAGATGCTCCCA...TAAAGATGGGGTTGTTACCATAGATGAGTTCATTGAAAGCTGCCAAAAAGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR-3UTR TCA 90 bp CTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTATATGCTTCAGTGTCAAGCTaGGCAATCTATGCTAAAAGT +
Preference number: 2 (lower is better)
Translates to: LICESLNNPMAKEPIKLYASVSS*AIYAKS
Trigger: ACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGC...ATATAGTTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
3UTR-3UTR TCA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTATCACAGAGTATGAAATaGGTTAGACCATCCCCTGAA +
Preference number: 2 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLSQSMK*VRPSPE
Trigger: TTCAGGGGATGGTCTAACTCATTTCATACTCTGTGA...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
3UTR-3UTR TCA 90 bp AGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACTCACAGAGTATGAAATaGGTTAGACCATCCCCTGAA +
Preference number: 2 (lower is better)
Translates to: RGQIWPLMLLGLLVIKHYSQSMK*VRPSPE
Trigger: TTCAGGGGATGGTCTAACTCATTTCATACTCTGTGA...GTAATGCTTAATAACAAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR-3UTR CCA 90 bp TTGCTTGCTAATTTTGCTTGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGTTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 2 (lower is better)
Translates to: LLANFACCLFLVDSGVVKFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...CTTGACTACCCCACTGTCTACTAAGAACAAACAGCAAGCAAAATTAGCAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR-3UTR CCA 90 bp TTTGTGATATTTCTACAAAACAGGGACGATGTGTGTGGCTTTAGTAATGTGGCAAGCATTACTATATACTaGAGGATAGATATCCTGACC +
Preference number: 2 (lower is better)
Translates to: FVIFLQNRDDVCGFSNVASITIY*RIDILT
Trigger: GGTCAGGATATCTATCCTCCAGTATATAGTAATGCT...TGCCACATTACTAAAGCCACACACATCGTCCCTGTTTTGTAGAAATATCACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR-3UTR CCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACTTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 2 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
3UTR-3UTR CCA 90 bp TTTGTGATATTTCTACAAAACAGGGACGATGTGTGTGGCTTTAGTAATGTGGCATTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 2 (lower is better)
Translates to: FVIFLQNRDDVCGFSNVAFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...TGCCACATTACTAAAGCCACACACATCGTCCCTGTTTTGTAGAAATATCACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR CAA 90 bp GTTATTAAGCATTACTATATACTGGAGGATAGATATCCTGACCCTTaGCATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: VIKHYYILEDRYPDP*HMSVNILVLFDAFF
Trigger: GAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTAATGCTTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
3UTR-3UTR CCA 90 bp CCTTTGCATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCTTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 2 (lower is better)
Translates to: PLHMSVNILVLFDAFFNFFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...GAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
3UTR TCA 72 bp GGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTaGCGGTGGCCATCTCCAGTTCATCTTCCACGCTGT +
Preference number: 3 (lower is better)
Translates to: GLPEAQGLQADA*RWPSPVHLPRC
Trigger: ACAGCGTGGAAGATGAACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR GCA 72 bp CTCTGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATaGCTGACGGTGGCCATCTCCAGTTCATCTTCCACG +
Preference number: 3 (lower is better)
Translates to: LWASRSSRASGR*LTVAISSSSST
Trigger: CGTGGAAGATGAACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR-3UTR CAA 90 bp CCGGAGCAAAATGGAAAGACCTTTGATGAAATCCTCGAAACTCACAGCTCCATTTCTTTCTTGGTAAATTaGCTCTGGGCTTCCAGAAGC +
Preference number: 3 (lower is better)
Translates to: PEQNGKTFDEILETHSSISFLVN*LWASRS
Trigger: GCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGA...AATGGAGCTGTGAGTTTCGAGGATTTCATCAAAGGTCTTTCCATTTTGCTCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR-3UTR CAA 90 bp TGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGGTTTCTTTCTTTGTCCCTGGAAAGAGGACAGATTaGGCCTTTAATGCTGTTAGG +
Preference number: 3 (lower is better)
Translates to: CCLFLVDSGVVKVSFFVPGKRTD*AFNAVR
Trigger: CCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCC...AGGGACAAAGAAAGAAACCTTGACTACCCCACTGTCTACTAAGAACAAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR-3UTR CAA 90 bp TACACTGGTGATAGCAGGGCAGCTTTCAACATCCTATCTCTACACCAGAATAGAAGATATCCTGACCCTTaGCATATGTCTGTAAACATC +
Preference number: 3 (lower is better)
Translates to: YTGDSRAAFNILSLHQNRRYPDP*HMSVNI
Trigger: GATGTTTACAGACATATGCAAAGGGTCAGGATATCT...TCTATTCTGGTGTAGAGATAGGATGTTGAAAGCTGCCCTGCTATCACCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR-3UTR CAA 90 bp TACACTGGTGATAGCAGGGCAGCTTTCAACATCCTATCTCTACACCAGAATAGATTGTTGCAAAGACAGTaGCAAATTTCCTCCTTCTGT +
Preference number: 3 (lower is better)
Translates to: YTGDSRAAFNILSLHQNRLLQRQ*QISSFC
Trigger: ACAGAAGGAGGAAATTTGCAACTGTCTTTGCAACAA...TCTATTCTGGTGTAGAGATAGGATGTTGAAAGCTGCCCTGCTATCACCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR-3UTR CAA 90 bp TTGCTTGCTAATTTTGCTTGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGAGATATCCTGACCCTTaGCATATGTCTGTAAACATC +
Preference number: 3 (lower is better)
Translates to: LLANFACCLFLVDSGVVKRYPDP*HMSVNI
Trigger: GATGTTTACAGACATATGCAAAGGGTCAGGATATCT...CTTGACTACCCCACTGTCTACTAAGAACAAACAGCAAGCAAAATTAGCAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR-3UTR CAA 90 bp TTCATCTTTTTGGCAGCTTTCAATGAACTCATCTATGGTAACAACCCCATCTTTCTGGGAGCATCTTCTTaGAGGACAGGATATGTACAT +
Preference number: 3 (lower is better)
Translates to: FIFLAAFNELIYGNNPIFLGASS*RTGYVH
Trigger: ATGTACATATCCTGTCCTCAAAGAAGATGCTCCCAG...AAAGATGGGGTTGTTACCATAGATGAGTTCATTGAAAGCTGCCAAAAAGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515786.2
3UTR TCA 72 bp TGCCAGATTCTATTACTTTTGAATATTCACAGAGTATaGAATGAGTTAGACCATCCCCTGAACTCAGTGGCA +
Preference number: 3 (lower is better)
Translates to: CQILLLLNIHRV*NELDHPLNSVA
Trigger: TGCCACTGAGTTCAGGGGATGGTCTAACTCATTTCATACTCTGTGAATATTCAAAAGTAATAGAATCTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
3UTR-3UTR CAA 90 bp TTCATCTTTTTGGCAGCTTTCAATGAACTCATCTATGGTAACAACCCCATCTTTAAATGTTTCAACGTGTaGTCTGGGAGCATCTTCTTT +
Preference number: 3 (lower is better)
Translates to: FIFLAAFNELIYGNNPIFKCFNV*SGSIFF
Trigger: AAAGAAGATGCTCCCAGACAACACGTTGAAACATTT...AAAGATGGGGTTGTTACCATAGATGAGTTCATTGAAAGCTGCCAAAAAGATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR TCA 90 bp GCTCTGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTGACGGTGGCCATCGCTGTATGATGATCTaGCAGGTGCTCCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: ALGFQKLKGFRPMPDGGHRCMMI*QVLPLP
Trigger: CGGAAGTGGGAGCACCTGTCAGATCATCATACAGCG...ATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR GCA 90 bp GCTCTGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTGACGGTGGCCATCCAGCTGAGCCGAAATaGTTTCCACCCTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: ALGFQKLKGFRPMPDGGHPAEPK*FPPSSH
Trigger: ATGTGAGGAGGGTGGAAAGCATTTCGGCTCAGCTGG...ATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR TCA 90 bp TGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTGACGGTGGCCATCTCCTGGGAGCATCTTCTTTaGGGACAGGATATGTACATT +
Preference number: 4 (lower is better)
Translates to: WASRSSRASGRCLTVAISWEHLL*GQDMYI
Trigger: AATGTACATATCCTGTCCTCAAAGAAGATGCTCCCA...GGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR CCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTGCCCGGGGGCGTCCGTaGCGCTGGGAGCGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVAARGRP*RWEREL
Trigger: AAGCTCTCGCTCCCAGCGCCACGGACGCCCCCGGGC...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS-3UTR GCA 90 bp GCTCTGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTGACGGTGGCCATACATTTTCAAAGAGCTaGATGGAGCGCATTATGTTT +
Preference number: 4 (lower is better)
Translates to: ALGFQKLKGFRPMPDGGHTFSKS*MERIMF
Trigger: AAACATAATGCGCTCCATGCAGCTCTTTGAAAATGT...ATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR GCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACGTCTGTCCACGGGTCTaGACGGGAGCGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNVCPRV*TGAHRR
Trigger: GCGGCGGTGCGCTCCCGTGCAGACCCGTGGACAGAC...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382152.7
ENST00000447367.6
CDS-3UTR TCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGCTTCAGGCCGATGCCTaGCGGTGGCCATCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVLQADA*RWPSPV
Trigger: AACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAG...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp TGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGGTTTCTTTCTTTGTCCCTAGGGCTTCAGGCCGATaGCTGACGGTGGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: CCLFLVDSGVVKVSFFVPRASGR*LTVAIS
Trigger: GGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCT...AGGGACAAAGAAAGAAACCTTGACTACCCCACTGTCTACTAAGAACAAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR GCA 90 bp TGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTGACGGTGGCCATCTCCATTGAACAGAAAATGTaGATATGTTGTAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: WASRSSRASGRCLTVAISIEQKM*ICCRVS
Trigger: GGAGACTCTACAACATATGCACATTTTCTGTTCAAT...GGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR GCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACCCGGGTGCTGCTCTCTaGAACCAGAGGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHPGAAL*NQRLPC
Trigger: GCAGGGCAGCCTCTGGTTGCAGAGAGCAGCACCCGG...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS-3UTR CCA 90 bp AGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACGGGCGTCCGTGGCGCTaGGAGCGAGAGCTTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RGQIWPLMLLGLLVIKHYGRPWR*ERELRR
Trigger: CCGCCGAAGCTCTCGCTCCCAGCGCCACGGACGCCC...GTAATGCTTAATAACAAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS-3UTR TCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGCGCTTGGTGCTGTTCTaGGCGTACAGGAAACCGCCT +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVRLVLF*AYRKPP
Trigger: AGGCGGTTTCCTGTACGCTCAGAACAGCACCAAGCG...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS-3UTR GCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACAGGGCTTCAGGCCGATaGCTGACGGTGGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHRASGR*LTVAIS
