RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNIP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000120049

Ensembl transcript IDs: ENST00000239117.3, ENST00000343195.8, ENST00000348850.9, ENST00000353068.7, ENST00000355657.6, ENST00000356640.7, ENST00000358038.7, ENST00000370046.5, ENST00000434163.5, ENST00000461105.5, ENST00000472764.5, ENST00000483385.1, ENST00000642874.1

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTaGGGTGCTGACAATGGGGTTGGAACCTGGGTCCTATGGTCCCTG +
Preference number: 1 (lower is better)
Translates to: KLNGTSRCAKGWPHG*GADNGVGTWVLWSL
Trigger: CAGGGACCATAGGACCCAGGTTCCAACCCCATTGTCAGCACCCCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR TCA 90 bp CTATACATTCTTGTCCCCCTCCCACAGGGCTCTCAATGGCTGGTCTaGGAAGCCAGCCAGTGCCAAGAATGGAGCATTCTCTCTGAGAGG +
Preference number: 1 (lower is better)
Translates to: LYILVPLPQGSQWLV*EASQCQEWSILSER
Trigger: CCTCTCAGAGAGAATGCTCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGAGGGGGACAAGAATGTATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR CCA 90 bp TCTCCCTATACATTCTTGTCCCCCTCCCACAGGGCTCTCAATGGCTaGTCTGAGAAGCCAGCCAGTGCCAAGAATGGAGCATTCTCTCTG +
Preference number: 1 (lower is better)
Translates to: SPYTFLSPSHRALNG*SEKPASAKNGAFSL
Trigger: CAGAGAGAATGCTCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGAGGGGGACAAGAATGTATAGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR TCA 90 bp GCTGGTCTGAGAAGCCAGCCAGTGCCAAGAATGGAGCATTCTCTCTaGGAGGGGAGTCTTAGGGGAAATGTTTATGAGGTCAGGGATGGG +
Preference number: 1 (lower is better)
Translates to: AGLRSQPVPRMEHSL*EGSLRGNVYEVRDG
Trigger: CCCATCCCTGACCTCATAAACATTTCCCCTAAGACTCCCCTCTCAGAGAGAATGCTCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR TCA 90 bp GGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTaGCTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCCCCCTCC +
Preference number: 1 (lower is better)
Translates to: GPSILNPSHLLGPIH*LRPKISPYTFLSPS
Trigger: GGAGGGGGACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR TCA 90 bp TGTGGTAGCAGACCTGTGGAACTTGGAGCTATAACCTGGTATGCCTaGGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGC +
Preference number: 1 (lower is better)
Translates to: CGSRPVELGAITWYA*AIIICPGPSILNPS
Trigger: GCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAGGCATACCAGGTTATAGCTCCAAGTTCCACAGGTCTGCTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGCTGGGAAGAGAAGGGTaGGGTCCGCCTGGACTAGGG +
Preference number: 2 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRLGREG*GPPGLG
Trigger: CCCTAGTCCAGGCGGACCTCACCCTTCTCTTCCCAG...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
3UTR-3UTR TCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGCTGGGAAGAGAAGGGTaGGGTCCGCCTGGACTAGGG +
Preference number: 2 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWLGREG*GPPGLG
Trigger: CCCTAGTCCAGGCGGACCTCACCCTTCTCTTCCCAG...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGGGGCACTCTCAACACTaGGTGTCAGGCAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWGHSQH*VSGRKG
Trigger: CCCCTTCCTGCCTGACACCCAGTGTTGAGAGTGCCC...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp TCCCACAGGGCTCTCAATGGCTGGTCTGAGAAGCCAGCCAGTGCCAAGAATGGACTGGGAAGAGAAGGGTaGGGTCCGCCTGGACTAGGG +
Preference number: 2 (lower is better)
Translates to: SHRALNGWSEKPASAKNGLGREG*GPPGLG
Trigger: CCCTAGTCCAGGCGGACCTCACCCTTCTCTTCCCAG...TCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGGAGACCCTAGGGAACTaGGGAGGTTATCTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWETLGN*GGYLGW
Trigger: CCACCCCAGATAACCTCCTCAGTTCCCTAGGGTCTC...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGGGAACCTGGGTCCTATaGTCCCTGCCCTCTAGGTGT +
Preference number: 2 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWGTWVL*SLPSRC
Trigger: ACACCTAGAGGGCAGGGACCATAGGACCCAGGTTCC...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGTGAGGTCCGCCTaGACTAGGGTTAGAGCATGG +
Preference number: 2 (lower is better)
Translates to: APEIWTTESPSSWIPPAPRVRSA*TRVRAW
Trigger: CCATGCTCTAACCCTAGTCCAGGCGGACCTCACCCT...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
3UTR-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGAGGGCTCTCAATGGCTaGTCTGAGAAGCCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWRALNG*SEKPAS
Trigger: ACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCT...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGATGGAGCATTCTCTCTaGGAGGGGAGTCTTAGGGGA +
Preference number: 2 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWMEHSL*EGSLRG
Trigger: TCCCCTAAGACTCCCCTCTCAGAGAGAATGCTCCAT...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGGCAAGGAGGGTGGGATaGAATTTTGGCAGGCATCAG +
Preference number: 2 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWARRVG*NFGRHQ
Trigger: CTGATGCCTGCCAAAATTTCATCCCACCCTCCTTGC...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAAGGGTGAGGTCCGCCTaGACTAGGGTTAGAGCATGG +
Preference number: 2 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPRVRSA*TRVRAW
Trigger: CCATGCTCTAACCCTAGTCCAGGCGGACCTCACCCT...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
3UTR-3UTR CCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCGAAGGGGGTGAGAGCTaGTGGGAGTTGGGAACACCC +
Preference number: 2 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSEGGES*WELGTP
Trigger: GGGTGTTCCCAACTCCCACCAGCTCTCACCCCCTTC...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCGGGCACTCTCAACACTaGGTGTCAGGCAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSGHSQH*VSGRKG
Trigger: CCCCTTCCTGCCTGACACCCAGTGTTGAGAGTGCCC...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR GCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTCCCCGAGATGCACTCTaGCCACTCTCTGGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPPRDAL*PLSGPF
Trigger: GAAGGGGCCAGAGAGTGGGCAGAGTGCATCTCGGGG...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGAAGGGTGAGGTCCGCCTaGACTAGGGTTAGAGCATGG +
Preference number: 2 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGRVRSA*TRVRAW
Trigger: CCATGCTCTAACCCTAGTCCAGGCGGACCTCACCCT...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGTCAGCTCCAGAGATCTaGACTACTGAATCCCCAAGC +
Preference number: 2 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWSAPEI*TTESPS
Trigger: GCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp TCCACTGTGGGGAGTGATAGGCCCCAAGTTCAGGAAGGTCCCAAGTCTATAGAGGAAGGGGGTGAGAGCTaGTGGGAGTTGGGAACACCC +
Preference number: 2 (lower is better)
Translates to: STVGSDRPQVQEGPKSIEEGGES*WELGTP
Trigger: GGGTGTTCCCAACTCCCACCAGCTCTCACCCCCTTC...CTCTATAGACTTGGGACCTTCCTGAACTTGGGGCCTATCACTCCCCACAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATGCCCCCACACTGGGTTCGGGCACTCTCAACACTaGGTGTCAGGCAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: WGEPRLIEDSSECPHTGFGHSQH*VSGRKG
Trigger: CCCCTTCCTGCCTGACACCCAGTGTTGAGAGTGCCC...GAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGGCCCCAGGCTCTCCATaGATACCGAGGAGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: ASLGRLSQARRDPRELRRAPGSP*IPRRVW
Trigger: CCACACCCTCCTCGGTATCCATGGAGAGCCTGGGGC...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGAGAGATCTGGACTACTaGATCCCCAAGCTCTTGGAT +
Preference number: 2 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWRDLDY*IPKLLD
Trigger: ATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCT...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCAGGGCTCTCAATGGCTaGTCTGAGAAGCCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSRALNG*SEKPAS
Trigger: ACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCT...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGGTGAGGTCCGCCTaGACTAGGGTTAGAGCATGG +
Preference number: 2 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPRVRSA*TRVRAW
Trigger: CCATGCTCTAACCCTAGTCCAGGCGGACCTCACCCT...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATCTGGGAAGAGAAGGGTaGGGTCCGCCTGGACTAGGG +
Preference number: 2 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDLGREG*GPPGLG
Trigger: CCCTAGTCCAGGCGGACCTCACCCTTCTCTTCCCAG...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATGCCCCCACACTGGGTTCAAGCAATGCCAGAGATaGGCCAGATATCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: WGEPRLIEDSSECPHTGFKQCQR*ARYLAP
Trigger: TGGGGCCAGATATCTGGCTCATCTCTGGCATTGCTT...GAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR GCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATCCCCGAGATGCACTCTaGCCACTCTCTGGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDPRDAL*PLSGPF
Trigger: GAAGGGGCCAGAGAGTGGGCAGAGTGCATCTCGGGG...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR CAA 90 bp AGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATaGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: RPFYSQPQPPPRTYP*TQAQDFSLYILVPL
Trigger: GAGGGGGACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp TCCACTGTGGGGAGTGATAGGCCCCAAGTTCAGGAAGGTCCCAAGTCTATAGAGTGGAAACTTATATTTTaGTGGCCTGTGGTAGCAGAC +
Preference number: 2 (lower is better)
Translates to: STVGSDRPQVQEGPKSIEWKLIF*WPVVAD
Trigger: GTCTGCTACCACAGGCCATCAAAATATAAGTTTCCA...CTCTATAGACTTGGGACCTTCCTGAACTTGGGGCCTATCACTCCCCACAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR TCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATAAGCAATGCCAGAGATaGGCCAGATATCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDKQCQR*ARYLAP
Trigger: TGGGGCCAGATATCTGGCTCATCTCTGGCATTGCTT...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp CCATGGATACCGAGGAGGGTGTGGAAAATTTCTGGGGCATTTCTAAGGAGACAACAGACCTGTGGAACTTaGAGCTATAACCTGGTATGC +
Preference number: 2 (lower is better)
Translates to: PWIPRRVWKISGAFLRRQQTCGT*SYNLVC
Trigger: GCATACCAGGTTATAGCTCCAAGTTCCACAGGTCTG...TTGTCTCCTTAGAAATGCCCCAGAAATTTTCCACACCCTCCTCGGTATCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CCA 90 bp ATGGGAAACAAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGTGGGATGAAATTTTaGCAGGCATCAGCCAGGACA +
Preference number: 2 (lower is better)
Translates to: MGNKNSSHSPQNRDDKQGGGMKF*QASART
Trigger: TGTCCTGGCTGATGCCTGCCAAAATTTCATCCCACC...TCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTTGTTTCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR CAA 90 bp TTTCTAAGGAGACAAGGTCTTCTGCAAAGCCTGGAAACTTATATTTaGATGGCCTGTGGTAGCAGACCTGTGGAACTTGGAGCTATAACC +
Preference number: 2 (lower is better)
Translates to: FLRRQGLLQSLETYI*MACGSRPVELGAIT
Trigger: GGTTATAGCTCCAAGTTCCACAGGTCTGCTACCACAGGCCATCAAAATATAAGTTTCCAGGCTTTGCAGAAGACCTTGTCTCCTTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR CCA 72 bp GGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTaGGGTGCTGACAATGGGGTTGGAACCTGGGTCCTA +
Preference number: 3 (lower is better)
Translates to: GTSRCAKGWPHG*GADNGVGTWVL
Trigger: TAGGACCCAGGTTCCAACCCCATTGTCAGCACCCCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR CCA 72 bp ACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTaGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: TAQFLQEGHSQH*VSGRKGVRAGG
Trigger: CCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR CCA 72 bp CCGCATGGCTGGGGTGCTGACAATGGGGTTGGAACCTaGGTCCTATGGTCCCTGCCCTCTAGGTGTGCTAAG +
Preference number: 3 (lower is better)
Translates to: PHGWGADNGVGT*VLWSLPSRCAK
