RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000182132

Ensembl transcript IDs: ENST00000328939.9, ENST00000377360.8, ENST00000390656.8, ENST00000411494.5, ENST00000434108.5, ENST00000517344.1, ENST00000518527.1, ENST00000520740.5, ENST00000616807.1, ENST00000636734.1

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGCAACTTGGATGTGCCAGTCTTCTATCCTGTGGGGGTCGGGCTaGTGCAGATGGCCAGCGGGATGCTCTATGATTTTCAGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: GATWMCQSSILWGSG*CRWPAGCSMIFRPG
Trigger: TCCAGGCCTGAAAATCATAGAGCATCCCGCTGGCCATCTGCATCAGCCCGACCCCCACAGGATAGAAGACTGGCACATCCAAGTTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR CCA 90 bp TTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTaGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACATATT +
Preference number: 1 (lower is better)
Translates to: FLGGTCSAGLKQGMW*RYGPLGNGSLPGHI
Trigger: AATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR TCA 90 bp CATCTGGCTCAGGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTaGCTTGGAGGCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTG +
Preference number: 1 (lower is better)
Translates to: HLAQVLLLPDSPRSA*LGGSGLGARKQHIL
Trigger: CAAAATATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACCTGAGCCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 90 bp GCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTaGGCAATGGCTCCCTTCCTGGACATATTAAAGGACTTGTACTAC +
Preference number: 1 (lower is better)
Translates to: AALGSSRGCGGDMDH*AMAPFLDILKDLYY
Trigger: GTAGTACAAGTCCTTTAATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR GCA 90 bp AAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATaGAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCA +
Preference number: 1 (lower is better)
Translates to: KLQQFAGILDFLGGT*SAGLKQGMWWRYGP
Trigger: TGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 90 bp TGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTaGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTT +
Preference number: 1 (lower is better)
Translates to: CFQIHQGLPDLEAVG*GHVSSIFCALLFKL
Trigger: AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 90 bp AGTTGGTGTGTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCTCTGAGAGCTGAATGGCTGAGTGTC +
Preference number: 1 (lower is better)
Translates to: SWCVKSEQGQIRVLR*LFSTMSLRAEWLSV
Trigger: GACACTCAGCCATTCAGCTCTCAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTACACACCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR GCA 90 bp GCTCCCTTCCTGGACATATTAAAGGACTTGTACTACCAGCACAAATaGCAGTGTGAGAGAATTATTGGTCCTCGTTTCTGGAAACAAATG +
Preference number: 1 (lower is better)
Translates to: APFLDILKDLYYQHK*QCERIIGPRFWKQM
Trigger: CATTTGTTTCCAGAAACGAGGACCAATAATTCTCTCACACTGGCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTCCAGGAAGGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 90 bp CAGAGAATTCTTCCAAAGTGTAAAAGGTGTTTCTGTCCCAAGAGTTaGTGTGTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGG +
Preference number: 1 (lower is better)
Translates to: QRILPKCKRCFCPKS*CVKSEQGQIRVLRW
Trigger: CCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTACACACCAACTCTTGGGACAGAAACACCTTTTACACTTTGGAAGAATTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR GCA 90 bp CTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATATCATaGTTAATAATTCAGTCCTATCCCACATATGTTAGGTGCTGGCTC +
Preference number: 1 (lower is better)
Translates to: LETNDMGSLGHQTIS*LIIQSYPTYVRCWL
Trigger: GAGCCAGCACCTAACATATGTGGGATAGGACTGAATTATTAAGCATGATATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 90 bp TACCAGCACAAATGCCAGTGTGAGAGAATTATTGGTCCTCGTTTCTaGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATATCAT +
Preference number: 1 (lower is better)
Translates to: YQHKCQCERIIGPRF*KQMTWAVWVIRQYH
Trigger: ATGATATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATTCTCTCACACTGGCATTTGTGCTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR TCA 90 bp AATGCCAGTGTGAGAGAATTATTGGTCCTCGTTTCTGGAAACAAATaGCATGGGCAGTTTGGGTCATCAGACAATATCATGCTTAATAAT +
Preference number: 1 (lower is better)
Translates to: NASVRELLVLVSGNK*HGQFGSSDNIMLNN
Trigger: ATTATTAAGCATGATATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATTCTCTCACACTGGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp TGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGTGGAAGGAGCCTGTGGGGGTCGGGCTaGTGCAGATGGCCAGCGGGA +
Preference number: 2 (lower is better)
Translates to: WPQGGGDEASVGRGCGRSLWGSG*CRWPAG
Trigger: TCCCGCTGGCCATCTGCATCAGCCCGACCCCCACAG...GCTCCTTCCACACCCTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR-3UTR TCA 90 bp TGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGTGGAAGGAGCATTTTCAGGCCTGGATaGGAGGCAGGGCGAGTGAGC +
Preference number: 2 (lower is better)
Translates to: WPQGGGDEASVGRGCGRSIFRPG*EAGRVS
Trigger: GCTCACTCGCCCTGCCTCTCATCCAGGCCTGAAAAT...GCTCCTTCCACACCCTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR-3UTR TCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGCATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCC +
Preference number: 2 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVEHRAAV*GDEHAS
Trigger: GGAAGCATGCTCATCTCCTCACACTGCTGCCCTATG...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATTCACCAAGGTCTaGCTGACTTGGAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWRFTKV*LTWRQW
Trigger: CCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATTGGAGGCAGTGGGCTaGGGGCACGTAAGCAGCATA +
Preference number: 2 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQLEAVG*GHVSSI
Trigger: TATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAA...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGAGGCCATCAGAGATaGTGTGCATCTGGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLGGHQR*CASGSG
Trigger: ACCTGAGCCAGATGCACACCATCTCTGATGGCCTCC...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGGAGGCCATCAGAGATaGTGTGCATCTGGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVGGHQR*CASGSG
Trigger: ACCTGAGCCAGATGCACACCATCTCTGATGGCCTCC...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGGAGGCCATCAGAGATaGTGTGCATCTGGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGGGHQR*CASGSG
Trigger: ACCTGAGCCAGATGCACACCATCTCTGATGGCCTCC...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGTGGACCACTGGGCAATaGCTCCCTTCCTGGACATAT +
Preference number: 2 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWWTTGQ*LPSWTY
Trigger: ATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCA...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAACATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCC +
Preference number: 2 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQHRAAV*GDEHAS
Trigger: GGAAGCATGCTCATCTCCTCACACTGCTGCCCTATG...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGAGATTCACCAAGGTCTaGCTGACTTGGAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLRFTKV*LTWRQW
Trigger: CCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCT...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGCCCACATATGTTAGGTaGTGGCTCTCCCAATCTGGT +
Preference number: 2 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWPTYVR*WLSQSG
Trigger: ACCAGATTGGGAGAGCCAGCACCTAACATATGTGGG...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGTGGACCACTGGGCAATaGCTCCCTTCCTGGACATAT +
Preference number: 2 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVWTTGQ*LPSWTY
Trigger: ATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCA...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp GTCTTCAATTGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGTTATGATTTTCAGGCCTaGATGAGAGGCAGGGCGAGT +
Preference number: 2 (lower is better)
Translates to: VFNWPQGGGDEASVGRGCYDFQA*MRGRAS
Trigger: ACTCGCCCTGCCTCTCATCCAGGCCTGAAAATCATA...ACACCCTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCAATTGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR-3UTR TCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGCATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCC +
Preference number: 2 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWHRAAV*GDEHAS
Trigger: GGAAGCATGCTCATCTCCTCACACTGCTGCCCTATG...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGGCACAAATGCCAGTGTaGGAGAATTATTGGTCCTCG +
Preference number: 2 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVEAQMPV*ENYWSS
Trigger: CGAGGACCAATAATTCTCTCACACTGGCATTTGTGC...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGACCCACATATGTTAGGTaGTGGCTCTCCCAATCTGGT +
Preference number: 2 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGPTYVR*WLSQSG
Trigger: ACCAGATTGGGAGAGCCAGCACCTAACATATGTGGG...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp TCCAGTCTTGATGATGCTGAGTCTTCAATTGGCCACAGGGCGGAGGAGACGAGGTCCACAGCCTGCAGGTaGACACACGTACTGCCCAAG +
Preference number: 2 (lower is better)
Translates to: SSLDDAESSIGHRAEETRSTACR*THVLPK
Trigger: CTTGGGCAGTACGTGTGTGCACCTGCAGGCTGTGGA...CCTCGTCTCCTCCGCCCTGTGGCCAATTGAAGACTCAGCATCATCAAGACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR CAA 90 bp TGGCTCAGGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTaGGAGGCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCA +
Preference number: 2 (lower is better)
Translates to: WLRSSCFQIHQGLPD*EAVGWGHVSSIFCA
Trigger: TGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACCTGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACAAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTNVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGCAGTGTGAGGAGATaGGCATGCTTCCAAAACAAA +
Preference number: 2 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWSSVRR*ACFQNK
Trigger: TTTGTTTTGGAAGCATGCTCATCTCCTCACACTGCT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGCTCCCAATCTGGTCATaGCAGATCCTAATTGTTCTG +
Preference number: 2 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVELPIWS*QILIVL
Trigger: CAGAACAATTAGGATCTGTCATGACCAGATTGGGAG...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGCACAAATGCCAGTGTaGGAGAATTATTGGTCCTCG +
Preference number: 2 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVAQMPV*ENYWSS
Trigger: CGAGGACCAATAATTCTCTCACACTGGCATTTGTGC...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp CCAGTCTTGATGATGCTGAGTCTTCAATTGGCCACAGGGCGGAGGAGACGAGGCCAGCGGGATGCTCTATaGTTTTCAGGCCTGGATGAG +
Preference number: 2 (lower is better)
Translates to: PVLMMLSLQLATGRRRRGQRDAL*FSGLDE
Trigger: CTCATCCAGGCCTGAAAATCATAGAGCATCCCGCTG...GCCTCGTCTCCTCCGCCCTGTGGCCAATTGAAGACTCAGCATCATCAAGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR-3UTR CCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGAGAAAGAGGAAGAGTTaGCAATCAGAGACTGAGCCA +
Preference number: 2 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVERKRKS*QSETEP
Trigger: TGGCTCAGTCTCTGATTGCCAACTCTTCCTCTTTCT...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCGAGATGGTGTGCATCTaGCTCAGGTCCTCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLEMVCI*LRSSCF
Trigger: GAAGCAAGAGGACCTGAGCCAGATGCACACCATCTC...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCTGGACCACTGGGCAATaGCTCCCTTCCTGGACATAT +
Preference number: 2 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLWTTGQ*LPSWTY