Trigger: GGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCT...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTAGTCTGTCCACGGGTCTaGACGGGAGCGCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLVCPRV*TGAHRR
Trigger: GCGGCGGTGCGCTCCCGTGCAGACCCGTGGACAGAC...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382152.7
ENST00000447367.6
CDS-3UTR TCA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGACTTCAGGCCGATGCCTaGCGGTGGCCATCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGLQADA*RWPSPV
Trigger: AACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAG...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGAGAGTCAACATCCTCTaGGCTGGCAGAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVRVNIL*AGRASQ
Trigger: CTGGGATGCTCTGCCAGCTCAGAGGATGTTGACTCT...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS-3UTR TCA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTCCGACCACAGCCACTaGGAAGTGCTCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTSDHSH*EVLLCL
Trigger: CAGGCAGAGGAGCACTTCTCAGTGGCTGTGGTCGGA...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382150.8
CDS-3UTR CCA 90 bp TGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGGTTTCTTTCTTTGTCCCTGTAGTAACCCAGCTCTaGTTCGGCTCGGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: CCLFLVDSGVVKVSFFVPVVTQL*FGSASP
Trigger: AGGGGATGCCGAGCCGAACCAGAGCTGGGTTACTAC...AGGGACAAAGAAAGAAACCTTGACTACCCCACTGTCTACTAAGAACAAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR TCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACCTTCAGGCCGATGCCTaGCGGTGGCCATCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNLQADA*RWPSPV
Trigger: AACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAG...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGACGTCTGGACACACTTaGCTGGGTTCTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVTSGHT*LGSLLR
Trigger: TCTCAGCAGAGAACCCAGTCAAGTGTGTCCAGACGT...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS-3UTR TCA 90 bp TACTATATACTGGAGGATAGATATCCTGACCCTTTGCATATGTCTGTAAACATCCTGGCCTCCTCCAGCTaGGCCGAAATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: YYILEDRYPDPLHMSVNILASSS*AEMLST
Trigger: GGTGGAAAGCATTTCGGCTCAGCTGGAGGAGGCCAG...GATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382152.7
ENST00000447367.6
CDS-3UTR TCA 90 bp ACAGCTCCATTGTGGTCTGTATCAAATGCATTGAACAGAAAATGTGCATATGTTCTGGCCTCCTCCAGCTaGGCCGAAATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: TAPLWSVSNALNRKCAYVLASSS*AEMLST
Trigger: GGTGGAAAGCATTTCGGCTCAGCTGGAGGAGGCCAG...AACATATGCACATTTTCTGTTCAATGCATTTGATACAGACCACAATGGAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR GCA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAAGGGCTTCAGGCCGATaGCTGACGGTGGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKRASGR*LTVAIS
Trigger: GGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCT...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGACAATACCCACTGTTTaGAGTCCTTCGGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVTIPTV*SPSDSH
Trigger: GTGGGAGTCCGAAGGACTGCAAACAGTGGGTATTGT...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS-3UTR GCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTTCTAGGGACGCAGGGTaGAGAAGCGAGACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVASRDAG*RSETRE
Trigger: CTCTCGAGTCTCGCTTCTGCACCCTGCGTCCCTAGA...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382152.7
ENST00000447367.6
CDS-3UTR GCA 90 bp AGGAAGTCAGGGGAAAGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTCCAGCTGAGCCGAAATaGTTTCCACCCTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: RKSGERGQIWPLMLLGLLPAEPK*FPPSSH
Trigger: ATGTGAGGAGGGTGGAAAGCATTTCGGCTCAGCTGG...AAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCCCCTGACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS-3UTR CCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCAACATCCTCTGAGCTaGCAGAGCATCCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVAQHPLS*QSIPAS
Trigger: GGAGGCTGGGATGCTCTGCCAGCTCAGAGGATGTTG...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS-3UTR TCA 90 bp AGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACCTTCAGGCCGATGCCTaGCGGTGGCCATCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RGQIWPLMLLGLLVIKHYLQADA*RWPSPV
Trigger: AACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAG...GTAATGCTTAATAACAAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAACTTCAGGCCGATGCCTaGCGGTGGCCATCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKLQADA*RWPSPV
Trigger: AACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAG...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTACTGGCCTCCTCCAGCTaGGCCGAAATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLLASSS*AEMLST
Trigger: GGTGGAAAGCATTTCGGCTCAGCTGGAGGAGGCCAG...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382152.7
ENST00000447367.6
CDS-3UTR GCA 90 bp ATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTACCAGCTGAGCCGAAATaGTTTCCACCCTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: MLQCQAEQSMLKVVAPTLPAEPK*FPPSSH
Trigger: ATGTGAGGAGGGTGGAAAGCATTTCGGCTCAGCTGG...TAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382152.7
ENST00000447367.6
CDS-3UTR GCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACTCTGCAACCAGAGGCTaGCCTGCATTCCTTCTCACA +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHSATRG*PAFLLT
Trigger: TGTGAGAAGGAATGCAGGGCAGCCTCTGGTTGCAGA...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS-3UTR TCA 90 bp TTTCAGTGTACATGTATTGTACTACTCTTAATTTCTACACTGGTGATAGCAGGGCGACGTTTTGGCAGCTaGGCAGGGCAAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: FQCTCIVLLLISTLVIAGRRFGS*AGQELH
Trigger: ATGAAGCTCTTGCCCTGCTCAGCTGCCAAAACGTCG...CCCTGCTATCACCAGTGTAGAAATTAAGAGTAGTACAATACATGTACACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS-3UTR GCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACCTTAGGACCAGCCACTaGTCACCGATGCTTACACAG +
Preference number: 4 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNLRTSH*SPMLTQ
Trigger: CTGTGTAAGCATCGGTGAGCAGTGGCTGGTCCTAAG...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359001.9
CDS-3UTR GCA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGATGGCAACAGACAGGCTaGCGGTTCACACTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGWQQTG*RFTLVV
Trigger: TACTACAAGTGTGAACCGGCAGCCTGTCTGTTGCCA...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR GCA 90 bp AGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACTCTAGGGACGCAGGGTaGAGAAGCGAGACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: RGQIWPLMLLGLLVIKHYSRDAG*RSETRE
Trigger: CTCTCGAGTCTCGCTTCTGCACCCTGCGTCCCTAGA...GTAATGCTTAATAACAAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS-3UTR CCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGTTGGTAAATTTGCTCTaGGCTTCCAGAAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVLVNLL*ASRSSR
Trigger: CCTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAA...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp TTTGTGATATTTCTACAAAACAGGGACGATGTGTGTGGCTTTAGTAATGTGGCAGCCACTGCTCACCGATaGTTACACAGAGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: FVIFLQNRDDVCGFSNVAATAHR*LHRATK
Trigger: CTTTGTTGCTCTGTGTAAGCATCGGTGAGCAGTGGC...TGCCACATTACTAAAGCCACACACATCGTCCCTGTTTTGTAGAAATATCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359001.9
CDS-3UTR GCA 90 bp TGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGGTTTCTTTCTTTGTCCCTAGTTTATGCACAGGCTaGCTTACAACTCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: CCLFLVDSGVVKVSFFVPSLCTG*LTTPVE
Trigger: TTCCACAGGAGTTGTAAGGCAGCCTGTGCATAAACT...AGGGACAAAGAAAGAAACCTTGACTACCCCACTGTCTACTAAGAACAAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR CCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGTGTAGAGTCTCCCTGTaGAAAGAACTGCGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVCRVSL*KELRVN
Trigger: ATTTACTCGCAGTTCTTTCCACAGGGAGACTCTACA...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp AAGGATCTGAAGCTCTTTCTTGGTAAATTTGCTCTGGGCTTCCAGAAGCTCAAGTGTAGAGTCTCCCTGTaGAAAGAACTGCGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: KDLKLFLGKFALGFQKLKCRVSL*KELRVN
Trigger: ATTTACTCGCAGTTCTTTCCACAGGGAGACTCTACA...CTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGAGCTTCAGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR CCA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTAGACCAAGTTCTTCTGTaGCAACAGACAGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLDQVLL*QQTGCR
Trigger: CCGGCAGCCTGTCTGTTGCCACAGAAGAACTTGGTC...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR CCA 90 bp AGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACCAGGAGACGACGTTTTaGCAGCTGAGCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RGQIWPLMLLGLLVIKHYQETTF*QLSRAR
Trigger: TCTTGCCCTGCTCAGCTGCCAAAACGTCGTCTCCTG...GTAATGCTTAATAACAAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS-3UTR CCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACGGCTGGGCTCTTATCTaGAAGTTCCAAGGACTAATC +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHGWALI*KFQGLI
Trigger: GATTAGTCCTTGGAACTTCCAGATAAGAGCCCAGCC...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS-3UTR GCA 90 bp CTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTATATACAGCCACTGAGAAGTaGTCCTCTGCCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LICESLNNPMAKEPIKLYTATEK*SSAWLS
Trigger: AGAAAGCCAGGCAGAGGAGCACTTCTCAGTGGCTGT...ATATAGTTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382150.8
CDS-3UTR GCA 90 bp CTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTATATAACCAGAGGCTGCCCTaGATTCCTTCTCACACAGAG +
Preference number: 4 (lower is better)
Translates to: LICESLNNPMAKEPIKLYNQRLP*IPSHTE
Trigger: CTCTGTGTGAGAAGGAATGCAGGGCAGCCTCTGGTT...ATATAGTTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS-3UTR CCA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTGGTAAATTTGCTCTaGGCTTCCAGAAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTLVNLL*ASRSSR
Trigger: CCTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAA...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACTTGGTAAATTTGCTCTaGGCTTCCAGAAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHLVNLL*ASRSSR