Trigger: CTTAGCACACCTAGAGGGCAGGGACCATAGGACCCAGGTTCCAACCCCATTGTCAGCACCCCAGCCATGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR CCA 72 bp GCTCTCTGGGGGCTCTCCCCTCAGATTCTGGCCAACTaGGAGGGTAAGCTAAATGGGACGAGCAGGTGTGCT +
Preference number: 3 (lower is better)
Translates to: ALWGLSPQILAN*EGKLNGTSRCA
Trigger: AGCACACCTGCTCGTCCCATTTAGCTTACCCTCCCAGTTGGCCAGAATCTGAGGGGAGAGCCCCCAGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR TCA 72 bp CTTGTCCCCCTCCCACAGGGCTCTCAATGGCTGGTCTaGGAAGCCAGCCAGTGCCAAGAATGGAGCATTCTC +
Preference number: 3 (lower is better)
Translates to: LVPLPQGSQWLV*EASQCQEWSIL
Trigger: GAGAATGCTCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGAGGGGGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR CCA 72 bp ACATTCTTGTCCCCCTCCCACAGGGCTCTCAATGGCTaGTCTGAGAAGCCAGCCAGTGCCAAGAATGGAGCA +
Preference number: 3 (lower is better)
Translates to: TFLSPSHRALNG*SEKPASAKNGA
Trigger: TGCTCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGAGGGGGACAAGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR GCA 72 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATaGCCCCACACTGGGTTCAGATGCTATGCCTGCCTC +
Preference number: 3 (lower is better)
Translates to: WGEPRLIEDSSE*PHTGFRCYACL
Trigger: GAGGCAGGCATAGCATCTGAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR TCA 72 bp AGAAGCCAGCCAGTGCCAAGAATGGAGCATTCTCTCTaGGAGGGGAGTCTTAGGGGAAATGTTTATGAGGTC +
Preference number: 3 (lower is better)
Translates to: RSQPVPRMEHSL*EGSLRGNVYEV
Trigger: GACCTCATAAACATTTCCCCTAAGACTCCCCTCTCAGAGAGAATGCTCCATTCTTGGCACTGGCTGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR TCA 72 bp ATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTaGCTCAGGCCCAAGATTTCTCCCTATACATTCTTG +
Preference number: 3 (lower is better)
Translates to: ILNPSHLLGPIH*LRPKISPYTFL
Trigger: CAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
3UTR-3UTR CAA 90 bp ATGGGAAACAAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATGAAATTTaGGCAGGCATCAGCCAGGAC +
Preference number: 3 (lower is better)
Translates to: MGNKNSSHSPQNRDDKQGGWDEI*AGISQD
Trigger: GTCCTGGCTGATGCCTGCCAAAATTTCATCCCACCC...TCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTTGTTTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGACTGAGGGCAGGGCTTaGGGCCCGCAGCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRTEGRA*GPQHGS
Trigger: GCTGCCGTGCTGCGGGCCCCAAGCCCTGCCCTCAGT...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGTCACACGGCGCCCCCTaGCGGCCTACTGTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWSHGAP*RPTVLS
Trigger: CGACAGCACAGTAGGCCGCCAGGGGGCGCCGTGTGA...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGGTTTGCTCCTGCAGCTaGTCCAGACCCTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRVCSCS*SRPSGR
Trigger: CCGGCCTGAGGGTCTGGAGCAGCTGCAGGAGCAAAC...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR GCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGGGCCTCCTCCCGGAGTaGAGGGTACGTGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRGLLPE*RVRVLA
Trigger: GGCAAGTACACGTACCCTGCACTCCGGGAGGAGGCC...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR GCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCGGAGCCGAGCCGAGCTaGCTCTCTCCTCCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPAGAEPS*LSPPAP
Trigger: GGGGGCGGGAGGAGAGAGGCAGCTCGGCTCGGCTCC...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358038.7
CDS-3UTR GCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCAGGGATCGCGCTGCCTaGCCCAGCGGGCTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPARDRAA*PSGLRH
Trigger: GTGCCGGAGCCCGCTGGGGCAGGCAGCGCGATCCCT...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348850.9
CDS-3UTR CCA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGTCACACGGCGCCCCCTaGCGGCCTACTGTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGSHGAP*RPTVLS
Trigger: CGACAGCACAGTAGGCCGCCAGGGGGCGCCGTGTGA...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGGGAGGTTATCTGGGGTaGGGTGGGGAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRGGYLG*GGESPG
Trigger: ACCTGGGCTCTCCCCACCCCACCCCAGATAACCTCC...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCCGTCCACGCTGTCCGTaGGCTGGTCGTAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPRPRCP*AGRRSR
Trigger: ACGGCTCCTACGACCAGCTCACGGACAGCGTGGACG...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370046.5
CDS-3UTR GCA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGGTTTGCTCCTGCAGCTaGTCCAGACCCTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMVCSCS*SRPSGR
Trigger: CCGGCCTGAGGGTCTGGAGCAGCTGCAGGAGCAAAC...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR GCA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGGGCCTCCTCCCGGAGTaGAGGGTACGTGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMGLLPE*RVRVLA
Trigger: GGCAAGTACACGTACCCTGCACTCCGGGAGGAGGCC...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR GCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCCGGACAAACTCTCCTTaGGGCCCTGGCCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPRTNSP*GPGPAW
Trigger: CCATGCGGGGCCAGGGCCGCAAGGAGAGTTTGTCCG...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR GCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCGTAGAGGGATCGCGCTaGCTGCCCCAGCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSVEGSR*LPQRAP
Trigger: CGGAGCCCGCTGGGGCAGGCAGCGCGATCCCTCTAC...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348850.9
CDS-3UTR CCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGGAAGGGGGTGAGAGCTaGTGGGAGTTGGGAACACCC +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMREGGES*WELGTP
Trigger: GGGTGTTCCCAACTCCCACCAGCTCTCACCCCCTTC...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGGGGCACTCTCAACACTaGGTGTCAGGCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRGHSQH*VSGRKG
Trigger: CCCCTTCCTGCCTGACACCCAGTGTTGAGAGTGCCC...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGGCCCCAGGCTCTCCATaGATACCGAGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWAPGSP*IPRRVW
Trigger: CCACACCCTCCTCGGTATCCATGGAGAGCCTGGGGC...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGGGGTGGCCGCATGGCTaGGGTGCTGACAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWGWPHG*GADNGV
Trigger: AACCCCATTGTCAGCACCCCAGCCATGCGGCCACCC...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGGGGTGGCCGCATGGCTaGGGTGCTGACAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMGWPHG*GADNGV
Trigger: AACCCCATTGTCAGCACCCCAGCCATGCGGCCACCC...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGAGGTGTGCTAAGGGGTaGCCGCATGGCTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWRCAKG*PHGWGA
Trigger: AGCACCCCAGCCATGCGGCCACCCCTTAGCACACCT...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGAGCACGGCAGCAGCTTaGGGAATCGCTGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWSTAAA*GIAASA
Trigger: CGCTGAAGCAGCGATTCCTCAAGCTGCTGCCGTGCT...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGCTGGGAAGAGAAGGGTaGGGTCCGCCTGGACTAGGG +
Preference number: 4 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVLGREG*GPPGLG
Trigger: CCCTAGTCCAGGCGGACCTCACCCTTCTCTTCCCAG...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGGCATGGCTGGGGTGCTaGCAATGGGGTTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWAWLGC*QWGWNL
Trigger: CAGGTTCCAACCCCATTGTCAGCACCCCAGCCATGC...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAAT +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRPRYRT*NSLRVN
Trigger: ATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGG...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCTCACACGGCGCCCCCTaGCGGCCTACTGTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPASHGAP*RPTVLS
Trigger: CGACAGCACAGTAGGCCGCCAGGGGGCGCCGTGTGA...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGAGGGTGAGGTCCGCCTaGACTAGGGTTAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRRVRSA*TRVRAW
Trigger: CCATGCTCTAACCCTAGTCCAGGCGGACCTCACCCT...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGGAAGGGGGTGAGAGCTaGTGGGAGTTGGGAACACCC +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWEGGES*WELGTP
Trigger: GGGTGTTCCCAACTCCCACCAGCTCTCACCCCCTTC...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGGGGCACTCTCAACACTaGGTGTCAGGCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWGHSQH*VSGRKG
Trigger: CCCCTTCCTGCCTGACACCCAGTGTTGAGAGTGCCC...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGGGAACCTGGGTCCTATaGTCCCTGCCCTCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRGTWVL*SLPSRC
Trigger: ACACCTAGAGGGCAGGGACCATAGGACCCAGGTTCC...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGAATGGGGTTGGAACCTaGGTCCTATGGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRNGVGT*VLWSLP
Trigger: GGGCAGGGACCATAGGACCCAGGTTCCAACCCCATT...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGAATGGGGTTGGAACCTaGGTCCTATGGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRNGVGT*VLWSLP
Trigger: GGGCAGGGACCATAGGACCCAGGTTCCAACCCCATT...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGCACGGCAGCAGCTTaGGGAATCGCTGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPSTAAA*GIAASA
Trigger: CGCTGAAGCAGCGATTCCTCAAGCTGCTGCCGTGCT...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGCAGTCAACAGTCTTCTaGTGGGGAAGGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRQSTVF*WGRGLS
Trigger: AGAGAGCCCCCTTCCCCATCAGAAGACTGTTGACTG...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGTTTGCTCCTGCAGCTaGTCCAGACCCTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPVCSCS*SRPSGR
Trigger: CCGGCCTGAGGGTCTGGAGCAGCTGCAGGAGCAAAC...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR GCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAAT +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWPRYRT*NSLRVN
Trigger: ATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGG...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCTGGCGGCCTACTGTaGTGTCGGGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPAPGGLL*CRGWGS
Trigger: ACTTCCCCAGCCCCGACAGCACAGTAGGCCGCCAGG...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR GCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCGGACAAACTCTCCTTaGGGCCCTGGCCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSRTNSP*GPGPAW
Trigger: CCATGCGGGGCCAGGGCCGCAAGGAGAGTTTGTCCG...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CTGCCCACTCTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAACCCCGAGATGCACTCTaGCCACTCTCTGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPTLWPLQLQRSGLLNPQPRDAL*PLSGPF
Trigger: GAAGGGGCCAGAGAGTGGGCAGAGTGCATCTCGGGG...TTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAGAGTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp TCCCACAGGGCTCTCAATGGCTGGTCTGAGAAGCCAGCCAGTGCCAAGAATGGACCCCGAGATGCACTCTaGCCACTCTCTGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SHRALNGWSEKPASAKNGPRDAL*PLSGPF
Trigger: GAAGGGGCCAGAGAGTGGGCAGAGTGCATCTCGGGG...TCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGCACACTGGGTTCAGATaGTATGCCTGCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRHTGFR*YACLPP
Trigger: AGGAGGGAGGCAGGCATAGCATCTGAACCCAGTGTG...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGGAAGGGGGTGAGAGCTaGTGGGAGTTGGGAACACCC +