Trigger: ATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCA...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLNVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGAGCAGTGTGAGGAGATaGGCATGCTTCCAAAACAAA +
Preference number: 2 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVSSVRR*ACFQNK
Trigger: TTTGTTTTGGAAGCATGCTCATCTCCTCACACTGCT...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACAGCACAAATGCCAGTGTaGGAGAATTATTGGTCCTCG +
Preference number: 2 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTAQMPV*ENYWSS
Trigger: CGAGGACCAATAATTCTCTCACACTGGCATTTGTGC...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp TGCTCTGTCCCTCCAGTCTTGATGATGCTGAGTCTTCAATTGGCCACAGGGCGGAGATGGCCAGCGGGATaGTCTATGATTTTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: CSVPPVLMMLSLQLATGRRWPAG*SMIFRP
Trigger: AGGCCTGAAAATCATAGAGCATCCCGCTGGCCATCT...CCGCCCTGTGGCCAATTGAAGACTCAGCATCATCAAGACTGGAGGGACAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR-3UTR CCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGATGACATGGGCAGTTTaGGTCATCAGACAATATCAT +
Preference number: 2 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWMTWAV*VIRQYH
Trigger: ATGATATTGTCTGATGACCCAAACTGCCCATGTCAT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAGCAGTGTGAGGAGATaGGCATGCTTCCAAAACAAA +
Preference number: 2 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLSSVRR*ACFQNK
Trigger: TTTGTTTTGGAAGCATGCTCATCTCCTCACACTGCT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTCATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCC +
Preference number: 2 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLHRAAV*GDEHAS
Trigger: GGAAGCATGCTCATCTCCTCACACTGCTGCCCTATG...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CAA 90 bp GAACATGGTATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTaGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: EHGIKLQQFAGILDF*GGTCSAGLKQGMWW
Trigger: CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATACCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGAGATTCACCAAGGTCTaGCTGACTTGGAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALRFTKV*LTWRQW
Trigger: CCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCT...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAAGATTCACCAAGGTCTaGCTGACTTGGAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRRFTKV*LTWRQW
Trigger: CCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCT...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGTACTACCAGCACAAATaGCAGTGTGAGAGAATTATT +
Preference number: 2 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVYYQHK*QCERII
Trigger: AATAATTCTCTCACACTGGCATTTGTGCTGGTAGTA...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGATTGGAGGCAGTGGGCTaGGGGCACGTAAGCAGCATA +
Preference number: 2 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGLEAVG*GHVSSI
Trigger: TATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAA...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCTGGAAACAAATGACATaGGCAGTTTGGGTCATCAGA +
Preference number: 2 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLWKQMT*AVWVIR
Trigger: TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCA...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLNVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACATTCTGTCCCAAGAGTTaGTGTGTAAAATCAGAACAA +
Preference number: 2 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTFCPKS*CVKSEQ
Trigger: TTGTTCTGATTTTACACACCAACTCTTGGGACAGAA...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCGATGTGGTGGAGATATaGACCACTGGGCAATGGCTC +
Preference number: 2 (lower is better)
Translates to: KITAICRHSGLLGRDMQRDVVEI*TTGQWL
Trigger: GAGCCATTGCCCAGTGGTCCATATCTCCACCACATC...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: KITAICRHSGLLGRDMQRNVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGCACAAATGCCAGTGTaGGAGAATTATTGGTCCTCG +
Preference number: 2 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALAQMPV*ENYWSS
Trigger: CGAGGACCAATAATTCTCTCACACTGGCATTTGTGC...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCTACTACCAGCACAAATaGCAGTGTGAGAGAATTATT +
Preference number: 2 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLYYQHK*QCERII
Trigger: AATAATTCTCTCACACTGGCATTTGTGCTGGTAGTA...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCT +
Preference number: 2 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLIRVLR*LFSTMS
Trigger: AGACATTGTACTAAACAACCACCTTAACACCCTGAT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGTTCTGTCCCAAGAGTTaGTGTGTAAAATCAGAACAA +
Preference number: 2 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWFCPKS*CVKSEQ
Trigger: TTGTTCTGATTTTACACACCAACTCTTGGGACAGAA...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGGGAGATATGGACCACTaGGCAATGGCTCCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: YKITAICRHSGLLGRDMQGDMDH*AMAPFL
Trigger: CAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCC...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CAA 90 bp ATGGACCACTGGGCAATGGCTCCCTTCCTGGACATATTAAAGGACTaGTACTACCAGCACAAATGCCAGTGTGAGAGAATTATTGGTCCT +
Preference number: 2 (lower is better)
Translates to: MDHWAMAPFLDILKD*YYQHKCQCERIIGP
Trigger: AGGACCAATAATTCTCTCACACTGGCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRNVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACCATCAGAGATGGTGTaGATCTGGCTCAGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRPSEMV*IWLRSS
Trigger: AGAGGACCTGAGCCAGATGCACACCATCTCTGATGG...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR GCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATACCCACATATGTTAGGTaGTGGCTCTCCCAATCTGGT +
Preference number: 2 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIPTYVR*WLSQSG
Trigger: ACCAGATTGGGAGAGCCAGCACCTAACATATGTGGG...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGGAGATGGTGTGCATCTaGCTCAGGTCCTCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQEMVCI*LRSSCF
Trigger: GAAGCAAGAGGACCTGAGCCAGATGCACACCATCTC...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGGAGATGGTGTGCATCTaGCTCAGGTCCTCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: YKITAICRHSGLLGRDMQEMVCI*LRSSCF
Trigger: GAAGCAAGAGGACCTGAGCCAGATGCACACCATCTC...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGTGGAAACAAATGACATaGGCAGTTTGGGTCATCAGA +
Preference number: 2 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALWKQMT*AVWVIR
Trigger: TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCA...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATAGCAGTGTGAGGAGATaGGCATGCTTCCAAAACAAA +
Preference number: 2 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNSSVRR*ACFQNK
Trigger: TTTGTTTTGGAAGCATGCTCATCTCCTCACACTGCT...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGATGACATGGGCAGTTTaGGTCATCAGACAATATCAT +
Preference number: 2 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALMTWAV*VIRQYH
Trigger: ATGATATTGTCTGATGACCCAAACTGCCCATGTCAT...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAAGAAAGAGGAAGAGTTaGCAATCAGAGACTGAGCCA +
Preference number: 2 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQRKRKS*QSETEP
Trigger: TGGCTCAGTCTCTGATTGCCAACTCTTCCTCTTTCT...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGAGAAAGAGGAAGAGTTaGCAATCAGAGACTGAGCCA +
Preference number: 2 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRRKRKS*QSETEP
Trigger: TGGCTCAGTCTCTGATTGCCAACTCTTCCTCTTTCT...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAAGAAAGAGGAAGAGTTaGCAATCAGAGACTGAGCCA +
Preference number: 2 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIRKRKS*QSETEP
Trigger: TGGCTCAGTCTCTGATTGCCAACTCTTCCTCTTTCT...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCATGACATGGGCAGTTTaGGTCATCAGACAATATCAT +
Preference number: 2 (lower is better)
Translates to: KITAICRHSGLLGRDMQRMTWAV*VIRQYH
Trigger: ATGATATTGTCTGATGACCCAAACTGCCCATGTCAT...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGCTCCCAATCTGGTCATaGCAGATCCTAATTGTTCTG +
Preference number: 2 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQLPIWS*QILIVL
Trigger: CAGAACAATTAGGATCTGTCATGACCAGATTGGGAG...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR TCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCTCCCAATCTGGTCATaGCAGATCCTAATTGTTCTG +
Preference number: 2 (lower is better)
Translates to: YKITAICRHSGLLGRDMQLPIWS*QILIVL
Trigger: CAGAACAATTAGGATCTGTCATGACCAGATTGGGAG...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCT +
Preference number: 2 (lower is better)
Translates to: KITAICRHSGLLGRDMQRIRVLR*LFSTMS
Trigger: AGACATTGTACTAAACAACCACCTTAACACCCTGAT...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCT +
Preference number: 2 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRIRVLR*LFSTMS
Trigger: AGACATTGTACTAAACAACCACCTTAACACCCTGAT...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CAA 90 bp GAGAATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTaGGGTCATCAGACAATATCATGCTTAATAATTCAGTCCTATCCC +
Preference number: 2 (lower is better)
Translates to: ENYWSSFLETNDMGS*GHQTISCLIIQSYP
Trigger: GGGATAGGACTGAATTATTAAGCATGATATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGCAAGGTCTGCCTGACTaGGAGGCAGTGGGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVQGLPD*EAVGWG
Trigger: CCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTG...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 72 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTaGAGATATGGACCACTGGGCAATGGCTCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: GTCSAGLKQGMW*RYGPLGNGSLP
Trigger: AGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 72 bp AGGCCTCAGTGGGGAGAGGGTGTGGAAGGAGCAACTTaGATGTGCCAGTCTTCTATCCTGTGGGGGTCGGGC +
Preference number: 3 (lower is better)
Translates to: RPQWGEGVEGAT*MCQSSILWGSG
Trigger: GCCCGACCCCCACAGGATAGAAGACTGGCACATCCAAGTTGCTCCTTCCACACCCTCTCCCCACTGAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR TCA 72 bp CAGGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTaGCTTGGAGGCAGTGGGCTGGGGGCACGTAAGCAG +
Preference number: 3 (lower is better)
Translates to: QVLLLPDSPRSA*LGGSGLGARKQ
Trigger: CTGCTTACGTGCCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACAAACAGGCACATTGGTTaGGGAGGCCATCAGAGATGG +
Preference number: 3 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTNRHIG*GGHQRW
Trigger: CCATCTCTGATGGCCTCCCAAACCAATGTGCCTGTT...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR GCA 72 bp CAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATaGAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGA +
Preference number: 3 (lower is better)
Translates to: QFAGILDFLGGT*SAGLKQGMWWR
Trigger: TCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAACAGGCACATTGGTTaGGGAGGCCATCAGAGATGG +
Preference number: 3 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLNRHIG*GGHQRW
Trigger: CCATCTCTGATGGCCTCCCAAACCAATGTGCCTGTT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR TCA 72 bp TGGCCAGCGGGATGCTCTATGATTTTCAGGCCTGGATaGGAGGCAGGGCGAGTGAGCTCCATGGAAATACCT +
Preference number: 3 (lower is better)