Trigger: CCTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAA...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp ATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTATTGGTAAATTTGCTCTaGGCTTCCAGAAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: MLQCQAEQSMLKVVAPTLLVNLL*ASRSSR
Trigger: CCTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAA...TAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp TGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGGTTTCTTTCTTTGTCCCTTGTAGAGTCTCCCTGTaGAAAGAACTGCGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: CCLFLVDSGVVKVSFFVPCRVSL*KELRVN
Trigger: ATTTACTCGCAGTTCTTTCCACAGGGAGACTCTACA...AGGGACAAAGAAAGAAACCTTGACTACCCCACTGTCTACTAAGAACAAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CCA 90 bp AACAACACCACTGGGGCATTCATTCTTAAATCCTCTGTAAAGGATCTGAAGCTCCTCACAGCTCCATTGTaGTCTGTATCAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: NNTTGAFILKSSVKDLKLLTAPL*SVSNAL
Trigger: CAATGCATTTGATACAGACCACAATGGAGCTGTGAG...GAGCTTCAGATCCTTTACAGAGGATTTAAGAATGAATGCCCCAGTGGTGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR CCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTTCTTAGTAGACAGTaGGGTAGTCAAGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVVLSRQ*GSQGFF
Trigger: AAAGAAACCTTGACTACCCCACTGTCTACTAAGAAC...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACCAGACCCCTTTGGAGTaGAGGGAGTTAATTACAGAA +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHQTPLE*RELITE
Trigger: TTCTGTAATTAACTCCCTCCACTCCAAAGGGGTCTG...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS-3UTR TCA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTGGGAGCATCTTCTTTaGGGACAGGATATGTACATT +
Preference number: 4 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTWEHLL*GQDMYI
Trigger: AATGTACATATCCTGTCCTCAAAGAAGATGCTCCCA...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGATGGGAGCATCTTCTTTaGGGACAGGATATGTACATT +
Preference number: 4 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGWEHLL*GQDMYI
Trigger: AATGTACATATCCTGTCCTCAAAGAAGATGCTCCCA...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACGCTTCAGTGTCAAGCTaGGCAATCTATGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHASVSS*AIYAKS
Trigger: ACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGC...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp TTGCTTGCTAATTTTGCTTGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGGCTTCAGTGTCAAGCTaGGCAATCTATGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LLANFACCLFLVDSGVVKASVSS*AIYAKS
Trigger: ACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGC...CTTGACTACCCCACTGTCTACTAAGAACAAACAGCAAGCAAAATTAGCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGAGCTTCAGTGTCAAGCTaGGCAATCTATGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGASVSS*AIYAKS
Trigger: ACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGC...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTCACAGAGTATGAAATaGGTTAGACCATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTSQSMK*VRPSPE
Trigger: TTCAGGGGATGGTCTAACTCATTTCATACTCTGTGA...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGATCACAGAGTATGAAATaGGTTAGACCATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGSQSMK*VRPSPE
Trigger: TTCAGGGGATGGTCTAACTCATTTCATACTCTGTGA...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGAATATTCACAGAGTATaGAATGAGTTAGACCATCCC +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVNIHRV*NELDHP
Trigger: GGGATGGTCTAACTCATTTCATACTCTGTGAATATT...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp AGGAAGTCAGGGGAAAGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTCATCCTTGTTTTGTTTaGTGCCTTCTTCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: RKSGERGQIWPLMLLGLLHPCFV*CLLQLP
Trigger: TGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATG...AAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCCCCTGACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp TTGCTTGCTAATTTTGCTTGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGGCCTCTTGGTCTTTGTaGTATTTCTACAAAACAGGG +
Preference number: 4 (lower is better)
Translates to: LLANFACCLFLVDSGVVKASWSL*YFYKTG
Trigger: CCCTGTTTTGTAGAAATATCACAAAGACCAAGAGGC...CTTGACTACCCCACTGTCTACTAAGAACAAACAGCAAGCAAAATTAGCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp AGGAAGTCAGGGGAAAGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTTACACAAACACGTaGTGGCAAATTTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: RKSGERGQIWPLMLLGLLVYTNT*WQISVY
Trigger: GTACACTGAAATTTGCCATCACGTGTTTGTGTAAAC...AAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCCCCTGACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTATCAGTCCCAGCAAATaGAGAAGCTTCAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVAISPSK*RSFRDA
Trigger: TGCATCTCTGAAGCTTCTTCATTTGCTGGGACTGAT...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS-3UTR TCA 90 bp CTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTATATGACTGGGTTCTCTGCTaGGAATCTCACAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LICESLNNPMAKEPIKLYDWVLC*ESHRLK
Trigger: TTTCAGCCTGTGAGATTCTCAGCAGAGAACCCAGTC...ATATAGTTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS-3UTR GCA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGTGTTGCAAAGACAGTTaGAAATTTCCTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVCCKDS*KFPPSV
Trigger: TACAGAAGGAGGAAATTTGCAACTGTCTTTGCAACA...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTTTGGTAAATTTGCTCTaGGCTTCCAGAAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVALVNLL*ASRSSR
Trigger: CCTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAA...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTGTAGAGTCTCCCTGTaGAAAGAACTGCGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTCRVSL*KELRVN
Trigger: ATTTACTCGCAGTTCTTTCCACAGGGAGACTCTACA...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGACTCACAGCTCCATTGTaGTCTGTATCAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGLTAPL*SVSNAL
Trigger: CAATGCATTTGATACAGACCACAATGGAGCTGTGAG...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACCTCACAGCTCCATTGTaGTCTGTATCAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHLTAPL*SVSNAL
Trigger: CAATGCATTTGATACAGACCACAATGGAGCTGTGAG...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp AGGAAGTCAGGGGAAAGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTCTTAGTAGACAGTaGGGTAGTCAAGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RKSGERGQIWPLMLLGLLVLSRQ*GSQGFF
Trigger: AAAGAAACCTTGACTACCCCACTGTCTACTAAGAAC...AAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCCCCTGACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTTGGGAGCATCTTCTTTaGGGACAGGATATGTACATT +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVAWEHLL*GQDMYI
Trigger: AATGTACATATCCTGTCCTCAAAGAAGATGCTCCCA...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTTCACAGAGTATGAAATaGGTTAGACCATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVASQSMK*VRPSPE
Trigger: TTCAGGGGATGGTCTAACTCATTTCATACTCTGTGA...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACTCACAGAGTATGAAATaGGTTAGACCATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNSQSMK*VRPSPE
Trigger: TTCAGGGGATGGTCTAACTCATTTCATACTCTGTGA...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp ATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTACATCCTTGTTTTGTTTaGTGCCTTCTTCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: MLQCQAEQSMLKVVAPTLHPCFV*CLLQLP
Trigger: TGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATG...TAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR TCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTGCCTCTTGGTCTTTGTaGTATTTCTACAAAACAGGG +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVAASWSL*YFYKTG
Trigger: CCCTGTTTTGTAGAAATATCACAAAGACCAAGAGGC...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTGTTTACACAAACACGTaGTGGCAAATTTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTVYTNT*WQISVY
Trigger: GTACACTGAAATTTGCCATCACGTGTTTGTGTAAAC...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACGTTTACACAAACACGTaGTGGCAAATTTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHVYTNT*WQISVY
Trigger: GTACACTGAAATTTGCCATCACGTGTTTGTGTAAAC...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp TTTCAGTGTACATGTATTGTACTACTCTTAATTTCTACACTGGTGATAGCAGGGAACAAGGTATTCCTCTaGGGAGAGCCAGAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: FQCTCIVLLLISTLVIAGNKVFL*GEPEVF
Trigger: AAAGACTTCTGGCTCTCCTCAGAGGAATACCTTGTT...CCCTGCTATCACCAGTGTAGAAATTAAGAGTAGTACAATACATGTACACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR GCA 90 bp TGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGGTTTCTTTCTTTGTCCCTACATTTTCAAAGAGCTaGATGGAGCGCATTATGTTT +
Preference number: 4 (lower is better)
Translates to: CCLFLVDSGVVKVSFFVPTFSKS*MERIMF
Trigger: AAACATAATGCGCTCCATGCAGCTCTTTGAAAATGT...AGGGACAAAGAAAGAAACCTTGACTACCCCACTGTCTACTAAGAACAAACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTTGTAGAGTCTCCCTGTaGAAAGAACTGCGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVACRVSL*KELRVN
Trigger: ATTTACTCGCAGTTCTTTCCACAGGGAGACTCTACA...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCTCACAGCTCCATTGTaGTCTGTATCAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVALTAPL*SVSNAL
Trigger: CAATGCATTTGATACAGACCACAATGGAGCTGTGAG...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp AGGAAGTCAGGGGAAAGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTAGCATTACTATATACTaGAGGATAGATATCCTGACC +
Preference number: 4 (lower is better)
Translates to: RKSGERGQIWPLMLLGLLSITIY*RIDILT
Trigger: GGTCAGGATATCTATCCTCCAGTATATAGTAATGCT...AAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCCCCTGACTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACAAATCCAAGTATAGCTaGCTGGGCTCTTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNKSKYS*LGSYLE
Trigger: TTCCAGATAAGAGCCCAGCCAGCTATACTTGGATTT...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS-3UTR TCA 90 bp TACTATATACTGGAGGATAGATATCCTGACCCTTTGCATATGTCTGTAAACATCTGGGAGCATCTTCTTTaGGGACAGGATATGTACATT +
Preference number: 4 (lower is better)
Translates to: YYILEDRYPDPLHMSVNIWEHLL*GQDMYI