Preference number: 4 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGEGGES*WELGTP
Trigger: GGGTGTTCCCAACTCCCACCAGCTCTCACCCCCTTC...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGAGGGCTCTCAATGGCTaGTCTGAGAAGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRRALNG*SEKPAS
Trigger: ACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCT...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGAGGTTATCTGGGGTaGGGTGGGGAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPGGYLG*GGESPG
Trigger: ACCTGGGCTCTCCCCACCCCACCCCAGATAACCTCC...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGCATCGGTTCATGGTTTaGCGGCGAGCTCGGCGTCTA +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWHRFMV*RRARRL
Trigger: TAGACGCCGAGCTCGCCGCCAAACCATGAACCGATG...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348850.9
CDS-3UTR TCA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGACCCTCAGGCCGGTaGCACACGGTGGACAATTCA +
Preference number: 4 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGRPSGR*HTVDNS
Trigger: TGAATTGTCCACCGTGTGTCACCGGCCTGAGGGTCT...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGTGGGACATTCGTTCTTaGAGCCCCGGTACAGGACCT +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWWDIRS*SPGTGP
Trigger: AGGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCA...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGCTCCTGGGGGCTAGATaGCATTGTCAAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRLLGAR*HCQRAA
Trigger: TGCAGCTCTTTGACAATGTCATCTAGCCCCCAGGAG...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCGAGACCCTAGGGAACTaGGGAGGTTATCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPETLGN*GGYLGW
Trigger: CCACCCCAGATAACCTCCTCAGTTCCCTAGGGTCTC...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGGAGACCCTAGGGAACTaGGGAGGTTATCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGETLGN*GGYLGW
Trigger: CCACCCCAGATAACCTCCTCAGTTCCCTAGGGTCTC...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCGGGTCCTATGGTCCCTaGCCTCTAGGTGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPGSYGP*PLGVLR
Trigger: CCTTAGCACACCTAGAGGGCAGGGACCATAGGACCC...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGTCTACCCGGAGGTCCTaGAGCAGGAGAGGGAACACT +
Preference number: 4 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGSTRRS*SRRGNT
Trigger: AGTGTTCCCTCTCCTGCTCCAGGACCTCCGGGTAGA...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGCTAAGGCATCCACTGTaGGGAGTGATAGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWLRHPL*GVIGPK
Trigger: CTTGGGGCCTATCACTCCCCACAGTGGATGCCTTAG...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCCACTGTGGGGAGTGATAGGCCCCAAGTTCAGGAAGGTCCCAAGTCTATAGAGGGGGGCATCGGTTCATaGTTTGGCGGCGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: STVGSDRPQVQEGPKSIEGGIGS*FGGELG
Trigger: GCCGAGCTCGCCGCCAAACCATGAACCGATGCCCCC...CTCTATAGACTTGGGACCTTCCTGAACTTGGGGCCTATCACTCCCCACAGTGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000348850.9
CDS-3UTR TCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGGCAACTCCTTGCGCGTaGATTTGGTTTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWATPCA*IWFAPA
Trigger: TGCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGC...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGTGGGACATTCGTTCTTaGAGCCCCGGTACAGGACCT +
Preference number: 4 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGWDIRS*SPGTGP
Trigger: AGGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCA...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGCTCCTGGGGGCTAGATaGCATTGTCAAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMLLGAR*HCQRAA
Trigger: TGCAGCTCTTTGACAATGTCATCTAGCCCCCAGGAG...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGATGGAGCATTCTCTCTaGGAGGGGAGTCTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMMEHSL*EGSLRG
Trigger: TCCCCTAAGACTCCCCTCTCAGAGAGAATGCTCCAT...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGAAGCAATGCCAGAGATaGGCCAGATATCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWKQCQR*ARYLAP
Trigger: TGGGGCCAGATATCTGGCTCATCTCTGGCATTGCTT...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGAGCATGGCTGGGGTGCTaGCAATGGGGTTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGAWLGC*QWGWNL
Trigger: CAGGTTCCAACCCCATTGTCAGCACCCCAGCCATGC...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGCGCGTGAATTTGGTTTaGTCCTGCAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWRVNLV*SCSCSR
Trigger: TCTGGAGCAGCTGCAGGAGCAAACCAAATTCACGCG...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGCGCGTGAATTTGGTTTaGTCCTGCAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWRVNLV*SCSCSR
Trigger: TCTGGAGCAGCTGCAGGAGCAAACCAAATTCACGCG...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp TCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTGACTGGCCTCCTCCCGGAGTaGAGGGTACGTGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: SRPFYSQPQPPPRTYPLTGLLPE*RVRVLA
Trigger: GGCAAGTACACGTACCCTGCACTCCGGGAGGAGGCC...AGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGCGGACAAACTCTCCTTaGGGCCCTGGCCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: ASLGRLSQARRDPRELRRRTNSP*GPGPAW
Trigger: CCATGCGGGGCCAGGGCCGCAAGGAGAGTTTGTCCG...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGTCCTATGGTCCCTaGCCTCTAGGTGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPGSYGP*PLGVLR
Trigger: CCTTAGCACACCTAGAGGGCAGGGACCATAGGACCC...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCACTGACCCCCTCTCCTaGGGGCTAGATGACATTGTC +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPTDPLS*GLDDIV
Trigger: GACAATGTCATCTAGCCCCCAGGAGAGGGGGTCAGT...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGAGGGCACTCTCAACACTaGGTGTCAGGCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGGHSQH*VSGRKG
Trigger: CCCCTTCCTGCCTGACACCCAGTGTTGAGAGTGCCC...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAAATGGGGTTGGAACCTaGGTCCTATGGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPNGVGT*VLWSLP
Trigger: GGGCAGGGACCATAGGACCCAGGTTCCAACCCCATT...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCCACTGTGGGGAGTGATAGGCCCCAAGTTCAGGAAGGTCCCAAGTCTATAGAGGGGTGGCCGCATGGCTaGGGTGCTGACAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: STVGSDRPQVQEGPKSIEGWPHG*GADNGV
Trigger: AACCCCATTGTCAGCACCCCAGCCATGCGGCCACCC...CTCTATAGACTTGGGACCTTCCTGAACTTGGGGCCTATCACTCCCCACAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATGCCCCCACACTGGGTTCAGGTGTGCTAAGGGGTaGCCGCATGGCTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: WGEPRLIEDSSECPHTGFRCAKG*PHGWGA
Trigger: AGCACCCCAGCCATGCGGCCACCCCTTAGCACACCT...GAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCATGGGACATTCGTTCTTaGAGCCCCGGTACAGGACCT +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPWDIRS*SPGTGP
Trigger: AGGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCA...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGGCATTTCCTCAAAACTaGCCGAGCCATCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMAFPQN*PSHHGW
Trigger: CCAACCATGATGGCTCGGTCAGTTTTGAGGAAATGC...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370046.5
CDS-3UTR TCA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGCAAAGTCCTCAAAACTaGCCGAGCCATCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMQSPQN*PSHHGW
Trigger: CCAACCATGATGGCTCGGTCAGTTTTGAGGACTTTG...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTCTGGGAAGAGAAGGGTaGGGTCCGCCTGGACTAGGG +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPLGREG*GPPGLG
Trigger: CCCTAGTCCAGGCGGACCTCACCCTTCTCTTCCCAG...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGAGAGATCTGGACTACTaGATCCCCAAGCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRRDLDY*IPKLLD
Trigger: ATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCT...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCGAGACCCTAGGGAACTaGGGAGGTTATCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSETLGN*GGYLGW
Trigger: CCACCCCAGATAACCTCCTCAGTTCCCTAGGGTCTC...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCGGCTAATGTTTCACTaGCTGAGGGCAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPARLMFH*LRAGLG
Trigger: CCCAAGCCCTGCCCTCAGTCAGTGAAACATTAGCCG...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356640.7
CDS-3UTR GCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAAT +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSPRYRT*NSLRVN
Trigger: ATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGG...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGGAAAAGTGGCATAGGTaGTGGAGTCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMREKWHR*WSLLEE
Trigger: TTCCTCAAGGAGACTCCAGCACCTATGCCACTTTTC...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGGCCGGTGACACACGGTaGACAATTCAAATTCATCGT +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRAGDTR*TIQIHR
Trigger: ACGATGAATTTGAATTGTCCACCGTGTGTCACCGGC...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGGCCGGTGACACACGGTaGACAATTCAAATTCATCGT +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRAGDTR*TIQIHR
Trigger: ACGATGAATTTGAATTGTCCACCGTGTGTCACCGGC...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCACTGAGGGCAGGGCTTaGGGCCCGCAGCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVTEGRA*GPQHGS
Trigger: GCTGCCGTGCTGCGGGCCCCAAGCCCTGCCCTCAGT...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCCCACAGGGCTCTCAATGGCTGGTCTGAGAAGCCAGCCAGTGCCAAGAATGGAACTGACCCCCTCTCCTaGGGGCTAGATGACATTGTC +
Preference number: 4 (lower is better)
Translates to: SHRALNGWSEKPASAKNGTDPLS*GLDDIV
Trigger: GACAATGTCATCTAGCCCCCAGGAGAGGGGGTCAGT...TCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTGCCCCAGGCTCTCCATaGATACCGAGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPAPGSP*IPRRVW
Trigger: CCACACCCTCCTCGGTATCCATGGAGAGCCTGGGGC...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTGCCCACTCTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGATGAGCCAGATATCTaGCCCCAGGCTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: LPTLWPLQLQRSGLLNPQDEPDI*PQALHG
Trigger: TCCATGGAGAGCCTGGGGCCAGATATCTGGCTCATC...TTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAGAGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCACTAAGGCATCCACTGTaGGGAGTGATAGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPLRHPL*GVIGPK
Trigger: CTTGGGGCCTATCACTCCCCACAGTGGATGCCTTAG...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGAGGAACCTGGGTCCTATaGTCCCTGCCCTCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGGTWVL*SLPSRC
Trigger: ACACCTAGAGGGCAGGGACCATAGGACCCAGGTTCC...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGTGTGCTAAGGGGTaGCCGCATGGCTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPRCAKG*PHGWGA
Trigger: AGCACCCCAGCCATGCGGCCACCCCTTAGCACACCT...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGATCGTCCACGCTGTCTaGGTCCAGCAGGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASLGRLSQARRDPRELRRIVHAV*VQQAGS
Trigger: AGACCCCGCCTGCTGGACCCAGACAGCGTGGACGAT...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356640.7
CDS-3UTR TCA 90 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATGCCCCCACACTGGGTTCAGACCCTCAGGCCGGTaGCACACGGTGGACAATTCA +
Preference number: 4 (lower is better)
Translates to: WGEPRLIEDSSECPHTGFRPSGR*HTVDNS