Translates to: WPAGCSMIFRPG*EAGRVSSMEIP
Trigger: AGGTATTTCCATGGAGCTCACTCGCCCTGCCTCTCATCCAGGCCTGAAAATCATAGAGCATCCCGCTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR TCA 72 bp TGGATGTGCCAGTCTTCTATCCTGTGGGGGTCGGGCTaGTGCAGATGGCCAGCGGGATGCTCTATGATTTTC +
Preference number: 3 (lower is better)
Translates to: WMCQSSILWGSG*CRWPAGCSMIF
Trigger: GAAAATCATAGAGCATCCCGCTGGCCATCTGCATCAGCCCGACCCCCACAGGATAGAAGACTGGCACATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR CCA 72 bp CAGATGGCCAGCGGGATGCTCTATGATTTTCAGGCCTaGATGAGAGGCAGGGCGAGTGAGCTCCATGGAAAT +
Preference number: 3 (lower is better)
Translates to: QMASGMLYDFQA*MRGRASELHGN
Trigger: ATTTCCATGGAGCTCACTCGCCCTGCCTCTCATCCAGGCCTGAAAATCATAGAGCATCCCGCTGGCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR-3UTR CAA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAATGACATGGGCAGTTaGGGTCATCAGACAATATCA +
Preference number: 3 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWNDMGS*GHQTIS
Trigger: TGATATTGTCTGATGACCCAAACTGCCCATGTCATT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR GCA 72 bp CAGGCACATTGGTTTGGGAGGCCATCAGAGATGGTGTaGATCTGGCTCAGGTCCTCTTGCTTCCAGATTCAC +
Preference number: 3 (lower is better)
Translates to: QAHWFGRPSEMV*IWLRSSCFQIH
Trigger: GTGAATCTGGAAGCAAGAGGACCTGAGCCAGATGCACACCATCTCTGATGGCCTCCCAAACCAATGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 72 bp ATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTaGGGGCACGTAAGCAGCATATTTTGTGCACTACTG +
Preference number: 3 (lower is better)
Translates to: IHQGLPDLEAVG*GHVSSIFCALL
Trigger: CAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 72 bp GGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTaGGCAATGGCTCCCTTCCTGGACATATTAAAGGAC +
Preference number: 3 (lower is better)
Translates to: GSSRGCGGDMDH*AMAPFLDILKD
Trigger: GTCCTTTAATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGAATGACATGGGCAGTTaGGGTCATCAGACAATATCA +
Preference number: 3 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLNDMGS*GHQTIS
Trigger: TGATATTGTCTGATGACCCAAACTGCCCATGTCATT...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAGGTCTGCCTGACTaGGAGGCAGTGGGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRQGLPD*EAVGWG
Trigger: CCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTG...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACAAGTGTGAGAGAATTATaGGTCCTCGTTTCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTSVREL*VLVSGN
Trigger: GTTTCCAGAAACGAGGACCAATAATTCTCTCACACT...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGACATATTAAAGGACTaGTACTACCAGCACAAATGC +
Preference number: 3 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVDILKD*YYQHKC
Trigger: GCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTC...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATTTCTGTCCCAAGAGTaGGTGTGTAAAATCAGAACA +
Preference number: 3 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQFLSQE*VCKIRT
Trigger: TGTTCTGATTTTACACACCAACTCTTGGGACAGAAA...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAAGACATATTAAAGGACTaGTACTACCAGCACAAATGC +
Preference number: 3 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQDILKD*YYQHKC
Trigger: GCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTC...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGAAACAGGCACATTGGTTaGGGAGGCCATCAGAGATGG +
Preference number: 3 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGNRHIG*GGHQRW
Trigger: CCATCTCTGATGGCCTCCCAAACCAATGTGCCTGTT...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAAACAGGCACATTGGTTaGGGAGGCCATCAGAGATGG +
Preference number: 3 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQNRHIG*GGHQRW
Trigger: CCATCTCTGATGGCCTCCCAAACCAATGTGCCTGTT...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGAAACAGGCACATTGGTTaGGGAGGCCATCAGAGATGG +
Preference number: 3 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRNRHIG*GGHQRW
Trigger: CCATCTCTGATGGCCTCCCAAACCAATGTGCCTGTT...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGAATGACATGGGCAGTTaGGGTCATCAGACAATATCA +
Preference number: 3 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALNDMGS*GHQTIS
Trigger: TGATATTGTCTGATGACCCAAACTGCCCATGTCATT...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR TCA 72 bp AGCTTAAGCAGAGGGACCTTCCATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCCAAAACAAACTCAAAT +
Preference number: 3 (lower is better)
Translates to: SLSRGTFHRAAV*GDEHASKTNSN
Trigger: ATTTGAGTTTGTTTTGGAAGCATGCTCATCTCCTCACACTGCTGCCCTATGGAAGGTCCCTCTGCTTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR GCA 72 bp CTGGACATATTAAAGGACTTGTACTACCAGCACAAATaGCAGTGTGAGAGAATTATTGGTCCTCGTTTCTGG +
Preference number: 3 (lower is better)
Translates to: LDILKDLYYQHK*QCERIIGPRFW
Trigger: CCAGAAACGAGGACCAATAATTCTCTCACACTGGCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 72 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCTCTGAGAGCTGAATGG +
Preference number: 3 (lower is better)
Translates to: VKSEQGQIRVLR*LFSTMSLRAEW
Trigger: CCATTCAGCTCTCAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CCA 72 bp AAATGCCAGTGTGAGAGAATTATTGGTCCTCGTTTCTaGAAACAAATGACATGGGCAGTTTGGGTCATCAGA +
Preference number: 3 (lower is better)
Translates to: KCQCERIIGPRF*KQMTWAVWVIR
Trigger: TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATTCTCTCACACTGGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATATTTCTGTCCCAAGAGTaGGTGTGTAAAATCAGAACA +
Preference number: 3 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIFLSQE*VCKIRT
Trigger: TGTTCTGATTTTACACACCAACTCTTGGGACAGAAA...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGAATGACATGGGCAGTTaGGGTCATCAGACAATATCA +
Preference number: 3 (lower is better)
Translates to: YKITAICRHSGLLGRDMQNDMGS*GHQTIS
Trigger: TGATATTGTCTGATGACCCAAACTGCCCATGTCATT...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR TCA 72 bp GTGAGAGAATTATTGGTCCTCGTTTCTGGAAACAAATaGCATGGGCAGTTTGGGTCATCAGACAATATCATG +
Preference number: 3 (lower is better)
Translates to: VRELLVLVSGNK*HGQFGSSDNIM
Trigger: CATGATATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATTCTCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR-3UTR CAA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGATTTCTGTCCCAAGAGTaGGTGTGTAAAATCAGAACA +
Preference number: 3 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRFLSQE*VCKIRT
Trigger: TGTTCTGATTTTACACACCAACTCTTGGGACAGAAA...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR GCA 72 bp AATGACATGGGCAGTTTGGGTCATCAGACAATATCATaGTTAATAATTCAGTCCTATCCCACATATGTTAGG +
Preference number: 3 (lower is better)
Translates to: NDMGSLGHQTIS*LIIQSYPTYVR
Trigger: CCTAACATATGTGGGATAGGACTGAATTATTAAGCATGATATTGTCTGATGACCCAAACTGCCCATGTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TTGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGTGGAAGGAGCTGTGGGGGTCGGGCTaGTGCAGATGGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: LATGRRRRGLSGERVWKELWGSG*CRWPAG
Trigger: TCCCGCTGGCCATCTGCATCAGCCCGACCCCCACAG...CTCCTTCCACACCCTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGCACAGCGCGCCCGCCTaGTGCCTGCTGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLHSAPA*CLLPAA
Trigger: GGCAGCAGGCAGCAGGCAGCAGGCGGGCGCGCTGTG...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR GCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACATCCGCCCGCCCCTCCTaGCGCACACTCGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTSARPS*RTLGSP
Trigger: AGGGGAGCCGAGTGTGCGGCAGGAGGGGCGGGCGGA...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR TCA 90 bp TGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGTGGAAGGAGCTGGGTGAATGAACCCTaGGTGACGGATGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: WPQGGGDEASVGRGCGRSWVNEP*VTDAPL
Trigger: CAGGGGTGCATCCGTCACTCAGGGTTCATTCACCCA...GCTCCTTCCACACCCTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGTCTGGGCCTCGAGCTaGTCCAGTCCCTCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVVWASS*SSPSGR
Trigger: TCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGAC...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGTCCCTGCGCTCGGGCTaGGTCTCGGAGGGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVSLRSG*VSEGRV
Trigger: TACTCGGCCCTCCGAGACCCAGCCCGAGCGCAGGGA...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR CCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGCCCTGAAGCCTGCCTaGCACTGGACACGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLALKPA*HWTRGQ
Trigger: CTGGCCCCGTGTCCAGTGCCAGGCAGGCTTCAGGGC...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR TCA 90 bp GCTGAGTCTTCAATTGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGAGAAAACGCGTGGGGTaGCGTCTGGCCCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: AESSIGHRAEETRPQWGERKRVG*RLAQRL
Trigger: CAGACGCTGGGCCAGACGTCACCCCACGCGTTTTCT...CTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCAATTGAAGACTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp GCTGAGTCTTCAATTGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGAGGGGAGCCAGGCTCTaGTGTCAGCACCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: AESSIGHRAEETRPQWGERGARL*CQHPEG
Trigger: CCCTTCTGGGTGCTGACAGCAGAGCCTGGCTCCCCT...CTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCAATTGAAGACTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCGACTTGAGTGCGAGTTaGGACCCCGGGCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLDLSAS*DPGPGP
Trigger: GGGGCCGGGCCCGGGGTCCCAACTCGCACTCAAGTC...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGCGGTGCCCTGAAGCCTaGCTGGCACTGGACACGGGG +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWRCPEA*LALDTG
Trigger: CCCCGTGTCCAGTGCCAGGCAGGCTTCAGGGCACCG...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR GCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGGCCCGGCAGCTCGCCTaGAGCTTGGTATTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVEARQLA*SLVFSK
Trigger: CTTGCTGAATACCAAGCTGCAGGCGAGCTGCCGGGC...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGGTCTGGGCCTCGAGCTaGTCCAGTCCCTCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWVWASS*SSPSGR
Trigger: TCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGAC...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp CGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGTGGAAGGAGCAACTTGGATGTCGGGAACAGCACAGCTaGCTCTGCAGCGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RRRRGLSGERVWKEQLGCREQHS*LCSESG
Trigger: GCCAGACTCGCTGCAGAGGCAGCTGTGCTGTTCCCG...ACATCCAAGTTGCTCCTTCCACACCCTCTCCCCACTGAGGCCTCGTCTCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGGGACATGCAGCGCTaGGCTCAAGCAGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWRDMQR*AQAGDV
Trigger: CACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGTTCTTGGGAGGGACATaGAGCGCTGGGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWFLGGT*SAGLKQ
Trigger: CTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAA...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGCACTCCATCCCCTGCTaGTGGAAGCCTGCTACTTCC +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWHSIPC*WKPATS