Trigger: AATGTACATATCCTGTCCTCAAAGAAGATGCTCCCA...GATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR TCA 90 bp CCTTTGCATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCTCACAGAGTATGAAATaGGTTAGACCATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PLHMSVNILVLFDAFFNFSQSMK*VRPSPE
Trigger: TTCAGGGGATGGTCTAACTCATTTCATACTCTGTGA...GAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR TCA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTAATATTCACAGAGTATaGAATGAGTTAGACCATCCC +
Preference number: 4 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTNIHRV*NELDHP
Trigger: GGGATGGTCTAACTCATTTCATACTCTGTGAATATT...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp TACTATATACTGGAGGATAGATATCCTGACCCTTTGCATATGTCTGTAAACATCGCCTCTTGGTCTTTGTaGTATTTCTACAAAACAGGG +
Preference number: 4 (lower is better)
Translates to: YYILEDRYPDPLHMSVNIASWSL*YFYKTG
Trigger: CCCTGTTTTGTAGAAATATCACAAAGACCAAGAGGC...GATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR GCA 90 bp AGGAAGTCAGGGGAAAGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTATTGAACAGAAAATGTaGATATGTTGTAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RKSGERGQIWPLMLLGLLIEQKM*ICCRVS
Trigger: GGAGACTCTACAACATATGCACATTTTCTGTTCAAT...AAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCCCCTGACTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR GCA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGAACATTTTCAAAGAGCTaGATGGAGCGCATTATGTTT +
Preference number: 4 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGTFSKS*MERIMF
Trigger: AAACATAATGCGCTCCATGCAGCTCTTTGAAAATGT...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp TTGCTTGCTAATTTTGCTTGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGTGTTGCAAAGACAGTTaGAAATTTCCTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLANFACCLFLVDSGVVKCCKDS*KFPPSV
Trigger: TACAGAAGGAGGAAATTTGCAACTGTCTTTGCAACA...CTTGACTACCCCACTGTCTACTAAGAACAAACAGCAAGCAAAATTAGCAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR GCA 90 bp CCTTTGCATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCTTCTGTCTCAGTTTATaGACAGGCTGCCTTACAACT +
Preference number: 4 (lower is better)
Translates to: PLHMSVNILVLFDAFFNFFCLSL*TGCLTT
Trigger: AGTTGTAAGGCAGCCTGTGCATAAACTGAGACAGAA...GAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR GCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACAATGACGATCAGAACTaGTATCATTTCAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNNDDQN*YHFKPF
Trigger: GAAGGGCTTGAAATGATAGCAGTTCTGATCGTCATT...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382150.8
CDS-3UTR CCA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGAAGCATTACTATATACTaGAGGATAGATATCCTGACC +
Preference number: 4 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGSITIY*RIDILT
Trigger: GGTCAGGATATCTATCCTCCAGTATATAGTAATGCT...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACAGCATTACTATATACTaGAGGATAGATATCCTGACC +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHSITIY*RIDILT
Trigger: GGTCAGGATATCTATCCTCCAGTATATAGTAATGCT...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACGAAAGAGGACAGATTTaGCCTTTAATGCTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNERGQI*PLMLLG
Trigger: TCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTC...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
3UTR CAA 72 bp AGACCTTTGATGAAATCCTCGAAACTCACAGCTCCATaGTGGTCTGTATCAAATGCATTGAACAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: RPLMKSSKLTAP*WSVSNALNRKC
Trigger: ACATTTTCTGTTCAATGCATTTGATACAGACCACAATGGAGCTGTGAGTTTCGAGGATTTCATCAAAGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR TCA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAATGGGAGCATCTTCTTTaGGGACAGGATATGTACATT +
Preference number: 4 (lower is better)
Translates to: KSLICESLNNPMAKEPIKWEHLL*GQDMYI
Trigger: AATGTACATATCCTGTCCTCAAAGAAGATGCTCCCA...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAATGGGAGCATCTTCTTTaGGGACAGGATATGTACATT +
Preference number: 4 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKWEHLL*GQDMYI
Trigger: AATGTACATATCCTGTCCTCAAAGAAGATGCTCCCA...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGCTTCAGTGTCAAGCTaGGCAATCTATGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKASVSS*AIYAKS
Trigger: ACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGC...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTAGCTTCAGTGTCAAGCTaGGCAATCTATGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLASVSS*AIYAKS
Trigger: ACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGC...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR TCA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAATCACAGAGTATGAAATaGGTTAGACCATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: KSLICESLNNPMAKEPIKSQSMK*VRPSPE
Trigger: TTCAGGGGATGGTCTAACTCATTTCATACTCTGTGA...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTAATATTCACAGAGTATaGAATGAGTTAGACCATCCC +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVANIHRV*NELDHP
Trigger: GGGATGGTCTAACTCATTTCATACTCTGTGAATATT...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR TCA 90 bp TACTATATACTGGAGGATAGATATCCTGACCCTTTGCATATGTCTGTAAACATCAACCTGTTAATAGTCTaGGAAGGTACTGGGCAAATT +
Preference number: 4 (lower is better)
Translates to: YYILEDRYPDPLHMSVNINLLIV*EGTGQI
Trigger: AATTTGCCCAGTACCTTCTCAGACTATTAACAGGTT...GATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR TCA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAATCCACGCTGTCTGTATaGAGAGAACCTGTTAATAGT +
Preference number: 4 (lower is better)
Translates to: KSLICESLNNPMAKEPIKSTLSV*REPVNS
Trigger: ACTATTAACAGGTTCTCTTCATACAGACAGCGTGGA...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR GCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTGAACAGAAAATGTaGATATGTTGTAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHIEQKM*ICCRVS
Trigger: GGAGACTCTACAACATATGCACATTTTCTGTTCAAT...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGAATTGAACAGAAAATGTaGATATGTTGTAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGIEQKM*ICCRVS
Trigger: GGAGACTCTACAACATATGCACATTTTCTGTTCAAT...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp ATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAATTGAACAGAAAATGTaGATATGTTGTAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: MLQCQAEQSMLKVVAPTLIEQKM*ICCRVS
Trigger: GGAGACTCTACAACATATGCACATTTTCTGTTCAAT...TAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACACATTTTCAAAGAGCTaGATGGAGCGCATTATGTTT +
Preference number: 4 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNTFSKS*MERIMF
Trigger: AAACATAATGCGCTCCATGCAGCTCTTTGAAAATGT...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTACATTTTCAAAGAGCTaGATGGAGCGCATTATGTTT +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVATFSKS*MERIMF
Trigger: AAACATAATGCGCTCCATGCAGCTCTTTGAAAATGT...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTATGTAGAGTCTCCCTGTaGAAAGAACTGCGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLCRVSL*KELRVN
Trigger: ATTTACTCGCAGTTCTTTCCACAGGGAGACTCTACA...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CCA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAATGTAGAGTCTCCCTGTaGAAAGAACTGCGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKCRVSL*KELRVN
Trigger: ATTTACTCGCAGTTCTTTCCACAGGGAGACTCTACA...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp CTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTATATCTCACAGCTCCATTGTaGTCTGTATCAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: LICESLNNPMAKEPIKLYLTAPL*SVSNAL
Trigger: CAATGCATTTGATACAGACCACAATGGAGCTGTGAG...ATATAGTTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTCACAGCTCCATTGTaGTCTGTATCAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: KSLICESLNNPMAKEPIKLTAPL*SVSNAL
Trigger: CAATGCATTTGATACAGACCACAATGGAGCTGTGAG...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp ATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTATTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 4 (lower is better)
Translates to: MLQCQAEQSMLKVVAPTLFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...TAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACTTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 4 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTAGCATTACTATATACTaGAGGATAGATATCCTGACC +
Preference number: 4 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVASITIY*RIDILT
Trigger: GGTCAGGATATCTATCCTCCAGTATATAGTAATGCT...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CCA 90 bp TTTCAGTGTACATGTATTGTACTACTCTTAATTTCTACACTGGTGATAGCAGGGGAAAGAGGACAGATTTaGCCTTTAATGCTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: FQCTCIVLLLISTLVIAGERGQI*PLMLLG
Trigger: TCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTC...CCCTGCTATCACCAGTGTAGAAATTAAGAGTAGTACAATACATGTACACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CCA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACAGTCTGAGAAGGTACTaGGCAAATTTCAGTATTTCA +
Preference number: 4 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNSLRRY*ANFSIS
Trigger: TGAAATACTGAAATTTGCCCAGTACCTTCTCAGACT...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR TCA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTACATCCTTGTTTTGTTTaGTGCCTTCTTCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLHPCFV*CLLQLP
Trigger: TGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATG...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR TCA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACATCCTTGTTTTGTTTaGTGCCTTCTTCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: KSLICESLNNPMAKEPIKHPCFV*CLLQLP
Trigger: TGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATG...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR GCA 90 bp TTTCAGTGTACATGTATTGTACTACTCTTAATTTCTACACTGGTGATAGCAGGGACATTTTCAAAGAGCTaGATGGAGCGCATTATGTTT +
Preference number: 4 (lower is better)
Translates to: FQCTCIVLLLISTLVIAGTFSKS*MERIMF
Trigger: AAACATAATGCGCTCCATGCAGCTCTTTGAAAATGT...CCCTGCTATCACCAGTGTAGAAATTAAGAGTAGTACAATACATGTACACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR GCA 90 bp TACTATATACTGGAGGATAGATATCCTGACCCTTTGCATATGTCTGTAAACATCTGTTGCAAAGACAGTTaGAAATTTCCTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: YYILEDRYPDPLHMSVNICCKDS*KFPPSV