Trigger: TGAATTGTCCACCGTGTGTCACCGGCCTGAGGGTCT...GAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCTGGGACATTCGTTCTTaGAGCCCCGGTACAGGACCT +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPAWDIRS*SPGTGP
Trigger: AGGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCA...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCCTGGAGGGTGGCCCGTaGGCTGGTCGTAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVLEGGP*AGRRSR
Trigger: ACGGCTCCTACGACCAGCTCACGGGCCACCCTCCAG...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTCCACGCTGTTTTCACTaGCTGAGGGCAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPPRCFH*LRAGLG
Trigger: CCCAAGCCCTGCCCTCAGTCAGTGAAAACAGCGTGG...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358038.7
CDS-3UTR TCA 90 bp TCCCACAGGGCTCTCAATGGCTGGTCTGAGAAGCCAGCCAGTGCCAAGAATGGAATGGAGCATTCTCTCTaGGAGGGGAGTCTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SHRALNGWSEKPASAKNGMEHSL*EGSLRG
Trigger: TCCCCTAAGACTCCCCTCTCAGAGAGAATGCTCCAT...TCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCTCTCAATGGCTGGTCTaGGAAGCCAGCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSSQWLV*EASQCQ
Trigger: TTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGA...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGCTAGGACCTATCCATTaGCTCAGGCCCAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWLGPIH*LRPKIS
Trigger: AGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAG...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp TCCCACAGGGCTCTCAATGGCTGGTCTGAGAAGCCAGCCAGTGCCAAGAATGGAGCAAGGAGGGTGGGATaGAATTTTGGCAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SHRALNGWSEKPASAKNGARRVG*NFGRHQ
Trigger: CTGATGCCTGCCAAAATTTCATCCCACCCTCCTTGC...TCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGGGGGAGAGCCCAGGTTaGTTGAAGATTCTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMGESPG*LKILVN
Trigger: ATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCC...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGGGGGAGAGCCCAGGTTaGTTGAAGATTCTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWGESPG*LKILVN
Trigger: ATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCC...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCAGTCAACAGTCTTCTaGTGGGGAAGGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSQSTVF*WGRGLS
Trigger: AGAGAGCCCCCTTCCCCATCAGAAGACTGTTGACTG...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp TCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAAT +
Preference number: 4 (lower is better)
Translates to: SRPFYSQPQPPPRTYPLTPRYRT*NSLRVN
Trigger: ATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGG...AGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGGAAAAGTGGCATAGGTaGTGGAGTCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMEKWHR*WSLLEE
Trigger: TTCCTCAAGGAGACTCCAGCACCTATGCCACTTTTC...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR GCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCACCACCACCAACACATaGAGGAAGGAAGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPTTTNT*RKEGEE
Trigger: TTCCTCTCCTTCCTTCCTGCATGTGTTGGTGGTGGT...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGACCACCACCAACACATaGAGGAAGGAAGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVTTTNT*RKEGEE
Trigger: TTCCTCTCCTTCCTTCCTGCATGTGTTGGTGGTGGT...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGGCCGGTGACACACGGTaGACAATTCAAATTCATCGT +
Preference number: 4 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWAGDTR*TIQIHR
Trigger: ACGATGAATTTGAATTGTCCACCGTGTGTCACCGGC...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGTTTCTGTCCATCTTCTaGAAGAAGCTCTCCACGTGT +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRFLSIF*KKLSTC
Trigger: ACACGTGGAGAGCTTCTTCCAGAAGATGGACAGAAA...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp ATGGGAAACAAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGATGGCGCTGCCGGGATTaGCTCCCCCTACCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: MGNKNSSHSPQNRDDKQGWRCRD*LPLPPP
Trigger: GGGCGGGGGTAGGGGGAGCCAATCCCGGCAGCGCCA...TCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTTGTTTCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000358038.7
CDS-3UTR CCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCACTGACCCCCTCTCCTaGGGGCTAGATGACATTGTC +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPATDPLS*GLDDIV
Trigger: GACAATGTCATCTAGCCCCCAGGAGAGGGGGTCAGT...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATGCCCCCACACTGGGTTCAGGGTGAGGTCCGCCTaGACTAGGGTTAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: WGEPRLIEDSSECPHTGFRVRSA*TRVRAW
Trigger: CCATGCTCTAACCCTAGTCCAGGCGGACCTCACCCT...GAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTGACTAGGGTGAGGTCCGCCTaGACTAGGGTTAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: SRPFYSQPQPPPRTYPLTRVRSA*TRVRAW
Trigger: CCATGCTCTAACCCTAGTCCAGGCGGACCTCACCCT...AGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAAGTAGGGGTAGGAGGTaGGGAACCGCTCAATTCCTA +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPSRGRR*GTAQFL
Trigger: TAGGAATTGAGCGGTTCCCCACCTCCTACCCCTACT...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGAGATGAGCCAGATATCTaGCCCCAGGCTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGDEPDI*PQALHG
Trigger: TCCATGGAGAGCCTGGGGCCAGATATCTGGCTCATC...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCGGTGGGATGAAATTTTaGCAGGCATCAGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPGGMKF*QASART
Trigger: TGTCCTGGCTGATGCCTGCCAAAATTTCATCCCACC...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTGACTGGAACCTGGGTCCTATaGTCCCTGCCCTCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: SRPFYSQPQPPPRTYPLTGTWVL*SLPSRC
Trigger: ACACCTAGAGGGCAGGGACCATAGGACCCAGGTTCC...AGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGCAGATTCTGGCCAACTaGGAGGGTAAGCTAAATGGG +
Preference number: 4 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVQILAN*EGKLNG
Trigger: CCCATTTAGCTTACCCTCCCAGTTGGCCAGAATCTG...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCACAAAGTCCTCAAAACTaGCCGAGCCATCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPQSPQN*PSHHGW
Trigger: CCAACCATGATGGCTCGGTCAGTTTTGAGGACTTTG...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGAGAGATCTGGACTACTaGATCCCCAAGCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVRDLDY*IPKLLD
Trigger: ATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCT...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGCATCTCTGGGTAGATTaGGTCAAGCAAGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVHLWVD*VKQEET
Trigger: GGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATG...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCCATCTCTGGGTAGATTaGGTCAAGCAAGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPHLWVD*VKQEET
Trigger: GGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATG...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCCCTGGCGGCCTACTGTaGTGTCGGGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVPGGLL*CRGWGS
Trigger: ACTTCCCCAGCCCCGACAGCACAGTAGGCCGCCAGG...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCGAAGATTCTAGTGAATaGCCCCACACTGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPEDSSE*PHTGFR
Trigger: TCTGAACCCAGTGTGGGGGCATTCACTAGAATCTTC...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAAGTGGCATAGGTGCTaGAGTCTCCTTGAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPKWHRC*SLLEER
Trigger: TCTTTCCTCAAGGAGACTCCAGCACCTATGCCACTT...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp CTGCCCACTCTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAACTGACCGAGCCATCATaGTTGGTGTCAAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: LPTLWPLQLQRSGLLNPQLTEPS*LVSKAL
Trigger: CAATGCCTTTGACACCAACCATGATGGCTCGGTCAG...TTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAGAGTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGTTTCTGTCCATCTTCTaGAAGAAGCTCTCCACGTGT +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWFLSIF*KKLSTC
Trigger: ACACGTGGAGAGCTTCTTCCAGAAGATGGACAGAAA...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATGCCTCCTCCCCTCTTTaGCGCTGCCGGGATTGGCTC +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDASSPL*RCRDWL
Trigger: GAGCCAATCCCGGCAGCGCCAAAGAGGGGAGGAGGC...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358038.7
CDS-3UTR CCA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGTCTACCCGGAGGTCCTaGAGCAGGAGAGGGAACACT +
Preference number: 4 (lower is better)
Translates to: ASLGRLSQARRDPRELRRSTRRS*SRRGNT
Trigger: AGTGTTCCCTCTCCTGCTCCAGGACCTCCGGGTAGA...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATGCCCCCACACTGGGTTCAGGGCTCTCAATGGCTaGTCTGAGAAGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: WGEPRLIEDSSECPHTGFRALNG*SEKPAS
Trigger: ACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCT...GAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCCCACAGGGCTCTCAATGGCTGGTCTGAGAAGCCAGCCAGTGCCAAGAATGGAGGTGGGATGAAATTTTaGCAGGCATCAGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: SHRALNGWSEKPASAKNGGGMKF*QASART
Trigger: TGTCCTGGCTGATGCCTGCCAAAATTTCATCCCACC...TCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGTGGTGTCAAAGGCATTaGAGAGAAAAGTGGCATAGG +
Preference number: 4 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVWCQRH*REKWHR
Trigger: CCTATGCCACTTTTCTCTTCAATGCCTTTGACACCA...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGTGGTGTCAAAGGCATTaGAGAGAAAAGTGGCATAGG +
Preference number: 4 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGWCQRH*REKWHR
Trigger: CCTATGCCACTTTTCTCTTCAATGCCTTTGACACCA...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp ATGGGAAACAAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGACTGGAGGGTGGCCCGTaGGCTGGTCGTAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: MGNKNSSHSPQNRDDKQGLEGGP*AGRRSR
Trigger: ACGGCTCCTACGACCAGCTCACGGGCCACCCTCCAG...TCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTTGTTTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTTCTCAATGGCTGGTCTaGGAAGCCAGCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPSQWLV*EASQCQ
Trigger: TTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGA...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTGCCCACTCTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAACTAGGACCTATCCATTaGCTCAGGCCCAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LPTLWPLQLQRSGLLNPQLGPIH*LRPKIS
Trigger: AGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAG...TTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAGAGTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp TCCACTGTGGGGAGTGATAGGCCCCAAGTTCAGGAAGGTCCCAAGTCTATAGAGAAGCAATGCCAGAGATaGGCCAGATATCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: STVGSDRPQVQEGPKSIEKQCQR*ARYLAP
Trigger: TGGGGCCAGATATCTGGCTCATCTCTGGCATTGCTT...CTCTATAGACTTGGGACCTTCCTGAACTTGGGGCCTATCACTCCCCACAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CTGCCCACTCTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGAAAAGTGGCATAGGTaGTGGAGTCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LPTLWPLQLQRSGLLNPQEKWHR*WSLLEE
Trigger: TTCCTCAAGGAGACTCCAGCACCTATGCCACTTTTC...TTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAGAGTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCGGCCTCCTCCCGGAGTaGAGGGTACGTGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVGLLPE*RVRVLA
