RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNIP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000115041

Ensembl transcript IDs: ENST00000295225.10, ENST00000360990.7, ENST00000377181.2, ENST00000461336.5, ENST00000468529.1, ENST00000475491.1, ENST00000486055.1

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGATGCCCTCCTGGAGGCAGAGGCCCCCAGTCAGCCTGGAGCCTaGAGCCAGGCGTCCATGCAGCTCCGCAGGGGAGGCCAGGCTGTG +
Preference number: 1 (lower is better)
Translates to: ADALLEAEAPSQPGA*SQASMQLRRGGQAV
Trigger: CACAGCCTGGCCTCCCCTGCGGAGCTGCATGGACGCCTGGCTCCAGGCTCCAGGCTGACTGGGGGCCTCTGCCTCCAGGAGGGCATCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 90 bp GACATGCGGCCGGTCTGTGTCCCAGCGTGGGAGGCAGACCCCTCCTaGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGGCCAAGGCCGGCA +
Preference number: 1 (lower is better)
Translates to: DMRPVCVPAWEADPS*LGCAASLAPRPRPA
Trigger: TGCCGGCCTTGGCCTTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGACACAGACCGGCCGCATGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR GCA 90 bp CCCTCCCAGGCCGTGGCCAAGGGAGACGCTTCTGCCATGCAGACATaGGGCCGGTCTGTGTCCCAGCGTGGGAGGCAGACCCCTCCTGGT +
Preference number: 1 (lower is better)
Translates to: PSQAVAKGDASAMQT*GRSVSQRGRQTPPG
Trigger: ACCAGGAGGGGTCTGCCTCCCACGCTGGGACACAGACCGGCCGCATGTCTGCATGGCAGAAGCGTCTCCCTTGGCCACGGCCTGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR TCA 90 bp TGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTaGGGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: CSWRGHAAWDRVPSG*GPNQAGAASLSSWG
Trigger: CCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR GCA 90 bp AGGAACCACCCTCCCAGGCCGTGGCCAAGGGAGACGCTTCTGCCATaGAGACATGCGGCCGGTCTGTGTCCCAGCGTGGGAGGCAGACCC +
Preference number: 1 (lower is better)
Translates to: RNHPPRPWPRETLLP*RHAAGLCPSVGGRP
Trigger: GGGTCTGCCTCCCACGCTGGGACACAGACCGGCCGCATGTCTGCATGGCAGAAGCGTCTCCCTTGGCCACGGCCTGGGAGGGTGGTTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 90 bp AGACGCTTCTGCCATGCAGACATGCGGCCGGTCTGTGTCCCAGCGTaGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCC +
Preference number: 1 (lower is better)
Translates to: RRFCHADMRPVCVPA*EADPSWLGCAASLA
Trigger: GGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGACACAGACCGGCCGCATGTCTGCATGGCAGAAGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR GCA 90 bp AGAACAGGAACCACCCTCCCAGGCCGTGGCCAAGGGAGACGCTTCTaGCATGCAGACATGCGGCCGGTCTGTGTCCCAGCGTGGGAGGCA +
Preference number: 1 (lower is better)
Translates to: RTGTTLPGRGQGRRF*HADMRPVCVPAWEA
Trigger: TGCCTCCCACGCTGGGACACAGACCGGCCGCATGTCTGCATGGCAGAAGCGTCTCCCTTGGCCACGGCCTGGGAGGGTGGTTCCTGTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 90 bp CTGCAGGGGCACTCGAGCCCCTTCTTGGTGACATCCAGCAGCTGGTaGCCTGCAGACCTGCTCTGTCAGCCACTCACCCAGAGGCAGCCT +
Preference number: 1 (lower is better)
Translates to: LQGHSSPFLVTSSSW*PADLLCQPLTQRQP
Trigger: AGGCTGCCTCTGGGTGAGTGGCTGACAGAGCAGGTCTGCAGGCCACCAGCTGCTGGATGTCACCAAGAAGGGGCTCGAGTGCCCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 90 bp CGGCCCACTGTGTGGCAAGAAAGCAGAATGGAGAACGGGACGAGGTaGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCACTCGA +
Preference number: 1 (lower is better)
Translates to: RPTVWQESRMENGTR*AHTGDWTLPCRGTR
Trigger: TCGAGTGCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTCCATTCTGCTTTCTTGCCACACAGTGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 90 bp AGGGTGTGTACAGCCCCACCCACTGCATTCCCACTGAACCAGGACTaGGGCAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAG +
Preference number: 1 (lower is better)
Translates to: RVCTAPPTAFPLNQD*GKERLIPPCGAGRE
Trigger: CTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTGCCCCAGTCCTGGTTCAGTGGGAATGCAGTGGGTGGGGCTGTACACACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 90 bp CTGCCAGTCTCTGAACCACGTTCCTCCCGGGACCTAAGAGGACCTTaGAGGGAACAGTCTGTGCTGGAGGGTGTGTACAGCCCCACCCAC +
Preference number: 1 (lower is better)
Translates to: LPVSEPRSSRDLRGP*REQSVLEGVYSPTH
Trigger: GTGGGTGGGGCTGTACACACCCTCCAGCACAGACTGTTCCCTCCAAGGTCCTCTTAGGTCCCGGGAGGAACGTGGTTCAGAGACTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 90 bp CCAGCCCTGAGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTaGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCT +
Preference number: 1 (lower is better)
Translates to: PALSGAGLAVMECIM*ECSWRGHAAWDRVP
Trigger: AGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACTCAGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR GCA 90 bp GGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATaGGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCAGGC +
Preference number: 1 (lower is better)
Translates to: GCDGMYYVGMFLEGP*GLGPGSFWVRPQSG
Trigger: GCCTGATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCGCTGGCTGGGGCTCCTaGACTCGGCCCCTAGCCAGA +
Preference number: 2 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPAGWGS*TRPLAR
Trigger: TCTGGCTAGGGGCCGAGTCCAGGAGCCCCAGCCAGC...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCAGGGGCCATGCGGCCTaGGACCGGGTTCCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPRGHAA*DRVPSG
Trigger: CCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCT...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAATTCCTGGAGGGGCCATaGGGCCTGGGACCGGGTTCC +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQFLEGP*GLGPGS
Trigger: GGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGGAA...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCCGAGCCCCTTCTTGGTaGCATCCAGCAGCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPIRAPSW*HPAAGG
Trigger: GCCACCAGCTGCTGGATGTCACCAAGAAGGGGCTCG...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCCTGGGAAGGGCTGGCTaGGGCTCCTGGACTCGGCCC +
Preference number: 2 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTLGRAG*GSWTRP
Trigger: GGGCCGAGTCCAGGAGCCCCAGCCAGCCCTTCCCAG...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACTGCCCCGGGCTCCCTaGCTGCCAGTCTCTGAACCA +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQLPRAP*LPVSEP
Trigger: TGGTTCAGAGACTGGCAGCCAGGGAGCCCGGGGCAG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCCAGGGCCACCATATTaGGGCTACTGGGCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPPGPPY*GYWAQA
Trigger: GGCTTGGGCCCAGTAGCCCCAATATGGTGGCCCTGG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACAGAGTGACACCAGCTaGGAGGGCTGGGCAGCGGGT +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQQSDTS*EGWAAG
Trigger: ACCCGCTGCCCAGCCCTCCCAGCTGGTGTCACTCTG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGCAGGGGTGTGGTGGTaGTGCTCTCCTGAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQAGVWW*CSPEAL
Trigger: CAAGGCCTCAGGAGAGCATCACCACCACACCCCTGC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACCCGGGCTCCCTGGCTaGCAGTCTCTGAACCACGTT +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQPGLPG*QSLNHV
Trigger: AACGTGGTTCAGAGACTGGCAGCCAGGGAGCCCGGG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCCTCCGAGAAGCAGTGTaGTGGGCTCCCACTAGGGCT +
Preference number: 2 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPILREAV*WAPTRA
Trigger: AGCCCTAGTGGGAGCCCAGCACACTGCTTCTCGGAG...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCTGGCCTGGGAAGGGCTaGCTGGGGCTCCTGGACTCG +
Preference number: 2 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTWPGKG*LGLLDS
Trigger: CGAGTCCAGGAGCCCCAGCCAGCCCTTCCCAGGCCA...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGAGACCAGGGGAGCCTaGGGCCGGCCCACTGTGTGG +
Preference number: 2 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGETRGA*GRPTVW
Trigger: CCACACAGTGGGCCGGCCCCAGGCTCCCCTGGTCTC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACCAGGGCCACCATATTaGGGCTACTGGGCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQPGPPY*GYWAQA
Trigger: GGCTTGGGCCCAGTAGCCCCAATATGGTGGCCCTGG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACCACTGCATTCCCACTaGACCAGGACTGGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQPLHSH*TRTGAR
Trigger: CCTTGCCCCAGTCCTGGTTCAGTGGGAATGCAGTGG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCTGCTCCTGGCAGGATaGAGGTTTCTTGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPLLLAG*RFLGGG
Trigger: TCCACCCCCAAGAAACCTCCATCCTGCCAGGAGCAG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCACATCCAGCAGCTGGTaGCCTGCAGACCTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPITSSSW*PADLLC
Trigger: ACAGAGCAGGTCTGCAGGCCACCAGCTGCTGGATGT...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGAGAACGGGACGAGGTaGGCTCACACCGGAGATTGG +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQENGTR*AHTGDW
Trigger: CCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCCACTGAACCAGGACTaGGGCAAGGAGAGGCTCATC +
Preference number: 2 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPPLNQD*GKERLI
Trigger: GATGAGCCTCTCCTTGCCCCAGTCCTGGTTCAGTGG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACAAGCTGCTGGGCCATaGGAGGGGCACTACAGGAAG +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQQAAGP*EGHYRK
Trigger: CTTCCTGTAGTGCCCCTCCCATGGCCCAGCAGCTTG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCACGGGTTCCTTCTGGGTaGGGCCCCAATCAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPRVPSG*GPNQAG
Trigger: TCCCGCCTGATTGGGGCCTCACCCAGAAGGAACCCG...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCCTCACCACTCAGGCTTaGCCCACAGTGGGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTLTTQA*PTVGGL
Trigger: CAGGCCACCCACTGTGGGGCAAGCCTGAGTGGTGAG...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGGAGGGAACAGTCTGTaGTGGAGGGTGTGTACAGCC +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQGGNSL*WRVCTA
Trigger: GGCTGTACACACCCTCCAGCACAGACTGTTCCCTCC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCTTGGAGGCTGCTCCTaGCAGGATGGAGGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPLGGCS*QDGGFL
Trigger: CAAGAAACCTCCATCCTGCCAGGAGCAGCCTCCAAG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAGCTCACACCGGAGATTaGACCCTCCCCTGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPAHTGD*TLPCRG
Trigger: GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGC...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCAGGCTTGCCCCACAGTaGGTGGCCTGGTACCCAGCT +
Preference number: 2 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTRLAPQ*VAWYPA
Trigger: AGCTGGGTACCAGGCCACCCACTGTGGGGCAAGCCT...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCCAGGGTTTGTGCTTTTaGATGTTGGTCAGCCGGGCT +
Preference number: 2 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPIQGLCF*MLVSRA
Trigger: AGCCCGGCTGACCAACATTCAAAAGCACAAACCCTG...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTCCCAGCTGGTCCCTCTaGGGTCCTGAGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSPSWSL*GPEVRG
Trigger: GCCCCTCACCTCAGGACCCCAGAGGGACCAGCTGGG...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAATTCTCCATCCCCAGATaGAGGGGACAGCCAAGCAGA +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQFSIPR*RGQPSR
Trigger: TCTGCTTGGCTGTCCCCTCCATCTGGGGATGGAGAA...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGAGCTGGGCTGGCTGTaGTGGAATGTATTATGTGGG +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQELGWL*WNVLCG
Trigger: CCCACATAATACATTCCATCACAGCCAGCCCAGCTC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAAAGTTTCTTGGAGGCTaGTCCTGGCAGGATGGAGGT +
Preference number: 2 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQKFLGG*SWQDGG
Trigger: ACCTCCATCCTGCCAGGAGCAGCCTCCAAGAAACTT...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCATGGCCTCCGCCATACTaGCTTTCCTCTGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPWPPPY*LSSEGP
Trigger: AGGGCCCTCAGAGGAAAGGCAGTATGGCGGAGGCCA...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGGCAGCCTCGCCTCGCTaGCCTGGGAAGGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWAASPR*PGKGWL
Trigger: CAGCCAGCCCTTCCCAGGCCAGCGAGGCGAGGCTGC...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGCTCACACCGGAGATTaGACCCTCCCCTGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGAHTGD*TLPCRG
Trigger: GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGTAGTGGGCAGAGAGTaGCTACGGGGAGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGVVGRE*LRGGDQ
Trigger: CTGGTCTCCTCCCCGTAGCCACTCTCTGCCCACTAC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCATTGCCCCACAGTGGGTaGCCTGGTACCCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPLPHSG*PGTQLF
Trigger: GAAGAGCTGGGTACCAGGCCACCCACTGTGGGGCAA...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCCCACTGAACCAGGACTaGGGCAAGGAGAGGCTCATC +
Preference number: 2 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTPLNQD*GKERLI
Trigger: GATGAGCCTCTCCTTGCCCCAGTCCTGGTTCAGTGG...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCACCATATTGGGGCTACTaGGCCCAAGCCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPPYWGY*AQASAS
Trigger: GCTGGCTGAGGCTTGGGCCCAGTAGCCCCAATATGG...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCTGTGCTTTTGAATGTTaGTCAGCCGGGCTGGGCTTT +
Preference number: 2 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPCAFEC*SAGLGF
Trigger: AAAGCCCAGCCCGGCTGACCAACATTCAAAAGCACA...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTCGAGCCCCTTCTTGGTaGCATCCAGCAGCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSRAPSW*HPAAGG
Trigger: GCCACCAGCTGCTGGATGTCACCAAGAAGGGGCTCG...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGCAGCCTCGCCTCGCTaGCCTGGGAAGGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCAASPR*PGKGWL
Trigger: CAGCCAGCCCTTCCCAGGCCAGCGAGGCGAGGCTGC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAGGCCGGCCCACTGTGTaGCAAGAAAGCAGAATGGAG +
Preference number: 2 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPGRPTV*QESRME
Trigger: CTCCATTCTGCTTTCTTGCCACACAGTGGGCCGGCC...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGGCCGGCCCACTGTGTaGCAAGAAAGCAGAATGGAG +
Preference number: 2 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGGRPTV*QESRME
Trigger: CTCCATTCTGCTTTCTTGCCACACAGTGGGCCGGCC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGAGACCAGGGGAGCCTaGGGCCGGCCCACTGTGTGG +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCETRGA*GRPTVW
Trigger: CCACACAGTGGGCCGGCCCCAGGCTCCCCTGGTCTC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGCTGGCTGCCAGTCTCTaGACCACGTTCCTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLLAASL*TTFLPG
Trigger: TCCCGGGAGGAACGTGGTTCAGAGACTGGCAGCCAG...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCATACAGCCCCACCCACTaGATTCCCACTGAACCAGGA +
Preference number: 2 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPYSPTH*IPTEPG
Trigger: TCCTGGTTCAGTGGGAATGCAGTGGGTGGGGCTGTA...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGCTGGCTGGGGCTCCTaGACTCGGCCCCTAGCCAGA +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCAGWGS*TRPLAR
Trigger: TCTGGCTAGGGGCCGAGTCCAGGAGCCCCAGCCAGC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCTGGGAAGGGCTGGCTaGGGCTCCTGGACTCGGCCC +
Preference number: 2 (lower is better)
Translates to: SGAGLAVMECIMWECSWRLGRAG*GSWTRP
Trigger: GGGCCGAGTCCAGGAGCCCCAGCCAGCCCTTCCCAG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCTGGCCTGGGAAGGGCTaGCTGGGGCTCCTGGACTCG +
Preference number: 2 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFWPGKG*LGLLDS
Trigger: CGAGTCCAGGAGCCCCAGCCAGCCCTTCCCAGGCCA...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTGTAGTGGGCAGAGAGTaGCTACGGGGAGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSVVGRE*LRGGDQ
Trigger: CTGGTCTCCTCCCCGTAGCCACTCTCTGCCCACTAC...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCCCAGCTGGTCCCTCTaGGGTCCTGAGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCPSWSL*GPEVRG
Trigger: GCCCCTCACCTCAGGACCCCAGAGGGACCAGCTGGG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CAA 90 bp GCAGAGAGTGCCCTCAGATTCTCCACCACGACCCAATCCCTAAACTaGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: AESALRFSTTTQSLN*KSPAFLPWRENGAQ