Trigger: TACAGAAGGAGGAAATTTGCAACTGTCTTTGCAACA...GATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CCA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTAGAAAGAGGACAGATTTaGCCTTTAATGCTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLERGQI*PLMLLG
Trigger: TCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTC...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CCA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTTCTTAGTAGACAGTaGGGTAGTCAAGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKVLSRQ*GSQGFF
Trigger: AAAGAAACCTTGACTACCCCACTGTCTACTAAGAAC...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp AGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACAATATTCACAGAGTATaGAATGAGTTAGACCATCCC +
Preference number: 4 (lower is better)
Translates to: RGQIWPLMLLGLLVIKHYNIHRV*NELDHP
Trigger: GGGATGGTCTAACTCATTTCATACTCTGTGAATATT...GTAATGCTTAATAACAAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR TCA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTAAATATTCACAGAGTATaGAATGAGTTAGACCATCCC +
Preference number: 4 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLNIHRV*NELDHP
Trigger: GGGATGGTCTAACTCATTTCATACTCTGTGAATATT...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR GCA 90 bp TACTATATACTGGAGGATAGATATCCTGACCCTTTGCATATGTCTGTAAACATCATTGAACAGAAAATGTaGATATGTTGTAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: YYILEDRYPDPLHMSVNIIEQKM*ICCRVS
Trigger: GGAGACTCTACAACATATGCACATTTTCTGTTCAAT...GATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CCA 90 bp TACTATATACTGGAGGATAGATATCCTGACCCTTTGCATATGTCTGTAAACATCTTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 4 (lower is better)
Translates to: YYILEDRYPDPLHMSVNIFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...GATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
3UTR CAA 72 bp CATTACTATATACTGGAGGATAGATATCCTGACCCTTaGCATATGTCTGTAAACATCCTTGTTTTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: HYYILEDRYPDP*HMSVNILVLFD
Trigger: ATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR GCA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAATTGAACAGAAAATGTaGATATGTTGTAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKIEQKM*ICCRVS
Trigger: GGAGACTCTACAACATATGCACATTTTCTGTTCAAT...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR GCA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAAATTGAACAGAAAATGTaGATATGTTGTAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KSLICESLNNPMAKEPIKIEQKM*ICCRVS
Trigger: GGAGACTCTACAACATATGCACATTTTCTGTTCAAT...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAATTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 4 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CCA 90 bp CTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTATATTTCACATTTGTCTGTTaGATTCAGGATCTATTTGAC +
Preference number: 4 (lower is better)
Translates to: LICESLNNPMAKEPIKLYFTFVC*IQDLFD
Trigger: GTCAAATAGATCCTGAATCCAACAGACAAATGTGAA...ATATAGTTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS GCA 90 bp GAAATGCTTTCCACCCTCCTCACATTCATGTCTAGGGACGCAGGGTaGAGAAGCGAGACTCGAGAGTCCACCGGCCAGGGGCGTCTGTCC +
Preference number: 5 (lower is better)
Translates to: EMLSTLLTFMSRDAG*RSETRESTGQGRLS
Trigger: GGACAGACGCCCCTGGCCGGTGGACTCTCGAGTCTCGCTTCTGCACCCTGCGTCCCTAGACATGAATGTGAGGAGGGTGGAAAGCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382152.7
ENST00000447367.6
CDS TCA 90 bp ACTGTTTGCAGTCCTTCGGACTCCCACTCCAGAGTCAACATCCTCTaGGCTGGCAGAGCATCCCAGCCTCCAGACCCCTTTGGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: TVCSPSDSHSRVNIL*AGRASQPPDPFGVE
Trigger: CTCCACTCCAAAGGGGTCTGGAGGCTGGGATGCTCTGCCAGCTCAGAGGATGTTGACTCTGGAGTGGGAGTCCGAAGGACTGCAAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS TCA 90 bp AGTTCATCTTCCACGCTGTCGCCTGTAGAGCTGGCCTCCTCCAGCTaGGCCGAAATGCTTTCCACCCTCCTCACATTCATGTCTAGGGAC +
Preference number: 5 (lower is better)
Translates to: SSSSTLSPVELASSS*AEMLSTLLTFMSRD
Trigger: GTCCCTAGACATGAATGTGAGGAGGGTGGAAAGCATTTCGGCTCAGCTGGAGGAGGCCAGCTCTACAGGCGACAGCGTGGAAGATGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447367.6
CDS GCA 90 bp GCTTCTCAGTGTGGTGACCAAGTTCTTCTGTGGCAACAGACAGGCTaGCGGTTCACACTTGTAGTAACCCAGCTCTGGTTCGGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: ASQCGDQVLLWQQTG*RFTLVVTQLWFGSA
Trigger: TGCCGAGCCGAACCAGAGCTGGGTTACTACAAGTGTGAACCGGCAGCCTGTCTGTTGCCACAGAAGAACTTGGTCACCACACTGAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS GCA 90 bp GAGGTCACAATTGCATTGCTAGCTGTCAAACCGGGTGCTGCTCTCTaGAACCAGAGGCTGCCCTGCATTCCTTCTCACACAGAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: EVTIALLAVKPGAAL*NQRLPCIPSHTEPP
Trigger: TGGAGGCTCTGTGTGAGAAGGAATGCAGGGCAGCCTCTGGTTGCAGAGAGCAGCACCCGGTTTGACAGCTAGCAATGCAATTGTGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509207.1
ENST00000629874.1
CDS TCA 90 bp ATTTGCTCTGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTaGCGGTGGCCATCTCCAGTTCATCTTCCACGCTGTAGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: ICSGLPEAQGLQADA*RWPSPVHLPRCSSV
Trigger: TACAGAACTACAGCGTGGAAGATGAACTGGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCAGAGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS-3UTR CAA 90 bp TGGGCTTCCAGAAGCTCAAGGGCTTCAGGCCGATGCCTGACGGTGGCCATCTCCAAACTCACAGCTCCATaGTGGTCTGTATCAAATGCA +
Preference number: 5 (lower is better)
Translates to: WASRSSRASGRCLTVAISKLTAP*WSVSNA
Trigger: TGCATTTGATACAGACCACAATGGAGCTGTGAGTTT...GGAGATGGCCACCGTCAGGCATCGGCCTGAAGCCCTTGAGCTTCTGGAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS TCA 90 bp CATTTGTTTCAGGTGGGAGGTAAATCTGGTTCCTTGATGATGATCTaGCAGGTGCTCCCACTTCCGAAGTCTCCCTCTGGGACCACTGGG +
Preference number: 5 (lower is better)
Translates to: HLFQVGGKSGSLMMI*QVLPLPKSPSGTTG
Trigger: CCCAGTGGTCCCAGAGGGAGACTTCGGAAGTGGGAGCACCTGTCAGATCATCATCAAGGAACCAGATTTACCTCCCACCTGAAACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512102.1
CDS TCA 90 bp TACAACAGTAACAGGGAGGTGAGAAAACACGGCTTCTCAGTGTGGTaGCCAAGTTCTTCTGTGGCAACAGACAGGCTGCCGGTTCACACT +
Preference number: 5 (lower is better)
Translates to: YNSNREVRKHGFSVW*PSSSVATDRLPVHT
Trigger: AGTGTGAACCGGCAGCCTGTCTGTTGCCACAGAAGAACTTGGTCACCACACTGAGAAGCCGTGTTTTCTCACCTCCCTGTTACTGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS TCA 90 bp ATCTTCCACGCTGTTTTGAATAGCAGGAGACGACGTTTTGGCAGCTaGGCAGGGCAAGAGCTTCATGAGCCGCTCTTTAATGCTGCGCTT +
Preference number: 5 (lower is better)
Translates to: IFHAVLNSRRRRFGS*AGQELHEPLFNAAL
Trigger: AAGCGCAGCATTAAAGAGCGGCTCATGAAGCTCTTGCCCTGCTCAGCTGCCAAAACGTCGTCTCCTGCTATTCAAAACAGCGTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS TCA 90 bp ATCTTCCACGTTGCTTTGAATAGCAGGAGACGACGTTTTGGCAGCTaGGCAGGGCAAGAGCTTCATGAGCCGCTCTTTAATGCTGCGCTT +
Preference number: 5 (lower is better)
Translates to: IFHVALNSRRRRFGS*AGQELHEPLFNAAL
Trigger: AAGCGCAGCATTAAAGAGCGGCTCATGAAGCTCTTGCCCTGCTCAGCTGCCAAAACGTCGTCTCCTGCTATTCAAAGCAACGTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515373.1
CDS TCA 90 bp CTTCCAAGTTCATGGTCAGCTAGGTCATGGTCCGACCACAGCCACTaGGAAGTGCTCCTCTGCCTGGCTTTCTTTGTAAAGCCATTAAAC +
Preference number: 5 (lower is better)
Translates to: LPSSWSARSWSDHSH*EVLLCLAFFVKPLN
Trigger: GTTTAATGGCTTTACAAAGAAAGCCAGGCAGAGGAGCACTTCTCAGTGGCTGTGGTCGGACCATGACCTAGCTGACCATGAACTTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382150.8
CDS TCA 90 bp GTCTGGACACACTTGACTGGGTTCTCTGCTGAGAATCTCACAGGCTaGAATCCAAGTATAGCTGGCTGGGCTCTTATCTGGAAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: VWTHLTGFSAENLTG*NPSIAGWALIWKFQ
Trigger: TTGGAACTTCCAGATAAGAGCCCAGCCAGCTATACTTGGATTTCAGCCTGTGAGATTCTCAGCAGAGAACCCAGTCAAGTGTGTCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509207.1
ENST00000629874.1
CDS-3UTR CAA 90 bp ATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAGCAGGAGACGACGTTTaGGCAGCTGAGCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: MLQCQAEQSMLKVVAPTLAGDDV*AAEQGK
Trigger: CTTGCCCTGCTCAGCTGCCAAAACGTCGTCTCCTGC...TAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS TCA 90 bp AAAATGCTAGAGAAGCCAGATACAGCTACAACAGTAACAGGGAGGTaGGAAAACACGGCTTCTCAGTGTGGTGACCAAGTTCTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: KMLEKPDTATTVTGR*ENTASQCGDQVLLW
Trigger: CCACAGAAGAACTTGGTCACCACACTGAGAAGCCGTGTTTTCTCACCTCCCTGTTACTGTTGTAGCTGTATCTGGCTTCTCTAGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS GCA 90 bp AGAGAGTCTCTGAGGAGAAACTTCTGTCTCAGTTTATGCACAGGCTaGCTTACAACTCCTGTGGAATTAGCTGTTAGCGCCTCAATCAGA +
Preference number: 5 (lower is better)
Translates to: RESLRRNFCLSLCTG*LTTPVELAVSASIR
Trigger: TCTGATTGAGGCGCTAACAGCTAATTCCACAGGAGTTGTAAGGCAGCCTGTGCATAAACTGAGACAGAAGTTTCTCCTCAGAGACTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS-3UTR CAA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGCAACGTCAGGCTaGGAACAAAGACTTGCAAGG +
Preference number: 5 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVVATSG*EQRLAR
Trigger: CCTTGCAAGTCTTTGTTCCAAGCCTGACGTTGCTAC...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS-3UTR CAA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGAACAATACCCACTGTTaGCAGTCCTTCGGACTCCCA +
Preference number: 5 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVNNTHC*QSFGLP
Trigger: TGGGAGTCCGAAGGACTGCAAACAGTGGGTATTGTT...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS-3UTR CAA 90 bp AAGGATCTGAAGCTCTTTCTTGGTAAATTTGCTCTGGGCTTCCAGAAGCTCAAGCCAATTGAGTTTTTCTaGTACTGTCCCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: KDLKLFLGKFALGFQKLKPIEFF*YCPPEQ
Trigger: TTGCTCCGGGGGACAGTACAAGAAAAACTCAATTGG...CTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGAGCTTCAGATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR CAA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTAGCCTCCAGACCCCTTaGGAGTGGAGGGAGTTAATT +
Preference number: 5 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTSLQTP*EWRELI
Trigger: AATTAACTCCCTCCACTCCAAAGGGGTCTGGAGGCT...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS-3UTR CAA 90 bp AACAACACCACTGGGGCATTCATTCTTAAATCCTCTGTAAAGGATCTGAAGCTCTGTCAAGGACAGCACTaGGTACACAGCGAATGCTCA +
Preference number: 5 (lower is better)
Translates to: NNTTGAFILKSSVKDLKLCQGQH*VHSECS