Trigger: GGCAAGTACACGTACCCTGCACTCCGGGAGGAGGCC...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTTTCAGATGCTATGCCTaGCTCCCTCCTTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPFRCYA*LPPSLS
Trigger: GGAGAGGGAAGGAGGGAGGCAGGCATAGCATCTGAA...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGTTCAGATGCTATGCCTaGCTCCCTCCTTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ASLGRLSQARRDPRELRRFRCYA*LPPSLS
Trigger: GGAGAGGGAAGGAGGGAGGCAGGCATAGCATCTGAA...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCTGACCGAGCCATCATaGTTGGTGTCAAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPALTEPS*LVSKAL
Trigger: CAATGCCTTTGACACCAACCATGATGGCTCGGTCAG...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCTTTCTGTCCATCTTCTaGAAGAAGCTCTCCACGTGT +
Preference number: 4 (lower is better)
Translates to: APEIWTTESPSSWIPPAPFLSIF*KKLSTC
Trigger: ACACGTGGAGAGCTTCTTCCAGAAGATGGACAGAAA...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGTTTCTGTCCATCTTCTaGAAGAAGCTCTCCACGTGT +
Preference number: 4 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGFLSIF*KKLSTC
Trigger: ACACGTGGAGAGCTTCTTCCAGAAGATGGACAGAAA...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCTCAGCTCCAGAGATCTaGACTACTGAATCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPASAPEI*TTESPS
Trigger: GCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCACAGACCTGTGGAACTTaGAGCTATAACCTGGTATGC +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPQTCGT*SYNLVC
Trigger: GCATACCAGGTTATAGCTCCAAGTTCCACAGGTCTG...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGAGGTGGGATGAAATTTTaGCAGGCATCAGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGGGMKF*QASART
Trigger: TGTCCTGGCTGATGCCTGCCAAAATTTCATCCCACC...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATGGAGGTTATCTGGGGTaGGGTGGGGAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDGGYLG*GGESPG
Trigger: ACCTGGGCTCTCCCCACCCCACCCCAGATAACCTCC...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGACAGATTCTGGCCAACTaGGAGGGTAAGCTAAATGGG +
Preference number: 4 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGQILAN*EGKLNG
Trigger: CCCATTTAGCTTACCCTCCCAGTTGGCCAGAATCTG...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTTCTCCCCTCAGATTCTaGCCAACTGGGAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPSPLRF*PTGRVS
Trigger: GCTTACCCTCCCAGTTGGCCAGAATCTGAGGGGAGA...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGTCTCCCCTCAGATTCTaGCCAACTGGGAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: ASLGRLSQARRDPRELRRSPLRF*PTGRVS
Trigger: GCTTACCCTCCCAGTTGGCCAGAATCTGAGGGGAGA...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGTTTGACAAGACTCAATaGATTCCTCAATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWFDKTQ*IPQWSP
Trigger: TGGTGACCATTGAGGAATTCATTGAGTCTTGTCAAA...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGATGTTCTCATCCTTTTaGCAAGACTCAATGAATTCC +
Preference number: 4 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRMFSSF*QDSMNS
Trigger: GGAATTCATTGAGTCTTGTCAAAAGGATGAGAACAT...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGTTCTCATCCTTTTaGCAAGACTCAATGAATTCC +
Preference number: 4 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRMFSSF*QDSMNS
Trigger: GGAATTCATTGAGTCTTGTCAAAAGGATGAGAACAT...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTCTCCTGGGGGCTAGATaGCATTGTCAAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPLLGAR*HCQRAA
Trigger: TGCAGCTCTTTGACAATGTCATCTAGCCCCCAGGAG...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCAGAGATCTGGACTACTaGATCCCCAAGCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSRDLDY*IPKLLD
Trigger: ATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCT...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCAGAGATCTGGACTACTaGATCCCCAAGCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPARDLDY*IPKLLD
Trigger: ATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCT...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGACTAGGACCTATCCATTaGCTCAGGCCCAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGLGPIH*LRPKIS
Trigger: AGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAG...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGTGGAAACTTATATTTTaGTGGCCTGTGGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVWKLIF*WPVVAD
Trigger: GTCTGCTACCACAGGCCATCAAAATATAAGTTTCCA...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCGGGGAGAGCCCAGGTTaGTTGAAGATTCTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSGESPG*LKILVN
Trigger: ATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCC...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCATCTCTGGGTAGATTaGGTCAAGCAAGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSHLWVD*VKQEET
Trigger: GGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATG...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCGCATGGCTGGGGTGCTaGCAATGGGGTTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVAWLGC*QWGWNL
Trigger: CAGGTTCCAACCCCATTGTCAGCACCCCAGCCATGC...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCGCCGGTGACACACGGTaGACAATTCAAATTCATCGT +
Preference number: 4 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSAGDTR*TIQIHR
Trigger: ACGATGAATTTGAATTGTCCACCGTGTGTCACCGGC...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCCACTGTGGGGAGTGATAGGCCCCAAGTTCAGGAAGGTCCCAAGTCTATAGAGTCAGCTCCAGAGATCTaGACTACTGAATCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: STVGSDRPQVQEGPKSIESAPEI*TTESPS
Trigger: GCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA...CTCTATAGACTTGGGACCTTCCTGAACTTGGGGCCTATCACTCCCCACAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGAGTAGGGGTAGGAGGTaGGGAACCGCTCAATTCCTA +
Preference number: 4 (lower is better)
Translates to: ASLGRLSQARRDPRELRRSRGRR*GTAQFL
Trigger: TAGGAATTGAGCGGTTCCCCACCTCCTACCCCTACT...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGATTCTGGCCAACTaGGAGGGTAAGCTAAATGGG +
Preference number: 4 (lower is better)
Translates to: SRPFYSQPQPPPRTYPLTQILAN*EGKLNG
Trigger: CCCATTTAGCTTACCCTCCCAGTTGGCCAGAATCTG...AGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATAGACCCTCAGGCCGGTaGCACACGGTGGACAATTCA +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDRPSGR*HTVDNS
Trigger: TGAATTGTCCACCGTGTGTCACCGGCCTGAGGGTCT...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCTGGTGTCAAAGGCATTaGAGAGAAAAGTGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SAPEIWTTESPSSWIPPAWCQRH*REKWHR
Trigger: CCTATGCCACTTTTCTCTTCAATGCCTTTGACACCA...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR GCA 90 bp ATGGGAAACAAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGATCCCCTCTTTGGCGCTaGCGGGATTGGCTCCCCCTA +
Preference number: 4 (lower is better)
Translates to: MGNKNSSHSPQNRDDKQGSPLWR*RDWLPL
Trigger: TAGGGGGAGCCAATCCCGGCAGCGCCAAAGAGGGGA...TCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTTGTTTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000358038.7
CDS-3UTR GCA 90 bp TCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTGACTGAAGATTCTAGTGAATaGCCCCACACTGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SRPFYSQPQPPPRTYPLTEDSSE*PHTGFR
Trigger: TCTGAACCCAGTGTGGGGGCATTCACTAGAATCTTC...AGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGCTGACCGAGCCATCATaGTTGGTGTCAAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: ASLGRLSQARRDPRELRRLTEPS*LVSKAL
Trigger: CAATGCCTTTGACACCAACCATGATGGCTCGGTCAG...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp TCCACTGTGGGGAGTGATAGGCCCCAAGTTCAGGAAGGTCCCAAGTCTATAGAGCAGACCTGTGGAACTTaGAGCTATAACCTGGTATGC +
Preference number: 4 (lower is better)
Translates to: STVGSDRPQVQEGPKSIEQTCGT*SYNLVC
Trigger: GCATACCAGGTTATAGCTCCAAGTTCCACAGGTCTG...CTCTATAGACTTGGGACCTTCCTGAACTTGGGGCCTATCACTCCCCACAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp ATGGGAAACAAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGCCCCAGGCTCTCCATaGATACCGAGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MGNKNSSHSPQNRDDKQGAPGSP*IPRRVW
Trigger: CCACACCCTCCTCGGTATCCATGGAGAGCCTGGGGC...TCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTTGTTTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCATTTGACAAGACTCAATaGATTCCTCAATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPFDKTQ*IPQWSP
Trigger: TGGTGACCATTGAGGAATTCATTGAGTCTTGTCAAA...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR TCA 90 bp CCATGGATACCGAGGAGGGTGTGGAAAATTTCTGGGGCATTTCTAAGGAGACAACTCCTGGGGGCTAGATaGCATTGTCAAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PWIPRRVWKISGAFLRRQLLGAR*HCQRAA
Trigger: TGCAGCTCTTTGACAATGTCATCTAGCCCCCAGGAG...TTGTCTCCTTAGAAATGCCCCAGAAATTTTCCACACCCTCCTCGGTATCCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATTCTCAATGGCTGGTCTaGGAAGCCAGCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDSQWLV*EASQCQ
Trigger: TTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGA...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCCAGTCAACAGTCTTCTaGTGGGGAAGGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVQSTVF*WGRGLS
Trigger: AGAGAGCCCCCTTCCCCATCAGAAGACTGTTGACTG...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTGAAAAGTGGCATAGGTaGTGGAGTCTCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPEKWHR*WSLLEE
Trigger: TTCCTCAAGGAGACTCCAGCACCTATGCCACTTTTC...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCTTCAGATGCTATGCCTaGCTCCCTCCTTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVFRCYA*LPPSLS
Trigger: GGAGAGGGAAGGAGGGAGGCAGGCATAGCATCTGAA...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATCACACTGGGTTCAGATaGTATGCCTGCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDHTGFR*YACLPP
Trigger: AGGAGGGAGGCAGGCATAGCATCTGAACCCAGTGTG...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCACTGACCCCCTCTCCTaGGGGCTAGATGACATTGTC +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVTDPLS*GLDDIV
Trigger: GACAATGTCATCTAGCCCCCAGGAGAGGGGGTCAGT...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATAGGGCTCTCAATGGCTaGTCTGAGAAGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDRALNG*SEKPAS
Trigger: ACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCT...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATGATGAGCCAGATATCTaGCCCCAGGCTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDDEPDI*PQALHG
Trigger: TCCATGGAGAGCCTGGGGCCAGATATCTGGCTCATC...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATCTAAGGCATCCACTGTaGGGAGTGATAGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDLRHPL*GVIGPK
Trigger: CTTGGGGCCTATCACTCCCCACAGTGGATGCCTTAG...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp ATGGGAAACAAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAATCGTCCACGCTGTCTaGGGACAGCGACCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: MGNKNSSHSPQNRDDKQGIVHAV*GQRPSH
Trigger: GTGACTGGGTCGCTGTCCCCAGACAGCGTGGACGAT...TCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTTGTTTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348850.9
CDS-3UTR TCA 90 bp CCATGGATACCGAGGAGGGTGTGGAAAATTTCTGGGGCATTTCTAAGGAGACAACAAAGTCCTCAAAACTaGCCGAGCCATCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: PWIPRRVWKISGAFLRRQQSPQN*PSHHGW