Trigger: CTGGGCCCCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTCGTGGTGGAGAATCTGAGGGCACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCGGGTTCCTTCTGGGTaGGGCCCCAATCAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCRVPSG*GPNQAG
Trigger: TCCCGCCTGATTGGGGCCTCACCCAGAAGGAACCCG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGCCACAGTGGGTGGCCTaGTACCCAGCTCTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLPQWVA*YPALPG
Trigger: ACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCCCGCCTTCCTGCCATaGAGGGAGAATGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCPAFLP*RENGAQ
Trigger: CTGGGCCCCATTCTCCCTCCATGGCAGGAAGGCGGG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGACTGCCCCGGGCTCCCTaGCTGCCAGTCTCTGAACCA +
Preference number: 2 (lower is better)
Translates to: RNACAFCARQRDGDTASGLPRAP*LPVSEP
Trigger: TGGTTCAGAGACTGGCAGCCAGGGAGCCCGGGGCAG...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGCATCTCTCTCCTCCTaGGGGTTTCTGCTGACCACC +
Preference number: 2 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGASLSS*GFLLTT
Trigger: GGTGGTCAGCAGAAACCCCCAGGAGGAGAGAGATGC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTCTCTGCCAGCCCAGATaGATGGCTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSLCQPR*MAVCVC
Trigger: ACACACACACACAGCCATTCATCTGGGCTGGCAGAG...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCTGGCTGCCAGTCTCTaGACCACGTTCCTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCLAASL*TTFLPG
Trigger: TCCCGGGAGGAACGTGGTTCAGAGACTGGCAGCCAG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGCCACAGTGGGTGGCCTaGTACCCAGCTCTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWPQWVA*YPALPG
Trigger: ACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCAGGCTTGCCCCACAGTaGGTGGCCTGGTACCCAGCT +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCRLAPQ*VAWYPA
Trigger: AGCTGGGTACCAGGCCACCCACTGTGGGGCAAGCCT...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGAGAATGGGGCCCAGTaGCCCCTCACCACTCAGGCT +
Preference number: 2 (lower is better)
Translates to: RNACAFCARQRDGDTASGENGAQ*PLTTQA
Trigger: AGCCTGAGTGGTGAGGGGCCACTGGGCCCCATTCTC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGCTCATCCCACCCTGTaGAGCTGGCAGAGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: RNACAFCARQRDGDTASGAHPTL*SWQRVP
Trigger: GGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCGAGAAGCAGTGTGCTaGGCTCCCACTAGGGCTGCG +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCREAVC*APTRAA
Trigger: CGCAGCCCTAGTGGGAGCCCAGCACACTGCTTCTCG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGCCAGCAGGAGGGCCTaGCCTCCGAGAAGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: SGAGLAVMECIMWECSWRASRRA*PPRSSV
Trigger: CACACTGCTTCTCGGAGGCCAGGCCCTCCTGCTGGC...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCTCCATCCCCAGATaGAGGGGACAGCCAAGCAGA +
Preference number: 2 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGFSIPR*RGQPSR
Trigger: TCTGCTTGGCTGTCCCCTCCATCTGGGGATGGAGAA...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGCAGGGTTTGTGCTTTTaGATGTTGGTCAGCCGGGCT +
Preference number: 2 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGQGLCF*MLVSRA
Trigger: AGCCCGGCTGACCAACATTCAAAAGCACAAACCCTG...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAAATCCCCCGCCTTCCTaGCATGGAGGGAGAATGGGG +
Preference number: 2 (lower is better)
Translates to: RNACAFCARQRDGDTASGNPPPS*HGGRMG
Trigger: CCCCATTCTCCCTCCATGGCAGGAAGGCGGGGGATT...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAATCCCCCGCCTTCCTaGCATGGAGGGAGAATGGGG +
Preference number: 2 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFNPPPS*HGGRMG
Trigger: CCCCATTCTCCCTCCATGGCAGGAAGGCGGGGGATT...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCTCCGAGAAGCAGTGTaGTGGGCTCCCACTAGGGCT +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCLREAV*WAPTRA
Trigger: AGCCCTAGTGGGAGCCCAGCACACTGCTTCTCGGAG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGGTGGAGGTGGCTGTaGCCATGCACTCCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCGWRWL*PCTPLD
Trigger: GTCCAAAGGAGTGCATGGCCACAGCCACCTCCACCC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGTGACATCCAGCAGCTaGTGGCCTGCAGACCTGCTC +
Preference number: 2 (lower is better)
Translates to: RNACAFCARQRDGDTASGVTSSS*WPADLL
Trigger: GAGCAGGTCTGCAGGCCACCAGCTGCTGGATGTCAC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGGGCAAGAAAGCAGAATaGAGAACGGGACGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLGKKAE*RTGRGG
Trigger: CCCACCTCGTCCCGTTCTCCATTCTGCTTTCTTGCC...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGCTCATCCCACCCTGTaGAGCTGGCAGAGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: SGAGLAVMECIMWECSWRAHPTL*SWQRVP
Trigger: GGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGC...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCCAAGCTGCTGGGCCATaGGAGGGGCACTACAGGAAG +
Preference number: 2 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFQAAGP*EGHYRK
Trigger: CTTCCTGTAGTGCCCCTCCCATGGCCCAGCAGCTTG...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCGAGAAGCAGTGTGCTaGGCTCCCACTAGGGCTGCG +
Preference number: 2 (lower is better)
Translates to: SGAGLAVMECIMWECSWRREAVC*APTRAA
Trigger: CGCAGCCCTAGTGGGAGCCCAGCACACTGCTTCTCG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGGAGGGAACAGTCTGTaGTGGAGGGTGTGTACAGCC +
Preference number: 2 (lower is better)
Translates to: RNACAFCARQRDGDTASGGGNSL*WRVCTA
Trigger: GGCTGTACACACCCTCCAGCACAGACTGTTCCCTCC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGGTGGAGGTGGCTGTaGCCATGCACTCCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: SGAGLAVMECIMWECSWRGWRWL*PCTPLD
Trigger: GTCCAAAGGAGTGCATGGCCACAGCCACCTCCACCC...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCACATCCAGCAGCTGGTaGCCTGCAGACCTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFTSSSW*PADLLC
Trigger: ACAGAGCAGGTCTGCAGGCCACCAGCTGCTGGATGT...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGAGAACGGGACGAGGTaGGCTCACACCGGAGATTGG +
Preference number: 2 (lower is better)
Translates to: SGAGLAVMECIMWECSWRENGTR*AHTGDW
Trigger: CCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGAGTAGCAGGGGATCCTaGGACCCCCAGGGAAGAATT +
Preference number: 2 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWSSRGS*DPQGRI
Trigger: AATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACT...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGTGTGCTTTTGAATGTTaGTCAGCCGGGCTGGGCTTT +
Preference number: 2 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGCAFEC*SAGLGF
Trigger: AAAGCCCAGCCCGGCTGACCAACATTCAAAAGCACA...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR TCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGACTCTGCCAGCCCAGATaGATGGCTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: RNACAFCARQRDGDTASGLCQPR*MAVCVC
Trigger: ACACACACACACAGCCATTCATCTGGGCTGGCAGAG...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGAAGTTTCTTGGAGGCTaGTCCTGGCAGGATGGAGGT +
Preference number: 2 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWKFLGG*SWQDGG
Trigger: ACCTCCATCCTGCCAGGAGCAGCCTCCAAGAAACTT...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTGAATTTCCAGAAAGCTaGAGGCTTGGCCTCCATTAC +
Preference number: 2 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSEFPES*RLGLHY
Trigger: GTAATGGAGGCCAAGCCTGCAGCTTTCTGGAAATTC...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCTGCTCCTGGCAGGATaGAGGTTTCTTGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: SGAGLAVMECIMWECSWRLLLAG*RFLGGG
Trigger: TCCACCCCCAAGAAACCTCCATCCTGCCAGGAGCAG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCAAGAAAGCAGAATaGAGAACGGGACGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCGKKAE*RTGRGG
Trigger: CCCACCTCGTCCCGTTCTCCATTCTGCTTTCTTGCC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR GCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCGAATTTCCAGAAAGCTaGAGGCTTGGCCTCCATTAC +
Preference number: 2 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFEFPES*RLGLHY
Trigger: GTAATGGAGGCCAAGCCTGCAGCTTTCTGGAAATTC...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR TCA 72 bp AGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTaGGGCCCCAATCAGGCGGGAGCAGCATCTCTCTCC +
Preference number: 3 (lower is better)
Translates to: RGHAAWDRVPSG*GPNQAGAASLS
Trigger: GGAGAGAGATGCTGCTCCCGCCTGATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR GCA 72 bp CCTCCCAGGCCGTGGCCAAGGGAGACGCTTCTGCCATaGAGACATGCGGCCGGTCTGTGTCCCAGCGTGGGA +
Preference number: 3 (lower is better)
Translates to: PPRPWPRETLLP*RHAAGLCPSVG
Trigger: TCCCACGCTGGGACACAGACCGGCCGCATGTCTGCATGGCAGAAGCGTCTCCCTTGGCCACGGCCTGGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR GCA 72 bp ACCACCCTCCCAGGCCGTGGCCAAGGGAGACGCTTCTaGCATGCAGACATGCGGCCGGTCTGTGTCCCAGCG +
Preference number: 3 (lower is better)
Translates to: TTLPGRGQGRRF*HADMRPVCVPA
Trigger: CGCTGGGACACAGACCGGCCGCATGTCTGCATGGCAGAAGCGTCTCCCTTGGCCACGGCCTGGGAGGGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCACTCGAGCCCCTTCTaGGTGACATCCAGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPHSSPF*VTSSSW
Trigger: CCAGCTGCTGGATGTCACCAAGAAGGGGCTCGAGTG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 72 bp AAGGCCTCTTCCCCAGGGCCACCATATTGGGGCTACTaGGCCCAAGCCTCAGCCAGCAGGAGGGCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: KASSPGPPYWGY*AQASASRRAWP
Trigger: AGGCCAGGCCCTCCTGCTGGCTGAGGCTTGGGCCCAGTAGCCCCAATATGGTGGCCCTGGGGAAGAGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 72 bp GAGGCCAGGCTGTGTGTGAATGCCGAGGGGCCCCCATaGCCTCCGCCATACTGCCTTTCCTCTGAGGGCCCT +
Preference number: 3 (lower is better)
Translates to: EARLCVNAEGPP*PPPYCLSSEGP
Trigger: AGGGCCCTCAGAGGAAAGGCAGTATGGCGGAGGCCATGGGGGCCCCTCGGCATTCACACACAGCCTGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACACTCGAGCCCCTTCTaGGTGACATCCAGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQHSSPF*VTSSSW
Trigger: CCAGCTGCTGGATGTCACCAAGAAGGGGCTCGAGTG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCCATTGGCTCCAGCTTaGGGCTGGCATTCTCCATCC +
Preference number: 3 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPPLAPA*GWHSPS
Trigger: GGATGGAGAATGCCAGCCCAAAGCTGGAGCCAATGG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAATCTCAGCCCTCACCATaGGCTCCAGCTTTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQSQPSP*APALGW
Trigger: CCAGCCCAAAGCTGGAGCCAATGGTGAGGGCTGAGA...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCACCTCACCACTCAGGCTaGCCCCACAGTGGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPPHHSG*PHSGWP
Trigger: AGGCCACCCACTGTGGGGCAAGCCTGAGTGGTGAGG...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 72 bp CCCTCACCACTCAGGCTTGCCCCACAGTGGGTGGCCTaGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGG +
Preference number: 3 (lower is better)
Translates to: PSPLRLAPQWVA*YPALPGQWSSR
Trigger: CCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGGGGCAAGCCTGAGTGGTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGAATGCTTGTGCTTTTaGTGCAAGGCAGAGGGACGG +
Preference number: 3 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQECLCF*CKAEGR
Trigger: CCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR TCA 72 bp GGAGGGTGTGTACAGCCCCACCCACTGCATTCCCACTaGACCAGGACTGGGGCAAGGAGAGGCTCATCCCAC +
Preference number: 3 (lower is better)
Translates to: GGCVQPHPLHSH*TRTGARRGSSH
Trigger: GTGGGATGAGCCTCTCCTTGCCCCAGTCCTGGTTCAGTGGGAATGCAGTGGGTGGGGCTGTACACACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 72 bp CACTCGAGCCCCTTCTTGGTGACATCCAGCAGCTGGTaGCCTGCAGACCTGCTCTGTCAGCCACTCACCCAG +
Preference number: 3 (lower is better)
Translates to: HSSPFLVTSSSW*PADLLCQPLTQ
Trigger: CTGGGTGAGTGGCTGACAGAGCAGGTCTGCAGGCCACCAGCTGCTGGATGTCACCAAGAAGGGGCTCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 72 bp ACAGCCCCACCCACTGCATTCCCACTGAACCAGGACTaGGGCAAGGAGAGGCTCATCCCACCCTGTGGAGCT +
Preference number: 3 (lower is better)
Translates to: TAPPTAFPLNQD*GKERLIPPCGA
Trigger: AGCTCCACAGGGTGGGATGAGCCTCTCCTTGCCCCAGTCCTGGTTCAGTGGGAATGCAGTGGGTGGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGGGCTCACACCGGAGATaGGACCCTCCCCTGCAGGGG +
Preference number: 3 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWGSHRR*DPPLQG
Trigger: CCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCC...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCACAGAAAGCTGCAGGCTaGGCCTCCATTACCCCCTCT +
Preference number: 3 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPQKAAG*ASITPS
Trigger: AGAGGGGGTAATGGAGGCCAAGCCTGCAGCTTTCTG...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR GCA 72 bp GGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATaGGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: GMYYVGMFLEGP*GLGPGSFWVRP
Trigger: GGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 72 bp GTGTGGCAAGAAAGCAGAATGGAGAACGGGACGAGGTaGGCTCACACCGGAGATTGGACCCTCCCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: VWQESRMENGTR*AHTGDWTLPCR
Trigger: CCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTCCATTCTGCTTTCTTGCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 72 bp CACACGGGGACTCCCCGGGCCAGCCCTGAGTGGAGCTaGGCTGGCTGTGATGGAATGTATTATGTGGGAATG +
Preference number: 3 (lower is better)
Translates to: HTGTPRASPEWS*AGCDGMYYVGM
Trigger: CATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACTCAGGGCTGGCCCGGGGAGTCCCCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAGGACCTAAGAGGACCTaGGAGGGAACAGTCTGTGCT +
Preference number: 3 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPGPKRT*EGTVCA
Trigger: AGCACAGACTGTTCCCTCCAAGGTCCTCTTAGGTCC...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGCAGAAAGCTGCAGGCTaGGCCTCCATTACCCCCTCT +
Preference number: 3 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGQKAAG*ASITPS
Trigger: AGAGGGGGTAATGGAGGCCAAGCCTGCAGCTTTCTG...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGCCATTGGCTCCAGCTTaGGGCTGGCATTCTCCATCC +
Preference number: 3 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGPLAPA*GWHSPS
Trigger: GGATGGAGAATGCCAGCCCAAAGCTGGAGCCAATGG...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCCCAGGGCCACCATATaGGGGCTACTGGGCCCAAGC +
Preference number: 3 (lower is better)
Translates to: SGAGLAVMECIMWECSWRPRATI*GLLGPS
Trigger: GCTTGGGCCCAGTAGCCCCAATATGGTGGCCCTGGG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR GCA 72 bp GAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTaGCCTCAGATTCTCCACCACGACCCAATCCCTAAA +
Preference number: 3 (lower is better)
Translates to: ERLIPPCGAGRE*PQILHHDPIPK
Trigger: TTTAGGGATTGGGTCGTGGTGGAGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 72 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTaGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: SGAGLAVMECIM*ECSWRGHAAWD
Trigger: GTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGGGACCTAAGAGGACCTaGGAGGGAACAGTCTGTGCT +
Preference number: 3 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLGPKRT*EGTVCA
Trigger: AGCACAGACTGTTCCCTCCAAGGTCCTCTTAGGTCC...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CCA 72 bp CTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTaGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: LAVMECIMWECS*RGHAAWDRVPS
Trigger: AGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGGAATGCTTGTGCTTTTaGTGCAAGGCAGAGGGACGG +
Preference number: 3 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLECLCF*CKAEGR
Trigger: CCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTC...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGCTGCTAAGGAATGCTaGTGCTTTTTGTGCAAGGCA +
Preference number: 3 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGAAKEC*CFLCKA
Trigger: TGCCTTGCACAAAAAGCACAAGCATTCCTTAGCAGC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGACCCAATCCCTAAACTaGAAATCCCCCGCCTTCCTG +