Trigger: TGAGCATTCGCTGTGTACCAAGTGCTGTCCTTGACA...GAGCTTCAGATCCTTTACAGAGGATTTAAGAATGAATGCCCCAGTGGTGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR CAA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGTCTTTCTTGGTAAATTaGCTCTGGGCTTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVSFLVN*LWASRS
Trigger: GCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGA...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp AAGGATCTGAAGCTCTTTCTTGGTAAATTTGCTCTGGGCTTCCAGAAGCTCAAGCTGGGAGCATCTTCTTaGAGGACAGGATATGTACAT +
Preference number: 5 (lower is better)
Translates to: KDLKLFLGKFALGFQKLKLGASS*RTGYVH
Trigger: ATGTACATATCCTGTCCTCAAAGAAGATGCTCCCAG...CTTGAGCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGAGCTTCAGATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS-3UTR CAA 90 bp CCCCGGAGCAAAATGGAAAGACCTTTGATGAAATCCTCGAAACTCACAGCTCCAAAATGTTTCAACGTGTaGTCTGGGAGCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: PRSKMERPLMKSSKLTAPKCFNV*SGSIFF
Trigger: AAAGAAGATGCTCCCAGACAACACGTTGAAACATTT...TGGAGCTGTGAGTTTCGAGGATTTCATCAAAGGTCTTTCCATTTTGCTCCGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS TCA 90 bp ATCCACTTTCATGCTCATTCTGGTTGTTGGCAGAAGCCAATTCCTTaGCATTGTAGGTCTGAGGTCACAATTGCATTGCTAGCTGTCAAA +
Preference number: 5 (lower is better)
Translates to: IHFHAHSGCWQKPIP*HCRSEVTIALLAVK
Trigger: TTTGACAGCTAGCAATGCAATTGTGACCTCAGACCTACAATGTCAAGGAATTGGCTTCTGCCAACAACCAGAATGAGCATGAAAGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509207.1
ENST00000629874.1
CDS GCA 90 bp ATAATAAAAAGAGAGTCTCTGAGGAGAAACTTCTGTCTCAGTTTATaGACAGGCTGCCTTACAACTCCTGTGGAATTAGCTGTTAGCGCC +
Preference number: 5 (lower is better)
Translates to: IIKRESLRRNFCLSL*TGCLTTPVELAVSA
Trigger: GGCGCTAACAGCTAATTCCACAGGAGTTGTAAGGCAGCCTGTGCATAAACTGAGACAGAAGTTTCTCCTCAGAGACTCTCTTTTTATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS-3UTR CAA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGAAACTCACAGCTCCATaGTGGTCTGTATCAAATGCA +
Preference number: 5 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVKLTAP*WSVSNA
Trigger: TGCATTTGATACAGACCACAATGGAGCTGTGAGTTT...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGACCAATTGAGTTTTTCTaGTACTGTCCCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGPIEFF*YCPPEQ
Trigger: TTGCTCCGGGGGACAGTACAAGAAAAACTCAATTGG...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp ATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTACCAATTGAGTTTTTCTaGTACTGTCCCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: MLQCQAEQSMLKVVAPTLPIEFF*YCPPEQ
Trigger: TTGCTCCGGGGGACAGTACAAGAAAAACTCAATTGG...TAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACCCAATTGAGTTTTTCTaGTACTGTCCCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHPIEFF*YCPPEQ
Trigger: TTGCTCCGGGGGACAGTACAAGAAAAACTCAATTGG...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTATCTTCCACGCTGTTTaGAATAGCAGGAGACGACGT +
Preference number: 5 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTIFHAV*NSRRRR
Trigger: ACGTCGTCTCCTGCTATTCAAAACAGCGTGGAAGAT...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGACGTCTGGACACACTaGACTGGGTTCTCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKDVWTH*TGFSAE
Trigger: CTCAGCAGAGAACCCAGTCAAGTGTGTCCAGACGTC...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS TCA 90 bp GTTCATCTTCCACGCTGTCTGTATGAAGAGAACCTGTTAATAGTCTaGGAAGGTACTGGGCAAATTTCAGTATTTCACGTTTACACCGCT +
Preference number: 5 (lower is better)
Translates to: VHLPRCLYEENLLIV*EGTGQISVFHVYTA
Trigger: AGCGGTGTAAACGTGAAATACTGAAATTTGCCCAGTACCTTCTCAGACTATTAACAGGTTCTCTTCATACAGACAGCGTGGAAGATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS-3UTR CAA 90 bp TTGCTTGCTAATTTTGCTTGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGTCTTTCTTGGTAAATTaGCTCTGGGCTTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LLANFACCLFLVDSGVVKSFLVN*LWASRS
Trigger: GCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGA...CTTGACTACCCCACTGTCTACTAAGAACAAACAGCAAGCAAAATTAGCAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp TTTGTGATATTTCTACAAAACAGGGACGATGTGTGTGGCTTTAGTAATGTGGCACCAATTGAGTTTTTCTaGTACTGTCCCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: FVIFLQNRDDVCGFSNVAPIEFF*YCPPEQ
Trigger: TTGCTCCGGGGGACAGTACAAGAAAAACTCAATTGG...TGCCACATTACTAAAGCCACACACATCGTCCCTGTTTTGTAGAAATATCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACCTGGGAGCATCTTCTTaGAGGACAGGATATGTACAT +
Preference number: 5 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHLGASS*RTGYVH
Trigger: ATGTACATATCCTGTCCTCAAAGAAGATGCTCCCAG...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp ATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTACTGGGAGCATCTTCTTaGAGGACAGGATATGTACAT +
Preference number: 5 (lower is better)
Translates to: MLQCQAEQSMLKVVAPTLLGASS*RTGYVH
Trigger: ATGTACATATCCTGTCCTCAAAGAAGATGCTCCCAG...TAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp CAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGAGATATCCTGACCCTTaGCATATGTCTGTAAACATC +
Preference number: 5 (lower is better)
Translates to: QCQAEQSMLKVVAPTLRVRYPDP*HMSVNI
Trigger: GATGTTTACAGACATATGCAAAGGGTCAGGATATCT...CACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS GCA 90 bp GAAACTCTTTGTTTAATGGGCAATCACAGTATGCCAGCATGGGTGTaGCACAGAGAATCAAAGTCCACAGATACTGATTATATTCCTATC +
Preference number: 5 (lower is better)
Translates to: ETLCLMGNHSMPAWV*HRESKSTDTDYIPI
Trigger: GATAGGAATATAATCAGTATCTGTGGACTTTGATTCTCTGTGGCACACCCATGCTGGCATACTGTGATTGCCCATTAAACAAAGAGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515373.1
CDS-3UTR CAA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTTCTTTCTTGGTAAATTaGCTCTGGGCTTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVASFLVN*LWASRS
Trigger: GCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGA...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp GCAATCTATGCTAAAAGTGGTAGCTCCAACTTTAAGGGTGGTAGAATAGTTCACAAACTCACAGCTCCATaGTGGTCTGTATCAAATGCA +
Preference number: 5 (lower is better)
Translates to: AIYAKSGSSNFKGGRIVHKLTAP*WSVSNA
Trigger: TGCATTTGATACAGACCACAATGGAGCTGTGAGTTT...GTGAACTATTCTACCACCCTTAAAGTTGGAGCTACCACTTTTAGCATAGATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp TACTATATACTGGAGGATAGATATCCTGACCCTTTGCATATGTCTGTAAACATCCCAATTGAGTTTTTCTaGTACTGTCCCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: YYILEDRYPDPLHMSVNIPIEFF*YCPPEQ
Trigger: TTGCTCCGGGGGACAGTACAAGAAAAACTCAATTGG...GATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp AGGAAGTCAGGGGAAAGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTTCCTTCTGTAGCCTCTaGGTCTTTGTGATATTTCTA +
Preference number: 5 (lower is better)
Translates to: RKSGERGQIWPLMLLGLLSFCSL*VFVIFL
Trigger: TAGAAATATCACAAAGACCAAGAGGCTACAGAAGGA...AAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCCCCTGACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS CCA 90 bp TTCTCAGAAACTCTTTGTTTAATGGGCAATCACAGTATGCCAGCATaGGTGTGCCACAGAGAATCAAAGTCCACAGATACTGATTATATT +
Preference number: 5 (lower is better)
Translates to: FSETLCLMGNHSMPA*VCHRESKSTDTDYI
Trigger: AATATAATCAGTATCTGTGGACTTTGATTCTCTGTGGCACACCCATGCTGGCATACTGTGATTGCCCATTAAACAAAGAGTTTCTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515373.1
CDS-3UTR CAA 90 bp CCTTTGCATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCTCTTTCTTGGTAAATTaGCTCTGGGCTTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: PLHMSVNILVLFDAFFNFSFLVN*LWASRS
Trigger: GCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGA...GAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp TTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTAAACTCACAGCTCCATaGTGGTCTGTATCAAATGCA +
Preference number: 5 (lower is better)
Translates to: LHNMLQCQAEQSMLKVVAKLTAP*WSVSNA
Trigger: TGCATTTGATACAGACCACAATGGAGCTGTGAGTTT...AGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAACCAATTGAGTTTTTCTaGTACTGTCCCCCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKPIEFF*YCPPEQ
Trigger: TTGCTCCGGGGGACAGTACAAGAAAAACTCAATTGG...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp CCTTTGCATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCTGGGAGCATCTTCTTaGAGGACAGGATATGTACAT +
Preference number: 5 (lower is better)
Translates to: PLHMSVNILVLFDAFFNFLGASS*RTGYVH
Trigger: ATGTACATATCCTGTCCTCAAAGAAGATGCTCCCAG...GAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGAAAATGTTTCAACGTGTaGTCTGGGAGCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGKCFNV*SGSIFF
Trigger: AAAGAAGATGCTCCCAGACAACACGTTGAAACATTT...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGAACATCCTTGTTTTGTTaGATGCCTTCTTCAACTTCC +
Preference number: 5 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGTSLFC*MPSSTS
Trigger: GGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGT...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp TGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGGTTTCTTTCTTTGTCCCTGTAAACATCCTTGTTTaGTTTGATGCCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: CCLFLVDSGVVKVSFFVPVNILV*FDAFFN
Trigger: GTTGAAGAAGGCATCAAACAAAACAAGGATGTTTAC...AGGGACAAAGAAAGAAACCTTGACTACCCCACTGTCTACTAAGAACAAACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGAAATTTTGCTTGCTGTTaGTTCTTAGTAGACAGTGGG +
Preference number: 5 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGNFACC*FLVDSG
Trigger: CCCACTGTCTACTAAGAACAAACAGCAAGCAAAATT...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp AATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTGGTAGCTCCAACTAATTTTGCTTGCTGTTaGTTCTTAGTAGACAGTGGG +
Preference number: 5 (lower is better)
Translates to: NMLQCQAEQSMLKVVAPTNFACC*FLVDSG
Trigger: CCCACTGTCTACTAAGAACAAACAGCAAGCAAAATT...AGTTGGAGCTACCACTTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGATTGTTGCAAAGACAGTaGCAAATTTCCTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGLLQRQ*QISSFC
Trigger: ACAGAAGGAGGAAATTTGCAACTGTCTTTGCAACAA...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAATGCTCATTCTGGTTGTaGGCAGAAGCCAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKCSFWL*AEANSL
Trigger: CAAGGAATTGGCTTCTGCCAACAACCAGAATGAGCA...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509207.1
CDS TCA 90 bp CACAAATTGTTGGCTTGCTTCCCAATATCACTGTTCAATCAACAGTaGTTGAAGAATCACTGTTCTTCAATGCCTGAAGCTCAATGTCTA +
Preference number: 5 (lower is better)
Translates to: HKLLACFPISLFNQQ*LKNHCSSMPEAQCL