Trigger: GGAAGTAGCAGGCTTCCAGCAGCAGGGGATGGAGTG...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp GCTGAGTCTTCAATTGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGCACACACGTACTaGCCAAGCTATCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AESSIGHRAEETRPQWGEGAHTY*PSYPAL
Trigger: CAGAGCCGGATAGCTTGGGCAGTACGTGTGTGCACC...CTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCAATTGAAGACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGTCCCTCGGGCCGATaGCAAACCATGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWSPSGR*QTMVIS
Trigger: GGAGATGACCATGGTTTGCCATCGGCCCGAGGGACT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAAGGGACATGCAGCGCTaGGCTCAAGCAGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGRDMQR*AQAGDV
Trigger: CACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCT...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GGGATGCTCTATGATTTTCAGGCCTGGATGAGAGGCAGGGCGAGTGAGCTCCATTGGAGCAGCCGCTCATaGTGGCGGAGGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GMLYDFQAWMRGRASELHWSSRS*WRRGAR
Trigger: CCTGGCTCCCCTCCGCCACCATGAGCGGCTGCTCCA...ATGGAGCTCACTCGCCCTGCCTCTCATCCAGGCCTGAAAATCATAGAGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR TCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGTTCACGGAGCCTGTCTaGGTGGTGTCGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVEFTEPV*VVSKAL
Trigger: CAATGCCTTCGACACCACTCAGACAGGCTCCGTGAA...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGCATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWHRAAV*GDEHAS
Trigger: GGAAGCATGCTCATCTCCTCACACTGCTGCCCTATG...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGACTCACTCCATCCCCTaGTGCTGGAAGCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVETHSIP*CWKPAT
Trigger: AGTAGCAGGCTTCCAGCAGCAGGGGATGGAGTGAGT...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp GGGTGTGGAAGGAGCAACTTGGATGTGCCAGTCTTCTATCCTGTGGGGGTCGGGACCCAGAAGGGACAGTaGCCACCTTGTGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: GCGRSNLDVPVFYPVGVGTQKGQ*PPCAPQ
Trigger: CTGGGGTGCACAAGGTGGGCACTGTCCCTTCTGGGT...CCCGACCCCCACAGGATAGAAGACTGGCACATCCAAGTTGCTCCTTCCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGGGAGGCCATCAGAGATaGTGTGCATCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWGGHQR*CASGSG
Trigger: ACCTGAGCCAGATGCACACCATCTCTGATGGCCTCC...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGGCATTCTGGACTTCTTaGGAGGGACATGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVEAFWTS*EGHAAL
Trigger: CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGC...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGATGGCAGCGAAGACTTaGGTGCGAGTTGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWMAAKT*VRVGTP
Trigger: CGGGGTCCCAACTCGCACTCAAGTCTTCGCTGCCAT...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCATGGCAGCGAAGACTTaGGTGCGAGTTGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLMAAKT*VRVGTP
Trigger: CGGGGTCCCAACTCGCACTCAAGTCTTCGCTGCCAT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGTTCACGGAGCCTGTCTaGGTGGTGTCGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLFTEPV*VVSKAL
Trigger: CAATGCCTTCGACACCACTCAGACAGGCTCCGTGAA...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGCTGGAGAGACCTCATaGTGTTGTCGTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVAGETS*CCRPPD
Trigger: GTCAGGAGGACGACAACATCATGAGGTCTCTCCAGC...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGCTGGAGAGACCTCATaGTGTTGTCGTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLAGETS*CCRPPD
Trigger: GTCAGGAGGACGACAACATCATGAGGTCTCTCCAGC...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGCCATCAGAGATGGTGTaGATCTGGCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVEPSEMV*IWLRSS
Trigger: AGAGGACCTGAGCCAGATGCACACCATCTCTGATGG...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACATTCTTGGGAGGGACATaGAGCGCTGGGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTFLGGT*SAGLKQ
Trigger: CTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAA...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGCTGCTGCTGGAAGCCTaGTACTTCCATCAACCATCC +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVELLLEA*YFHQPS
Trigger: GGATGGTTGATGGAAGTAGCAGGCTTCCAGCAGCAG...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACAAGTCCCTCGGGCCGATaGCAAACCATGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTSPSGR*QTMVIS
Trigger: GGAGATGACCATGGTTTGCCATCGGCCCGAGGGACT...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGTGGACCACTGGGCAATaGCTCCCTTCCTGGACATAT +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVEWTTGQ*LPSWTY
Trigger: ATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCA...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGCATTCTGGACTTCTTaGGAGGGACATGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVAFWTS*EGHAAL
Trigger: CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGC...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TGCTCTGTCCCTCCAGTCTTGATGATGCTGAGTCTTCAATTGGCCACAGGGCGGGCCTGCCTGGGTGAATaGACCCTGAGTGACGGATGC +
Preference number: 4 (lower is better)
Translates to: CSVPPVLMMLSLQLATGRACLGE*TLSDGC
Trigger: GCATCCGTCACTCAGGGTTCATTCACCCAGGCAGGC...CCGCCCTGTGGCCAATTGAAGACTCAGCATCATCAAGACTGGAGGGACAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGCGCCTTTGTTTGGTTTaGAGAGATGAGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWRLCLV*RDEKVP
Trigger: GGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCG...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAGTCTGGGCCTCGAGCTaGTCCAGTCCCTCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRVWASS*SSPSGR
Trigger: TCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGAC...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAAGAAGACGTCCACATaGTGCCTTGGAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWKKTST*CLGVSS
Trigger: AGAGGACACTCCAAGGCAGCATGTGGACGTCTTCTT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGACCATCAGAGATGGTGTaGATCTGGCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGPSEMV*IWLRSS
Trigger: AGAGGACCTGAGCCAGATGCACACCATCTCTGATGG...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GGGGAGAGGGTGTGGAAGGAGCAACTTGGATGTGCCAGTCTTCTATCCTGTGGGCAAGCTATCCGGCTCTaGGGGCCCCAGTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: GERVWKEQLGCASLLSCGQAIRL*GPQFHF
Trigger: AAAGTGGAACTGGGGCCCGCAGAGCCGGATAGCTTG...CCCACAGGATAGAAGACTGGCACATCCAAGTTGCTCCTTCCACACCCTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp TTCAATTGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGTGGAGGAGCAACTTGGATGTaGCAGTCTTCTATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FNWPQGGGDEASVGRGCGGATWM*QSSILW
Trigger: CCACAGGATAGAAGACTGGCACATCCAAGTTGCTCC...TCCACACCCTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCAATTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGACCAAGCCTCCCTTCCTaGTGTTCTAAAGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGPSLPS*CSKVHG
Trigger: ACCGTGCACTTTAGAACAGCAGGAAGGGAGGCTTGG...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636734.1
CDS-3UTR CCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCGACTTGAGTGCGAGTTaGGACCCCGGGCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRDLSAS*DPGPGP
Trigger: GGGGCCGGGCCCGGGGTCCCAACTCGCACTCAAGTC...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACATTGGTGAAGTTGGTCTaGGCCTCGAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTLVKLV*ASSCSS
Trigger: ACTGGAGCAGCTCGAGGCCCAGACCAACTTCACCAA...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATTGGTGAAGTTGGTCTaGGCCTCGAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQLVKLV*ASSCSS
Trigger: ACTGGAGCAGCTCGAGGCCCAGACCAACTTCACCAA...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGTTGGAGGCAGTGGGCTaGGGGCACGTAAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWLEAVG*GHVSSI
Trigger: TATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAA...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAAGGAGGCCATCAGAGATaGTGTGCATCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQGGHQR*CASGSG
Trigger: ACCTGAGCCAGATGCACACCATCTCTGATGGCCTCC...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACAGGAGATATGGACCACTaGGCAATGGCTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTGDMDH*AMAPFL
Trigger: CAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCC...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGATGTGGTGGAGATATaGACCACTGGGCAATGGCTC +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVDVVEI*TTGQWL
Trigger: GAGCCATTGCCCAGTGGTCCATATCTCCACCACATC...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAGTACCAATCATGAATaGACAGAGCCCGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLSTNHE*TEPGPR
Trigger: GCGCGGTCCGGGCTCTGTTCATTCATGATTGGTACT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR TCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCGCCGAGTACCAATCATaGATGAACAGAGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLAEYQS*MNRART
Trigger: GGTCCGGGCTCTGTTCATTCATGATTGGTACTCGGC...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR TCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGTGGGGCACTCATTTTTaGAGCCTCGATAAAGGACCT +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVEWGTHF*SLDKGP
Trigger: AGGTCCTTTATCGAGGCTTCAAAAATGAGTGCCCCA...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGTGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACG +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLWCRRH*RGNGHT
Trigger: CGTATGCCCATTACCTCTTCAATGCCTTCGACACCA...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTTTCACGGAGCCTGTCTaGGTGGTGTCGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWAFTEPV*VVSKAL
Trigger: CAATGCCTTCGACACCACTCAGACAGGCTCCGTGAA...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVNVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAACACAGCGCGCCCGCCTaGTGCCTGCTGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQHSAPA*CLLPAA
Trigger: GGCAGCAGGCAGCAGGCAGCAGGCGGGCGCGCTGTG...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR GCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGCGCCTTTGTTTGGTTTaGAGAGATGAGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLRLCLV*RDEKVP
Trigger: GGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCG...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAACCATCAGAGATGGTGTaGATCTGGCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQPSEMV*IWLRSS
Trigger: AGAGGACCTGAGCCAGATGCACACCATCTCTGATGG...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGCCCACATATGTTAGGTaGTGGCTCTCCCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLPTYVR*WLSQSG
Trigger: ACCAGATTGGGAGAGCCAGCACCTAACATATGTGGG...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GGGATGCTCTATGATTTTCAGGCCTGGATGAGAGGCAGGGCGAGTGAGCTCCATTCCACAGCCTGCAGGTaGACACACGTACTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GMLYDFQAWMRGRASELHSTACR*THVLPK
Trigger: CTTGGGCAGTACGTGTGTGCACCTGCAGGCTGTGGA...ATGGAGCTCACTCGCCCTGCCTCTCATCCAGGCCTGAAAATCATAGAGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp CGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGTGGAAGGAGCAACTTGGATGTAGATGGCCAGCGGGATaGTCTATGATTTTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RRRRGLSGERVWKEQLGCRWPAG*SMIFRP