Trigger: CCAACCATGATGGCTCGGTCAGTTTTGAGGACTTTG...TTGTCTCCTTAGAAATGCCCCAGAAATTTTCCACACCCTCCTCGGTATCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATATGGAGCATTCTCTCTaGGAGGGGAGTCTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDMEHSL*EGSLRG
Trigger: TCCCCTAAGACTCCCCTCTCAGAGAGAATGCTCCAT...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATGCCCCCACACTGGGTTCTGGAAACTTATATTTTaGTGGCCTGTGGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: WGEPRLIEDSSECPHTGFWKLIF*WPVVAD
Trigger: GTCTGCTACCACAGGCCATCAAAATATAAGTTTCCA...GAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp TCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTGACTTGGAAACTTATATTTTaGTGGCCTGTGGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SRPFYSQPQPPPRTYPLTWKLIF*WPVVAD
Trigger: GTCTGCTACCACAGGCCATCAAAATATAAGTTTCCA...AGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCAAGCAATGCCAGAGATaGGCCAGATATCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVKQCQR*ARYLAP
Trigger: TGGGGCCAGATATCTGGCTCATCTCTGGCATTGCTT...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCGCAAGGAGGGTGGGATaGAATTTTGGCAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVARRVG*NFGRHQ
Trigger: CTGATGCCTGCCAAAATTTCATCCCACCCTCCTTGC...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATGCAAGGAGGGTGGGATaGAATTTTGGCAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDARRVG*NFGRHQ
Trigger: CTGATGCCTGCCAAAATTTCATCCCACCCTCCTTGC...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CCATGGATACCGAGGAGGGTGTGGAAAATTTCTGGGGCATTTCTAAGGAGACAACTGACCGAGCCATCATaGTTGGTGTCAAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: PWIPRRVWKISGAFLRRQLTEPS*LVSKAL
Trigger: CAATGCCTTTGACACCAACCATGATGGCTCGGTCAG...TTGTCTCCTTAGAAATGCCCCAGAAATTTTCCACACCCTCCTCGGTATCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCAGTAGGGGTAGGAGGTaGGGAACCGCTCAATTCCTA +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVSRGRR*GTAQFL
Trigger: TAGGAATTGAGCGGTTCCCCACCTCCTACCCCTACT...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCTCAGCTCCAGAGATCTaGACTACTGAATCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVSAPEI*TTESPS
Trigger: GCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTTTTGACAAGACTCAATaGATTCCTCAATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPFDKTQ*IPQWSP
Trigger: TGGTGACCATTGAGGAATTCATTGAGTCTTGTCAAA...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp TCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTAGGACCTATCCATTGACTATGTTCTCATCCTTTTaGCAAGACTCAATGAATTCC +
Preference number: 4 (lower is better)
Translates to: SRPFYSQPQPPPRTYPLTMFSSF*QDSMNS
Trigger: GGAATTCATTGAGTCTTGTCAAAAGGATGAGAACAT...AGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR GCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATGAAGATTCTAGTGAATaGCCCCACACTGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDEDSSE*PHTGFR
Trigger: TCTGAACCCAGTGTGGGGGCATTCACTAGAATCTTC...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CCA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCCAGACCTGTGGAACTTaGAGCTATAACCTGGTATGC +
Preference number: 4 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVQTCGT*SYNLVC
Trigger: GCATACCAGGTTATAGCTCCAAGTTCCACAGGTCTG...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATTGGTGTCAAAGGCATTaGAGAGAAAAGTGGCATAGG +
Preference number: 4 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDWCQRH*REKWHR
Trigger: CCTATGCCACTTTTCTCTTCAATGCCTTTGACACCA...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGATGTTCTCATCCTTTTaGCAAGACTCAATGAATTCC +
Preference number: 4 (lower is better)
Translates to: ASLGRLSQARRDPRELRRMFSSF*QDSMNS
Trigger: GGAATTCATTGAGTCTTGTCAAAAGGATGAGAACAT...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR TCA 90 bp CCATGGATACCGAGGAGGGTGTGGAAAATTTCTGGGGCATTTCTAAGGAGACAATTTGACAAGACTCAATaGATTCCTCAATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: PWIPRRVWKISGAFLRRQFDKTQ*IPQWSP
Trigger: TGGTGACCATTGAGGAATTCATTGAGTCTTGTCAAA...TTGTCTCCTTAGAAATGCCCCAGAAATTTTCCACACCCTCCTCGGTATCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS TCA 90 bp AACACTAGGCAGCAGGTGAGCGCAGAGCCGGAGGCAGAGCGGAGCTaGGCGCGGAGCCGAGCCGAGCTGCCTCTCTCCTCCCGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: NTRQQVSAEPEAERS*ARSRAELPLSSRPL
Trigger: GAGGGGGCGGGAGGAGAGAGGCAGCTCGGCTCGGCTCCGCGCTCAGCTCCGCTCTGCCTCCGGCTCTGCGCTCACCTGCTGCCTAGTGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355657.6
ENST00000358038.7
CDS CCA 90 bp GATGATGGCCATCTTCGAGGTCTATCAGCGGGCCAAGGCCTGGCCTaGCCCCAGAGCCAGGGATCCGACTCAGTGCTCGCCCCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: DDGHLRGLSAGQGLA*PQSQGSDSVLAPRP
Trigger: GGGCCGCGGGGCGAGCACTGAGTCGGATCCCTGGCTCTGGGGCCAGGCCAGGCCTTGGCCCGCTGATAGACCTCGAAGATGGCCATCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483385.1
CDS TCA 90 bp GGGGAAGTCCGGGCTGAGGCTGAGTCTGGGAATGGGCCCGGGGTCTaGGGTCTACCCGGAGGTCCTGGAGCAGGAGAGGGAACACTAGGC +
Preference number: 5 (lower is better)
Translates to: GEVRAEAESGNGPGV*GLPGGPGAGEGTLG
Trigger: GCCTAGTGTTCCCTCTCCTGCTCCAGGACCTCCGGGTAGACCTCAGACCCCGGGCCCATTCCCAGACTCAGCCTCAGCCCGGACTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355657.6
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGCGCCTCCTCCCCTCTTaGGCGCTGCCGGGATTGGCT +
Preference number: 5 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRRLLPS*ALPGLA
Trigger: AGCCAATCCCGGCAGCGCCAAAGAGGGGAGGAGGCG...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358038.7
CDS CCA 90 bp AGGGAGGCTGGGGCGGCTAATGTTTCACTGACTGAGGGCAGGGCTTaGGGCCCGCAGCACGGCAGCAGCTTGAGGAATCGCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: REAGAANVSLTEGRA*GPQHGSSLRNRCFS
Trigger: GCTGAAGCAGCGATTCCTCAAGCTGCTGCCGTGCTGCGGGCCCCAAGCCCTGCCCTCAGTCAGTGAAACATTAGCCGCCCCAGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356640.7
CDS-3UTR CAA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGTCTCCACGTGTTCCCTaGGGGCCTCCTCCCGGAGTG +
Preference number: 5 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGSPRVP*GPPPGV
Trigger: CACTCCGGGAGGAGGCCCCAAGGGAACACGTGGAGA...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGTCGGACAAACTCTCCTaGCGGCCCTGGCCCCGCATG +
Preference number: 5 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGSDKLS*RPWPRM
Trigger: CATGCGGGGCCAGGGCCGCAAGGAGAGTTTGTCCGA...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp TCCCACAGGGCTCTCAATGGCTGGTCTGAGAAGCCAGCCAGTGCCAAGAATGGATCTCCACGTGTTCCCTaGGGGCCTCCTCCCGGAGTG +
Preference number: 5 (lower is better)
Translates to: SHRALNGWSEKPASAKNGSPRVP*GPPPGV
Trigger: CACTCCGGGAGGAGGCCCCAAGGGAACACGTGGAGA...TCCATTCTTGGCACTGGCTGGCTTCTCAGACCAGCCATTGAGAGCCCTGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGTCCTTGCGCGTGAATTaGGTTTGCTCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRSLRVN*VCSCSC
Trigger: GCAGCTGCAGGAGCAAACCAAATTCACGCGCAAGGA...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGTCTCCCTATACATTCTaGTCCCCCTCCCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRSPYTF*SPSHRA
Trigger: AGCCCTGTGGGAGGGGGACAAGAATGTATAGGGAGA...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS GCA 90 bp TGGAAGGAGAGGGCACCAGGGTTCTTGAAGCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAATTTGGTTTGCTCCTGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: WKERAPGFLKPRYRT*NSLRVNLVCSCSCS
Trigger: GGAGCAGCTGCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACCCTGGTGCCCTCTCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353068.7
CDS CCA 90 bp TCAAATTCATCGTCCACGCTGTTTTCACTGACTGAGGGCAGGGCTTaGGGCCCGCAGCACGGCAGCAGCTTGAGGAATCGCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SNSSSTLFSLTEGRA*GPQHGSSLRNRCFS
Trigger: GCTGAAGCAGCGATTCCTCAAGCTGCTGCCGTGCTGCGGGCCCCAAGCCCTGCCCTCAGTCAGTGAAAACAGCGTGGACGATGAATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358038.7
ENST00000472764.5
CDS CCA 90 bp AGGAGGGAGCTGTGTCCTCGGGTACTCTTCACCCAACTCCTTCTCTaGGTTTGGCCTGGAGATCCTGGCCCTGAACTCCAGGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: RRELCPRVLFTQLLL*VWPGDPGPELQETG
Trigger: GCCTGTTTCCTGGAGTTCAGGGCCAGGATCTCCAGGCCAAACCCAGAGAAGGAGTTGGGTGAAGAGTACCCGAGGACACAGCTCCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483385.1
CDS-3UTR CAA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCGCGCGTGAATTTGGTTaGCTCCTGCAGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: APEIWTTESPSSWIPPAPAREFG*LLQLLQ
Trigger: CTGGAGCAGCTGCAGGAGCAAACCAAATTCACGCGC...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGAGGACCTGCAACTCCTaGCGCGTGAATTTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRRTCNS*RVNLVC
Trigger: GCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCT...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGCTGGGACATTCGTTCTaGAAGCCCCGGTACAGGACC +
Preference number: 5 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVLGHSF*KPRYRT
Trigger: GGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCAG...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGCTGGGACATTCGTTCTaGAAGCCCCGGTACAGGACC +
Preference number: 5 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGLGHSF*KPRYRT
Trigger: GGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCAG...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCCTGGGACATTCGTTCTaGAAGCCCCGGTACAGGACC +
Preference number: 5 (lower is better)
Translates to: APEIWTTESPSSWIPPAPLGHSF*KPRYRT
Trigger: GGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCAG...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp CTGCCCACTCTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAACAGCACGGCAGCAGCTaGAGGAATCGCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LPTLWPLQLQRSGLLNPQQHGSS*RNRCFS
Trigger: GCTGAAGCAGCGATTCCTCAAGCTGCTGCCGTGCTG...TTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAGAGTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGTCTCCCTATACATTCTaGTCCCCCTCCCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMSPYTF*SPSHRA
Trigger: AGCCCTGTGGGAGGGGGACAAGAATGTATAGGGAGA...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGCGCGTGAATTTGGTTaGCTCCTGCAGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPAREFG*LLQLLQ
Trigger: CTGGAGCAGCTGCAGGAGCAAACCAAATTCACGCGC...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGAGGACCTGCAACTCCTaGCGCGTGAATTTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWRTCNS*RVNLVC
Trigger: GCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCT...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGGGTGCTGGAGTCTCCTaGAGGAAAGAACTGGGAGTA +
Preference number: 5 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMGAGVS*RKELGV
Trigger: TACTCCCAGTTCTTTCCTCAAGGAGACTCCAGCACC...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTTCTCCACGTGTTCCCTaGGGGCCTCCTCCCGGAGTG +
Preference number: 5 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPSPRVP*GPPPGV
Trigger: CACTCCGGGAGGAGGCCCCAAGGGAACACGTGGAGA...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CACTCTCAACACTGGGTGTCAGGCAGGAAGGGGGTGAGAGCTGGTGGGAGTTGGTCAAGCATTTCCTCCTaGGTGATGCAGCCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HSQHWVSGRKGVRAGGSWSSISS*VMQPSL