Trigger: TAGACATTGAGCTTCAGGCATTGAAGAACAGTGATTCTTCAATCACTGTTGATTGAACAGTGATATTGGGAAGCAAGCCAACAATTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512102.1
ENST00000630138.1
CDS TCA 90 bp TATGCCAGCATGGGTGTGCCACAGAGAATCAAAGTCCACAGATACTaGTTATATTCCTATCTGGGAAGGATCAGTATGAAATATACATAT +
Preference number: 5 (lower is better)
Translates to: YASMGVPQRIKVHRY*LYSYLGRISMKYTY
Trigger: ATATGTATATTTCATACTGATCCTTCCCAGATAGGAATATAATCAGTATCTGTGGACTTTGATTCTCTGTGGCACACCCATGCTGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515373.1
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAATCTTTCTTGGTAAATTaGCTCTGGGCTTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKSFLVN*LWASRS
Trigger: GCTTCTGGAAGCCCAGAGCAAATTTACCAAGAAAGA...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp CCTTTGCATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCAAACTCACAGCTCCATaGTGGTCTGTATCAAATGCA +
Preference number: 5 (lower is better)
Translates to: PLHMSVNILVLFDAFFNFKLTAP*WSVSNA
Trigger: TGCATTTGATACAGACCACAATGGAGCTGTGAGTTT...GAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp CTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTATATCTGGGAGCATCTTCTTaGAGGACAGGATATGTACAT +
Preference number: 5 (lower is better)
Translates to: LICESLNNPMAKEPIKLYLGASS*RTGYVH
Trigger: ATGTACATATCCTGTCCTCAAAGAAGATGCTCCCAG...ATATAGTTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTGGGAGCATCTTCTTaGAGGACAGGATATGTACAT +
Preference number: 5 (lower is better)
Translates to: KSLICESLNNPMAKEPIKLGASS*RTGYVH
Trigger: ATGTACATATCCTGTCCTCAAAGAAGATGCTCCCAG...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAACTGGGAGCATCTTCTTaGAGGACAGGATATGTACAT +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKLGASS*RTGYVH
Trigger: ATGTACATATCCTGTCCTCAAAGAAGATGCTCCCAG...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp TTTGTGATATTTCTACAAAACAGGGACGATGTGTGTGGCTTTAGTAATGTGGCAACATCCTTGTTTTGTTaGATGCCTTCTTCAACTTCC +
Preference number: 5 (lower is better)
Translates to: FVIFLQNRDDVCGFSNVATSLFC*MPSSTS
Trigger: GGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGT...TGCCACATTACTAAAGCCACACACATCGTCCCTGTTTTGTAGAAATATCACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp AGCTCCAACTTTAAGGGTGGTAGAATAGTTCACATTTGTCTGTTGGATTCAGGAGTAAACATCCTTGTTTaGTTTGATGCCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: SSNFKGGRIVHICLLDSGVNILV*FDAFFN
Trigger: GTTGAAGAAGGCATCAAACAAAACAAGGATGTTTAC...TCCTGAATCCAACAGACAAATGTGAACTATTCTACCACCCTTAAAGTTGGAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGGAAAGAGGACAGATTaGGCCTTTAATGCTGTTAGG +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKGKRTD*AFNAVR
Trigger: CCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCC...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp AGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACGGAAAGAGGACAGATTaGGCCTTTAATGCTGTTAGG +
Preference number: 5 (lower is better)
Translates to: RGQIWPLMLLGLLVIKHYGKRTD*AFNAVR
Trigger: CCTAACAGCATTAAAGGCCAAATCTGTCCTCTTTCC...GTAATGCTTAATAACAAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp TTTGTGATATTTCTACAAAACAGGGACGATGTGTGTGGCTTTAGTAATGTGGCATTGTTGCAAAGACAGTaGCAAATTTCCTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: FVIFLQNRDDVCGFSNVALLQRQ*QISSFC
Trigger: ACAGAAGGAGGAAATTTGCAACTGTCTTTGCAACAA...TGCCACATTACTAAAGCCACACACATCGTCCCTGTTTTGTAGAAATATCACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp TTGCTTGCTAATTTTGCTTGCTGTTTGTTCTTAGTAGACAGTGGGGTAGTCAAGTACAAAATGTGCACATaGAGTTTACACAAACACGTG +
Preference number: 5 (lower is better)
Translates to: LLANFACCLFLVDSGVVKYKMCT*SLHKHV
Trigger: CACGTGTTTGTGTAAACTCAATGTGCACATTTTGTA...CTTGACTACCCCACTGTCTACTAAGAACAAACAGCAAGCAAAATTAGCAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS TCA 90 bp CACCGCTTTCTACAGCCACTCATCTTAAGCAACAAGGTATTCCTCTaGGGAGAGCCAGAAGTCTTTGCCAATAATAATAATAATAATAAT +
Preference number: 5 (lower is better)
Translates to: HRFLQPLILSNKVFL*GEPEVFANNNNNNN
Trigger: ATTATTATTATTATTATTATTGGCAAAGACTTCTGGCTCTCCTCAGAGGAATACCTTGTTGCTTAAGATGAGTGGCTGTAGAAAGCGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS TCA 90 bp ATGATGTGTGACTCATTAATAACAATTGGTTTGGAAAACTCTCCCTaGAGCACAAATTGTTGGCTTGCTTCCCAATATCACTGTTCAATC +
Preference number: 5 (lower is better)
Translates to: MMCDSLITIGLENSP*STNCWLASQYHCSI
Trigger: GATTGAACAGTGATATTGGGAAGCAAGCCAACAATTTGTGCTTCAGGGAGAGTTTTCCAAACCAATTGTTATTAATGAGTCACACATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512102.1
ENST00000630138.1
CDS-3UTR CAA 90 bp AGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACAAACTCACAGCTCCATaGTGGTCTGTATCAAATGCA +
Preference number: 5 (lower is better)
Translates to: RGQIWPLMLLGLLVIKHYKLTAP*WSVSNA
Trigger: TGCATTTGATACAGACCACAATGGAGCTGTGAGTTT...GTAATGCTTAATAACAAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp CTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTATATAAACTCACAGCTCCATaGTGGTCTGTATCAAATGCA +
Preference number: 5 (lower is better)
Translates to: LICESLNNPMAKEPIKLYKLTAP*WSVSNA
Trigger: TGCATTTGATACAGACCACAATGGAGCTGTGAGTTT...ATATAGTTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp TTTCAGTGTACATGTATTGTACTACTCTTAATTTCTACACTGGTGATAGCAGGGAAATGTTTCAACGTGTaGTCTGGGAGCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: FQCTCIVLLLISTLVIAGKCFNV*SGSIFF
Trigger: AAAGAAGATGCTCCCAGACAACACGTTGAAACATTT...CCCTGCTATCACCAGTGTAGAAATTAAGAGTAGTACAATACATGTACACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp CCTTTGCATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCAAATGTTTCAACGTGTaGTCTGGGAGCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: PLHMSVNILVLFDAFFNFKCFNV*SGSIFF
Trigger: AAAGAAGATGCTCCCAGACAACACGTTGAAACATTT...GAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATGCAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp TTTCAGTGTACATGTATTGTACTACTCTTAATTTCTACACTGGTGATAGCAGGGACATCCTTGTTTTGTTaGATGCCTTCTTCAACTTCC +
Preference number: 5 (lower is better)
Translates to: FQCTCIVLLLISTLVIAGTSLFC*MPSSTS
Trigger: GGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGT...CCCTGCTATCACCAGTGTAGAAATTAAGAGTAGTACAATACATGTACACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp GTTAGACCATCCCCTGAACTCAGTGGCATTATGAAAAGGATGCAAATTTATAACGTAAACATCCTTGTTTaGTTTGATGCCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: VRPSPELSGIMKRMQIYNVNILV*FDAFFN
Trigger: GTTGAAGAAGGCATCAAACAAAACAAGGATGTTTAC...GTTATAAATTTGCATCCTTTTCATAATGCCACTGAGTTCAGGGGATGGTCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp TTTCAGTGTACATGTATTGTACTACTCTTAATTTCTACACTGGTGATAGCAGGGAGATATCCTGACCCTTaGCATATGTCTGTAAACATC +
Preference number: 5 (lower is better)
Translates to: FQCTCIVLLLISTLVIAGRYPDP*HMSVNI
Trigger: GATGTTTACAGACATATGCAAAGGGTCAGGATATCT...CCCTGCTATCACCAGTGTAGAAATTAAGAGTAGTACAATACATGTACACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp TACTATATACTGGAGGATAGATATCCTGACCCTTTGCATATGTCTGTAAACATCTCCTTCTGTAGCCTCTaGGTCTTTGTGATATTTCTA +
Preference number: 5 (lower is better)
Translates to: YYILEDRYPDPLHMSVNISFCSL*VFVIFL
Trigger: TAGAAATATCACAAAGACCAAGAGGCTACAGAAGGA...GATGTTTACAGACATATGCAAAGGGTCAGGATATCTATCCTCCAGTATATAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp TTTGTGATATTTCTACAAAACAGGGACGATGTGTGTGGCTTTAGTAATGTGGCATACAAAATGTGCACATaGAGTTTACACAAACACGTG +
Preference number: 5 (lower is better)
Translates to: FVIFLQNRDDVCGFSNVAYKMCT*SLHKHV
Trigger: CACGTGTTTGTGTAAACTCAATGTGCACATTTTGTA...TGCCACATTACTAAAGCCACACACATCGTCCCTGTTTTGTAGAAATATCACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp CTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAACTATATAAATGTTTCAACGTGTaGTCTGGGAGCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LICESLNNPMAKEPIKLYKCFNV*SGSIFF
Trigger: AAAGAAGATGCTCCCAGACAACACGTTGAAACATTT...ATATAGTTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp AGAGGACAGATTTGGCCTTTAATGCTGTTAGGATTACTTGTTATTAAGCATTACAAATGTTTCAACGTGTaGTCTGGGAGCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RGQIWPLMLLGLLVIKHYKCFNV*SGSIFF
Trigger: AAAGAAGATGCTCCCAGACAACACGTTGAAACATTT...GTAATGCTTAATAACAAGTAATCCTAACAGCATTAAAGGCCAAATCTGTCCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAAAATGTTTCAACGTGTaGTCTGGGAGCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKKCFNV*SGSIFF
Trigger: AAAGAAGATGCTCCCAGACAACACGTTGAAACATTT...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382149.9
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
ENST00000509207.1
CDS-3UTR CAA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAAACATCCTTGTTTTGTTaGATGCCTTCTTCAACTTCC +
Preference number: 5 (lower is better)
Translates to: KSLICESLNNPMAKEPIKTSLFC*MPSSTS
Trigger: GGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGT...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAACATCCTTGTTTTGTTaGATGCCTTCTTCAACTTCC +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKTSLFC*MPSSTS
Trigger: GGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGT...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAAAGATATCCTGACCCTTaGCATATGTCTGTAAACATC +
Preference number: 5 (lower is better)
Translates to: KSLICESLNNPMAKEPIKRYPDP*HMSVNI
Trigger: GATGTTTACAGACATATGCAAAGGGTCAGGATATCT...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAAGATATCCTGACCCTTaGCATATGTCTGTAAACATC +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKRYPDP*HMSVNI
Trigger: GATGTTTACAGACATATGCAAAGGGTCAGGATATCT...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTAAGATATCCTGACCCTTaGCATATGTCTGTAAACATC +
Preference number: 5 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLRYPDP*HMSVNI
Trigger: GATGTTTACAGACATATGCAAAGGGTCAGGATATCT...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAAATTTTGCTTGCTGTTaGTTCTTAGTAGACAGTGGG +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKNFACC*FLVDSG
Trigger: CCCACTGTCTACTAAGAACAAACAGCAAGCAAAATT...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp CATATGTCTGTAAACATCCTTGTTTTGTTTGATGCCTTCTTCAACTTCCACTTATCCTTCTGTAGCCTCTaGGTCTTTGTGATATTTCTA +
Preference number: 5 (lower is better)
Translates to: HMSVNILVLFDAFFNFHLSFCSL*VFVIFL
Trigger: TAGAAATATCACAAAGACCAAGAGGCTACAGAAGGA...TAAGTGGAAGTTGAAGAAGGCATCAAACAAAACAAGGATGTTTACAGACATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAATTGTTGCAAAGACAGTaGCAAATTTCCTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKLLQRQ*QISSFC