Preference number: 3 (lower is better)
Translates to: SGAGLAVMECIMWECSWRTQSLN*KSPAFL
Trigger: CAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGT...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR-3UTR CAA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGCTGCTAAGGAATGCTaGTGCTTTTTGTGCAAGGCA +
Preference number: 3 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCAAKEC*CFLCKA
Trigger: TGCCTTGCACAAAAAGCACAAGCATTCCTTAGCAGC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCAGCCCCTCTGGCTGGTaGCGCACCGTGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPISPSGW*RTVDSS
Trigger: GGAGCTGTCCACGGTGCGCCACCAGCCAGAGGGGCT...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGCAGCCTCGCCTCGCTaGCCTGGGAAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQAASPR*PGKGWL
Trigger: CAGCCAGCCCTTCCCAGGCCAGCGAGGCGAGGCTGC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCCCAGCTGGTCCCTCTaGGGTCCTGAGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPPSWSL*GPEVRG
Trigger: GCCCCTCACCTCAGGACCCCAGAGGGACCAGCTGGG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCCTGGGGCTAGCCTCTTaGGGCACACGGGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPILGLAS*GTRGLP
Trigger: GGGGAGTCCCCGTGTGCCCCAAGAGGCTAGCCCCAG...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCCCCAGCTGGTCCCTCTaGGGTCCTGAGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGPSWSL*GPEVRG
Trigger: GCCCCTCACCTCAGGACCCCAGAGGGACCAGCTGGG...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCGCCGAGGGGCCCCCATaGCCTCCGCCATACTGCCTT +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGAEGPP*PPPYCL
Trigger: AAGGCAGTATGGCGGAGGCCATGGGGGCCCCTCGGC...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCAGGCCAGGCTGTGTGTaGATGCCGAGGGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGRPGCV*MPRGPH
Trigger: ATGGGGGCCCCTCGGCATTCACACACAGCCTGGCCT...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCGGAGCCAGGCGTCCATaGAGCTCCGCAGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTGARRP*SSAGEA
Trigger: GGCCTCCCCTGCGGAGCTGCATGGACGCCTGGCTCC...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGCTCACACCGGAGATTaGACCCTCCCCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQAHTGD*TLPCRG
Trigger: GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCGCTCATCCCACCCTGTaGAGCTGGCAGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPAHPTL*SWQRVP
Trigger: GGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGC...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCCAGCTCACTGTCGCTaGTATCTGAGCCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPPAHCR*YLSPVG
Trigger: CCCCACAGGGCTCAGATAGCAGCGACAGTGAGCTGG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACTCACCACTCAGGCTTaGCCCACAGTGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQLTTQA*PTVGGL
Trigger: CAGGCCACCCACTGTGGGGCAAGCCTGAGTGGTGAG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCTCTGCCATGCAGACATaGGGCCGGTCTGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPISAMQT*GRSVSQ
Trigger: CTGGGACACAGACCGGCCGCATGTCTGCATGGCAGA...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCACTTGAGCTTCTCGTaGACTGTGCCCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPHLSFS*TVPRSR
Trigger: CCTGCTGCGGGGCACAGTCCACGAGAAGCTCAAGTG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGACTGGGAAGGGCTGGCTaGGGCTCCTGGACTCGGCCC +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGLGRAG*GSWTRP
Trigger: GGGCCGAGTCCAGGAGCCCCAGCCAGCCCTTCCCAG...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAGCAGCCTCGCCTCGCTaGCCTGGGAAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPAASPR*PGKGWL
Trigger: CAGCCAGCCCTTCCCAGGCCAGCGAGGCGAGGCTGC...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCCCACAGTGGGTGGCCTaGTACCCAGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPIPQWVA*YPALPG
Trigger: ACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCGCTCATCCCACCCTGTaGAGCTGGCAGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGAHPTL*SWQRVP
Trigger: GGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGC...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCCAAGCTGCTGGGCCATaGGAGGGGCACTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPIQAAGP*EGHYRK
Trigger: CTTCCTGTAGTGCCCCTCCCATGGCCCAGCAGCTTG...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCCATATTGGGGCTACTaGGCCCAAGCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPPYWGY*AQASAS
Trigger: GCTGGCTGAGGCTTGGGCCCAGTAGCCCCAATATGG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACAGACCCCTCCTGGTTaGGCTGTGCAGCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQQTPPG*AVQPVW
Trigger: CCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCCGAGGCAGACAAGACTaGCCAGGCCGGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTRGRQD*PGRLAA
Trigger: AGCTGCCAGCCGGCCTGGGCAGTCTTGTCTGCCTCG...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295225.10
CDS-3UTR GCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCAAGAACCTCTCCACGTaGTCCGCCGGCGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTKNLST*SAGASS
Trigger: GGAGGACGCGCCGGCGGAGCACGTGGAGAGGTTCTT...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCCTCCGAGAAGCAGTGTaGTGGGCTCCCACTAGGGCT +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGLREAV*WAPTRA
Trigger: AGCCCTAGTGGGAGCCCAGCACACTGCTTCTCGGAG...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAAGCCCCTCTGGCTGGTaGCGCACCGTGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGSPSGW*RTVDSS
Trigger: GGAGCTGTCCACGGTGCGCCACCAGCCAGAGGGGCT...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCATCCAGCCCCTCTGGCTaGTGGCGCACCGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPSSPSG*WRTVDS
Trigger: GCTGTCCACGGTGCGCCACCAGCCAGAGGGGCTGGA...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGACTGGTCCAGCCCCTCTaGCTGGTGGCGCACCGTGGA +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGLVQPL*LVAHRG
Trigger: TCCACGGTGCGCCACCAGCCAGAGGGGCTGGACCAG...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCACGTCCTCCCGCAGGATaGGGTAGGTGTGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPRPPAG*GRCGGP
Trigger: TGGGCCGCCACACCTACCCCATCCTGCGGGAGGACG...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGGGTGGAGGTGGCTGTaGCCATGCACTCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQGWRWL*PCTPLD
Trigger: GTCCAAAGGAGTGCATGGCCACAGCCACCTCCACCC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGATGGCCTGGGAAGGGCTaGCTGGGGCTCCTGGACTCG +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGWPGKG*LGLLDS
Trigger: CGAGTCCAGGAGCCCCAGCCAGCCCTTCCCAGGCCA...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGTGACATCCAGCAGCTaGTGGCCTGCAGACCTGCTC +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQVTSSS*WPADLL
Trigger: GAGCAGGTCTGCAGGCCACCAGCTGCTGGATGTCAC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCGTAGTGGGCAGAGAGTaGCTACGGGGAGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGVVGRE*LRGGDQ
Trigger: CTGGTCTCCTCCCCGTAGCCACTCTCTGCCCACTAC...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCTTGCCCCACAGTGGGTaGCCTGGTACCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGLPHSG*PGTQLF
Trigger: GAAGAGCTGGGTACCAGGCCACCCACTGTGGGGCAA...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACCCACCCTGTGGAGCTaGCAGAGAGTGCCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQPTLWS*QRVPSD
Trigger: ATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCGCCAGCAGGAGGGCCTaGCCTCCGAGAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTASRRA*PPRSSV
Trigger: CACACTGCTTCTCGGAGGCCAGGCCCTCCTGCTGGC...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCGCATCTCTCTCCTCCTaGGGGTTTCTGCTGACCACC +
Preference number: 4 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPIASLSS*GFLLTT
Trigger: GGTGGTCAGCAGAAACCCCCAGGAGGAGAGAGATGC...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCCTCTGCCAGCCCAGATaGATGGCTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPILCQPR*MAVCVC
Trigger: ACACACACACACAGCCATTCATCTGGGCTGGCAGAG...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCCGAGCCCCTTCTTGGTaGCATCCAGCAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTRAPSW*HPAAGG
Trigger: GCCACCAGCTGCTGGATGTCACCAAGAAGGGGCTCG...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCGCCTTAGAGGCAGAGTaGCACCAGCTGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTALEAE*HQLGGL
Trigger: CAGCCCTCCCAGCTGGTGTCACTCTGCCTCTAAGGC...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAAAGAACCTCTCCACGTaGTCCGCCGGCGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPKNLST*SAGASS
Trigger: GGAGGACGCGCCGGCGGAGCACGTGGAGAGGTTCTT...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCGGAGGGAACAGTCTGTaGTGGAGGGTGTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGGGNSL*WRVCTA
Trigger: GGCTGTACACACCCTCCAGCACAGACTGTTCCCTCC...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGGAGCCAGGCGTCCATaGAGCTCCGCAGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGGARRP*SSAGEA
Trigger: GGCCTCCCCTGCGGAGCTGCATGGACGCCTGGCTCC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAATGCCCCGCAGCAGGATaGAGAGGCCAACCACAAAGT +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQCPAAG*RGQPQS
Trigger: ACTTTGTGGTTGGCCTCTCCATCCTGCTGCGGGGCA...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCAGAAAGCTGCAGGCTTaGCCTCCATTACCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPIRKLQA*PPLPPL
Trigger: GAGAGGGGGTAATGGAGGCCAAGCCTGCAGCTTTCT...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCCGAGAAGCAGTGTGCTaGGCTCCCACTAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTREAVC*APTRAA
Trigger: CGCAGCCCTAGTGGGAGCCCAGCACACTGCTTCTCG...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGAGGGACGGCGACACTaGTTCAGGAGAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGEGRRH*FRRGGS
Trigger: TGAGCCCCCTCTCCTGAAGCAGTGTCGCCGTCCCTC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTGCTGGCTGGGGCTCCTaGACTCGGCCCCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSAGWGS*TRPLAR
Trigger: TCTGGCTAGGGGCCGAGTCCAGGAGCCCCAGCCAGC...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCTGGGAAGGGCTGGCTaGGGCTCCTGGACTCGGCCC +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLLGRAG*GSWTRP
Trigger: GGGCCGAGTCCAGGAGCCCCAGCCAGCCCTTCCCAG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTTGGCCTGGGAAGGGCTaGCTGGGGCTCCTGGACTCG +
Preference number: 4 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSWPGKG*LGLLDS
Trigger: CGAGTCCAGGAGCCCCAGCCAGCCCTTCCCAGGCCA...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCGAGAACGGGACGAGGTaGGCTCACACCGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTENGTR*AHTGDW
Trigger: CCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCGGCAAGAAAGCAGAATaGAGAACGGGACGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGGKKAE*RTGRGG
Trigger: CCCACCTCGTCCCGTTCTCCATTCTGCTTTCTTGCC...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGGAGACCAGGGGAGCCTaGGGCCGGCCCACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLETRGA*GRPTVW
Trigger: CCACACAGTGGGCCGGCCCCAGGCTCCCCTGGTCTC...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAAGTAGCAGGGGATCCTaGGACCCCCAGGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQSSRGS*DPQGRI
Trigger: AATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACT...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAAGGCTTGCCCCACAGTaGGTGGCCTGGTACCCAGCT +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPRLAPQ*VAWYPA
Trigger: AGCTGGGTACCAGGCCACCCACTGTGGGGCAAGCCT...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCCCATATTGGGGCTACTaGGCCCAAGCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTPYWGY*AQASAS
Trigger: GCTGGCTGAGGCTTGGGCCCAGTAGCCCCAATATGG...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAGAGGCAGACCCCTCCTaGTTGGGCTGTGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPEADPS*LGCAAS
Trigger: ACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTC...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGAGGCAGACCCCTCCTaGTTGGGCTGTGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGEADPS*LGCAAS
Trigger: ACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAACCGCATCAAAGGCGTTaGAGAGGAAGTGTGCATAGG +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQPHQRR*RGSVHR
Trigger: CCTATGCACACTTCCTCTTCAACGCCTTTGATGCGG...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGAGGCCAGGCTGTGTGTaGATGCCGAGGGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGRPGCV*MPRGPH
Trigger: ATGGGGGCCCCTCGGCATTCACACACAGCCTGGCCT...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGGTCCCCCAGGAGGCTaGCGTCCGACGCCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGGPPGG*RPTPLS
Trigger: TGACAAAGGCGTCGGACGGCAGCCTCCTGGGGGACC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCAAGTTTCTTGGAGGCTaGTCCTGGCAGGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGKFLGG*SWQDGG
Trigger: ACCTCCATCCTGCCAGGAGCAGCCTCCAAGAAACTT...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGTTCCTGGAGGGGCCATaGGGCCTGGGACCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLFLEGP*GLGPGS
Trigger: GGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGGAA...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAGAGACGCTTCTGCCATaGAGACATGCGGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPETLLP*RHAAGL
Trigger: CAGACCGGCCGCATGTCTGCATGGCAGAAGCGTCTC...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCCTCCTTCTTGCTAAGTaGTGTGTGCCCGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTLLLAK*CVPEVP
Trigger: GGGGACCTCGGGCACACACCACTTAGCAAGAAGGAG...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCACATCTCATCAAAGCCTaGCGGCTGAGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPHLIKA*RLSLGL
Trigger: GAGGCCGAGGCTCAGCCGCCAGGCTTTGATGAGATG...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGTCCAGCCCCTCTGGCTaGTGGCGCACCGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLSSPSG*WRTVDS
Trigger: GCTGTCCACGGTGCGCCACCAGCCAGAGGGGCTGGA...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGTGACATCCAGCAGCTaGTGGCCTGCAGACCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGVTSSS*WPADLL
Trigger: GAGCAGGTCTGCAGGCCACCAGCTGCTGGATGTCAC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGAGGGGCCATGCGGCCTaGGACCGGGTTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLRGHAA*DRVPSG
Trigger: CCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCT...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGCACCCTCCCAGGCCGTaGCCAAGGGAGACGCTTCTG +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGHPPRP*PRETLL
Trigger: CAGAAGCGTCTCCCTTGGCCACGGCCTGGGAGGGTG...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGCGAGCCCCTTCTTGGTaGCATCCAGCAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGRAPSW*HPAAGG
Trigger: GCCACCAGCTGCTGGATGTCACCAAGAAGGGGCTCG...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCAATATTAGTGGATGCTaGGAACAGGAACCACCCTCC +
Preference number: 4 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPNISGC*EQEPPS
Trigger: GGAGGGTGGTTCCTGTTCTCAGCATCCACTAATATT...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGACTGAGCCTCGGCCTCTaGCACTTGATACCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGLSLGL*HLIPSF
Trigger: GAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAG...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAAGGTGGCTGTGGCCATaGACTCCTTTGGACGTGTCC +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGRWLWP*TPLDVS
Trigger: GGACACGTCCAAAGGAGTGCATGGCCACAGCCACCT...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAAGGTGGCTGTGGCCATaGACTCCTTTGGACGTGTCC +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPRWLWP*TPLDVS
Trigger: GGACACGTCCAAAGGAGTGCATGGCCACAGCCACCT...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCGAATTTCCAGAAAGCTaGAGGCTTGGCCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPIEFPES*RLGLHY