Trigger: CAAGGACGGCTGCATCACCAAGGAGGAAATGCTTGA...CCAACTCCCACCAGCTCTCACCCCCTTCCTGCCTGACACCCAGTGTTGAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGCCTAGGACCTATCCATaGACTCAGGCCCAAGATTTC +
Preference number: 5 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRPRTYP*TQAQDF
Trigger: GAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS GCA 90 bp TCGTCCACGCTGTCTTCCAAGGAGACAGGCTCAAAGAGGCCAAACTaGTCCAGGACCTTGACAAACAGAGCGAGGACCACGAGCACAGCA +
Preference number: 5 (lower is better)
Translates to: SSTLSSKETGSKRPN*SRTLTNRARTTSTA
Trigger: TGCTGTGCTCGTGGTCCTCGCTCTGTTTGTCAAGGTCCTGGAGCAGTTTGGCCTCTTTGAGCCTGTCTCCTTGGAAGACAGCGTGGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642874.1
CDS-3UTR CAA 90 bp CTGCCCACTCTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAATCCTTGCGCGTGAATTaGGTTTGCTCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LPTLWPLQLQRSGLLNPQSLRVN*VCSCSC
Trigger: GCAGCTGCAGGAGCAAACCAAATTCACGCGCAAGGA...TTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAGAGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGACTGGGACATTCGTTCTaGAAGCCCCGGTACAGGACC +
Preference number: 5 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGLGHSF*KPRYRT
Trigger: GGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCAG...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGACCGAGCCATCATGGTaGGTGTCAAAGGCATTGAAG +
Preference number: 5 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMTEPSW*VSKALK
Trigger: CTTCAATGCCTTTGACACCAACCATGATGGCTCGGT...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGGTCACCACACCATCCTaGTTTCTGTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMVTTPS*FLSIFW
Trigger: CCAGAAGATGGACAGAAACAAGGATGGTGTGGTGAC...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATGCCCCCACACTGGGTTCCAGCACGGCAGCAGCTaGAGGAATCGCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: WGEPRLIEDSSECPHTGFQHGSS*RNRCFS
Trigger: GCTGAAGCAGCGATTCCTCAAGCTGCTGCCGTGCTG...GAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGCCTAGGACCTATCCATaGACTCAGGCCCAAGATTTC +
Preference number: 5 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWPRTYP*TQAQDF
Trigger: GAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGGCATCTCTGGGTAGATaGAGTCAAGCAAGAAGAGAC +
Preference number: 5 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRASLGR*SQARRD
Trigger: GTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTGCCCACTCTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGTGCTGACAATGGGGTaGGAACCTGGGTCCTATGGT +
Preference number: 5 (lower is better)
Translates to: LPTLWPLQLQRSGLLNPQVLTMG*EPGSYG
Trigger: ACCATAGGACCCAGGTTCCAACCCCATTGTCAGCAC...TTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAGAGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGGCATCGGTTCATGGTTaGGCGGCGAGCTCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: ASLGRLSQARRDPRELRRASVHG*AASSAS
Trigger: AGACGCCGAGCTCGCCGCCAAACCATGAACCGATGC...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348850.9
CDS GCA 90 bp ACAATTCCGCTGGGACATTCGTTCTTGAAGCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAATTTGGTTTGCTCCTGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TIPLGHSFLKPRYRT*NSLRVNLVCSCSCS
Trigger: GGAGCAGCTGCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCAGCGGAATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000239117.3
ENST00000343195.8
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
ENST00000434163.5
ENST00000461105.5
ENST00000483385.1
ENST00000642874.1
CDS GCA 90 bp TGTGATGGGAGGGAAGACTTGTTCTTGAAGCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAATTTGGTTTGCTCCTGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CDGREDLFLKPRYRT*NSLRVNLVCSCSCS
Trigger: GGAGCAGCTGCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACAAGTCTTCCCTCCCATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472764.5
CDS-3UTR CAA 90 bp CTGCCCACTCTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAAGGACCTGCAACTCCTaGCGCGTGAATTTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: LPTLWPLQLQRSGLLNPQRTCNS*RVNLVC
Trigger: GCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCT...TTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAGAGTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGTTGAAGTTCTCCTCATaGACAATTCCGCTGGGACAT +
Preference number: 5 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRLKFSS*TIPLGH
Trigger: ATGTCCCAGCGGAATTGTCAATGAGGAGAACTTCAA...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp GCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCACCGAGCCATCATGGTaGGTGTCAAAGGCATTGAAG +
Preference number: 5 (lower is better)
Translates to: APEIWTTESPSSWIPPAPTEPSW*VSKALK
Trigger: CTTCAATGCCTTTGACACCAACCATGATGGCTCGGT...GGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp GGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGTTAAGGTCATACAGGTaGAAGGCCCAATTAAGCCTG +
Preference number: 5 (lower is better)
Translates to: GLLNPQALGSLQPPGRRRLRSYR*KAQLSL
Trigger: CAGGCTTAATTGGGCCTTCAACCTGTATGACCTTAA...CCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGGTGATGCAGCCGTCCTaGTTAAGGTCATACAGGTTG +
Preference number: 5 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGVMQPS*LRSYRL
Trigger: CAACCTGTATGACCTTAACAAGGACGGCTGCATCAC...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGGTGATGCAGCCGTCCTaGTTAAGGTCATACAGGTTG +
Preference number: 5 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVVMQPS*LRSYRL
Trigger: CAACCTGTATGACCTTAACAAGGACGGCTGCATCAC...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CCATGGATACCGAGGAGGGTGTGGAAAATTTCTGGGGCATTTCTAAGGAGACAATCGGACAAACTCTCCTaGCGGCCCTGGCCCCGCATG +
Preference number: 5 (lower is better)
Translates to: PWIPRRVWKISGAFLRRQSDKLS*RPWPRM
Trigger: CATGCGGGGCCAGGGCCGCAAGGAGAGTTTGTCCGA...TTGTCTCCTTAGAAATGCCCCAGAAATTTTCCACACCCTCCTCGGTATCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCTCTCCCTATACATTCTaGTCCCCCTCCCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSSPYTF*SPSHRA
Trigger: AGCCCTGTGGGAGGGGGACAAGAATGTATAGGGAGA...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGAGGGTGGGATGAAATTTaGGCAGGCATCAGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGGWDEI*AGISQD
Trigger: GTCCTGGCTGATGCCTGCCAAAATTTCATCCCACCC...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GAGGGTAAGCTAAATGGGACGAGCAGGTGTGCTAAGGGGTGGCCGCATGGCTGGTGGGGAGAGCCCAGGTaGATTGAAGATTCTAGTGAA +
Preference number: 5 (lower is better)
Translates to: EGKLNGTSRCAKGWPHGWWGEPR*IEDSSE
Trigger: TTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA...CCAGCCATGCGGCCACCCCTTAGCACACCTGCTCGTCCCATTTAGCTTACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGTGGGGAGAGCCCAGGTaGATTGAAGATTCTAGTGAA +
Preference number: 5 (lower is better)
Translates to: LLNPQALGSLQPPGRRRMWGEPR*IEDSSE
Trigger: TTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA...CATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGGCGCGTGAATTTGGTTaGCTCCTGCAGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: ASLGRLSQARRDPRELRRAREFG*LLQLLQ
Trigger: CTGGAGCAGCTGCAGGAGCAAACCAAATTCACGCGC...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCTCGGACAAACTCTCCTaGCGGCCCTGGCCCCGCATG +
Preference number: 5 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVSDKLS*RPWPRM
Trigger: CATGCGGGGCCAGGGCCGCAAGGAGAGTTTGTCCGA...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp TGGGGAGAGCCCAGGTTGATTGAAGATTCTAGTGAATGCCCCCACACTGGGTTCGGGTGGGATGAAATTTaGGCAGGCATCAGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: WGEPRLIEDSSECPHTGFGWDEI*AGISQD
Trigger: GTCCTGGCTGATGCCTGCCAAAATTTCATCCCACCC...GAACCCAGTGTGGGGGCATTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGGCATCTCTGGGTAGATaGAGTCAAGCAAGAAGAGAC +
Preference number: 5 (lower is better)
Translates to: QRSGLLNPQALGSLQPPGASLGR*SQARRD
Trigger: GTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC...CCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGTTGAAGTTCTCCTCATaGACAATTCCGCTGGGACAT +
Preference number: 5 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVLKFSS*TIPLGH
Trigger: ATGTCCCAGCGGAATTGTCAATGAGGAGAACTTCAA...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGAACCGAGCCATCATGGTaGGTGTCAAAGGCATTGAAG +
Preference number: 5 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGTEPSW*VSKALK
Trigger: CTTCAATGCCTTTGACACCAACCATGATGGCTCGGT...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp TCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCGTCACCACACCATCCTaGTTTCTGTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SAPEIWTTESPSSWIPPAVTTPS*FLSIFW
Trigger: CCAGAAGATGGACAGAAACAAGGATGGTGTGGTGAC...GGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCGTGATGCAGCCGTCCTaGTTAAGGTCATACAGGTTG +
Preference number: 5 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSVMQPS*LRSYRL
Trigger: CAACCTGTATGACCTTAACAAGGACGGCTGCATCAC...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGGTGCTGACAATGGGGTaGGAACCTGGGTCCTATGGT +
Preference number: 5 (lower is better)
Translates to: ASLGRLSQARRDPRELRRVLTMG*EPGSYG
Trigger: ACCATAGGACCCAGGTTCCAACCCCATTGTCAGCAC...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGAGGACCTGCAACTCCTaGCGCGTGAATTTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: ASLGRLSQARRDPRELRRRTCNS*RVNLVC
Trigger: GCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCT...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCATTGAAGTTCTCCTCATaGACAATTCCGCTGGGACAT +
Preference number: 5 (lower is better)
Translates to: LQRSGLLNPQALGSLQPPLKFSS*TIPLGH
Trigger: ATGTCCCAGCGGAATTGTCAATGAGGAGAACTTCAA...TGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTGGTGCTGGAGTCTCCTaGAGGAAAGAACTGGGAGTA +
Preference number: 5 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPGAGVS*RKELGV
Trigger: TACTCCCAGTTCTTTCCTCAAGGAGACTCCAGCACC...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp ATGGGAAACAAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGATCTCCACGTGTTCCCTaGGGGCCTCCTCCCGGAGTG +
Preference number: 5 (lower is better)
Translates to: MGNKNSSHSPQNRDDKQGSPRVP*GPPPGV
Trigger: CACTCCGGGAGGAGGCCCCAAGGGAACACGTGGAGA...TCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTTGTTTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTTCAAGCATTTCCTCCTaGGTGATGCAGCCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPSSISS*VMQPSL
Trigger: CAAGGACGGCTGCATCACCAAGGAGGAAATGCTTGA...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTGAATCCCCAAGCTCTTGGATCCCTCCAGCCCCCAGGGAGGCGTAGGATGAGGGATGTTCTCATCCTTTaGACAAGACTCAATGAATTC +
Preference number: 5 (lower is better)
Translates to: LNPQALGSLQPPGRRRMRDVLIL*TRLNEF
Trigger: GAATTCATTGAGTCTTGTCAAAAGGATGAGAACATC...CCTCATCCTACGCCTCCCTGGGGGCTGGAGGGATCCAAGAGCTTGGGGATTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS-3UTR CAA 90 bp AGGAGGTGGGGAACCGCTCAATTCCTACAGGAGGGGCACTCTCAACACTGGGTGCTGGAAACTTATATTTaGATGGCCTGTGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: RRWGTAQFLQEGHSQHWVLETYI*MACGSR
Trigger: TCTGCTACCACAGGCCATCAAAATATAAGTTTCCAG...CACCCAGTGTTGAGAGTGCCCCTCCTGTAGGAATTGAGCGGTTCCCCACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CAACCCCAGCCACCTCCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCTGGGGAGAGCCCAGGTaGATTGAAGATTCTAGTGAA +
Preference number: 5 (lower is better)