Trigger: AGGCCTGAAAATCATAGAGCATCCCGCTGGCCATCT...ACATCCAAGTTGCTCCTTCCACACCCTCTCCCCACTGAGGCCTCGTCTCCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGAGGGTCGCCTTTGTTTaGTTTGCAGAGATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVERVAFV*FAEMRR
Trigger: CCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCT...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGCCGATGGCAAACCATaGTCATCTCCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLADGKP*SSPAHL
Trigger: AAGATGAGCTGGAGATGACCATGGTTTGCCATCGGC...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCTTGGTGAAGTTGGTCTaGGCCTCGAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLLVKLV*ASSCSS
Trigger: ACTGGAGCAGCTCGAGGCCCAGACCAACTTCACCAA...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAATGGGCATACGTGCTaGCATCTCCATGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWNGHTC*HLHEGK
Trigger: TTTTCCCTCATGGAGATGCCAGCACGTATGCCCATT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328939.9
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGTCTCTGAGAGCTGAATaGCTGAGTGTCACCAGTTAC +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWSLRAE*LSVTSY
Trigger: GTAACTGGTGACACTCAGCCATTCAGCTCTCAGAGA...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCGGAGATATGGACCACTaGGCAATGGCTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLGDMDH*AMAPFL
Trigger: CAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCC...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACAGATGTGGTGGAGATATaGACCACTGGGCAATGGCTC +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTDVVEI*TTGQWL
Trigger: GAGCCATTGCCCAGTGGTCCATATCTCCACCACATC...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAATGAGAAGGTGCCCATaGCGGCCCCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRMRRCP*RPPWQR
Trigger: TCGCTGCCATGGGGGCCGTCATGGGCACCTTCTCAT...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGTGGGGCACTCATTTTTaGAGCCTCGATAAAGGACCT +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVWGTHF*SLDKGP
Trigger: AGGTCCTTTATCGAGGCTTCAAAAATGAGTGCCCCA...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACATGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACG +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTWCRRH*RGNGHT
Trigger: CGTATGCCCATTACCTCTTCAATGCCTTCGACACCA...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAAAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQNVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGCTGCCTGCTGCCTGCTaGCAGCGCTCGGGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLLPAAC*QRSGRE
Trigger: CTCTCGCCCCGAGCGCTGGCAGCAGGCAGCAGGCAG...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328939.9
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGCTGCTGCCTGCTGCCTaGTGCCAGCGCTCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLLLPAA*CQRSGR
Trigger: TCGCCCCGAGCGCTGGCAGCAGGCAGCAGGCAGCAG...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328939.9
CDS-3UTR GCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGACAGCGAAGACTTGAGTaGGAGTTGGGACCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRQRRLE*ELGPRA
Trigger: GGCCCGGGGTCCCAACTCGCACTCAAGTCTTCGCTG...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACACGCCTTTGTTTGGTTTaGAGAGATGAGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTRLCLV*RDEKVP
Trigger: GGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCG...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACAAAGACGTCCACATGCTaGCTTGGAGTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTKTSTC*LGVSSL
Trigger: CAAAGAGGACACTCCAAGGCAGCATGTGGACGTCTT...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCCCATCAGAGATGGTGTaGATCTGGCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLPSEMV*IWLRSS
Trigger: AGAGGACCTGAGCCAGATGCACACCATCTCTGATGG...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGCCATCAGAGATGGTGTaGATCTGGCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWPSEMV*IWLRSS
Trigger: AGAGGACCTGAGCCAGATGCACACCATCTCTGATGG...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAAGGTAATGGGCATACGTaGTGGCATCTACAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQGNGHT*WHLQGR
Trigger: TCTGCCTTGTAGATGCCAGCACGTATGCCCATTACC...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390656.8
CDS-3UTR CCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGTTGTCTACTCTGAATTaGAGGAGAGAAAAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLLSTLN*RREKRP
Trigger: CGGGCGCTTTTCTCTCCTCCAATTCAGAGTAGACAA...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAGACTTGAGTGCGAGTTaGGACCCCGGGCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQDLSAS*DPGPGP
Trigger: GGGGCCGGGCCCGGGGTCCCAACTCGCACTCAAGTC...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAAGCCGATGGCAAACCATaGTCATCTCCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQADGKP*SSPAHL
Trigger: AAGATGAGCTGGAGATGACCATGGTTTGCCATCGGC...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGTGGACCACTGGGCAATaGCTCCCTTCCTGGACATAT +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWWTTGQ*LPSWTY
Trigger: ATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCA...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCGATGTGGTGGAGATATaGACCACTGGGCAATGGCTC +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLDVVEI*TTGQWL
Trigger: GAGCCATTGCCCAGTGGTCCATATCTCCACCACATC...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAATTTGCAGGCATTCTaGACTTCTTGGGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWNLQAF*TSWEGH
Trigger: ATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATGCTCTGTCCCTCCAGTCTTGATGATGCTGAGTCTTCAATTGGCCACAGGGCGCCTCTGCAGCGAGTCTaGCTTCTGCATCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: MLCPSSLDDAESSIGHRAPLQRV*LLHPES
Trigger: GCTCTCTGGATGCAGAAGCCAGACTCGCTGCAGAGG...CGCCCTGTGGCCAATTGAAGACTCAGCATCATCAAGACTGGAGGGACAGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CCA 90 bp TTCTATCCTGTGGGGGTCGGGCTGATGCAGATGGCCAGCGGGATGCTCTATGATAGTGGGGAGAGGGTGTaGAAGGAGCAACTTGGATGT +
Preference number: 4 (lower is better)
Translates to: FYPVGVGLMQMASGMLYDSGERV*KEQLGC
Trigger: ACATCCAAGTTGCTCCTTCCACACCCTCTCCCCACT...ATCATAGAGCATCCCGCTGGCCATCTGCATCAGCCCGACCCCCACAGGATAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR TCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGCCGAGGACGGTGCCCTaGAGCCTGCCTGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRPRTVP*SLPGTG
Trigger: TCCAGTGCCAGGCAGGCTTCAGGGCACCGTCCTCGG...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR TCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGTGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACG +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWWCRRH*RGNGHT
Trigger: CGTATGCCCATTACCTCTTCAATGCCTTCGACACCA...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGTTGGAGTGTCCTCTTTaGGCACAGGATATGTGTATT +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVELECPL*AQDMCI
Trigger: AATACACATATCCTGTGCTCAAAGAGGACACTCCAA...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGGTGTCACCAGTTACATaGCATTTTGAAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWVSPVT*HFETAG
Trigger: TCCAGCTGTTTCAAAATGTCATGTAACTGGTGACAC...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWANVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGTTTCTGGAAACAAATaGCATGGGCAGTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVVSGNK*HGQFGS
Trigger: TGACCCAAACTGCCCATGTCATTTGTTTCCAGAAAC...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAAGCACAAATGCCAGTGTaGGAGAATTATTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQAQMPV*ENYWSS
Trigger: CGAGGACCAATAATTCTCTCACACTGGCATTTGTGC...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCACAGGGCCGAGGACGGTaGCCTGAAGCCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRAQGRGR*PEACLA
Trigger: TGCCAGGCAGGCTTCAGGGCACCGTCCTCGGCCCTG...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR GCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAGCCCGGCAGCTCGCCTaGAGCTTGGTATTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRARQLA*SLVFSK
Trigger: CTTGCTGAATACCAAGCTGCAGGCGAGCTGCCGGGC...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGGTCTGGGCCTCGAGCTaGTCCAGTCCCTCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLVWASS*SSPSGR
Trigger: TCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGAC...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGAAGACGTCCACATGCTaGCTTGGAGTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWKTSTC*LGVSSL
Trigger: CAAAGAGGACACTCCAAGGCAGCATGTGGACGTCTT...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGACGTCCACATGCTaGCTTGGAGTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLKTSTC*LGVSSL
Trigger: CAAAGAGGACACTCCAAGGCAGCATGTGGACGTCTT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGAAGACGTCCACATaGTGCCTTGGAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLKKTST*CLGVSS
Trigger: AGAGGACACTCCAAGGCAGCATGTGGACGTCTTCTT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAGCCCTGAAGCCTGCCTaGCACTGGACACGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRAALKPA*HWTRGQ
Trigger: CTGGCCCCGTGTCCAGTGCCAGGCAGGCTTCAGGGC...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR CCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACATTGTCTACTCTGAATTaGAGGAGAGAAAAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTLSTLN*RREKRP
Trigger: CGGGCGCTTTTCTCTCCTCCAATTCAGAGTAGACAA...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGGGAAAGAAATCCCCGTaGTTTGTCTACTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVEGKKSP*FVYSEL
Trigger: CAATTCAGAGTAGACAAACCACGGGGATTTCTTTCC...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGGCCGATGGCAAACCATaGTCATCTCCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWADGKP*SSPAHL
Trigger: AAGATGAGCTGGAGATGACCATGGTTTGCCATCGGC...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAAGAAAGAGGAAGAGTTaGCAATCAGAGACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGRKRKS*QSETEP
Trigger: TGGCTCAGTCTCTGATTGCCAACTCTTCCTCTTTCT...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTAGGGACATGCAGCGCTaGGCTCAAGCAGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLRDMQR*AQAGDV
Trigger: CACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCT...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGAATTTGCAGGCATTCTaGACTTCTTGGGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLNLQAF*TSWEGH
Trigger: ATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATT...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGAATTTGCAGGCATTCTaGACTTCTTGGGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVNLQAF*TSWEGH
Trigger: ATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATT...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CCTCAGTGGGGAGAGGGTGTGGAAGGAGCAACTTGGATGTGCCAGTCTTCTATCCAAGCTTGCATCTTTTaGAGCAGCCGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PQWGEGVEGATWMCQSSIQACIF*SSRSWW
Trigger: CCACCATGAGCGGCTGCTCCAAAAGATGCAAGCTTG...GATAGAAGACTGGCACATCCAAGTTGCTCCTTCCACACCCTCTCCCCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CCA 90 bp TTCTATCCTGTGGGGGTCGGGCTGATGCAGATGGCCAGCGGGATGCTCTATGATTATGATTTTCAGGCCTaGATGAGAGGCAGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: FYPVGVGLMQMASGMLYDYDFQA*MRGRAS