Trigger: GTAATGGAGGCCAAGCCTGCAGCTTTCTGGAAATTC...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCACTCCTTCTTGCTAAGTaGTGTGTGCCCGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPLLLAK*CVPEVP
Trigger: GGGGACCTCGGGCACACACCACTTAGCAAGAAGGAG...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGAGACCAGGGGAGCCTaGGGCCGGCCCACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RNACAFCARQRDGDTASGETRGA*GRPTVW
Trigger: CCACACAGTGGGCCGGCCCCAGGCTCCCCTGGTCTC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGCCCGCCTTCCTGCCATaGAGGGAGAATGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLPAFLP*RENGAQ
Trigger: CTGGGCCCCATTCTCCCTCCATGGCAGGAAGGCGGG...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGGGAACAGTCTGTGCTaGAGGGTGTGTACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGGNSLC*RVCTAP
Trigger: TGGGGCTGTACACACCCTCCAGCACAGACTGTTCCC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGCTGCCCCGGGCTCCCTaGCTGCCAGTCTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLLPRAP*LPVSEP
Trigger: TGGTTCAGAGACTGGCAGCCAGGGAGCCCGGGGCAG...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAATGTGCTTTTGAATGTTaGTCAGCCGGGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQCAFEC*SAGLGF
Trigger: AAAGCCCAGCCCGGCTGACCAACATTCAAAAGCACA...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCTTCTCCATCCCCAGATaGAGGGGACAGCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTFSIPR*RGQPSR
Trigger: TCTGCTTGGCTGTCCCCTCCATCTGGGGATGGAGAA...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGCATCTCTCTCCTCCTaGGGGTTTCTGCTGACCACC +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGASLSS*GFLLTT
Trigger: GGTGGTCAGCAGAAACCCCCAGGAGGAGAGAGATGC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGAGTCAGCCTGGAGCCTaGAGCCAGGCGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGSQPGA*SQASMQ
Trigger: CTGCATGGACGCCTGGCTCCAGGCTCCAGGCTGACT...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCAGAGTGACACCAGCTaGGAGGGCTGGGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLQSDTS*EGWAAG
Trigger: ACCCGCTGCCCAGCCCTCCCAGCTGGTGTCACTCTG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCACCCTCCCAGGCCGTaGCCAAGGGAGACGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLHPPRP*PRETLL
Trigger: CAGAAGCGTCTCCCTTGGCCACGGCCTGGGAGGGTG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAATGGACGTGTCCTAGATaGCATTCTCAAACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQWTCPR*HSQTAA
Trigger: TGCAGCTGTTTGAGAATGTCATCTAGGACACGTCCA...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCTGGCTGCCAGTCTCTaGACCACGTTCCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLLAASL*TTFLPG
Trigger: TCCCGGGAGGAACGTGGTTCAGAGACTGGCAGCCAG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGGCCTTAGAGGCAGAGTaGCACCAGCTGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLALEAE*HQLGGL
Trigger: CAGCCCTCCCAGCTGGTGTCACTCTGCCTCTAAGGC...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAACTTCCTTAGCCGGCTaGATCCTGGGCGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGTSLAG*ILGAEE
Trigger: TTCTTCAGCGCCCAGGATGCAGCCGGCTAAGGAAGT...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295225.10
CDS-3UTR GCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGCTTCTCGTGGACTGTaGCCCGCAGCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGASRGL*PAAGWR
Trigger: TCTCCATCCTGCTGCGGGGCACAGTCCACGAGAAGC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCAAGTTTCTTGGAGGCTaGTCCTGGCAGGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTKFLGG*SWQDGG
Trigger: ACCTCCATCCTGCCAGGAGCAGCCTCCAAGAAACTT...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCCCGGGCTCCCTGGCTaGCAGTCTCTGAACCACGTT +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLPGLPG*QSLNHV
Trigger: AACGTGGTTCAGAGACTGGCAGCCAGGGAGCCCGGG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCTTCCTGGAGGGGCCATaGGGCCTGGGACCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCFLEGP*GLGPGS
Trigger: GGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGGAA...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTTGGCCTCCGCCATACTaGCTTTCCTCTGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSWPPPY*LSSEGP
Trigger: AGGGCCCTCAGAGGAAAGGCAGTATGGCGGAGGCCA...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGAGACGCTTCTGCCATaGAGACATGCGGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGETLLP*RHAAGL
Trigger: CAGACCGGCCGCATGTCTGCATGGCAGAAGCGTCTC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGGCTGGTGGCGCACCGTaGACAGCTCCAGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLAGGAP*TAPAHC
Trigger: ACAGTGAGCTGGAGCTGTCCACGGTGCGCCACCAGC...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCTGGTCCAGCCCCTCTaGCTGGTGGCGCACCGTGGA +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCLVQPL*LVAHRG
Trigger: TCCACGGTGCGCCACCAGCCAGAGGGGCTGGACCAG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGGAAGTGTGCATAGGTaGTGGCATCTCCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGGSVHR*WHLPEG
Trigger: TCCCTCAGGGAGATGCCACCACCTATGCACACTTCC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGACGTCCTCCCGCAGGATaGGGTAGGTGTGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RNACAFCARQRDGDTASGRPPAG*GRCGGP
Trigger: TGGGCCGCCACACCTACCCCATCCTGCGGGAGGACG...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCGCTGGCTGGGGCTCCTaGACTCGGCCCCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFAGWGS*TRPLAR
Trigger: TCTGGCTAGGGGCCGAGTCCAGGAGCCCCAGCCAGC...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGAGGCTTGCCCCACAGTaGGTGGCCTGGTACCCAGCT +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLRLAPQ*VAWYPA
Trigger: AGCTGGGTACCAGGCCACCCACTGTGGGGCAAGCCT...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTCCCACCCTGTGGAGCTaGCAGAGAGTGCCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSPTLWS*QRVPSD
Trigger: ATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGG...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGGCCAGCAGGAGGGCCTaGCCTCCGAGAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWASRRA*PPRSSV
Trigger: CACACTGCTTCTCGGAGGCCAGGCCCTCCTGCTGGC...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCCAGGGCCACCATATTaGGGCTACTGGGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLPGPPY*GYWAQA
Trigger: GGCTTGGGCCCAGTAGCCCCAATATGGTGGCCCTGG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCAGGGGCCATGCGGCCTaGGACCGGGTTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCRGHAA*DRVPSG
Trigger: CCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCT...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGCCGAGGGGCCCCCATaGCCTCCGCCATACTGCCTT +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCAEGPP*PPPYCL
Trigger: AAGGCAGTATGGCGGAGGCCATGGGGGCCCCTCGGC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGAGTCAGCCTGGAGCCTaGAGCCAGGCGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLSQPGA*SQASMQ
Trigger: CTGCATGGACGCCTGGCTCCAGGCTCCAGGCTGACT...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGCAGAGTGACACCAGCTaGGAGGGCTGGGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWQSDTS*EGWAAG
Trigger: ACCCGCTGCCCAGCCCTCCCAGCTGGTGTCACTCTG...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCAGACCCCTCCTGGTTaGGCTGTGCAGCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLQTPPG*AVQPVW
Trigger: CCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTCTGCATCCTGGGCGCTaGAGAAAACTGTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSLHPGR*RKLLPA
Trigger: GGCTGGCAACAGTTTTCTTCAGCGCCCAGGATGCAG...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295225.10
CDS-3UTR TCA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGACAGGGTTTGTGCTTTTaGATGTTGGTCAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGQGLCF*MLVSRA
Trigger: AGCCCGGCTGACCAACATTCAAAAGCACAAACCCTG...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGTCCCCCAGGAGGCTaGCGTCCGACGCCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCGPPGG*RPTPLS
Trigger: TGACAAAGGCGTCGGACGGCAGCCTCCTGGGGGACC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGGAGCTGGCAGAGAGTaGCCTCAGATTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGGAGRE*PQILHH
Trigger: GTGGTGGAGAATCTGAGGGCACTCTCTGCCAGCTCC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGGAGGGAACAGTCTGTaGTGGAGGGTGTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGGGNSL*WRVCTA
Trigger: GGCTGTACACACCCTCCAGCACAGACTGTTCCCTCC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGCTAAGGAATGCTTGTaGTTTTTGTGCAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQAKECL*FLCKAE
Trigger: CTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGTCTGCCATGCAGACATaGGGCCGGTCTGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLSAMQT*GRSVSQ
Trigger: CTGGGACACAGACCGGCCGCATGTCTGCATGGCAGA...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGCAAGGGAGACGCTTCTaGCATGCAGACATGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLQGRRF*HADMRP
Trigger: CGGCCGCATGTCTGCATGGCAGAAGCGTCTCCCTTG...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCAAGGGAGACGCTTCTaGCATGCAGACATGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLQGRRF*HADMRP
Trigger: CGGCCGCATGTCTGCATGGCAGAAGCGTCTCCCTTG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGAGTCCTCAAAGTGGATaGCCCCGTTCCCGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGSPQSG*PRSRPH
Trigger: ATGCGGACGGGAACGGGGCCATCCACTTTGAGGACT...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCACTTGAGCTTCTCGTaGACTGTGCCCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLHLSFS*TVPRSR
Trigger: CCTGCTGCGGGGCACAGTCCACGAGAAGCTCAAGTG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTCTGCTCCTGGCAGGATaGAGGTTTCTTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSLLLAG*RFLGGG
Trigger: TCCACCCCCAAGAAACCTCCATCCTGCCAGGAGCAG...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGCTCACACCGGAGATTaGACCCTCCCCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCAHTGD*TLPCRG
Trigger: GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCCACAGTGGGTGGCCTaGTACCCAGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLPQWVA*YPALPG
Trigger: ACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGACCCGCCTTCCTGCCATaGAGGGAGAATGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RNACAFCARQRDGDTASGPAFLP*RENGAQ
Trigger: CTGGGCCCCATTCTCCCTCCATGGCAGGAAGGCGGG...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGATGTGGGAATGTTCCTaGAGGGGCCATGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLMWECS*RGHAAW
Trigger: CCAGGCCGCATGGCCCCTCCAGGAACATTCCCACAT...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCTGGGGCTAGCCTCTTaGGGCACACGGGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRLGLAS*GTRGLP
Trigger: GGGGAGTCCCCGTGTGCCCCAAGAGGCTAGCCCCAG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGAAGCTGATGCCCTCCTaGAGGCAGAGGCCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWKLMPS*RQRPPV
Trigger: GACTGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTT...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCGGGTTCCTTCTGGGTaGGGCCCCAATCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRRVPSG*GPNQAG
Trigger: TCCCGCCTGATTGGGGCCTCACCCAGAAGGAACCCG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGGTGGTGATGCTCTCCTaGGGCCTTGGCCTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWVVMLS*GLGLRG
Trigger: GCCTCTAAGGCCAAGGCCTCAGGAGAGCATCACCAC...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGTTGCTAAGTGGTGTGTaGCCGAGGTCCCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWLLSGV*PRSPRR
Trigger: CCTCCTGGGGGACCTCGGGCACACACCACTTAGCAA...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGCTGAGCCTCGGCCTCTaGCACTTGATACCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLLSLGL*HLIPSF
Trigger: GAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAG...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTTACAGCCCCACCCACTaGATTCCCACTGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSYSPTH*IPTEPG
Trigger: TCCTGGTTCAGTGGGAATGCAGTGGGTGGGGCTGTA...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCCCCGGGCTCCCTGGCTaGCAGTCTCTGAACCACGTT +
Preference number: 4 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFPGLPG*QSLNHV
Trigger: AACGTGGTTCAGAGACTGGCAGCCAGGGAGCCCGGG...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGACTCCTGGTTGGGCTGTaGAGCCAGTCTGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RNACAFCARQRDGDTASGLLVGL*SQSGPK
Trigger: CTTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAG...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGTGCCCCGCAGCAGGATaGAGAGGCCAACCACAAAGT +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLCPAAG*RGQPQS
Trigger: ACTTTGTGGTTGGCCTCTCCATCCTGCTGCGGGGCA...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGGGGTGGAGGTGGCTGTaGCCATGCACTCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWGWRWL*PCTPLD
Trigger: GTCCAAAGGAGTGCATGGCCACAGCCACCTCCACCC...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGCTTGGAGGCTGCTCCTaGCAGGATGGAGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGLGGCS*QDGGFL
Trigger: CAAGAAACCTCCATCCTGCCAGGAGCAGCCTCCAAG...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGACATCCAGCAGCTGGTaGCCTGCAGACCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLTSSSW*PADLLC
Trigger: ACAGAGCAGGTCTGCAGGCCACCAGCTGCTGGATGT...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGGGCCGGCCCACTGTGTaGCAAGAAAGCAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLGRPTV*QESRME
Trigger: CTCCATTCTGCTTTCTTGCCACACAGTGGGCCGGCC...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCGAGAATGGGGCCCAGTaGCCCCTCACCACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFENGAQ*PLTTQA
Trigger: AGCCTGAGTGGTGAGGGGCCACTGGGCCCCATTCTC...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCCCACTGCATTCCCACTaGACCAGGACTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFPLHSH*TRTGAR
Trigger: CCTTGCCCCAGTCCTGGTTCAGTGGGAATGCAGTGG...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGGAGCTGGGCTGGCTGTaGTGGAATGTATTATGTGGG +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGELGWL*WNVLCG
Trigger: CCCACATAATACATTCCATCACAGCCAGCCCAGCTC...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGTGGTGATGCTCTCCTaGGGCCTTGGCCTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RNACAFCARQRDGDTASGVVMLS*GLGLRG
Trigger: GCCTCTAAGGCCAAGGCCTCAGGAGAGCATCACCAC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGCAGGGGTGTGGTGGTaGTGCTCTCCTGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRAGVWW*CSPEAL
Trigger: CAAGGCCTCAGGAGAGCATCACCACCACACCCCTGC...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGCTTCTCGTGGACTGTaGCCCGCAGCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCASRGL*PAAGWR
Trigger: TCTCCATCCTGCTGCGGGGCACAGTCCACGAGAAGC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCTCACCACTCAGGCTTaGCCCACAGTGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRLTTQA*PTVGGL
Trigger: CAGGCCACCCACTGTGGGGCAAGCCTGAGTGGTGAG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGTACAGCCCCACCCACTaGATTCCCACTGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLYSPTH*IPTEPG
Trigger: TCCTGGTTCAGTGGGAATGCAGTGGGTGGGGCTGTA...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGAGGGACGGCGACACTaGTTCAGGAGAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWREGRRH*FRRGGS
Trigger: TGAGCCCCCTCTCCTGAAGCAGTGTCGCCGTCCCTC...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGGGAAGTGTGCATAGGTaGTGGCATCTCCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLGSVHR*WHLPEG
Trigger: TCCCTCAGGGAGATGCCACCACCTATGCACACTTCC...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGGGCCGGCCCACTGTGTaGCAAGAAAGCAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWGRPTV*QESRME