Trigger: ACAGAAGGAGGAAATTTGCAACTGTCTTTGCAACAA...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS-3UTR CAA 90 bp AAAGCTTGTTTGCATAATATGCTTCAGTGTCAAGCTGAGCAATCTATGCTAAAAGTAAACATCCTTGTTTaGTTTGATGCCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: KACLHNMLQCQAEQSMLKVNILV*FDAFFN
Trigger: GTTGAAGAAGGCATCAAACAAAACAAGGATGTTTAC...TTTTAGCATAGATTGCTCAGCTTGACACTGAAGCATATTATGCAAACAAGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382150.8
ENST00000382152.7
ENST00000447367.6
CDS-3UTR CAA 90 bp AAATCACTGATATGTGAAAGCCTCAATAATCCCATGGCTAAGGAACCAATAAAATACAAAATGTGCACATaGAGTTTACACAAACACGTG +
Preference number: 5 (lower is better)
Translates to: KSLICESLNNPMAKEPIKYKMCT*SLHKHV
Trigger: CACGTGTTTGTGTAAACTCAATGTGCACATTTTGTA...TTTTATTGGTTCCTTAGCCATGGGATTATTGAGGCTTTCACATATCAGTGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359001.9
ENST00000382148.7
ENST00000382152.7
CDS GCA 72 bp GAGAGTCCACCGGCCAGGGGCGTCTGTCCACGGGTCTaGACGGGAGCGCACCGCCGCTCGGCCCGGGGGCGT +
Preference number: 6 (lower is better)
Translates to: ESPPARGVCPRV*TGAHRRSARGR
Trigger: ACGCCCCCGGGCCGAGCGGCGGTGCGCTCCCGTGCAGACCCGTGGACAGACGCCCCTGGCCGGTGGACTCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382152.7
ENST00000447367.6
CDS GCA 72 bp TCCACCCTCCTCACATTCATGTCTAGGGACGCAGGGTaGAGAAGCGAGACTCGAGAGTCCACCGGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: STLLTFMSRDAG*RSETRESTGQG
Trigger: CCCCTGGCCGGTGGACTCTCGAGTCTCGCTTCTGCACCCTGCGTCCCTAGACATGAATGTGAGGAGGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382152.7
ENST00000447367.6
CDS TCA 72 bp AGTCCTTCGGACTCCCACTCCAGAGTCAACATCCTCTaGGCTGGCAGAGCATCCCAGCCTCCAGACCCCTTT +
Preference number: 6 (lower is better)
Translates to: SPSDSHSRVNIL*AGRASQPPDPF
Trigger: AAAGGGGTCTGGAGGCTGGGATGCTCTGCCAGCTCAGAGGATGTTGACTCTGGAGTGGGAGTCCGAAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS CCA 72 bp TTCGGACTCCCACTCCAGAGTCAACATCCTCTGAGCTaGCAGAGCATCCCAGCCTCCAGACCCCTTTGGAGT +
Preference number: 6 (lower is better)
Translates to: FGLPLQSQHPLS*QSIPASRPLWS
Trigger: ACTCCAAAGGGGTCTGGAGGCTGGGATGCTCTGCCAGCTCAGAGGATGTTGACTCTGGAGTGGGAGTCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382149.9
CDS TCA 72 bp ATGAGCCGCTCTTTAATGCTGCGCTTGGTGCTGTTCTaGGCGTACAGGAAACCGCCTGTAGAGCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: MSRSLMLRLVLF*AYRKPPVELAS
Trigger: GGAGGCCAGCTCTACAGGCGGTTTCCTGTACGCTCAGAACAGCACCAAGCGCAGCATTAAAGAGCGGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS TCA 72 bp AACAGGGAGGTGAGAAAACACGGCTTCTCAGTGTGGTaGCCAAGTTCTTCTGTGGCAACAGACAGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: NREVRKHGFSVW*PSSSVATDRLP
Trigger: CGGCAGCCTGTCTGTTGCCACAGAAGAACTTGGTCACCACACTGAGAAGCCGTGTTTTCTCACCTCCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS TCA 72 bp CAGGTGGGAGGTAAATCTGGTTCCTTGATGATGATCTaGCAGGTGCTCCCACTTCCGAAGTCTCCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: QVGGKSGSLMMI*QVLPLPKSPSG
Trigger: CCCAGAGGGAGACTTCGGAAGTGGGAGCACCTGTCAGATCATCATCAAGGAACCAGATTTACCTCCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512102.1
CDS GCA 72 bp ATTGCATTGCTAGCTGTCAAACCGGGTGCTGCTCTCTaGAACCAGAGGCTGCCCTGCATTCCTTCTCACACA +
Preference number: 6 (lower is better)
Translates to: IALLAVKPGAAL*NQRLPCIPSHT
Trigger: TGTGTGAGAAGGAATGCAGGGCAGCCTCTGGTTGCAGAGAGCAGCACCCGGTTTGACAGCTAGCAATGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509207.1
ENST00000629874.1
CDS CAA 90 bp CCCTCTGGGACCACTGGGTGTAAGTCTTCTTGTCAAGGACAGCACTaGGTACACAGCGAATGCTCAATAACCGCTTCGCCTGTAGAGCTG +
Preference number: 6 (lower is better)
Translates to: PSGTTGCKSSCQGQH*VHSECSITASPVEL
Trigger: CAGCTCTACAGGCGAAGCGGTTATTGAGCATTCGCTGTGTACCAAGTGCTGTCCTTGACAAGAAGACTTACACCCAGTGGTCCCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS TCA 72 bp TCATGGTCAGCTAGGTCATGGTCCGACCACAGCCACTaGGAAGTGCTCCTCTGCCTGGCTTTCTTTGTAAAG +
Preference number: 6 (lower is better)
Translates to: SWSARSWSDHSH*EVLLCLAFFVK
Trigger: CTTTACAAAGAAAGCCAGGCAGAGGAGCACTTCTCAGTGGCTGTGGTCGGACCATGACCTAGCTGACCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382150.8
CDS GCA 72 bp TGTGGTGACCAAGTTCTTCTGTGGCAACAGACAGGCTaGCGGTTCACACTTGTAGTAACCCAGCTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: CGDQVLLWQQTG*RFTLVVTQLWF
Trigger: GAACCAGAGCTGGGTTACTACAAGTGTGAACCGGCAGCCTGTCTGTTGCCACAGAAGAACTTGGTCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS GCA 72 bp TCTTCTTGTCAAGGACAGCACTTGGTACACAGCGAATaGTCAATAACCGCTTCGCCTGTAGAGCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SSCQGQHLVHSE*SITASPVELAS
Trigger: GGAGGCCAGCTCTACAGGCGAAGCGGTTATTGAGCATTCGCTGTGTACCAAGTGCTGTCCTTGACAAGAAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS CAA 90 bp CCCTCTGGGACCACTGGGTGTAAGTCTTCTTGTCAAGGACAGCACTaGGTACACAGCGAATGCTCAATAACCGCTTCTGTTCTATCCCCT +
Preference number: 6 (lower is better)
Translates to: PSGTTGCKSSCQGQH*VHSECSITASVLSP
Trigger: AGGGGATAGAACAGAAGCGGTTATTGAGCATTCGCTGTGTACCAAGTGCTGTCCTTGACAAGAAGACTTACACCCAGTGGTCCCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512102.1
CDS CCA 72 bp AACACGGCTTCTCAGTGTGGTGACCAAGTTCTTCTGTaGCAACAGACAGGCTGCCGGTTCACACTTGTAGTA +
Preference number: 6 (lower is better)
Translates to: NTASQCGDQVLL*QQTGCRFTLVV
Trigger: TACTACAAGTGTGAACCGGCAGCCTGTCTGTTGCCACAGAAGAACTTGGTCACCACACTGAGAAGCCGTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS TCA 72 bp GCTGTTTTGAATAGCAGGAGACGACGTTTTGGCAGCTaGGCAGGGCAAGAGCTTCATGAGCCGCTCTTTAAT +
Preference number: 6 (lower is better)
Translates to: AVLNSRRRRFGS*AGQELHEPLFN
Trigger: ATTAAAGAGCGGCTCATGAAGCTCTTGCCCTGCTCAGCTGCCAAAACGTCGTCTCCTGCTATTCAAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382152.7
CDS TCA 72 bp GTTGCTTTGAATAGCAGGAGACGACGTTTTGGCAGCTaGGCAGGGCAAGAGCTTCATGAGCCGCTCTTTAAT +
Preference number: 6 (lower is better)
Translates to: VALNSRRRRFGS*AGQELHEPLFN
Trigger: ATTAAAGAGCGGCTCATGAAGCTCTTGCCCTGCTCAGCTGCCAAAACGTCGTCTCCTGCTATTCAAAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515373.1
CDS TCA 72 bp GTTGGACGTCTGGACACACTTGACTGGGTTCTCTGCTaGGAATCTCACAGGCTGAAATCCAAGTATAGCTGG +
Preference number: 6 (lower is better)
Translates to: VGRLDTLDWVLC*ESHRLKSKYSW
Trigger: CCAGCTATACTTGGATTTCAGCCTGTGAGATTCTCAGCAGAGAACCCAGTCAAGTGTGTCCAGACGTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509207.1
ENST00000629874.1
CDS CAA 72 bp ACCACTGGGTGTAAGTCTTCTTGTCAAGGACAGCACTaGGTACACAGCGAATGCTCAATAACCGCTTCGCCT +
Preference number: 6 (lower is better)
Translates to: TTGCKSSCQGQH*VHSECSITASP
Trigger: AGGCGAAGCGGTTATTGAGCATTCGCTGTGTACCAAGTGCTGTCCTTGACAAGAAGACTTACACCCAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515786.2
CDS TCA 72 bp GAGAAGCCAGATACAGCTACAACAGTAACAGGGAGGTaGGAAAACACGGCTTCTCAGTGTGGTGACCAAGTT +
Preference number: 6 (lower is better)
Translates to: EKPDTATTVTGR*ENTASQCGDQV
Trigger: AACTTGGTCACCACACTGAGAAGCCGTGTTTTCTCACCTCCCTGTTACTGTTGTAGCTGTATCTGGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS GCA 72 bp CTGAGGAGAAACTTCTGTCTCAGTTTATGCACAGGCTaGCTTACAACTCCTGTGGAATTAGCTGTTAGCGCC +
Preference number: 6 (lower is better)
Translates to: LRRNFCLSLCTG*LTTPVELAVSA
Trigger: GGCGCTAACAGCTAATTCCACAGGAGTTGTAAGGCAGCCTGTGCATAAACTGAGACAGAAGTTTCTCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS GCA 72 bp TCTTCTTGTCAAGGACAGCACTTGGTACACAGCGAATaGTCAATAACCGCTTCTGTTCTATCCCCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: SSCQGQHLVHSE*SITASVLSPGS
Trigger: ACTTCCAGGGGATAGAACAGAAGCGGTTATTGAGCATTCGCTGTGTACCAAGTGCTGTCCTTGACAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512102.1
CDS CAA 72 bp ACCACTGGGTGTAAGTCTTCTTGTCAAGGACAGCACTaGGTACACAGCGAATGCTCAATAACCGCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: TTGCKSSCQGQH*VHSECSITASV
Trigger: AACAGAAGCGGTTATTGAGCATTCGCTGTGTACCAAGTGCTGTCCTTGACAAGAAGACTTACACCCAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512102.1
CDS GCA 72 bp TGGAGGAAAACAAGAAAGAGTCTTAGGACCAGCCACTaGTCACCGATGCTTACACAGAGCAACAAAGGAAAA +
Preference number: 6 (lower is better)
Translates to: WRKTRKSLRTSH*SPMLTQSNKGK
Trigger: TTTTCCTTTGTTGCTCTGTGTAAGCATCGGTGAGCAGTGGCTGGTCCTAAGACTCTTTCTTGTTTTCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359001.9
CDS GCA 72 bp AGAGAGTCTCTGAGGAGAAACTTCTGTCTCAGTTTATaGACAGGCTGCCTTACAACTCCTGTGGAATTAGCT +
Preference number: 6 (lower is better)
Translates to: RESLRRNFCLSL*TGCLTTPVELA
Trigger: AGCTAATTCCACAGGAGTTGTAAGGCAGCCTGTGCATAAACTGAGACAGAAGTTTCTCCTCAGAGACTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382148.7
ENST00000629040.1
CDS TCA 72 bp CATGCTCATTCTGGTTGTTGGCAGAAGCCAATTCCTTaGCATTGTAGGTCTGAGGTCACAATTGCATTGCTA +
Preference number: 6 (lower is better)
Translates to: HAHSGCWQKPIP*HCRSEVTIALL
Trigger: TAGCAATGCAATTGTGACCTCAGACCTACAATGTCAAGGAATTGGCTTCTGCCAACAACCAGAATGAGCATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509207.1
ENST00000629874.1
CDS CCA 72 bp ACTCTTTGTTTAATGGGCAATCACAGTATGCCAGCATaGGTGTGCCACAGAGAATCAAAGTCCACAGATACT +
Preference number: 6 (lower is better)
Translates to: TLCLMGNHSMPA*VCHRESKSTDT
Trigger: AGTATCTGTGGACTTTGATTCTCTGTGGCACACCCATGCTGGCATACTGTGATTGCCCATTAAACAAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515373.1
CDS GCA 72 bp TGTTTAATGGGCAATCACAGTATGCCAGCATGGGTGTaGCACAGAGAATCAAAGTCCACAGATACTGATTAT +
Preference number: 6 (lower is better)
Translates to: CLMGNHSMPAWV*HRESKSTDTDY
Trigger: ATAATCAGTATCTGTGGACTTTGATTCTCTGTGGCACACCCATGCTGGCATACTGTGATTGCCCATTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515373.1
CDS TCA 72 bp CCACGCTGTCTGTATGAAGAGAACCTGTTAATAGTCTaGGAAGGTACTGGGCAAATTTCAGTATTTCACGTT +
Preference number: 6 (lower is better)
Translates to: PRCLYEENLLIV*EGTGQISVFHV
Trigger: AACGTGAAATACTGAAATTTGCCCAGTACCTTCTCAGACTATTAACAGGTTCTCTTCATACAGACAGCGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382148.7
CDS TCA 72 bp CTTGCTTCCCAATATCACTGTTCAATCAACAGTGATTaGAGAATCACTGTTCTTCAATGCCTGAAGCTCAAT +
Preference number: 6 (lower is better)
Translates to: LASQYHCSINSD*RITVLQCLKLN
Trigger: ATTGAGCTTCAGGCATTGAAGAACAGTGATTCTTCAATCACTGTTGATTGAACAGTGATATTGGGAAGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512102.1
ENST00000630138.1