Trigger: ACTCGCCCTGCCTCTCATCCAGGCCTGAAAATCATA...ATCATAGAGCATCCCGCTGGCCATCTGCATCAGCCCGACCCCCACAGGATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR TCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTTGGGGCACTCATTTTTaGAGCCTCGATAAAGGACCT +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWAWGTHF*SLDKGP
Trigger: AGGTCCTTTATCGAGGCTTCAAAAATGAGTGCCCCA...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGTTGGAGTGTCCTCTTTaGGCACAGGATATGTGTATT +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLLECPL*AQDMCI
Trigger: AATACACATATCCTGTGCTCAAAGAGGACACTCCAA...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGTGTCACCAGTTACATaGCATTTTGAAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLVSPVT*HFETAG
Trigger: TCCAGCTGTTTCAAAATGTCATGTAACTGGTGACAC...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGCGGTGCCCTGAAGCCTaGCTGGCACTGGACACGGGG +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQRCPEA*LALDTG
Trigger: CCCCGTGTCCAGTGCCAGGCAGGCTTCAGGGCACCG...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGGGGAGGACCTCAGGATaGCAGGGCCGGGACAGCACT +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLGRTSG*QGRDST
Trigger: AGTGCTGTCCCGGCCCTGGCATCCTGAGGTCCTCCC...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR CCA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGGAAAGAAATCCCCGTaGTTTGTCTACTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGGKKSP*FVYSEL
Trigger: CAATTCAGAGTAGACAAACCACGGGGATTTCTTTCC...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTAGGGTCGCCTTTGTTTaGTTTGCAGAGATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWARVAFV*FAEMRR
Trigger: CCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCT...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAATGGGCATACGTGCTaGCATCTCCATGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLNGHTC*HLHEGK
Trigger: TTTTCCCTCATGGAGATGCCAGCACGTATGCCCATT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328939.9
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGTCTCTGAGAGCTGAATaGCTGAGTGTCACCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWSLRAE*LSVTSY
Trigger: GTAACTGGTGACACTCAGCCATTCAGCTCTCAGAGA...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTTCTCTGAGAGCTGAATaGCTGAGTGTCACCAGTTAC +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWASLRAE*LSVTSY
Trigger: GTAACTGGTGACACTCAGCCATTCAGCTCTCAGAGA...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGATGGAAACAAATGACATaGGCAGTTTGGGTCATCAGA +
Preference number: 4 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGWKQMT*AVWVIR
Trigger: TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCA...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGATTGGTCCTCGTTTCTaGAAACAAATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLIGPRF*KQMTWA
Trigger: TGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCAGGGACATGCAGCGCTaGGCTCAAGCAGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRRDMQR*AQAGDV
Trigger: CACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCT...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AACTTGGATGTGCCAGTCTTCTATCCTGTGGGGGTCGGGCTGATGCAGATGGCCGTGGAAGGAGCAACTTaGATGTGCCAGTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: NLDVPVFYPVGVGLMQMAVEGAT*MCQSSI
Trigger: GATAGAAGACTGGCACATCCAAGTTGCTCCTTCCAC...GGCCATCTGCATCAGCCCGACCCCCACAGGATAGAAGACTGGCACATCCAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTACTATTCCCAGTGTCTaGAGCCCTTCGGACTCGCCC +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLTIPSV*SPSDSP
Trigger: GGGCGAGTCCGAAGGGCTCCAGACACTGGGAATAGT...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636734.1
CDS-3UTR TCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGAGTACCAATCATGAATaGACAGAGCCCGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALSTNHE*TEPGPR
Trigger: GCGCGGTCCGGGCTCTGTTCATTCATGATTGGTACT...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR TCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAGCCGAGTACCAATCATaGATGAACAGAGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRAEYQS*MNRART
Trigger: GGTCCGGGCTCTGTTCATTCATGATTGGTACTCGGC...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR TCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGGTGGTTTGTCTACTCTaGATTGGAGGAGAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWVVCLL*IGGEKS
Trigger: GCTTTTCTCTCCTCCAATTCAGAGTAGACAAACCAC...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGATGAGAAGGTGCCCATaGCGGCCCCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRMRRCP*RPPWQR
Trigger: TCGCTGCCATGGGGGCCGTCATGGGCACCTTCTCAT...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAATGTTGTCGTCCTCCTaGCATGATTCAAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGMLSSS*HDSRNS
Trigger: TGAATTTCTTGAATCATGTCAGGAGGACGACAACAT...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGATGTTGTCGTCCTCCTaGCATGATTCAAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: SGLLGRDMQRWAQAGDVVMLSSS*HDSRNS
Trigger: TGAATTTCTTGAATCATGTCAGGAGGACGACAACAT...CACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGCTGGAGAGACCTCATaGTGTTGTCGTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALAGETS*CCRPPD
Trigger: GTCAGGAGGACGACAACATCATGAGGTCTCTCCAGC...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTCTCCCAATCTGGTCATaGCAGATCCTAATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWALPIWS*QILIVL
Trigger: CAGAACAATTAGGATCTGTCATGACCAGATTGGGAG...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGCTCCCAATCTGGTCATaGCAGATCCTAATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWLPIWS*QILIVL
Trigger: CAGAACAATTAGGATCTGTCATGACCAGATTGGGAG...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CTCTATGATTTTCAGGCCTGGATGAGAGGCAGGGCGAGTGAGCTCCATGGAAATCAGCGGGATGCTCTATaGTTTTCAGGCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: LYDFQAWMRGRASELHGNQRDAL*FSGLDE
Trigger: CTCATCCAGGCCTGAAAATCATAGAGCATCCCGCTG...ATTTCCATGGAGCTCACTCGCCCTGCCTCTCATCCAGGCCTGAAAATCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGCAGGGCCGAGGACGGTaGCCTGAAGCCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMQGRGR*PEACLA
Trigger: TGCCAGGCAGGCTTCAGGGCACCGTCCTCGGCCCTG...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR GCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCACAGCGAAGACTTGAGTaGGAGTTGGGACCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRAQRRLE*ELGPRA
Trigger: GGCCCGGGGTCCCAACTCGCACTCAAGTCTTCGCTG...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAACAGCGAAGACTTGAGTaGGAGTTGGGACCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQQRRLE*ELGPRA
Trigger: GGCCCGGGGTCCCAACTCGCACTCAAGTCTTCGCTG...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGGTCTGGGCCTCGAGCTaGTCCAGTCCCTCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMVWASS*SSPSGR
Trigger: TCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGAC...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTTCTTGGGAGGGACATaGAGCGCTGGGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRFLGGT*SAGLKQ
Trigger: CTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAA...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGGGGCCGGGACAGCACTaGCGGGGCACAAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMGPGQH*RGTRYS
Trigger: GGAGTACCTTGTGCCCCGGCAGTGCTGTCCCGGCCC...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR GCA 90 bp ATTCAAATGCTCTGTCCCTCCAGTCTTGATGATGCTGAGTCTTCAATTGGCCACCAGCACAGCTGCCTCTaGAGCGAGTCTGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IQMLCPSSLDDAESSIGHQHSCL*SESGFC
Trigger: GCAGAAGCCAGACTCGCTGCAGAGGCAGCTGTGCTG...GTGGCCAATTGAAGACTCAGCATCATCAAGACTGGAGGGACAGAGCATTTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp CGTCTGATGATTCAAATGCTCTGTCCCTCCAGTCTTGATGATGCTGAGTCTTCAACCCTGAGTGACGGATaGACCCCTGAAGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RLMIQMLCPSSLDDAESSTLSDG*TPEARL
Trigger: GAGCCTGGCTTCAGGGGTGCATCCGTCACTCAGGGT...TGAAGACTCAGCATCATCAAGACTGGAGGGACAGAGCATTTGAATCATCAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR GCA 90 bp CTCTATGATTTTCAGGCCTGGATGAGAGGCAGGGCGAGTGAGCTCCATGGAAATTCACGAACCCAAGCTTaGATCTTTTGGAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LYDFQAWMRGRASELHGNSRTQA*IFWSSR
Trigger: GCGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGA...ATTTCCATGGAGCTCACTCGCCCTGCCTCTCATCCAGGCCTGAAAATCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCCCTGCGCTCGGGCTaGGTCTCGGAGGGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMSLRSG*VSEGRV
Trigger: TACTCGGCCCTCCGAGACCCAGCCCGAGCGCAGGGA...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS-3UTR CCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCAGTCCCTCGGGCCGATaGCAAACCATGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRSPSGR*QTMVIS
Trigger: GGAGATGACCATGGTTTGCCATCGGCCCGAGGGACT...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTTGGAGGCAGTGGGCTaGGGGCACGTAAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRLEAVG*GHVSSI
Trigger: TATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAA...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACATGGAAACAAATGACATaGGCAGTTTGGGTCATCAGA +
Preference number: 4 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTWKQMT*AVWVIR
Trigger: TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCA...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTGGAGATATGGACCACTaGGCAATGGCTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLGDMDH*AMAPFL
Trigger: CAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCC...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAGGAGATATGGACCACTaGGCAATGGCTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRGDMDH*AMAPFL
Trigger: CAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCC...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAGCATTCTGGACTTCTTaGGAGGGACATGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRAFWTS*EGHAAL
Trigger: CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGC...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTGGAGCAGCCGCTCATaGTGGCGGAGGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMWSSRS*WRRGAR
Trigger: CCTGGCTCCCCTCCGCCACCATGAGCGGCTGCTCCA...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR TCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGATGAGAAGGTGCCCATaGCGGCCCCCATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQMRRCP*RPPWQR
Trigger: TCGCTGCCATGGGGGCCGTCATGGGCACCTTCTCAT...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTTTGGAGTGTCCTCTTTaGGCACAGGATATGTGTATT +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWALECPL*AQDMCI
Trigger: AATACACATATCCTGTGCTCAAAGAGGACACTCCAA...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAGTTACATGACATTTTaGAACAGCTGGAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLSYMTF*NSWRDL
Trigger: GAGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCCATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRHRAAV*GDEHAS
Trigger: GGAAGCATGCTCATCTCCTCACACTGCTGCCCTATG...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCTTCAATCTTATCGTCTaGCAAGTCAATCAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLFNLIV*QVNQSE
Trigger: CTCGGACTGATTGACTTGTCAGACGATAAGATTGAA...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636734.1