Trigger: CTCCATTCTGCTTTCTTGCCACACAGTGGGCCGGCC...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGTAGTGGGCAGAGAGTaGCTACGGGGAGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: RNACAFCARQRDGDTASGVVGRE*LRGGDQ
Trigger: CTGGTCTCCTCCCCGTAGCCACTCTCTGCCCACTAC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCAAGCTGCTGGGCCATaGGAGGGGCACTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCQAAGP*EGHYRK
Trigger: CTTCCTGTAGTGCCCCTCCCATGGCCCAGCAGCTTG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGAAGCTGATGCCCTCCTaGAGGCAGAGGCCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRKLMPS*RQRPPV
Trigger: GACTGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTT...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp TGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGCCTGGGACCGGGATGTTCTCATCCTTCTaGCAGGCCTCCAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: WNVLCGNVPGGAMRPGTGMFSSF*QASRNS
Trigger: AGAGTTCCTGGAGGCCTGTCAGAAGGATGAGAACAT...CCCGGTCCCAGGCCGCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCCACTGCATTCCCACTaGACCAGGACTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRPLHSH*TRTGAR
Trigger: CCTTGCCCCAGTCCTGGTTCAGTGGGAATGCAGTGG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGGAGCTGGGCTGGCTGTaGTGGAATGTATTATGTGGG +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLELGWL*WNVLCG
Trigger: CCCACATAATACATTCCATCACAGCCAGCCCAGCTC...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp CAAGGAGAGGCTCATCCCACCCTGTGGAGCTGGCAGAGAGTGCCCTCAGATTCTGCTGAAGAAAACTGTTaGCAGCCTCCCCACTTCACA +
Preference number: 4 (lower is better)
Translates to: QGEAHPTLWSWQRVPSDSAEENC*QPPHFT
Trigger: TGTGAAGTGGGGAGGCTGGCAACAGTTTTCTTCAGC...AGAATCTGAGGGCACTCTCTGCCAGCTCCACAGGGTGGGATGAGCCTCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295225.10
CDS-3UTR GCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGTTGCTAAGTGGTGTGTaGCCGAGGTCCCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRLLSGV*PRSPRR
Trigger: CCTCCTGGGGGACCTCGGGCACACACCACTTAGCAA...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCCAGCTCACTGTCGCTaGTATCTGAGCCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRPAHCR*YLSPVG
Trigger: CCCCACAGGGCTCAGATAGCAGCGACAGTGAGCTGG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGAATCCCCCGCCTTCCTaGCATGGAGGGAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRNPPPS*HGGRMG
Trigger: CCCCATTCTCCCTCCATGGCAGGAAGGCGGGGGATT...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGAGCTGGCAGAGAGTaGCCTCAGATTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCGAGRE*PQILHH
Trigger: GTGGTGGAGAATCTGAGGGCACTCTCTGCCAGCTCC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGTGGCCTCCGCCATACTaGCTTTCCTCTGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRWPPPY*LSSEGP
Trigger: AGGGCCCTCAGAGGAAAGGCAGTATGGCGGAGGCCA...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCATCTCATCAAAGCCTaGCGGCTGAGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRHLIKA*RLSLGL
Trigger: GAGGCCGAGGCTCAGCCGCCAGGCTTTGATGAGATG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGAGTGTGCATAGGTGGTaGCATCTCCCTGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLSVHRW*HLPEGR
Trigger: TCTTCCCTCAGGGAGATGCCACCACCTATGCACACT...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGAGAAAGCTGCAGGCTTaGCCTCCATTACCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWRKLQA*PPLPPL
Trigger: GAGAGGGGGTAATGGAGGCCAAGCCTGCAGCTTTCT...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCCCACTGAACCAGGACTaGGGCAAGGAGAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFPLNQD*GKERLI
Trigger: GATGAGCCTCTCCTTGCCCCAGTCCTGGTTCAGTGG...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGACCACTGAACCAGGACTaGGGCAAGGAGAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: RNACAFCARQRDGDTASGPLNQD*GKERLI
Trigger: GATGAGCCTCTCCTTGCCCCAGTCCTGGTTCAGTGG...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGGGAACAGTCTGTGCTaGAGGGTGTGTACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCGNSLC*RVCTAP
Trigger: TGGGGCTGTACACACCCTCCAGCACAGACTGTTCCC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGTTCTCCATCCCCAGATaGAGGGGACAGCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWFSIPR*RGQPSR
Trigger: TCTGCTTGGCTGTCCCCTCCATCTGGGGATGGAGAA...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGATGTGGGAATGTTCCTaGAGGGGCCATGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRMWECS*RGHAAW
Trigger: CCAGGCCGCATGGCCCCTCCAGGAACATTCCCACAT...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
3UTR CAA 72 bp GCCCTCAGATTCTCCACCACGACCCAATCCCTAAACTaGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ALRFSTTTQSLN*KSPAFLPWREN
Trigger: ATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTCGTGGTGGAGAATCTGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGATGTTCTCATCCTTCTaGCAGGCCTCCAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLMFSSF*QASRNS
Trigger: AGAGTTCCTGGAGGCCTGTCAGAAGGATGAGAACAT...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCCAGGAACTCTTCAATaGTCACTACCCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLPGTLQ*SLPHPG
Trigger: ACCAGGATGGGGTAGTGACCATTGAAGAGTTCCTGG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCGGCAAGAAAGCAGAATaGAGAACGGGACGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFGKKAE*RTGRGG
Trigger: CCCACCTCGTCCCGTTCTCCATTCTGCTTTCTTGCC...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCCGCATCAAAGGCGTTaGAGAGGAAGTGTGCATAGG +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCPHQRR*RGSVHR
Trigger: CCTATGCACACTTCCTCTTCAACGCCTTTGATGCGG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCTCTGCCAGCCCAGATaGATGGCTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRLCQPR*MAVCVC
Trigger: ACACACACACACAGCCATTCATCTGGGCTGGCAGAG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGATGCTTGTGCTTTTTGTaGAAGGCAGAGGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: RNACAFCARQRDGDTASGCLCFL*KAEGRR
Trigger: TCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCA...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCTGCTTGTGCTTTTTGTaGAAGGCAGAGGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCCLCFL*KAEGRR
Trigger: TCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCA...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCGTCACTACCCCATCCTaGTTCCGGTCCATTTTCTCG +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCVTTPS*FRSIFS
Trigger: CGAGAAAATGGACCGGAACCAGGATGGGGTAGTGAC...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGTCACTACCCCATCCTaGTTCCGGTCCATTTTCTCG +
Preference number: 4 (lower is better)
Translates to: RNACAFCARQRDGDTASGVTTPS*FRSIFS
Trigger: CGAGAAAATGGACCGGAACCAGGATGGGGTAGTGAC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGCCAGGAACTCTTCAATaGTCACTACCCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWPGTLQ*SLPHPG
Trigger: ACCAGGATGGGGTAGTGACCATTGAAGAGTTCCTGG...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGAGTAGCAGGGGATCCTaGGACCCCCAGGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRSSRGS*DPQGRI
Trigger: AATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACT...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGAGTGTGCATAGGTGGTaGCATCTCCCTGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWRSVHRW*HLPEGR
Trigger: TCTTCCCTCAGGGAGATGCCACCACCTATGCACACT...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCTGTGCTTTTGAATGTTaGTCAGCCGGGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCCAFEC*SAGLGF
Trigger: AAAGCCCAGCCCGGCTGACCAACATTCAAAAGCACA...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR TCA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCTGGACGTGTCCTAGATaGCATTCTCAAACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCWTCPR*HSQTAA
Trigger: TGCAGCTGTTTGAGAATGTCATCTAGGACACGTCCA...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGAATTTCCAGAAAGCTaGAGGCTTGGCCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: SGAGLAVMECIMWECSWREFPES*RLGLHY
Trigger: GTAATGGAGGCCAAGCCTGCAGCTTTCTGGAAATTC...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR GCA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCGCTAAGGAATGCTTGTaGTTTTTGTGCAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFAKECL*FLCKAE
Trigger: CTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCGGCTCACACCGGAGATaGGACCCTCCCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPGSHRR*DPPLQG
Trigger: CCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCC...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCCCTCACCACTCAGGCTaGCCCCACAGTGGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPIPHHSG*PHSGWP
Trigger: AGGCCACCCACTGTGGGGCAAGCCTGAGTGGTGAGG...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCCCAGGGCCACCATATaGGGGCTACTGGGCCCAAGC +
Preference number: 5 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPPRATI*GLLGPS
Trigger: GCTTGGGCCCAGTAGCCCCAATATGGTGGCCCTGGG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS CCA 90 bp TCTGGGCCTGCAGCTGGTCCAGCCCCTCTGGCTGGTGGCGCACCGTaGACAGCTCCAGCTCACTGTCGCTGCTATCTGAGCCCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: SGPAAGPAPLAGGAP*TAPAHCRCYLSPVG
Trigger: CCCCACAGGGCTCAGATAGCAGCGACAGTGAGCTGGAGCTGTCCACGGTGCGCCACCAGCCAGAGGGGCTGGACCAGCTGCAGGCCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp CAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCAAGCAGACCCCTCCTGGTaGGGCTGTGCAGCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: QRGRQTPPGWAVQPVWPQADPSW*GCAASL
Trigger: CAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGC...TTGGGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS GCA 90 bp GAGAGGCCAGGTGGCCCACGGAGCAGCGTCCCACTCCTTGCCCCATaGCCAGCATGGCACAGCTTCGTCTTGAGGAGGCCCATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ERPGGPRSSVPLLAP*PAWHSFVLRRPIWL
Trigger: CAGCCAGATGGGCCTCCTCAAGACGAAGCTGTGCCATGCTGGGCATGGGGCAAGGAGTGGGACGCTGCTCCGTGGGCCACCTGGCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS CCA 90 bp GAAGCTGTGCCCGTCAGAGTGGACCTGAGCCGCCAGCACATGCGATaGCCACCGTGCTCTCGCCCCCACCCTAAGGGAGAGCAGGCGCAT +
Preference number: 5 (lower is better)
Translates to: EAVPVRVDLSRQHMR*PPCSRPHPKGEQAH
Trigger: ATGCGCCTGCTCTCCCTTAGGGTGGGGGCGAGAGCACGGTGGCCATCGCATGTGCTGGCGGCTCAGGTCCACTCTGACGGGCACAGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS-3UTR CAA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCCACTCGAGCCCCTTCTaGGTGACATCCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGHSSPF*VTSSSW
Trigger: CCAGCTGCTGGATGTCACCAAGAAGGGGCTCGAGTG...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp GAGAACGGGACGAGGTGGGCTCACACCGGAGATTGGACCCTCCCCTGCAGGGGCTCTCAGCCCTCACCATaGGCTCCAGCTTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ENGTRWAHTGDWTLPCRGSQPSP*APALGW
Trigger: CCAGCCCAAAGCTGGAGCCAATGGTGAGGGCTGAGA...GCCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCCCACCTCGTCCCGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS TCA 90 bp TCTGCACACCGCGCAGCACTTCACACGTGCACAAAGCCCTCAGTGTaGCCACACCAGCCCGGCCTCCTTGCGGGACACACACGGGACGTG +
Preference number: 5 (lower is better)
Translates to: SAHRAALHTCTKPSV*PHQPGLLAGHTRDV
Trigger: CACGTCCCGTGTGTGTCCCGCAAGGAGGCCGGGCTGGTGTGGTCACACTGAGGGCTTTGTGCACGTGTGAAGTGCTGCGCGGTGTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 90 bp CCCAGAATTGGCCACCCAGGGCCCAGCCACAGATGCTCTAGCCCTTaGCCACTGTCTCCAGGACCCTGGGTCCTGTCCACTCCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: PRIGHPGPSHRCSSP*PLSPGPWVLSTPCR
Trigger: TCGGCAAGGAGTGGACAGGACCCAGGGTCCTGGAGACAGTGGGCAAGGGCTAGAGCATCTGTGGCTGGGCCCTGGGTGGCCAATTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp GCTGAGCCTCGGCCTCTGCCACTTGATACCCTCCTTCTTGCTAAGTaGTGTGTGCCCGAGGTCCCCCAGGAGGCTGCCGTCCGACGCCTT +
Preference number: 5 (lower is better)
Translates to: AEPRPLPLDTLLLAK*CVPEVPQEAAVRRL
Trigger: AAGGCGTCGGACGGCAGCCTCCTGGGGGACCTCGGGCACACACCACTTAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS CCA 90 bp TCTGGGCCTGCAGCTGGTCCAGCCCCTCTGGCTGGTGGCGCACCGTaGACAGCTCCAGCTCACTGTCGCTGCTATACATGCAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SGPAAGPAPLAGGAP*TAPAHCRCYTCSLH
Trigger: GTGGAGACTGCATGTATAGCAGCGACAGTGAGCTGGAGCTGTCCACGGTGCGCCACCAGCCAGAGGGGCTGGACCAGCTGCAGGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377181.2
CDS CCA 90 bp GGTGGCCCACGGAGCAGCGTCCCACTCCTTGCCCCATGCCCAGCATaGCACAGCTTCGTCTTGAGGAGGCCCATCTGGCTGAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: GGPRSSVPLLAPCPA*HSFVLRRPIWLRRW
Trigger: CCATCTTCTCAGCCAGATGGGCCTCCTCAAGACGAAGCTGTGCCATGCTGGGCATGGGGCAAGGAGTGGGACGCTGCTCCGTGGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS CCA 90 bp GAGAGGAGACCCGGGAGCTATGGCCAAGGGAGACAAAGGGCACATTaGAGTCCCGGCTCCTCTGTCCGTGAGGTCCCTGGGCTCCCTCGT +
Preference number: 5 (lower is better)
Translates to: ERRPGSYGQGRQRAH*SPGSSVREVPGLPR
Trigger: ACGAGGGAGCCCAGGGACCTCACGGACAGAGGAGCCGGGACTCCAATGTGCCCTTTGTCTCCCTTGGCCATAGCTCCCGGGTCTCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS-3UTR CAA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCCTGGACAGGATCCACTaGACCAGGCAGCATCTCATC +
Preference number: 5 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPILDRIH*TRQHLI
Trigger: GATGAGATGCTGCCTGGTCAAGTGGATCCTGTCCAG...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCCCAGGGTTTGTGCTTTaGAATGTTGGTCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPPGFVL*NVGQPG
Trigger: GCCCGGCTGACCAACATTCAAAAGCACAAACCCTGG...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCTGCCGTCCGACGCCTTaGTCACTTCCTTCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTCRPTP*SLPSGA
Trigger: AGCCCCGGAAGGAAGTGACAAAGGCGTCGGACGGCA...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360990.7
CDS GCA 90 bp CCCGTCAGAGTGGACCTGAGCCGCCAGCACATGCGATGGCCACCGTaGTCTCGCCCCCACCCTAAGGGAGAGCAGGCGCATTTTCATTCT +
Preference number: 5 (lower is better)
Translates to: PVRVDLSRQHMRWPP*SRPHPKGEQAHFHS
Trigger: AGAATGAAAATGCGCCTGCTCTCCCTTAGGGTGGGGGCGAGAGCACGGTGGCCATCGCATGTGCTGGCGGCTCAGGTCCACTCTGACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 90 bp AGGCTCAGGACACCGTGCTGGGCCTCGCAGAGCACACAGTGGGGCTaGACTGAATGGGCCCCATTGTTCTTTGCACCCAGAGCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: RLRTPCWASQSTQWG*TEWAPLFFAPRACA
Trigger: GGCACAGGCTCTGGGTGCAAAGAACAATGGGGCCCATTCAGTGCAGCCCCACTGTGTGCTCTGCGAGGCCCAGCACGGTGTCCTGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp TCTGGGCCTGCAGCTGGTCCAGCCCCTCTGGCTGGTGGCGCACCGTaGACAGCTCCAGCTCACTGTCGCTGCTATCTTCCATGGATATGG +
Preference number: 5 (lower is better)
Translates to: SGPAAGPAPLAGGAP*TAPAHCRCYLPWIW
Trigger: CCATATCCATGGAAGATAGCAGCGACAGTGAGCTGGAGCTGTCCACGGTGCGCCACCAGCCAGAGGGGCTGGACCAGCTGCAGGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468529.1
CDS CCA 90 bp ACCCCAAGGCTCAGGACACCGTGCTGGGCCTCGCAGAGCACACAGTaGGGCTGCACTGAATGGGCCCCATTGTTCTTTGCACCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: TPRLRTPCWASQSTQ*GCTEWAPLFFAPRA
Trigger: GGCTCTGGGTGCAAAGAACAATGGGGCCCATTCAGTGCAGCCCCACTGTGTGCTCTGCGAGGCCCAGCACGGTGTCCTGAGCCTTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp CTGCCAGAGTGGTCCAGGATGCCAGGCATCTCCCAAGGCGCTAGGTaGGGCCCTGGCTTCGTCCCATTCAGACCTCGTTCTCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LPEWSRMPGISQGAR*GPGFVPFRPRSLVL
Trigger: GAGGACCAGAGAACGAGGTCTGAATGGGACGAAGCCAGGGCCCCACCTAGCGCCTTGGGAGATGCCTGGCATCCTGGACCACTCTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS-3UTR CAA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCTCTCAGCCCTCACCATaGGCTCCAGCTTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTSQPSP*APALGW
Trigger: CCAGCCCAAAGCTGGAGCCAATGGTGAGGGCTGAGA...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS GCA 90 bp CTCGGCCTCTGCCACTTGATACCCTCCTTCTTGCTAAGTGGTGTGTaGCCGAGGTCCCCCAGGAGGCTGCCGTCCGACGCCTTTGTCACT +
Preference number: 5 (lower is better)
Translates to: LGLCHLIPSFLLSGV*PRSPRRLPSDAFVT
Trigger: AGTGACAAAGGCGTCGGACGGCAGCCTCCTGGGGGACCTCGGGCACACACCACTTAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS GCA 90 bp CACGTGCACAAAGCCCTCAGTGTGACCACACCAGCCCGGCCTCCTTaGGGGACACACACGGGACGTGTTTGGACTGAAGAGAGGAGACCC +