Translates to: QPQPPPRTYPLTQAQDFSWGEPR*IEDSSE
Trigger: TTCACTAGAATCTTCAATCAACCTGGGCTCTCCCCA...GGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGGAGGTGGCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTACCGAGCCATCATGGTaGGTGTCAAAGGCATTGAAG +
Preference number: 5 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPTEPSW*VSKALK
Trigger: CTTCAATGCCTTTGACACCAACCATGATGGCTCGGT...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGCCTAGGACCTATCCATaGACTCAGGCCCAAGATTTC +
Preference number: 5 (lower is better)
Translates to: ASLGRLSQARRDPRELRRPRTYP*TQAQDF
Trigger: GAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CCATGGATACCGAGGAGGGTGTGGAAAATTTCTGGGGCATTTCTAAGGAGACAAGGTGCTGGAGTCTCCTaGAGGAAAGAACTGGGAGTA +
Preference number: 5 (lower is better)
Translates to: PWIPRRVWKISGAFLRRQGAGVS*RKELGV
Trigger: TACTCCCAGTTCTTTCCTCAAGGAGACTCCAGCACC...TTGTCTCCTTAGAAATGCCCCAGAAATTTTCCACACCCTCCTCGGTATCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTCTGGCCCCTTCAGCTCCAGAGATCTGGACTACTGAATCCCCAAGCTCTTGGACTGGAAACTTATATTTaGATGGCCTGTGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: LWPLQLQRSGLLNPQALGLETYI*MACGSR
Trigger: TCTGCTACCACAGGCCATCAAAATATAAGTTTCCAG...TCCAAGAGCTTGGGGATTCAGTAGTCCAGATCTCTGGAGCTGAAGGGGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATGGTGCTGGAGTCTCCTaGAGGAAAGAACTGGGAGTA +
Preference number: 5 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDGAGVS*RKELGV
Trigger: TACTCCCAGTTCTTTCCTCAAGGAGACTCCAGCACC...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CCATGGATACCGAGGAGGGTGTGGAAAATTTCTGGGGCATTTCTAAGGAGACAAGTCACCACACCATCCTaGTTTCTGTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PWIPRRVWKISGAFLRRQVTTPS*FLSIFW
Trigger: CCAGAAGATGGACAGAAACAAGGATGGTGTGGTGAC...TTGTCTCCTTAGAAATGCCCCAGAAATTTTCCACACCCTCCTCGGTATCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGTTAAGGTCATACAGGTaGAAGGCCCAATTAAGCCTG +
Preference number: 5 (lower is better)
Translates to: ASLGRLSQARRDPRELRRLRSYR*KAQLSL
Trigger: CAGGCTTAATTGGGCCTTCAACCTGTATGACCTTAA...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATTCAAGCATTTCCTCCTaGGTGATGCAGCCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDSSISS*VMQPSL
Trigger: CAAGGACGGCTGCATCACCAAGGAGGAAATGCTTGA...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CTGAGCAATCATAATCTGTCCAGGCCCTTCTATTCTCAACCCCAGCCACCTCCTCTGGAAACTTATATTTaGATGGCCTGTGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: LSNHNLSRPFYSQPQPPPLETYI*MACGSR
Trigger: TCTGCTACCACAGGCCATCAAAATATAAGTTTCCAG...AGGAGGTGGCTGGGGTTGAGAATAGAAGGGCCTGGACAGATTATGATTGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CCATGGATACCGAGGAGGGTGTGGAAAATTTCTGGGGCATTTCTAAGGAGACAAGCATCTCTGGGTAGATaGAGTCAAGCAAGAAGAGAC +
Preference number: 5 (lower is better)
Translates to: PWIPRRVWKISGAFLRRQASLGR*SQARRD
Trigger: GTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC...TTGTCTCCTTAGAAATGCCCCAGAAATTTTCCACACCCTCCTCGGTATCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp ATGGGAAACAAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGTGCTGACAATGGGGTaGGAACCTGGGTCCTATGGT +
Preference number: 5 (lower is better)
Translates to: MGNKNSSHSPQNRDDKQGVLTMG*EPGSYG
Trigger: ACCATAGGACCCAGGTTCCAACCCCATTGTCAGCAC...TCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTTGTTTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp AAAAACTCAAGTCATAGCCCTCAAAACAGGGACGATAAGCAAGGAGGGTGGGATTTGAAGTTCTCCTCATaGACAATTCCGCTGGGACAT +
Preference number: 5 (lower is better)
Translates to: KNSSHSPQNRDDKQGGWDLKFSS*TIPLGH
Trigger: ATGTCCCAGCGGAATTGTCAATGAGGAGAACTTCAA...ATCCCACCCTCCTTGCTTATCGTCCCTGTTTTGAGGGCTATGACTTGAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp GCATCTCTGGGTAGATTGAGTCAAGCAAGAAGAGACCCTAGGGAACTGAGGAGGGATGTTCTCATCCTTTaGACAAGACTCAATGAATTC +
Preference number: 5 (lower is better)
Translates to: ASLGRLSQARRDPRELRRDVLIL*TRLNEF
Trigger: GAATTCATTGAGTCTTGTCAAAAGGATGAGAACATC...CCTCCTCAGTTCCCTAGGGTCTCTTCTTGCTTGACTCAATCTACCCAGAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS-3UTR CAA 90 bp CCTAGGACCTATCCATTGACTCAGGCCCAAGATTTCTCCCTATACATTCTTGTCGATGTTCTCATCCTTTaGACAAGACTCAATGAATTC +
Preference number: 5 (lower is better)
Translates to: PRTYPLTQAQDFSLYILVDVLIL*TRLNEF
Trigger: GAATTCATTGAGTCTTGTCAAAAGGATGAGAACATC...GACAAGAATGTATAGGGAGAAATCTTGGGCCTGAGTCAATGGATAGGTCCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
CDS GCA 72 bp CAGCGACCCAGTCACCAGCTGGTAGAGGGATCGCGCTaGCTGCCCCAGCGGGCTCCGGCACCTGCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: QRPSHQLVEGSR*LPQRAPAPAGA
Trigger: TGCCCCCGCAGGTGCCGGAGCCCGCTGGGGCAGGCAGCGCGATCCCTCTACCAGCTGGTGACTGGGTCGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348850.9
CDS TCA 72 bp CAGCAGGTGAGCGCAGAGCCGGAGGCAGAGCGGAGCTaGGCGCGGAGCCGAGCCGAGCTGCCTCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: QQVSAEPEAERS*ARSRAELPLSS
Trigger: GGAGGAGAGAGGCAGCTCGGCTCGGCTCCGCGCTCAGCTCCGCTCTGCCTCCGGCTCTGCGCTCACCTGCTG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355657.6
ENST00000358038.7
CDS TCA 72 bp CGGGCTGAGGCTGAGTCTGGGAATGGGCCCGGGGTCTaGGGTCTACCCGGAGGTCCTGGAGCAGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: RAEAESGNGPGV*GLPGGPGAGEG
Trigger: TCCCTCTCCTGCTCCAGGACCTCCGGGTAGACCTCAGACCCCGGGCCCATTCCCAGACTCAGCCTCAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355657.6
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
CDS CCA 72 bp CATCTTCGAGGTCTATCAGCGGGCCAAGGCCTGGCCTaGCCCCAGAGCCAGGGATCCGACTCAGTGCTCGCC +
Preference number: 6 (lower is better)
Translates to: HLRGLSAGQGLA*PQSQGSDSVLA
Trigger: GGCGAGCACTGAGTCGGATCCCTGGCTCTGGGGCCAGGCCAGGCCTTGGCCCGCTGATAGACCTCGAAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483385.1
CDS CCA 72 bp GGGGCGGCTAATGTTTCACTGACTGAGGGCAGGGCTTaGGGCCCGCAGCACGGCAGCAGCTTGAGGAATCGC +
Preference number: 6 (lower is better)
Translates to: GAANVSLTEGRA*GPQHGSSLRNR
Trigger: GCGATTCCTCAAGCTGCTGCCGTGCTGCGGGCCCCAAGCCCTGCCCTCAGTCAGTGAAACATTAGCCGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356640.7
CDS CCA 72 bp TCGTCCACGCTGTTTTCACTGACTGAGGGCAGGGCTTaGGGCCCGCAGCACGGCAGCAGCTTGAGGAATCGC +
Preference number: 6 (lower is better)
Translates to: SSTLFSLTEGRA*GPQHGSSLRNR
Trigger: GCGATTCCTCAAGCTGCTGCCGTGCTGCGGGCCCCAAGCCCTGCCCTCAGTCAGTGAAAACAGCGTGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358038.7
ENST00000472764.5
CDS GCA 72 bp AGGGCACCAGGGTTCTTGAAGCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAATTTGGTTTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RAPGFLKPRYRT*NSLRVNLVCSC
Trigger: GCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACCCTGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353068.7
CDS CCA 72 bp CTGTGTCCTCGGGTACTCTTCACCCAACTCCTTCTCTaGGTTTGGCCTGGAGATCCTGGCCCTGAACTCCAG +
Preference number: 6 (lower is better)
Translates to: LCPRVLFTQLLL*VWPGDPGPELQ
Trigger: CTGGAGTTCAGGGCCAGGATCTCCAGGCCAAACCCAGAGAAGGAGTTGGGTGAAGAGTACCCGAGGACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483385.1
CDS CAA 72 bp GGGTTCTTGAAGCCCCGGTACAGGACCTGCAACTCCTaGCGCGTGAATTTGGTTTGCTCCTGCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GFLKPRYRTCNS*RVNLVCSCSCS
Trigger: GGAGCAGCTGCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353068.7
CDS GCA 72 bp GGGAGGGAAGAGTTCTTGAAGCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAATTTGGTTTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GREEFLKPRYRT*NSLRVNLVCSC
Trigger: GCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACTCTTCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355657.6
CDS CCA 72 bp CCTCGGGTACTCTTCACCCAACTCCTTCTCTGGGTTTaGCCTGGAGATCCTGGCCCTGAACTCCAGGAAACA +
Preference number: 6 (lower is better)
Translates to: PRVLFTQLLLWV*PGDPGPELQET
Trigger: TGTTTCCTGGAGTTCAGGGCCAGGATCTCCAGGCCAAACCCAGAGAAGGAGTTGGGTGAAGAGTACCCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483385.1
CDS CAA 72 bp TCGTTCTTGAAGCCCCGGTACAGGACCTGCAACTCCTaGCGCGTGAATTTGGTTTGCTCCTGCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SFLKPRYRTCNS*RVNLVCSCSCS
Trigger: GGAGCAGCTGCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000239117.3
ENST00000343195.8
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
ENST00000434163.5
ENST00000461105.5
ENST00000483385.1
ENST00000642874.1
CDS CAA 72 bp GAGTTCTTGAAGCCCCGGTACAGGACCTGCAACTCCTaGCGCGTGAATTTGGTTTGCTCCTGCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: EFLKPRYRTCNS*RVNLVCSCSCS
Trigger: GGAGCAGCTGCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355657.6
CDS CAA 72 bp GAGACAGGCTCAAAGAGGCCAAACTGCTCCAGGACCTaGACAAACAGAGCGAGGACCACGAGCACAGCAACC +
Preference number: 6 (lower is better)
Translates to: ETGSKRPNCSRT*TNRARTTSTAT
Trigger: GGTTGCTGTGCTCGTGGTCCTCGCTCTGTTTGTCAAGGTCCTGGAGCAGTTTGGCCTCTTTGAGCCTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642874.1
CDS CAA 90 bp TCTTCCAAGGAGACAGGCTCAAAGAGGCCAAACTGCTCCAGGACCTaGACAAACAGAGCGAGGACCACGAGCACAGCAACCATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSKETGSKRPNCSRT*TNRARTTSTATISS
Trigger: GCTGGAGATGGTTGCTGTGCTCGTGGTCCTCGCTCTGTTTGTCAAGGTCCTGGAGCAGTTTGGCCTCTTTGAGCCTGTCTCCTTGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642874.1
CDS GCA 72 bp CTGGGACATTCGTTCTTGAAGCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAATTTGGTTTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LGHSFLKPRYRT*NSLRVNLVCSC
Trigger: GCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACGAATGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000239117.3
ENST00000343195.8
ENST00000348850.9
ENST00000356640.7
ENST00000358038.7
ENST00000370046.5
ENST00000434163.5
ENST00000461105.5
ENST00000483385.1
ENST00000642874.1
CDS CCA 72 bp AAGTTCTCCTCATTGACAATTCCGCTGGGACATTCCTaGAAGGAGAGGGCACCAGGGTTCTTGAAGCCCCGG +
Preference number: 6 (lower is better)
Translates to: KFSSLTIPLGHS*KERAPGFLKPR
Trigger: CCGGGGCTTCAAGAACCCTGGTGCCCTCTCCTTCCAGGAATGTCCCAGCGGAATTGTCAATGAGGAGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353068.7
CDS CCA 72 bp GCAGCTGCTCCAGACCCTCAGGCCGGTGACACACGGTaGACAATTCAAATTCATCGTCCACGCTGTTTTCAC +
Preference number: 6 (lower is better)
Translates to: AAAPDPQAGDTR*TIQIHRPRCFH
Trigger: GTGAAAACAGCGTGGACGATGAATTTGAATTGTCCACCGTGTGTCACCGGCCTGAGGGTCTGGAGCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358038.7
ENST00000472764.5
CDS CAA 72 bp TTGTTCTTGAAGCCCCGGTACAGGACCTGCAACTCCTaGCGCGTGAATTTGGTTTGCTCCTGCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LFLKPRYRTCNS*RVNLVCSCSCS
Trigger: GGAGCAGCTGCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472764.5
CDS TCA 72 bp TTGACAATTCCGCTGGGACATTCCACGTGGCTCATGTaGTGGGAGGGAAGAGTTCTTGAAGCCCCGGTACAG +
Preference number: 6 (lower is better)
Translates to: LTIPLGHSTWLM*WEGRVLEAPVQ
Trigger: CTGTACCGGGGCTTCAAGAACTCTTCCCTCCCATCACATGAGCCACGTGGAATGTCCCAGCGGAATTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355657.6
CDS GCA 72 bp AGGGAAGACTTGTTCTTGAAGCCCCGGTACAGGACCTaGAACTCCTTGCGCGTGAATTTGGTTTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: REDLFLKPRYRT*NSLRVNLVCSC
Trigger: GCAGGAGCAAACCAAATTCACGCGCAAGGAGTTGCAGGTCCTGTACCGGGGCTTCAAGAACAAGTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472764.5