CDS-3UTR GCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGATTCTTGGGAGGGACATaGAGCGCTGGGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGFLGGT*SAGLKQ
Trigger: CTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAA...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGCAGCACAGCTGCCTCTaGAGCGAGTCTGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLQHSCL*SESGFC
Trigger: GCAGAAGCCAGACTCGCTGCAGAGGCAGCTGTGCTG...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGACCCAGAAGGGACAGTaGCCACCTTGTGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLTQKGQ*PPCAPQ
Trigger: CTGGGGTGCACAAGGTGGGCACTGTCCCTTCTGGGT...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR GCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCATTCGGACTCGCCCTCTaGCCACATCCTCACAGCACC +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRAFGLAL*PHPHST
Trigger: GGTGCTGTGAGGATGTGGGCAGAGGGCGAGTCCGAA...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636734.1
CDS-3UTR CCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGAAGTCCCTCGGGCCGATaGCAAACCATGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGSPSGR*QTMVIS
Trigger: GGAGATGACCATGGTTTGCCATCGGCCCGAGGGACT...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAACACCTTAGTTTCTCGTaGACAGTTCCTCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQHLSFS*TVPLNK
Trigger: TTTATTGAGAGGAACTGTCCACGAGAAACTAAGGTG...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AACTTGGATGTGCCAGTCTTCTATCCTGTGGGGGTCGGGCTGATGCAGATGGCCAGCTTAAAGATGGTCTaGGCAAATTTCACGAACCCA +
Preference number: 4 (lower is better)
Translates to: NLDVPVFYPVGVGLMQMASLKMV*ANFTNP
Trigger: TGGGTTCGTGAAATTTGCCCAGACCATCTTTAAGCT...GGCCATCTGCATCAGCCCGACCCCCACAGGATAGAAGACTGGCACATCCAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517344.1
3UTR CAA 72 bp ATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTaGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: IKLQQFAGILDF*GGTCSAGLKQG
Trigger: CCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATGCTGGAGAGACCTCATaGTGTTGTCGTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNAGETS*CCRPPD
Trigger: GTCAGGAGGACGACAACATCATGAGGTCTCTCCAGC...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRNVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGTATAACCTTCTGCTaGTCCAGCGGTATCCACACA +
Preference number: 4 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALGITFC*SSGIHT
Trigger: TGTGTGGATACCGCTGGATCAGCAGAAGGTTATACC...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTGGGTGAATGAACCCTaGGTGACGGATGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLWVNEP*VTDAPL
Trigger: CAGGGGTGCATCCGTCACTCAGGGTTCATTCACCCA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR GCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGGCCCGGCAGCTCGCCTaGAGCTTGGTATTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQARQLA*SLVFSK
Trigger: CTTGCTGAATACCAAGCTGCAGGCGAGCTGCCGGGC...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGAAGACGTCCACATaGTGCCTTGGAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLKKTST*CLGVSS
Trigger: AGAGGACACTCCAAGGCAGCATGTGGACGTCTTCTT...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGACCCACATATGTTAGGTaGTGGCTCTCCCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRPTYVR*WLSQSG
Trigger: ACCAGATTGGGAGAGCCAGCACCTAACATATGTGGG...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATACACTCCATCCCCTGCTaGTGGAAGCCTGCTACTTCC +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIHSIPC*WKPATS
Trigger: GGAAGTAGCAGGCTTCCAGCAGCAGGGGATGGAGTG...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTGCATCCAGAGAGCCTaGAGGGCAAACTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLCIQRA*RANSPS
Trigger: GGAGGGAGAGTTTGCCCTGCAGGCTCTCTGGATGCA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR GCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGCGGGAACAGCACAGCTaGCTCTGCAGCGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMREQHS*LCSESG
Trigger: GCCAGACTCGCTGCAGAGGCAGCTGTGCTGTTCCCG...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR GCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGAGGGGAGCCAGGCTCTaGTGTCAGCACCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMRGARL*CQHPEG
Trigger: CCCTTCTGGGTGCTGACAGCAGAGCCTGGCTCCCCT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR CCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGAGTCCCTCGGGCCGATaGCAAACCATGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLSPSGR*QTMVIS
Trigger: GGAGATGACCATGGTTTGCCATCGGCCCGAGGGACT...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAAGTCCCTCGGGCCGATaGCAAACCATGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTISPSGR*QTMVIS
Trigger: GGAGATGACCATGGTTTGCCATCGGCCCGAGGGACT...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTTTTTTGTCCATTTTCTaGAAGAAGACGTCCACATGC +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWAFLSIF*KKTSTC
Trigger: GCATGTGGACGTCTTCTTCCAGAAAATGGACAAAAA...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCTTTTTGTCCATTTTCTaGAAGAAGACGTCCACATGC +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLFLSIF*KKTSTC
Trigger: GCATGTGGACGTCTTCTTCCAGAAAATGGACAAAAA...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGTTGGAGGCAGTGGGCTaGGGGCACGTAAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRLEAVG*GHVSSI
Trigger: TATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAA...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCATTGGAGGCAGTGGGCTaGGGGCACGTAAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRALEAVG*GHVSSI
Trigger: TATGCTGCTTACGTGCCCCCAGCCCACTGCCTCCAA...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTATGACATGGGCAGTTTaGGTCATCAGACAATATCAT +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWAMTWAV*VIRQYH
Trigger: ATGATATTGTCTGATGACCCAAACTGCCCATGTCAT...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCATGACATGGGCAGTTTaGGTCATCAGACAATATCAT +
Preference number: 4 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLMTWAV*VIRQYH
Trigger: ATGATATTGTCTGATGACCCAAACTGCCCATGTCAT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGCAGGGAGGGAGGAGCTaGAGCTCTCCCAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMQGGRS*SSPRLC
Trigger: GCAAAGCCTGGGAGAGCTCCAGCTCCTCCCTCCCTG...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR TCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGATGGCAGCGAAGACTTaGGTGCGAGTTGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMMAAKT*VRVGTP
Trigger: CGGGGTCCCAACTCGCACTCAAGTCTTCGCTGCCAT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACG +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRWCRRH*RGNGHT
Trigger: CGTATGCCCATTACCTCTTCAATGCCTTCGACACCA...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCATTCACGGAGCCTGTCTaGGTGGTGTCGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRAFTEPV*VVSKAL
Trigger: CAATGCCTTCGACACCACTCAGACAGGCTCCGTGAA...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGTTCACGGAGCCTGTCTaGGTGGTGTCGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRFTEPV*VVSKAL
Trigger: CAATGCCTTCGACACCACTCAGACAGGCTCCGTGAA...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGGCTGGAGAGACCTCATaGTGTTGTCGTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLAGETS*CCRPPD
Trigger: GTCAGGAGGACGACAACATCATGAGGTCTCTCCAGC...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAACATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQHRAAV*GDEHAS
Trigger: GGAAGCATGCTCATCTCCTCACACTGCTGCCCTATG...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGGCCTGCCTGGGTGAATaGACCCTGAGTGACGGATGC +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMACLGE*TLSDGC
Trigger: GCATCCGTCACTCAGGGTTCATTCACCCAGGCAGGC...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR GCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATGGTAATGGGCATACGTaGTGGCATCTCCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNGNGHT*WHLHEG
Trigger: TCCCTCATGGAGATGCCAGCACGTATGCCCATTACC...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328939.9
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGAGGTAATGGGCATACGTaGTGGCATCTCCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGGNGHT*WHLHEG
Trigger: TCCCTCATGGAGATGCCAGCACGTATGCCCATTACC...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328939.9
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCAAGACGTCCACATGCTaGCTTGGAGTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRKTSTC*LGVSSL
Trigger: CAAAGAGGACACTCCAAGGCAGCATGTGGACGTCTT...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGATTCTTGGGAGGGACATaGAGCGCTGGGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRFLGGT*SAGLKQ
Trigger: CTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAA...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGACCCTGAGTGACGGATaGACCCCTGAAGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMTLSDG*TPEARL
Trigger: GAGCCTGGCTTCAGGGGTGCATCCGTCACTCAGGGT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR CCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAAGCTCGCCTGCAGCTTaGTATTCAGCAAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQSSPAA*YSASVE
Trigger: CTCCACGCTTGCTGAATACCAAGCTGCAGGCGAGCT...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTTGGTGAAGTTGGTCTaGGCCTCGAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLLVKLV*ASSCSS
Trigger: ACTGGAGCAGCTCGAGGCCCAGACCAACTTCACCAA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATTGGTGAAGTTGGTCTaGGCCTCGAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQLVKLV*ASSCSS
Trigger: ACTGGAGCAGCTCGAGGCCCAGACCAACTTCACCAA...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCTCTGAGAGCTGAATaGCTGAGTGTCACCAGTTAC +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRSLRAE*LSVTSY
Trigger: GTAACTGGTGACACTCAGCCATTCAGCTCTCAGAGA...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCT +
Preference number: 4 (lower is better)
Translates to: GPLASRFTKVCLTWRQWAIRVLR*LFSTMS
Trigger: AGACATTGTACTAAACAACCACCTTAACACCCTGAT...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGAGAGATGGTGTGCATCTaGCTCAGGTCCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGEMVCI*LRSSCF
Trigger: GAAGCAAGAGGACCTGAGCCAGATGCACACCATCTC...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAGGAGGCCATCAGAGATaGTGTGCATCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIGGHQR*CASGSG
Trigger: ACCTGAGCCAGATGCACACCATCTCTGATGGCCTCC...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGGAGATATGGACCACTaGGCAATGGCTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRGDMDH*AMAPFL
Trigger: CAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCC...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGAGGGACATGCAGCGCTaGGCTCAAGCAGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMRDMQR*AQAGDV
Trigger: CACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAGCATTCTGGACTTCTTaGGAGGGACATGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQAFWTS*EGHAAL
Trigger: CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGC...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGAGCTGGAGAGACCTCATaGTGTTGTCGTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRAGETS*CCRPPD