Preference number: 5 (lower is better)
Translates to: HVHKALSVTTPARPP*GTHTGRVWTEERRP
Trigger: GGGTCTCCTCTCTTCAGTCCAAACACGTCCCGTGTGTGTCCCGCAAGGAGGCCGGGCTGGTGTGGTCACACTGAGGGCTTTGTGCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp GACGGGGATCTGGTGCGTAGCAGCCAGTCCCTTTGTGCACAGGCATaGACCTCTGGCTGTGGCTGTCAGCCACTGTGCCTGCTGTTTGCC +
Preference number: 5 (lower is better)
Translates to: DGDLVRSSQSLCAQA*TSGCGCQPLCLLFA
Trigger: GGCAAACAGCAGGCACAGTGGCTGACAGCCACAGCCAGAGGTCCATGCCTGTGCACAAAGGGACTGGCTGCTACGCACCAGATCCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp ACCACACCAGCCCGGCCTCCTTGCGGGACACACACGGGACGTGTTTaGACTGAAGAGAGGAGACCCGGGAGCTATGGCCAAGGGAGACAA +
Preference number: 5 (lower is better)
Translates to: TTPARPPCGTHTGRV*TEERRPGSYGQGRQ
Trigger: TTGTCTCCCTTGGCCATAGCTCCCGGGTCTCCTCTCTTCAGTCCAAACACGTCCCGTGTGTGTCCCGCAAGGAGGCCGGGCTGGTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp ACACCGTGCTGGGCCTCGCAGAGCACACAGTGGGGCTGCACTGAATaGGCCCCATTGTTCTTTGCACCCAGAGCCTGTGCCAGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: TPCWASQSTQWGCTE*APLFFAPRACASSQ
Trigger: TTGGGAGCTGGCACAGGCTCTGGGTGCAAAGAACAATGGGGCCCATTCAGTGCAGCCCCACTGTGTGCTCTGCGAGGCCCAGCACGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp CCCAGCCACAGATGCTCTAGCCCTTGCCCACTGTCTCCAGGACCCTaGGTCCTGTCCACTCCTTGCCGACGTTCTACCTCACCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: PSHRCSSPCPLSPGP*VLSTPCRRSTSPKP
Trigger: AGGCTTGGGTGAGGTAGAACGTCGGCAAGGAGTGGACAGGACCCAGGGTCCTGGAGACAGTGGGCAAGGGCTAGAGCATCTGTGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp GCGCTAGGTGGGGCCCTGGCTTCGTCCCATTCAGACCTCGTTCTCTaGTCCTCCGGAGTTTCTGTGAACTTCCTGAGGCCTGGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: ALGGALASSHSDLVL*SSGVSVNFLRPGAH
Trigger: GTGGGCTCCAGGCCTCAGGAAGTTCACAGAAACTCCGGAGGACCAGAGAACGAGGTCTGAATGGGACGAAGCCAGGGCCCCACCTAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp CCAGTCTGGCAGGGGCAGGAGTGGCCAAGCTCCCAGAGTGACCTTTaGCAGTTAAGGCCCGCAGAGGAAAGGCAAAGGAGGGGAGGACTG +
Preference number: 5 (lower is better)
Translates to: PVWQGQEWPSSQSDL*QLRPAEERQRRGGL
Trigger: CAGTCCTCCCCTCCTTTGCCTTTCCTCTGCGGGCCTTAACTGCCAAAGGTCACTCTGGGAGCTTGGCCACTCCTGCCCCTGCCAGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS-3UTR CAA 90 bp CCTGGAGGGGCCATGCGGCCTGGGACCGGGTTCCTTCTGGGTGAGGCCCCAATCAGATTAAAGGCCCACTaGAGCTTCTCGTGGACTGTG +
Preference number: 5 (lower is better)
Translates to: PGGAMRPGTGFLLGEAPIRLKAH*SFSWTV
Trigger: CACAGTCCACGAGAAGCTCAAGTGGGCCTTTAATCT...GATTGGGGCCTCACCCAGAAGGAACCCGGTCCCAGGCCGCATGGCCCCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGGGCTCACACCGGAGATaGGACCCTCCCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLGSHRR*DPPLQG
Trigger: CCCCTGCAGGGGAGGGTCCAATCTCCGGTGTGAGCC...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS CCA 90 bp GAACCAGATGTAAGTGCAGGACTCAGGCCACCCACTCTGCCAGTCTaGCAGGGGCAGGAGTGGCCAAGCTCCCAGAGTGACCTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: EPDVSAGLRPPTLPV*QGQEWPSSQSDLWQ
Trigger: CTGCCAAAGGTCACTCTGGGAGCTTGGCCACTCCTGCCCCTGCCAGACTGGCAGAGTGGGTGGCCTGAGTCCTGCACTTACATCTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS-3UTR CAA 90 bp GGCCCCAATCAGGCGGGAGCAGCATCTCTCTCCTCCTGGGGGTTTCTGCTGACCCTCGGCCTCTGCCACTaGATACCCTCCTTCTTGCTA +
Preference number: 5 (lower is better)
Translates to: GPNQAGAASLSSWGFLLTLGLCH*IPSFLL
Trigger: TAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAG...GGTCAGCAGAAACCCCCAGGAGGAGAGAGATGCTGCTCCCGCCTGATTGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp CAGTGGAGTAGCAGGGGATCCTGGGACCCCCAGGGAAGAATTTCCAGAAAGCTGCCTCACCACTCAGGCTaGCCCCACAGTGGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: QWSSRGSWDPQGRISRKLPHHSG*PHSGWP
Trigger: AGGCCACCCACTGTGGGGCAAGCCTGAGTGGTGAGG...CAGCTTTCTGGAAATTCTTCCCTGGGGGTCCCAGGATCCCCTGCTACTCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp TCCCAGCGTGGGAGGCAGACCCCTCCTGGTTGGGCTGTGCAGCCAGTCTGGCCCGCTGCTAAGGAATGCTaGTGCTTTTTGTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SQRGRQTPPGWAVQPVWPAAKEC*CFLCKA
Trigger: TGCCTTGCACAAAAAGCACAAGCATTCCTTAGCAGC...GGGCCAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGCCTCCCACGCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp CAGCCAAGCAGAGTCCCCAGGGTTTGTGCTTTTGAATGTTGGTCAGCCGGGCTGGCAGACCCCTCCTGGTaGGGCTGTGCAGCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: QPSRVPRVCAFECWSAGLADPSW*GCAASL
Trigger: CAGACTGGCTGCACAGCCCAACCAGGAGGGGTCTGC...CAGCCCGGCTGACCAACATTCAAAAGCACAAACCCTGGGGACTCTGCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS TCA 90 bp CTGTGGATGCATTCAGGGCAGGTGTGCCGGTGTTCAGAAAGGTCCTaGCTCTGCCGCTCCCCGGCCCTCAGTTTCCTCGTCGATGAAACG +
Preference number: 5 (lower is better)
Translates to: LWMHSGQVCRCSERS*LCRSPALSFLVDET
Trigger: CGTTTCATCGACGAGGAAACTGAGGGCCGGGGAGCGGCAGAGTCAGGACCTTTCTGAACACCGGCACACCTGCCCTGAATGCATCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377181.2
CDS TCA 90 bp ACAGGTTCCAGCCTGGCTTCTCACGGAAGGCTTAGAAAGGATCAATaGGGTGCCCCGGCTTACTCAGGGCGTGAGCAGTGGGCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: TGSSLASHGRLRKDQ*GAPAYSGREQWAGW
Trigger: CCACCCTGCCCACTGCTCACGCCCTGAGTAAGCCGGGGCACCTCATTGATCCTTTCTAAGCCTTCCGTGAGAAGCCAGGCTGGAACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 90 bp ACCAGGCAGCATCTCATCAAAGCCTGGCGGCTGAGCCTCGGCCTCTaGCACTTGATACCCTCCTTCTTGCTAAGTGGTGTGTGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: TRQHLIKAWRLSLGL*HLIPSFLLSGVCPR
Trigger: CCTCGGGCACACACCACTTAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAGCCGCCAGGCTTTGATGAGATGCTGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS GCA 90 bp AGAGGCTGGGACACACACAACCATCTCCGGTGGTCCCCAAGGCCCTaGAGCTGTGGATGCATTCAGGGCAGGTGTGCCGGTGTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: RGWDTHNHLRWSPRP*SCGCIQGRCAGVQK
Trigger: TTTCTGAACACCGGCACACCTGCCCTGAATGCATCCACAGCTGCAGGGCCTTGGGGACCACCGGAGATGGTTGTGTGTGTCCCAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377181.2
CDS GCA 90 bp CTGTCGCTGCTATCTTCCATGGATATGGGCTCCAGGATGCCGAACTaGTTGAGGACGGCGATGAACAGCAGCACCACCACGGCCATGGCG +
Preference number: 5 (lower is better)
Translates to: LSLLSSMDMGSRMPN*LRTAMNSSTTTAMA
Trigger: CGCCATGGCCGTGGTGGTGCTGCTGTTCATCGCCGTCCTCAAGCAGTTCGGCATCCTGGAGCCCATATCCATGGAAGATAGCAGCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468529.1
CDS CCA 90 bp GACACCTGTCCTGTAAGAGGCTGGGACACACACAACCATCTCCGGTaGTCCCCAAGGCCCTGCAGCTGTGGATGCATTCAGGGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: DTCPVRGWDTHNHLR*SPRPCSCGCIQGRC
Trigger: ACACCTGCCCTGAATGCATCCACAGCTGCAGGGCCTTGGGGACCACCGGAGATGGTTGTGTGTGTCCCAGCCTCTTACAGGACAGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377181.2
CDS CCA 90 bp CTGCAGCCTGGCTCTGTCTTCCTAGCCAACTGGAAAACCGCAGTGTaGTCCCAGCTCTCTGTACCCATGCTCTGTGGGTCCCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: LQPGSVFLANWKTAV*SQLSVPMLCGSHWE
Trigger: CTCCCAGTGGGACCCACAGAGCATGGGTACAGAGAGCTGGGACCACACTGCGGTTTTCCAGTTGGCTAGGAAGACAGAGCCAGGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp CCCATCAAGCCTAGGAGGCTGGGACCCCGATCATGCCCATTCTCCTaGCCAGGGGACAAACGCTCCCTGGAAATCACACAGCTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PIKPRRLGPRSCPFS*PGDKRSLEITQLER
Trigger: CCTCTCTAGCTGTGTGATTTCCAGGGAGCGTTTGTCCCCTGGCCAGGAGAATGGGCATGATCGGGGTCCCAGCCTCCTAGGCTTGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp TCCATGCAGGGGAACAAACCCATCGCTGGTGCCCTGGCCCAGCCCTaGCCCTGTCTCCTGTGCGCCTTTGACAAGTTGTTCAGCAAACGT +
Preference number: 5 (lower is better)
Translates to: SMQGNKPIAGALAQP*PCLLCAFDKLFSKR
Trigger: ACGTTTGCTGAACAACTTGTCAAAGGCGCACAGGAGACAGGGCCAGGGCTGGGCCAGGGCACCAGCGATGGGTTTGTTCCCCTGCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp CCTCGTTCTCTGGTCCTCCGGAGTTTCTGTGAACTTCCTGAGGCCTaGAGCCCACCCTGTTTCGGTTGTCTGCAGCTGGGACCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: PRSLVLRSFCELPEA*SPPCFGCLQLGPQV
Trigger: AACCTGGGGTCCCAGCTGCAGACAACCGAAACAGGGTGGGCTCCAGGCCTCAGGAAGTTCACAGAAACTCCGGAGGACCAGAGAACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS-3UTR CAA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCACTCGGCCTCTGCCACTaGATACCCTCCTTCTTGCTA +
Preference number: 5 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPLGLCH*IPSFLL
Trigger: TAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAG...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAGGACCTAAGAGGACCTaGGAGGGAACAGTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGGPKRT*EGTVCA
Trigger: AGCACAGACTGTTCCCTCCAAGGTCCTCTTAGGTCC...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS TCA 90 bp AACCCTGGAAGACTGAAGTGGAGGAAATCTGAGTCTCGAGCGACCTaGAGCTGTGCCCGTCAGAGTGGACCTGAGCCGCCAGCACATGCG +
Preference number: 5 (lower is better)
Translates to: NPGRLKWRKSESRAT*SCARQSGPEPPAHA
Trigger: CGCATGTGCTGGCGGCTCAGGTCCACTCTGACGGGCACAGCTTCAGGTCGCTCGAGACTCAGATTTCCTCCACTTCAGTCTTCCAGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp GTGCTGGACAGGATCCACTTGACCAGGCAGCATCTCATCAAAGCCTaGCGGCTGAGCCTCGGCCTCTGCCACTTGATACCCTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VLDRIHLTRQHLIKA*RLSLGLCHLIPSFL
Trigger: CAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAGCCGCCAGGCTTTGATGAGATGCTGCCTGGTCAAGTGGATCCTGTCCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS-3UTR CAA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCATTGATACCCTCCTTCTaGCTAAGTGGTGTGTGCCCG +
Preference number: 5 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPLIPSF*LSGVCP
Trigger: CGGGCACACACCACTTAGCAAGAAGGAGGGTATCAA...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp AGAAGATCCCTGAGCCAGGGAAAGCTGATGCCCTCCTGGAGGCAGAGGCCCCCAGAATGCTTGTGCTTTTaGTGCAAGGCAGAGGGACGG +
Preference number: 5 (lower is better)
Translates to: RRSLSQGKLMPSWRQRPPECLCF*CKAEGR
Trigger: CCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTC...TGGGGGCCTCTGCCTCCAGGAGGGCATCAGCTTTCCCTGGCTCAGGGATCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGACCCAGGGCCACCATATaGGGGCTACTGGGCCCAAGC +
Preference number: 5 (lower is better)
Translates to: RNACAFCARQRDGDTASGPRATI*GLLGPS
Trigger: GCTTGGGCCCAGTAGCCCCAATATGGTGGCCCTGGG...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS CCA 90 bp CTGGGGCAAGGCGCTACGTTTCTCCACTCTGCCCTGCCTGCATGGTaGTTGCTGGGGAGACTTGAGGTGACAGGAGAGAAGGCACATTTT +
Preference number: 5 (lower is better)
Translates to: LGQGATFLHSALPAW*LLGRLEVTGEKAHF
Trigger: AAAATGTGCCTTCTCTCCTGTCACCTCAAGTCTCCCCAGCAACCACCATGCAGGCAGGGCAGAGTGGAGAAACGTAGCGCCTTGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS-3UTR CAA 90 bp CCACAGTGGGTGGCCTGGTACCCAGCTCTTCCAGGTCAGTGGAGTAGCAGGGGAAGATTAAAGGCCCACTaGAGCTTCTCGTGGACTGTG +
Preference number: 5 (lower is better)
Translates to: PQWVAWYPALPGQWSSRGRLKAH*SFSWTV
Trigger: CACAGTCCACGAGAAGCTCAAGTGGGCCTTTAATCT...TCCCCTGCTACTCCACTGACCTGGAAGAGCTGGGTACCAGGCCACCCACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS TCA 90 bp CCTGTCTCCTGTGCGCCTTTGACAAGTTGTTCAGCAAACGTGTCCTaGCAGCTGGGTGTGGAAAGGCCCTGCCCTCTAGGAAGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: PVSCAPLTSCSANVS*QLGVERPCPLGSFR
Trigger: ACGGAAGCTTCCTAGAGGGCAGGGCCTTTCCACACCCAGCTGTCAGGACACGTTTGCTGAACAACTTGTCAAAGGCGCACAGGAGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp CCATCATCCCGAGAGTTTCCACACCACAGACAGAGGCTGAGCACTTaGAACAAACCTCCAGGACCTGGACCGGACATTTTGCCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: PSSREFPHHRQRLST*NKPPGPGPDILPRG
Trigger: GCCACGAGGCAAAATGTCCGGTCCAGGTCCTGGAGGTTTGTTCCAAGTGCTCAGCCTCTGTCTGTGGTGTGGAAACTCTCGGGATGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS-3UTR CAA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGCAGAAAGCTGCAGGCTaGGCCTCCATTACCCCCTCT +
Preference number: 5 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWQKAAG*ASITPS
Trigger: AGAGGGGGTAATGGAGGCCAAGCCTGCAGCTTTCTG...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS CCA 90 bp CTCACTCATGCATTCACAGGTGCTAGCGCTTCCATGGGAAGGGGTTaGGGACAAGTCTCAGCCAAGGTGACAGCATCACAGATGGGTAGG +
Preference number: 5 (lower is better)
Translates to: LTHAFTGASASMGRG*GQVSAKVTASQMGR
Trigger: CCTACCCATCTGTGATGCTGTCACCTTGGCTGAGACTTGTCCCCAACCCCTTCCCATGGAAGCGCTAGCACCTGTGAATGCATGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS-3UTR CAA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCACTCGAGCCCCTTCTaGGTGACATCCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SGAGLAVMECIMWECSWRHSSPF*VTSSSW
Trigger: CCAGCTGCTGGATGTCACCAAGAAGGGGCTCGAGTG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp TGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGGGCCATGCCCATTGGCTCCAGCTTaGGGCTGGCATTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: WAGCDGMYYVGMFLEGPCPLAPA*GWHSPS
Trigger: GGATGGAGAATGCCAGCCCAAAGCTGGAGCCAATGG...GCATGGCCCCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGACCATTGGCTCCAGCTTaGGGCTGGCATTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: RNACAFCARQRDGDTASGPLAPA*GWHSPS
Trigger: GGATGGAGAATGCCAGCCCAAAGCTGGAGCCAATGG...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS TCA 90 bp ACACCACACCATCATCCCGAGAGTTTCCACACCACAGACAGAGGCTaGGCACTTGGAACAAACCTCCAGGACCTGGACCGGACATTTTGC +
Preference number: 5 (lower is better)
Translates to: TPHHHPESFHTTDRG*ALGTNLQDLDRTFC
Trigger: GCAAAATGTCCGGTCCAGGTCCTGGAGGTTTGTTCCAAGTGCTCAGCCTCTGTCTGTGGTGTGGAAACTCTCGGGATGATGGTGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS GCA 90 bp AAGGAGGGGAGGACTGTCTTCTGCTGGAGGTCAGAGCTGGCTGTGTaGACATCTGTGTGCAGCCTGACTCTGGAAATTCCCATCTCTGTA +
Preference number: 5 (lower is better)
Translates to: KEGRTVFCWRSELAV*TSVCSLTLEIPISV
Trigger: TACAGAGATGGGAATTTCCAGAGTCAGGCTGCACACAGATGTGCACACAGCCAGCTCTGACCTCCAGCAGAAGACAGTCCTCCCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS CCA 90 bp GTGATGAGCTCCACACTGCCTTCCTTGCACAATCAAATAGGCTCTTaGATGTGTCGTTCACATCTGCTCCCAGTGCCGGCACAAGGTCCG +
Preference number: 5 (lower is better)
Translates to: VMSSTLPSLHNQIGS*MCRSHLLPVPAQGP
Trigger: CGGACCTTGTGCCGGCACTGGGAGCAGATGTGAACGACACATCCAAGAGCCTATTTGATTGTGCAAGGAAGGCAGTGTGGAGCTCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS-3UTR CAA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGTTGATACCCTCCTTCTaGCTAAGTGGTGTGTGCCCG +
Preference number: 5 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWLIPSF*LSGVCP
Trigger: CGGGCACACACCACTTAGCAAGAAGGAGGGTATCAA...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp GACCCAATCCCTAAACTTGAAATCCCCCGCCTTCCTGCCATGGAGGGAGAATGGACCCAATCCCTAAACTaGAAATCCCCCGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: DPIPKLEIPRLPAMEGEWTQSLN*KSPAFL
Trigger: CAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGT...CCATTCTCCCTCCATGGCAGGAAGGCGGGGGATTTCAAGTTTAGGGATTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp GCTAAGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCGGACCTAAGAGGACCTaGGAGGGAACAGTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: AKECLCFLCKAEGRRHCFGPKRT*EGTVCA
Trigger: AGCACAGACTGTTCCCTCCAAGGTCCTCTTAGGTCC...GAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS TCA 90 bp CAGTTGAAGAAACCCAAGTCCCACAGCCCTTGTGGGCATCAAACTTaGGAAACAGGTCTGTCCAGTTGTGGCACTGGCCATGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QLKKPKSHSPCGHQT*ETGLSSCGTGHASG
Trigger: TCCAGAGGCATGGCCAGTGCCACAACTGGACAGACCTGTTTCTCAAGTTTGATGCCCACAAGGGCTGTGGGACTTGGGTTTCTTCAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 90 bp CTAAGGGAGAGCAGGCGCATTTTCATTCTGATGCAGAATGAACAGTaGCCTGAAGGCGGTCCTTCCCGGTCGAGCTATGTGCATGTGCTT +
Preference number: 5 (lower is better)
Translates to: LRESRRIFILMQNEQ*PEGGPSRSSYVHVL
Trigger: AAGCACATGCACATAGCTCGACCGGGAAGGACCGCCTTCAGGGCACTGTTCATTCTGCATCAGAATGAAAATGCGCCTGCTCTCCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp GGAGTGTGCCAAGGTGAAACCCTCGAGCCGCTAGTTCAGTCTCCATaGTTCTCATCAACTGTGCTCCAGAGAAACTCCCAGAAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: GVCQGETLEPLVQSP*FSSTVLQRNSQKAF
Trigger: GAAGGCTTTCTGGGAGTTTCTCTGGAGCACAGTTGATGAGAACCATGGAGACTGAACTAGCGGCTCGAGGGTTTCACCTTGGCACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS-3UTR CAA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGAATGCTTGTGCTTTTaGTGCAAGGCAGAGGGACGG +
Preference number: 5 (lower is better)
Translates to: RNACAFCARQRDGDTASGECLCF*CKAEGR
Trigger: CCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS-3UTR CAA 90 bp AGTGGAGCTGGGCTGGCTGTGATGGAATGTATTATGTGGGAATGTTCCTGGAGGCCAGGGTTTGTGCTTTaGAATGTTGGTCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SGAGLAVMECIMWECSWRPGFVL*NVGQPG
Trigger: GCCCGGCTGACCAACATTCAAAAGCACAAACCCTGG...CCTCCAGGAACATTCCCACATAATACATTCCATCACAGCCAGCCCAGCTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS TCA 90 bp ATCTGGCTGAGAAGATGGAGTCAGACTGTCAGGAGTGTGCCAAGGTaGAACCCTCGAGCCGCTAGTTCAGTCTCCATGGTTCTCATCAAC +
Preference number: 5 (lower is better)
Translates to: IWLRRWSQTVRSVPR*NPRAASSVSMVLIN
Trigger: GTTGATGAGAACCATGGAGACTGAACTAGCGGCTCGAGGGTTTCACCTTGGCACACTCCTGACAGTCTGACTCCATCTTCTCAGCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS TCA 90 bp ATACTCGGCAAACACCAAATATCACCCATGGCAAGCCCAGGGCAGTaGTTTCTGCCCGTTCTCTCGTTAACACACCACCAGAATGCAGCC +
Preference number: 5 (lower is better)
Translates to: ILGKHQISPMASPGQ*FLPVLSLTHHQNAA
Trigger: GGCTGCATTCTGGTGGTGTGTTAACGAGAGAACGGGCAGAAATCACTGCCCTGGGCTTGCCATGGGTGATATTTGGTGTTTGCCGAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 90 bp TCTGTGAACTTCCTGAGGCCTGGAGCCCACCCTGTTTCGGTTGTCTaGAGCTGGGACCCCAGGTTATTTGTGGGTGACATTATTATTCCA +
Preference number: 5 (lower is better)
Translates to: SVNFLRPGAHPVSVV*SWDPRLFVGDIIIP
Trigger: TGGAATAATAATGTCACCCACAAATAACCTGGGGTCCCAGCTGCAGACAACCGAAACAGGGTGGGCTCCAGGCCTCAGGAAGTTCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp CATTATTTCCCATCTTCAAATGTGCCCTGTGGACAGGTTCCAGCCTaGCTTCTCACGGAAGGCTTAGAAAGGATCAATGAGGTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: HYFPSSNVPCGQVPA*LLTEGLERINEVPR
Trigger: CCGGGGCACCTCATTGATCCTTTCTAAGCCTTCCGTGAGAAGCCAGGCTGGAACCTGTCCACAGGGCACATTTGAAGATGGGAAATAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS TCA 90 bp CAGAGGCAGACTCTTATACGCACCATACTCACATGTGTGATCCCATaGGTGTGCATGGTGTGTGGGTGCCTGCATGTGGTGTGTGTATGT +
Preference number: 5 (lower is better)
Translates to: QRQTLIRTILTCVIP*VCMVCGCLHVVCVC
Trigger: ACATACACACACCACATGCAGGCACCCACACACCATGCACACTCATGGGATCACACATGTGAGTATGGTGCGTATAAGAGTCTGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 90 bp AGGGATGGAGGGAGGGTACCACTGCAGCACCCCTTAAATACTTGTTaGCACCAAGAAAACCCTGGAAGACTGAAGTGGAGGAAATCTGAG +
Preference number: 5 (lower is better)
Translates to: RDGGRVPLQHPLNTC*HQENPGRLKWRKSE
Trigger: CTCAGATTTCCTCCACTTCAGTCTTCCAGGGTTTTCTTGGTGGCAACAAGTATTTAAGGGGTGCTGCAGTGGTACCCTCCCTCCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp CACCAGGCACTGCACACATTATTTCCCATCTTCAAATGTGCCCTGTaGACAGGTTCCAGCCTGGCTTCTCACGGAAGGCTTAGAAAGGAT +
Preference number: 5 (lower is better)
Translates to: HQALHTLFPIFKCAL*TGSSLASHGRLRKD
Trigger: ATCCTTTCTAAGCCTTCCGTGAGAAGCCAGGCTGGAACCTGTCCACAGGGCACATTTGAAGATGGGAAATAATGTGTGCAGTGCCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp CCCACCCTGTTTCGGTTGTCTGCAGCTGGGACCCCAGGTTATTTGTaGGTGACATTATTATTCCAGTTGAAGAAACCCAAGTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: PTLFRLSAAGTPGYL*VTLLFQLKKPKSHS
Trigger: GCTGTGGGACTTGGGTTTCTTCAACTGGAATAATAATGTCACCCACAAATAACCTGGGGTCCCAGCTGCAGACAACCGAAACAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp AACTTCCTGAGGCCTGGAGCCCACCCTGTTTCGGTTGTCTGCAGCTaGGACCCCAGGTTATTTGTGGGTGACATTATTATTCCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: NFLRPGAHPVSVVCS*DPRLFVGDIIIPVE
Trigger: TTCAACTGGAATAATAATGTCACCCACAAATAACCTGGGGTCCCAGCTGCAGACAACCGAAACAGGGTGGGCTCCAGGCCTCAGGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS-3UTR CAA 90 bp AGGAATGCTTGTGCTTTTTGTGCAAGGCAGAGGGACGGCGACACTGCTTCAGGAGCTGCTAAGGAATGCTaGTGCTTTTTGTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: RNACAFCARQRDGDTASGAAKEC*CFLCKA
Trigger: TGCCTTGCACAAAAAGCACAAGCATTCCTTAGCAGC...TCCTGAAGCAGTGTCGCCGTCCCTCTGCCTTGCACAAAAAGCACAAGCATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS GCA 90 bp GAGGGTCCAAGAGAGCAAACAAGATGCAGCTGTCAAGGGCAAGTCTaGACCTTTTCCTTAAAGTCAGAGGCAGACTCTTATACGCACCAT +
Preference number: 5 (lower is better)
Translates to: EGPREQTRCSCQGQV*TFSLKSEADSYTHH
Trigger: ATGGTGCGTATAAGAGTCTGCCTCTGACTTTAAGGAAAAGGTGCAGACTTGCCCTTGACAGCTGCATCTTGTTTGCTCTCTTGGACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 90 bp GACATTATTATTCCAGTTGAAGAAACCCAAGTCCCACAGCCCTTGTaGGCATCAAACTTGAGAAACAGGTCTGTCCAGTTGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: DIIIPVEETQVPQPL*ASNLRNRSVQLWHW
Trigger: CCAGTGCCACAACTGGACAGACCTGTTTCTCAAGTTTGATGCCCACAAGGGCTGTGGGACTTGGGTTTCTTCAACTGGAATAATAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp AGCACCACCACGGCCATGGCGCACAGCTCCATGCCCTaGATGCCCATGGCAAGCCGGGCTGCCTGGGGCCCT +
Preference number: 6 (lower is better)
Translates to: STTTAMAHSSMP*MPMASRAAWGP
Trigger: AGGGCCCCAGGCAGCCCGGCTTGCCATGGGCATCCAGGGCATGGAGCTGTGCGCCATGGCCGTGGTGGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468529.1
CDS GCA 72 bp GGTGGCCCACGGAGCAGCGTCCCACTCCTTGCCCCATaGCCAGCATGGCACAGCTTCGTCTTGAGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: GGPRSSVPLLAP*PAWHSFVLRRP
Trigger: GGGCCTCCTCAAGACGAAGCTGTGCCATGCTGGGCATGGGGCAAGGAGTGGGACGCTGCTCCGTGGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS GCA 72 bp GTGGACCTGAGCCGCCAGCACATGCGATGGCCACCGTaGTCTCGCCCCCACCCTAAGGGAGAGCAGGCGCAT +
Preference number: 6 (lower is better)
Translates to: VDLSRQHMRWPP*SRPHPKGEQAH
Trigger: ATGCGCCTGCTCTCCCTTAGGGTGGGGGCGAGAGCACGGTGGCCATCGCATGTGCTGGCGGCTCAGGTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp CCCGTCAGAGTGGACCTGAGCCGCCAGCACATGCGATaGCCACCGTGCTCTCGCCCCCACCCTAAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: PVRVDLSRQHMR*PPCSRPHPKGE
Trigger: CTCTCCCTTAGGGTGGGGGCGAGAGCACGGTGGCCATCGCATGTGCTGGCGGCTCAGGTCCACTCTGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp GCCTGGCGGCTGAGCCTCGGCCTCTGCCACTTGATACCCTCCTTCTaGCTAAGTGGTGTGTGCCCGAGGTCCCCCAGGAGGCTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: AWRLSLGLCHLIPSF*LSGVCPRSPRRLPS
Trigger: GGACGGCAGCCTCCTGGGGGACCTCGGGCACACACCACTTAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAGCCGCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS TCA 72 bp TCGAGCGACCTGAAGCTGTGCCCGTCAGAGTGGACCTaGGCCGCCAGCACATGCGATGGCCACCGTGCTCTC +
Preference number: 6 (lower is better)
Translates to: SSDLKLCPSEWT*AASTCDGHRAL
Trigger: GAGAGCACGGTGGCCATCGCATGTGCTGGCGGCTCAGGTCCACTCTGACGGGCACAGCTTCAGGTCGCTCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 72 bp CAGCTGCTAGAGCGTTCCTGCCAGAGTGGTCCAGGATaGCAGGCATCTCCCAAGGCGCTAGGTGGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: QLLERSCQSGPG*QASPKALGGAL
Trigger: CAGGGCCCCACCTAGCGCCTTGGGAGATGCCTGGCATCCTGGACCACTCTGGCAGGAACGCTCTAGCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp CGGAGCAGCGTCCCACTCCTTGCCCCATGCCCAGCATaGCACAGCTTCGTCTTGAGGAGGCCCATCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RSSVPLLAPCPA*HSFVLRRPIWL
Trigger: CAGCCAGATGGGCCTCCTCAAGACGAAGCTGTGCCATGCTGGGCATGGGGCAAGGAGTGGGACGCTGCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS CCA 72 bp CCCGGGAGCTATGGCCAAGGGAGACAAAGGGCACATTaGAGTCCCGGCTCCTCTGTCCGTGAGGTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: PGSYGQGRQRAH*SPGSSVREVPG
Trigger: CCCAGGGACCTCACGGACAGAGGAGCCGGGACTCCAATGTGCCCTTTGTCTCCCTTGGCCATAGCTCCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp AGAGGCCCCACTGCTGGCCACCTCCTGACTCCATCCTaGGGTCTTCACACCCAGAATTGGCCACCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: RGPTAGHLLTPS*GLHTQNWPPRA
Trigger: GGCCCTGGGTGGCCAATTCTGGGTGTGAAGACCCCAGGATGGAGTCAGGAGGTGGCCAGCAGTGGGGCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp TGGCCCCTACCTGAGCCCTGTGGGGCTGTGCTGGACAGGATCCACTaGACCAGGCAGCATCTCATCAAAGCCTGGCGGCTGAGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: WPLPEPCGAVLDRIH*TRQHLIKAWRLSLG
Trigger: GCCGAGGCTCAGCCGCCAGGCTTTGATGAGATGCTGCCTGGTCAAGTGGATCCTGTCCAGCACAGCCCCACAGGGCTCAGGTAGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS TCA 72 bp CGCGCAGCACTTCACACGTGCACAAAGCCCTCAGTGTaGCCACACCAGCCCGGCCTCCTTGCGGGACACACA +
Preference number: 6 (lower is better)
Translates to: RAALHTCTKPSV*PHQPGLLAGHT
Trigger: TGTGTGTCCCGCAAGGAGGCCGGGCTGGTGTGGTCACACTGAGGGCTTTGTGCACGTGTGAAGTGCTGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 72 bp TGCCACTTGATACCCTCCTTCTTGCTAAGTGGTGTGTaGCCGAGGTCCCCCAGGAGGCTGCCGTCCGACGCC +
Preference number: 6 (lower is better)
Translates to: CHLIPSFLLSGV*PRSPRRLPSDA
Trigger: GGCGTCGGACGGCAGCCTCCTGGGGGACCTCGGGCACACACCACTTAGCAAGAAGGAGGGTATCAAGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS CCA 72 bp GCCCGGCCTCCTTGCGGGACACACACGGGACGTGTTTaGACTGAAGAGAGGAGACCCGGGAGCTATGGCCAA +
Preference number: 6 (lower is better)
Translates to: ARPPCGTHTGRV*TEERRPGSYGQ
Trigger: TTGGCCATAGCTCCCGGGTCTCCTCTCTTCAGTCCAAACACGTCCCGTGTGTGTCCCGCAAGGAGGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp TCGCTGCTATCTGAGCCCTGTGGGGCTGTGCTGGACAGGATCCACTaGACCAGGCAGCATCTCATCAAAGCCTGGCGGCTGAGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: SLLSEPCGAVLDRIH*TRQHLIKAWRLSLG
Trigger: GCCGAGGCTCAGCCGCCAGGCTTTGATGAGATGCTGCCTGGTCAAGTGGATCCTGTCCAGCACAGCCCCACAGGGCTCAGATAGCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS CAA 90 bp GCCCTGGCCCAGCCCTGGCCCTGTCTCCTGTGCGCCTTTGACAAGTaGTTCAGCAAACGTGTCCTGACAGCTGGGTGTGGAAAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: ALAQPWPCLLCAFDK*FSKRVLTAGCGKAL
Trigger: CAGGGCCTTTCCACACCCAGCTGTCAGGACACGTTTGCTGAACAACTTGTCAAAGGCGCACAGGAGACAGGGCCAGGGCTGGGCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS TCA 72 bp CATTCAGGGCAGGTGTGCCGGTGTTCAGAAAGGTCCTaGCTCTGCCGCTCCCCGGCCCTCAGTTTCCTCGTC +
Preference number: 6 (lower is better)
Translates to: HSGQVCRCSERS*LCRSPALSFLV
Trigger: GACGAGGAAACTGAGGGCCGGGGAGCGGCAGAGTCAGGACCTTTCTGAACACCGGCACACCTGCCCTGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377181.2
CDS GCA 72 bp GACACACACAACCATCTCCGGTGGTCCCCAAGGCCCTaGAGCTGTGGATGCATTCAGGGCAGGTGTGCCGGT +
Preference number: 6 (lower is better)
Translates to: DTHNHLRWSPRP*SCGCIQGRCAG
Trigger: ACCGGCACACCTGCCCTGAATGCATCCACAGCTGCAGGGCCTTGGGGACCACCGGAGATGGTTGTGTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377181.2
CDS CCA 72 bp CTGGTGCGTAGCAGCCAGTCCCTTTGTGCACAGGCATaGACCTCTGGCTGTGGCTGTCAGCCACTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: LVRSSQSLCAQA*TSGCGCQPLCL
Trigger: CAGGCACAGTGGCTGACAGCCACAGCCAGAGGTCCATGCCTGTGCACAAAGGGACTGGCTGCTACGCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp GGAGGGGGCTGGAATCGTGCTGGGAGCACCCTGGAGTaGCATTTGTGGGTAAAGGACGGGGATCTGGTGCGT +
Preference number: 6 (lower is better)
Translates to: GGGWNRAGSTLE*HLWVKDGDLVR
Trigger: ACGCACCAGATCCCCGTCCTTTACCCACAAATGCCACTCCAGGGTGCTCCCAGCACGATTCCAGCCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp GGGAACAAACCCATCGCTGGTGCCCTGGCCCAGCCCTaGCCCTGTCTCCTGTGCGCCTTTGACAAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: GNKPIAGALAQP*PCLLCAFDKLF
Trigger: GAACAACTTGTCAAAGGCGCACAGGAGACAGGGCCAGGGCTGGGCCAGGGCACCAGCGATGGGTTTGTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp TGGGCCTCGCAGAGCACACAGTGGGGCTGCACTGAATaGGCCCCATTGTTCTTTGCACCCAGAGCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: WASQSTQWGCTE*APLFFAPRACA
Trigger: GGCACAGGCTCTGGGTGCAAAGAACAATGGGGCCCATTCAGTGCAGCCCCACTGTGTGCTCTGCGAGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp TGGTCCAGGATGCCAGGCATCTCCCAAGGCGCTAGGTaGGGCCCTGGCTTCGTCCCATTCAGACCTCGTTCT +
Preference number: 6 (lower is better)
Translates to: WSRMPGISQGAR*GPGFVPFRPRS
Trigger: AGAACGAGGTCTGAATGGGACGAAGCCAGGGCCCCACCTAGCGCCTTGGGAGATGCCTGGCATCCTGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 72 bp CTGAGCCTCGGCCTCTGCCACTTGATACCCTCCTTCTaGCTAAGTGGTGTGTGCCCGAGGTCCCCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LSLGLCHLIPSF*LSGVCPRSPRR
Trigger: CCTCCTGGGGGACCTCGGGCACACACCACTTAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS CAA 72 bp CCTGAGCCCTGTGGGGCTGTGCTGGACAGGATCCACTaGACCAGGCAGCATCTCATCAAAGCCTGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: PEPCGAVLDRIH*TRQHLIKAWRL
Trigger: CAGCCGCCAGGCTTTGATGAGATGCTGCCTGGTCAAGTGGATCCTGTCCAGCACAGCCCCACAGGGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp CAGCATCTCATCAAAGCCTGGCGGCTGAGCCTCGGCCTCTGCCACTaGATACCCTCCTTCTTGCTAAGTGGTGTGTGCCCGAGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: QHLIKAWRLSLGLCH*IPSFLLSGVCPRSP
Trigger: GGGGGACCTCGGGCACACACCACTTAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAGCCGCCAGGCTTTGATGAGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS CAA 90 bp AAGGGAGGGGGCTGGAATCGTGCTGGGAGCACCCTGGAGTGGCATTaGTGGGTAAAGGACGGGGATCTGGTGCGTAGCAGCCAGTCCCTT +
Preference number: 6 (lower is better)
Translates to: KGGGWNRAGSTLEWH*WVKDGDLVRSSQSL
Trigger: AAGGGACTGGCTGCTACGCACCAGATCCCCGTCCTTTACCCACAAATGCCACTCCAGGGTGCTCCCAGCACGATTCCAGCCCCCTCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 72 bp TCACTGCGGGAATGTAGGAGGCAGGGCTGTCCCCCATaGCTTCCTCTCCCCCTGAACACAGTCCAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: SLRECRRQGCPP*LPLPLNTVQSL
Trigger: CAGAGACTGGACTGTGTTCAGGGGGAGAGGAAGGCATGGGGGACAGCCCTGCCTCCTACATTCCCGCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS GCA 72 bp AAAGCCCTCAGTGTGACCACACCAGCCCGGCCTCCTTaGGGGACACACACGGGACGTGTTTGGACTGAAGAG +
Preference number: 6 (lower is better)
Translates to: KALSVTTPARPP*GTHTGRVWTEE
Trigger: CTCTTCAGTCCAAACACGTCCCGTGTGTGTCCCGCAAGGAGGCCGGGCTGGTGTGGTCACACTGAGGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp CTTACTCAGGGCGTGAGCAGTGGGCAGGGTGGAGCCTaGTTTGTTGGACTCTGCAGCCTGGCTCTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: LTQGVSSGQGGA*FVGLCSLALSS
Trigger: GGAAGACAGAGCCAGGCTGCAGAGTCCAACAAACCAGGCTCCACCCTGCCCACTGCTCACGCCCTGAGTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp CCTAGGAGGCTGGGACCCCGATCATGCCCATTCTCCTaGCCAGGGGACAAACGCTCCCTGGAAATCACACAG +
Preference number: 6 (lower is better)
Translates to: PRRLGPRSCPFS*PGDKRSLEITQ
Trigger: CTGTGTGATTTCCAGGGAGCGTTTGTCCCCTGGCCAGGAGAATGGGCATGATCGGGGTCCCAGCCTCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp CATGCAGGGCAGGCCAGAGTCCCAGCTTCCGGGTCATaGAAGAGGGTCCAAGGAGCTTCTAGGCTGAGGATG +
Preference number: 6 (lower is better)
Translates to: HAGQARVPASGS*KRVQGASRLRM
Trigger: CATCCTCAGCCTAGAAGCTCCTTGGACCCTCTTCCATGACCCGGAAGCTGGGACTCTGGCCTGCCCTGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 72 bp TCTGAGCCCTGTGGGGCTGTGCTGGACAGGATCCACTaGACCAGGCAGCATCTCATCAAAGCCTGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: SEPCGAVLDRIH*TRQHLIKAWRL
Trigger: CAGCCGCCAGGCTTTGATGAGATGCTGCCTGGTCAAGTGGATCCTGTCCAGCACAGCCCCACAGGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295225.10
ENST00000360990.7
CDS CAA 72 bp GGCTGGAATCGTGCTGGGAGCACCCTGGAGTGGCATTaGTGGGTAAAGGACGGGGATCTGGTGCGTAGCAGC +
Preference number: 6 (lower is better)
Translates to: GWNRAGSTLEWH*WVKDGDLVRSS
Trigger: GCTGCTACGCACCAGATCCCCGTCCTTTACCCACAAATGCCACTCCAGGGTGCTCCCAGCACGATTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp TCGCTGCTATCTTCCATGGATATGGGCTCCAGGATGCCGAACTGCTaGAGGACGGCGATGAACAGCAGCACCACCACGGCCATGGCGCAC +
Preference number: 6 (lower is better)
Translates to: SLLSSMDMGSRMPNC*RTAMNSSTTTAMAH
Trigger: GTGCGCCATGGCCGTGGTGGTGCTGCTGTTCATCGCCGTCCTCAAGCAGTTCGGCATCCTGGAGCCCATATCCATGGAAGATAGCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468529.1
CDS GCA 72 bp AGGGTCGCTCAATGTGTCTCTGCCTATGGGCACGGTTaGACTGTGCACCCTGACGCCGTAGTGTGTGAGCCT +
Preference number: 6 (lower is better)
Translates to: RVAQCVSAYGHG*TVHPDAVVCEP
Trigger: AGGCTCACACACTACGGCGTCAGGGTGCACAGTGCAACCGTGCCCATAGGCAGAGACACATTGAGCGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS CCA 72 bp AGGATCCACTTGACCAGGCAGCATCTCATCAAAGCCTaGCGGCTGAGCCTCGGCCTCTGCCACTTGATACCC +
Preference number: 6 (lower is better)
Translates to: RIHLTRQHLIKA*RLSLGLCHLIP
Trigger: GGGTATCAAGTGGCAGAGGCCGAGGCTCAGCCGCCAGGCTTTGATGAGATGCTGCCTGGTCAAGTGGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS CCA 72 bp GTGGTGGTGGCAAAAGGGAGGGGGCTGGAATCGTGCTaGGAGCACCCTGGAGTGGCATTTGTGGGTAAAGGA +
Preference number: 6 (lower is better)
Translates to: VVVAKGRGLESC*EHPGVAFVGKG
Trigger: TCCTTTACCCACAAATGCCACTCCAGGGTGCTCCCAGCACGATTCCAGCCCCCTCCCTTTTGCCACCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp GGGGCCCTGGCTTCGTCCCATTCAGACCTCGTTCTCTaGTCCTCCGGAGTTTCTGTGAACTTCCTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GALASSHSDLVL*SSGVSVNFLRP
Trigger: AGGCCTCAGGAAGTTCACAGAAACTCCGGAGGACCAGAGAACGAGGTCTGAATGGGACGAAGCCAGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp GGCGCTACGTTTCTCCACTCTGCCCTGCCTGCATGGTaGTTGCTGGGGAGACTTGAGGTGACAGGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: GATFLHSALPAW*LLGRLEVTGEK
Trigger: CTTCTCTCCTGTCACCTCAAGTCTCCCCAGCAACCACCATGCAGGCAGGGCAGAGTGGAGAAACGTAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS CAA 72 bp ATCAAAGCCTGGCGGCTGAGCCTCGGCCTCTGCCACTaGATACCCTCCTTCTTGCTAAGTGGTGTGTGCCCG +
Preference number: 6 (lower is better)
Translates to: IKAWRLSLGLCH*IPSFLLSGVCP
Trigger: CGGGCACACACCACTTAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAGCCGCCAGGCTTTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS CAA 72 bp TCTTCCATGGATATGGGCTCCAGGATGCCGAACTGCTaGAGGACGGCGATGAACAGCAGCACCACCACGGCC +
Preference number: 6 (lower is better)
Translates to: SSMDMGSRMPNC*RTAMNSSTTTA
Trigger: GGCCGTGGTGGTGCTGCTGTTCATCGCCGTCCTCAAGCAGTTCGGCATCCTGGAGCCCATATCCATGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468529.1
CDS CAA 72 bp CAGAGCACACAGTGGGGCTGCACTGAATGGGCCCCATaGTTCTTTGCACCCAGAGCCTGTGCCAGCTCCCAA +
Preference number: 6 (lower is better)
Translates to: QSTQWGCTEWAP*FFAPRACASSQ
Trigger: TTGGGAGCTGGCACAGGCTCTGGGTGCAAAGAACAATGGGGCCCATTCAGTGCAGCCCCACTGTGTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp AGGCTGAGCACTTGGAACAAACCTCCAGGACCTGGACCGGACATTTaGCCTCGTGGCTCCCTACACTCTAGGTCCCCTGAGAGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: RLSTWNKPPGPGPDI*PRGSLHSRSPERPG
Trigger: ACCTGGCCTCTCAGGGGACCTAGAGTGTAGGGAGCCACGAGGCAAAATGTCCGGTCCAGGTCCTGGAGGTTTGTTCCAAGTGCTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS CAA 90 bp CCACAGCCCTTGTGGGCATCAAACTTGAGAAACAGGTCTGTCCAGTaGTGGCACTGGCCATGCCTCTGGAGAGGCATCCTGCAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: PQPLWASNLRNRSVQ*WHWPCLWRGILQGE
Trigger: CTCTCCCTGCAGGATGCCTCTCCAGAGGCATGGCCAGTGCCACAACTGGACAGACCTGTTTCTCAAGTTTGATGCCCACAAGGGCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp GGGCAAGGCGCTACGTTTCTCCACTCTGCCCTGCCTGCATGGTGGTaGCTGGGGAGACTTGAGGTGACAGGAGAGAAGGCACATTTTCCA +
Preference number: 6 (lower is better)
Translates to: GQGATFLHSALPAWW*LGRLEVTGEKAHFP
Trigger: TGGAAAATGTGCCTTCTCTCCTGTCACCTCAAGTCTCCCCAGCAACCACCATGCAGGCAGGGCAGAGTGGAGAAACGTAGCGCCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS TCA 72 bp AGACTGAAGTGGAGGAAATCTGAGTCTCGAGCGACCTaGAGCTGTGCCCGTCAGAGTGGACCTGAGCCGCCA +
Preference number: 6 (lower is better)
Translates to: RLKWRKSESRAT*SCARQSGPEPP
Trigger: TGGCGGCTCAGGTCCACTCTGACGGGCACAGCTTCAGGTCGCTCGAGACTCAGATTTCCTCCACTTCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp TGGACTCTGCAGCCTGGCTCTGTCTTCCTAGCCAACTaGAAAACCGCAGTGTGGTCCCAGCTCTCTGTACCC +
Preference number: 6 (lower is better)
Translates to: WTLQPGSVFLAN*KTAVWSQLSVP
Trigger: GGGTACAGAGAGCTGGGACCACACTGCGGTTTTCCAGTTGGCTAGGAAGACAGAGCCAGGCTGCAGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 72 bp CAGCCCTGGCCCTGTCTCCTGTGCGCCTTTGACAAGTaGTTCAGCAAACGTGTCCTGACAGCTGGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: QPWPCLLCAFDK*FSKRVLTAGCG
Trigger: TCCACACCCAGCTGTCAGGACACGTTTGCTGAACAACTTGTCAAAGGCGCACAGGAGACAGGGCCAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 72 bp GCTACGTTTCTCCACTCTGCCCTGCCTGCATGGTGGTaGCTGGGGAGACTTGAGGTGACAGGAGAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: ATFLHSALPAWW*LGRLEVTGEKA
Trigger: TGCCTTCTCTCCTGTCACCTCAAGTCTCCCCAGCAACCACCATGCAGGCAGGGCAGAGTGGAGAAACGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS TCA 72 bp CATCATCCCGAGAGTTTCCACACCACAGACAGAGGCTaGGCACTTGGAACAAACCTCCAGGACCTGGACCGG +
Preference number: 6 (lower is better)
Translates to: HHPESFHTTDRG*ALGTNLQDLDR
Trigger: CCGGTCCAGGTCCTGGAGGTTTGTTCCAAGTGCTCAGCCTCTGTCTGTGGTGTGGAAACTCTCGGGATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS GCA 72 bp CATCTCATCAAAGCCTGGCGGCTGAGCCTCGGCCTCTaGCACTTGATACCCTCCTTCTTGCTAAGTGGTGTG +
Preference number: 6 (lower is better)
Translates to: HLIKAWRLSLGL*HLIPSFLLSGV
Trigger: CACACCACTTAGCAAGAAGGAGGGTATCAAGTGGCAGAGGCCGAGGCTCAGCCGCCAGGCTTTGATGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000475491.1
CDS GCA 72 bp CTATCTTCCATGGATATGGGCTCCAGGATGCCGAACTaGTTGAGGACGGCGATGAACAGCAGCACCACCACG +
Preference number: 6 (lower is better)
Translates to: LSSMDMGSRMPN*LRTAMNSSTTT
Trigger: CGTGGTGGTGCTGCTGTTCATCGCCGTCCTCAAGCAGTTCGGCATCCTGGAGCCCATATCCATGGAAGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468529.1
CDS GCA 72 bp CTTGGAACAAACCTCCAGGACCTGGACCGGACATTTTaGCTCGTGGCTCCCTACACTCTAGGTCCCCTGAGA +
Preference number: 6 (lower is better)
Translates to: LGTNLQDLDRTF*LVAPYTLGPLR
Trigger: TCTCAGGGGACCTAGAGTGTAGGGAGCCACGAGGCAAAATGTCCGGTCCAGGTCCTGGAGGTTTGTTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS GCA 72 bp TTCCTGAGGCCTGGAGCCCACCCTGTTTCGGTTGTCTaGAGCTGGGACCCCAGGTTATTTGTGGGTGACATT +
Preference number: 6 (lower is better)
Translates to: FLRPGAHPVSVV*SWDPRLFVGDI
Trigger: AATGTCACCCACAAATAACCTGGGGTCCCAGCTGCAGACAACCGAAACAGGGTGGGCTCCAGGCCTCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp CCAGCATGGCACAGCTTCGTCTTGAGGAGGCCCATCTaGCTGAGAAGATGGAGTCAGACTGTCAGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: PAWHSFVLRRPI*LRRWSQTVRSV
Trigger: CACACTCCTGACAGTCTGACTCCATCTTCTCAGCCAGATGGGCCTCCTCAAGACGAAGCTGTGCCATGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS CCA 72 bp GCATTCACAGGTGCTAGCGCTTCCATGGGAAGGGGTTaGGGACAAGTCTCAGCCAAGGTGACAGCATCACAG +
Preference number: 6 (lower is better)
Translates to: AFTGASASMGRG*GQVSAKVTASQ
Trigger: CTGTGATGCTGTCACCTTGGCTGAGACTTGTCCCCAACCCCTTCCCATGGAAGCGCTAGCACCTGTGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 72 bp ACTTGGAACAAACCTCCAGGACCTGGACCGGACATTTaGCCTCGTGGCTCCCTACACTCTAGGTCCCCTGAG +
Preference number: 6 (lower is better)
Translates to: TWNKPPGPGPDI*PRGSLHSRSPE
Trigger: CTCAGGGGACCTAGAGTGTAGGGAGCCACGAGGCAAAATGTCCGGTCCAGGTCCTGGAGGTTTGTTCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS CAA 90 bp ACCATCATCCCGAGAGTTTCCACACCACAGACAGAGGCTGAGCACTaGGAACAAACCTCCAGGACCTGGACCGGACATTTTGCCTCGTGG +
Preference number: 6 (lower is better)
Translates to: TIIPRVSTPQTEAEH*EQTSRTWTGHFASW
Trigger: CCACGAGGCAAAATGTCCGGTCCAGGTCCTGGAGGTTTGTTCCAAGTGCTCAGCCTCTGTCTGTGGTGTGGAAACTCTCGGGATGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS GCA 72 bp AGGACTGTCTTCTGCTGGAGGTCAGAGCTGGCTGTGTaGACATCTGTGTGCAGCCTGACTCTGGAAATTCCC +
Preference number: 6 (lower is better)
Translates to: RTVFCWRSELAV*TSVCSLTLEIP
Trigger: GGGAATTTCCAGAGTCAGGCTGCACACAGATGTGCACACAGCCAGCTCTGACCTCCAGCAGAAGACAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS CCA 72 bp TCAAACTTGAGAAACAGGTCTGTCCAGTTGTGGCACTaGCCATGCCTCTGGAGAGGCATCCTGCAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: SNLRNRSVQLWH*PCLWRGILQGE
Trigger: CTCTCCCTGCAGGATGCCTCTCCAGAGGCATGGCCAGTGCCACAACTGGACAGACCTGTTTCTCAAGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp TGGGCATCAAACTTGAGAAACAGGTCTGTCCAGTTGTaGCACTGGCCATGCCTCTGGAGAGGCATCCTGCAG +
Preference number: 6 (lower is better)
Translates to: WASNLRNRSVQL*HWPCLWRGILQ
Trigger: CTGCAGGATGCCTCTCCAGAGGCATGGCCAGTGCCACAACTGGACAGACCTGTTTCTCAAGTTTGATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp GGTGATGAGCTCCACACTGCCTTCCTTGCACAATCAAATAGGCTCTaGGATGTGTCGTTCACATCTGCTCCCAGTGCCGGCACAAGGTCC +
Preference number: 6 (lower is better)
Translates to: GDELHTAFLAQSNRL*DVSFTSAPSAGTRS
Trigger: GGACCTTGTGCCGGCACTGGGAGCAGATGTGAACGACACATCCAAGAGCCTATTTGATTGTGCAAGGAAGGCAGTGTGGAGCTCATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS TCA 72 bp CCAAGAAAACCCTGGAAGACTGAAGTGGAGGAAATCTaGGTCTCGAGCGACCTGAAGCTGTGCCCGTCAGAG +
Preference number: 6 (lower is better)
Translates to: PRKPWKTEVEEI*VSSDLKLCPSE
Trigger: CTCTGACGGGCACAGCTTCAGGTCGCTCGAGACTCAGATTTCCTCCACTTCAGTCTTCCAGGGTTTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp CGAGAGTTTCCACACCACAGACAGAGGCTGAGCACTTaGAACAAACCTCCAGGACCTGGACCGGACATTTTG +
Preference number: 6 (lower is better)
Translates to: REFPHHRQRLST*NKPPGPGPDIL
Trigger: CAAAATGTCCGGTCCAGGTCCTGGAGGTTTGTTCCAAGTGCTCAGCCTCTGTCTGTGGTGTGGAAACTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS CAA 72 bp CCGAGAGTTTCCACACCACAGACAGAGGCTGAGCACTaGGAACAAACCTCCAGGACCTGGACCGGACATTTT +
Preference number: 6 (lower is better)
Translates to: PRVSTPQTEAEH*EQTSRTWTGHF
Trigger: AAAATGTCCGGTCCAGGTCCTGGAGGTTTGTTCCAAGTGCTCAGCCTCTGTCTGTGGTGTGGAAACTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS CAA 72 bp CTCCACACTGCCTTCCTTGCACAATCAAATAGGCTCTaGGATGTGTCGTTCACATCTGCTCCCAGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: LHTAFLAQSNRL*DVSFTSAPSAG
Trigger: GCCGGCACTGGGAGCAGATGTGAACGACACATCCAAGAGCCTATTTGATTGTGCAAGGAAGGCAGTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 72 bp TTGTGGGCATCAAACTTGAGAAACAGGTCTGTCCAGTaGTGGCACTGGCCATGCCTCTGGAGAGGCATCCTG +
Preference number: 6 (lower is better)
Translates to: LWASNLRNRSVQ*WHWPCLWRGIL
Trigger: CAGGATGCCTCTCCAGAGGCATGGCCAGTGCCACAACTGGACAGACCTGTTTCTCAAGTTTGATGCCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 72 bp GAAACCCAAGTCCCACAGCCCTTGTGGGCATCAAACTaGAGAAACAGGTCTGTCCAGTTGTGGCACTGGCCA +
Preference number: 6 (lower is better)
Translates to: ETQVPQPLWASN*RNRSVQLWHWP
Trigger: TGGCCAGTGCCACAACTGGACAGACCTGTTTCTCAAGTTTGATGCCCACAAGGGCTGTGGGACTTGGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS TCA 72 bp AGAAGATGGAGTCAGACTGTCAGGAGTGTGCCAAGGTaGAACCCTCGAGCCGCTAGTTCAGTCTCCATGGTT +
Preference number: 6 (lower is better)
Translates to: RRWSQTVRSVPR*NPRAASSVSMV
Trigger: AACCATGGAGACTGAACTAGCGGCTCGAGGGTTTCACCTTGGCACACTCCTGACAGTCTGACTCCATCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS TCA 72 bp AAACCCAAGTCCCACAGCCCTTGTGGGCATCAAACTTaGGAAACAGGTCTGTCCAGTTGTGGCACTGGCCAT +
Preference number: 6 (lower is better)
Translates to: KPKSHSPCGHQT*ETGLSSCGTGH
Trigger: ATGGCCAGTGCCACAACTGGACAGACCTGTTTCTCAAGTTTGATGCCCACAAGGGCTGTGGGACTTGGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 72 bp GGGAGGGTACCACTGCAGCACCCCTTAAATACTTGTTaGCACCAAGAAAACCCTGGAAGACTGAAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: GRVPLQHPLNTC*HQENPGRLKWR
Trigger: CCTCCACTTCAGTCTTCCAGGGTTTTCTTGGTGGCAACAAGTATTTAAGGGGTGCTGCAGTGGTACCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp CAAGGTGAAACCCTCGAGCCGCTAGTTCAGTCTCCATaGTTCTCATCAACTGTGCTCCAGAGAAACTCCCAG +
Preference number: 6 (lower is better)
Translates to: QGETLEPLVQSP*FSSTVLQRNSQ
Trigger: CTGGGAGTTTCTCTGGAGCACAGTTGATGAGAACCATGGAGACTGAACTAGCGGCTCGAGGGTTTCACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461336.5
CDS CCA 72 bp AGGCCTGGAGCCCACCCTGTTTCGGTTGTCTGCAGCTaGGACCCCAGGTTATTTGTGGGTGACATTATTATT +
Preference number: 6 (lower is better)
Translates to: RPGAHPVSVVCS*DPRLFVGDIII
Trigger: AATAATAATGTCACCCACAAATAACCTGGGGTCCCAGCTGCAGACAACCGAAACAGGGTGGGCTCCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp CCTGAGGGATGGAGGGAGGGTACCACTGCAGCACCCCTTAAATACTaGTTGCCACCAAGAAAACCCTGGAAGACTGAAGTGGAGGAAATC +
Preference number: 6 (lower is better)
Translates to: PEGWREGTTAAPLKY*LPPRKPWKTEVEEI
Trigger: GATTTCCTCCACTTCAGTCTTCCAGGGTTTTCTTGGTGGCAACAAGTATTTAAGGGGTGCTGCAGTGGTACCCTCCCTCCATCCCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp GAGCCCACCCTGTTTCGGTTGTCTGCAGCTGGGACCCCAGGTTATTaGTGGGTGACATTATTATTCCAGTTGAAGAAACCCAAGTCCCAC +
Preference number: 6 (lower is better)
Translates to: EPTLFRLSAAGTPGY*WVTLLFQLKKPKSH
Trigger: GTGGGACTTGGGTTTCTTCAACTGGAATAATAATGTCACCCACAAATAACCTGGGGTCCCAGCTGCAGACAACCGAAACAGGGTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS TCA 72 bp AAACACCAAATATCACCCATGGCAAGCCCAGGGCAGTaGTTTCTGCCCGTTCTCTCGTTAACACACCACCAG +
Preference number: 6 (lower is better)
Translates to: KHQISPMASPGQ*FLPVLSLTHHQ
Trigger: CTGGTGGTGTGTTAACGAGAGAACGGGCAGAAATCACTGCCCTGGGCTTGCCATGGGTGATATTTGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp TCTCATCCTTCTGACAGGCCTCCAGGAACTCTTCAATaGTCACTACCCCATCCTGGTTCCGGTCCATTTTCT +
Preference number: 6 (lower is better)
Translates to: SHPSDRPPGTLQ*SLPHPGSGPFS
Trigger: AGAAAATGGACCGGAACCAGGATGGGGTAGTGACCATTGAAGAGTTCCTGGAGGCCTGTCAGAAGGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295225.10
ENST00000360990.7
ENST00000377181.2
ENST00000468529.1
CDS CCA 72 bp CTGCACACATTATTTCCCATCTTCAAATGTGCCCTGTaGACAGGTTCCAGCCTGGCTTCTCACGGAAGGCTT +
Preference number: 6 (lower is better)
Translates to: LHTLFPIFKCAL*TGSSLASHGRL
Trigger: AAGCCTTCCGTGAGAAGCCAGGCTGGAACCTGTCCACAGGGCACATTTGAAGATGGGAAATAATGTGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 72 bp AGGGAGGGTACCACTGCAGCACCCCTTAAATACTTGTaGCCACCAAGAAAACCCTGGAAGACTGAAGTGGAG +
Preference number: 6 (lower is better)
Translates to: REGTTAAPLKYL*PPRKPWKTEVE
Trigger: CTCCACTTCAGTCTTCCAGGGTTTTCTTGGTGGCAACAAGTATTTAAGGGGTGCTGCAGTGGTACCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 72 bp TGGAGGGAGGGTACCACTGCAGCACCCCTTAAATACTaGTTGCCACCAAGAAAACCCTGGAAGACTGAAGTG +
Preference number: 6 (lower is better)
Translates to: WREGTTAAPLKY*LPPRKPWKTEV
Trigger: CACTTCAGTCTTCCAGGGTTTTCTTGGTGGCAACAAGTATTTAAGGGGTGCTGCAGTGGTACCCTCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CAA 90 bp AGACTTGAGGTGACAGGAGAGAAGGCACATTTTCCATGTGTAGTGTaGCCATGCTCAAAGGGCTTCATGCCATCACCTCAGCTGATCCTC +
Preference number: 6 (lower is better)
Translates to: RLEVTGEKAHFPCVV*PCSKGFMPSPQLIL
Trigger: GAGGATCAGCTGAGGTGATGGCATGAAGCCCTTTGAGCATGGCAACACTACACATGGAAAATGTGCCTTCTCTCCTGTCACCTCAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS CAA 72 bp GTGACAGGAGAGAAGGCACATTTTCCATGTGTAGTGTaGCCATGCTCAAAGGGCTTCATGCCATCACCTCAG +
Preference number: 6 (lower is better)
Translates to: VTGEKAHFPCVV*PCSKGFMPSPQ
Trigger: CTGAGGTGATGGCATGAAGCCCTTTGAGCATGGCAACACTACACATGGAAAATGTGCCTTCTCTCCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486055.1
CDS CAA 90 bp GGTGACATTATTATTCCAGTTGAAGAAACCCAAGTCCCACAGCCCTaGTGGGCATCAAACTTGAGAAACAGGTCTGTCCAGTTGTGGCAC +
Preference number: 6 (lower is better)
Translates to: GDIIIPVEETQVPQP*WASNLRNRSVQLWH
Trigger: GTGCCACAACTGGACAGACCTGTTTCTCAAGTTTGATGCCCACAAGGGCTGTGGGACTTGGGTTTCTTCAACTGGAATAATAATGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS TCA 72 bp TGTGTGAAGCAGGCACTCAATGAATGGGGAAGGGTGTaGATGAATGAAAACACACCTCCAATAGAGACAGGG +
Preference number: 6 (lower is better)
Translates to: CVKQALNEWGRV*MNENTPPIETG
Trigger: CCCTGTCTCTATTGGAGGTGTGTTTTCATTCATTCACACCCTTCCCCATTCATTGAGTGCCTGCTTCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS GCA 72 bp AGAGAGCAAACAAGATGCAGCTGTCAAGGGCAAGTCTaGACCTTTTCCTTAAAGTCAGAGGCAGACTCTTAT +
Preference number: 6 (lower is better)
Translates to: REQTRCSCQGQV*TFSLKSEADSY
Trigger: ATAAGAGTCTGCCTCTGACTTTAAGGAAAAGGTGCAGACTTGCCCTTGACAGCTGCATCTTGTTTGCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1
CDS CCA 72 bp TTTCGGTTGTCTGCAGCTGGGACCCCAGGTTATTTGTaGGTGACATTATTATTCCAGTTGAAGAAACCCAAG +
Preference number: 6 (lower is better)
Translates to: FRLSAAGTPGYL*VTLLFQLKKPK
Trigger: CTTGGGTTTCTTCAACTGGAATAATAATGTCACCCACAAATAACCTGGGGTCCCAGCTGCAGACAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475491.1