Trigger: GTCAGGAGGACGACAACATCATGAGGTCTCTCCAGC...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAAGCAGTGTGAGGAGATaGGCATGCTTCCAAAACAAA +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRSSVRR*ACFQNK
Trigger: TTTGTTTTGGAAGCATGCTCATCTCCTCACACTGCT...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQHRAAV*GDEHAS
Trigger: GGAAGCATGCTCATCTCCTCACACTGCTGCCCTATG...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTGTTTCTGGAAACAAATaGCATGGGCAGTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLVSGNK*HGQFGS
Trigger: TGACCCAAACTGCCCATGTCATTTGTTTCCAGAAAC...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAGGTAATGGGCATACGTaGTGGCATCTCCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRAGNGHT*WHLHEG
Trigger: TCCCTCATGGAGATGCCAGCACGTATGCCCATTACC...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328939.9
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGAAAGACGTCCACATGCTaGCTTGGAGTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGKTSTC*LGVSSL
Trigger: CAAAGAGGACACTCCAAGGCAGCATGTGGACGTCTT...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATAAGAAGACGTCCACATaGTGCCTTGGAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNKKTST*CLGVSS
Trigger: AGAGGACACTCCAAGGCAGCATGTGGACGTCTTCTT...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGAGATTCACCAAGGTCTaGCTGACTTGGAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRRFTKV*LTWRQW
Trigger: CCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCT...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAAGATTCACCAAGGTCTaGCTGACTTGGAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRARFTKV*LTWRQW
Trigger: CCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCT...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAAGATTCACCAAGGTCTaGCTGACTTGGAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIRFTKV*LTWRQW
Trigger: CCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCT...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATCCCACATATGTTAGGTaGTGGCTCTCCCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNPTYVR*WLSQSG
Trigger: ACCAGATTGGGAGAGCCAGCACCTAACATATGTGGG...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGCTGCTGCTGGAAGCCTaGTACTTCCATCAACCATCC +
Preference number: 4 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRLLLEA*YFHQPS
Trigger: GGATGGTTGATGGAAGTAGCAGGCTTCCAGCAGCAG...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGAACTCACTCCATCCCCTaGTGCTGGAAGCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRTHSIP*CWKPAT
Trigger: AGTAGCAGGCTTCCAGCAGCAGGGGATGGAGTGAGT...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGCTCTCCACCCACTCCTaGTGTCCACTTAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLLSTHS*CPLKSS
Trigger: TGAGGACTTAAGTGGACAGCAGGAGTGGGTGGAGAG...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTCACGAACCCAAGCTTaGATCTTTTGGAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLSRTQA*IFWSSR
Trigger: GCGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR CCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGAGCCGATGGCAAACCATaGTCATCTCCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGADGKP*SSPAHL
Trigger: AAGATGAGCTGGAGATGACCATGGTTTGCCATCGGC...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGTTGGTGAAGTTGGTCTaGGCCTCGAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQLVKLV*ASSCSS
Trigger: ACTGGAGCAGCTCGAGGCCCAGACCAACTTCACCAA...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTAGAAAGAGGAAGAGTTaGCAATCAGAGACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLRKRKS*QSETEP
Trigger: TGGCTCAGTCTCTGATTGCCAACTCTTCCTCTTTCT...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAGAGATGGTGTGCATCTaGCTCAGGTCCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIEMVCI*LRSSCF
Trigger: GAAGCAAGAGGACCTGAGCCAGATGCACACCATCTC...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAGAGATGGTGTGCATCTaGCTCAGGTCCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQEMVCI*LRSSCF
Trigger: GAAGCAAGAGGACCTGAGCCAGATGCACACCATCTC...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGGGAGGCCATCAGAGATaGTGTGCATCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQGGHQR*CASGSG
Trigger: ACCTGAGCCAGATGCACACCATCTCTGATGGCCTCC...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTGGACCACTGGGCAATaGCTCCCTTCCTGGACATAT +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLWTTGQ*LPSWTY
Trigger: ATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAGATGTGGTGGAGATATaGACCACTGGGCAATGGCTC +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRADVVEI*TTGQWL
Trigger: GAGCCATTGCCCAGTGGTCCATATCTCCACCACATC...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGGCATTCTGGACTTCTTaGGAGGGACATGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQAFWTS*EGHAAL
Trigger: CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGC...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTAATTTGCAGGCATTCTaGACTTCTTGGGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLNLQAF*TSWEGH
Trigger: ATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATT...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGCCTCTGCAGCGAGTCTaGCTTCTGCATCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMPLQRV*LLHPES
Trigger: GCTCTCTGGATGCAGAAGCCAGACTCGCTGCAGAGG...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR TCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACG +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLWCRRH*RGNGHT
Trigger: CGTATGCCCATTACCTCTTCAATGCCTTCGACACCA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCATGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACG +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRAWCRRH*RGNGHT
Trigger: CGTATGCCCATTACCTCTTCAATGCCTTCGACACCA...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTTCACGGAGCCTGTCTaGGTGGTGTCGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMFTEPV*VVSKAL
Trigger: CAATGCCTTCGACACCACTCAGACAGGCTCCGTGAA...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGAGTTACATGACATTTTaGAACAGCTGGAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALSYMTF*NSWRDL
Trigger: GAGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACT...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGAAGTTACATGACATTTTaGAACAGCTGGAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRSYMTF*NSWRDL
Trigger: GAGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACT...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTINVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGCATAGGGCAGCAGTGTaGGGAGATGAGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMHRAAV*GDEHAS
Trigger: GGAAGCATGCTCATCTCCTCACACTGCTGCCCTATG...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCCTCCCAATCTGGTCATaGCAGATCCTAATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRLPIWS*QILIVL
Trigger: CAGAACAATTAGGATCTGTCATGACCAGATTGGGAG...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCGTTTCTGGAAACAAATaGCATGGGCAGTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRVSGNK*HGQFGS
Trigger: TGACCCAAACTGCCCATGTCATTTGTTTCCAGAAAC...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGAGCACAAATGCCAGTGTaGGAGAATTATTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGAQMPV*ENYWSS
Trigger: CGAGGACCAATAATTCTCTCACACTGGCATTTGTGC...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGGGTAATGGGCATACGTaGTGGCATCTCCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQGNGHT*WHLHEG
Trigger: TCCCTCATGGAGATGCCAGCACGTATGCCCATTACC...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328939.9
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGAAGACGTCCACATGCTaGCTTGGAGTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLKTSTC*LGVSSL
Trigger: CAAAGAGGACACTCCAAGGCAGCATGTGGACGTCTT...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGAAGAAGACGTCCACATaGTGCCTTGGAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLKKTST*CLGVSS
Trigger: AGAGGACACTCCAAGGCAGCATGTGGACGTCTTCTT...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGAGATTCACCAAGGTCTaGCTGACTTGGAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQRFTKV*LTWRQW
Trigger: CCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCT...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTCCTGCTGTTCTAAAGTaGACGGTTTATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLPAVLK*TVYFPP
Trigger: TGGTGGAAAATAAACCGTGCACTTTAGAACAGCAGG...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636734.1
CDS-3UTR CCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATAGGGTCGCCTTTGTTTaGTTTGCAGAGATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNRVAFV*FAEMRR
Trigger: CCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCT...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGGCCGATGGCAAACCATaGTCATCTCCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLADGKP*SSPAHL
Trigger: AAGATGAGCTGGAGATGACCATGGTTTGCCATCGGC...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTCTCTGAGAGCTGAATaGCTGAGTGTCACCAGTTAC +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNSLRAE*LSVTSY
Trigger: GTAACTGGTGACACTCAGCCATTCAGCTCTCAGAGA...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCAGAAAGAGGAAGAGTTaGCAATCAGAGACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRRKRKS*QSETEP
Trigger: TGGCTCAGTCTCTGATTGCCAACTCTTCCTCTTTCT...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATGGAAACAAATGACATaGGCAGTTTGGGTCATCAGA +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRWKQMT*AVWVIR
Trigger: TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCA...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGTGGACCACTGGGCAATaGCTCCCTTCCTGGACATAT +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQWTTGQ*LPSWTY
Trigger: ATATGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCA...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGAGATGTGGTGGAGATATaGACCACTGGGCAATGGCTC +
Preference number: 4 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRDVVEI*TTGQWL
Trigger: GAGCCATTGCCCAGTGGTCCATATCTCCACCACATC...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATGTGGTTTGTCTACTCTaGATTGGAGGAGAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNVVCLL*IGGEKS
Trigger: GCTTTTCTCTCCTCCAATTCAGAGTAGACAAACCAC...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTGGGGCACTCATTTTTaGAGCCTCGATAAAGGACCT +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLWGTHF*SLDKGP
Trigger: AGGTCCTTTATCGAGGCTTCAAAAATGAGTGCCCCA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTTGGAGTGTCCTCTTTaGGCACAGGATATGTGTATT +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRLECPL*AQDMCI
Trigger: AATACACATATCCTGTGCTCAAAGAGGACACTCCAA...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATCTCCCAATCTGGTCATaGCAGATCCTAATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNLPIWS*QILIVL
Trigger: CAGAACAATTAGGATCTGTCATGACCAGATTGGGAG...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGGGTATAACCTTCTGCTaGTCCAGCGGTATCCACACA +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQGITFC*SSGIHT
Trigger: TGTGTGGATACCGCTGGATCAGCAGAAGGTTATACC...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS-3UTR GCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGGGTAATGGGCATACGTaGTGGCATCTCCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMGNGHT*WHLHEG
Trigger: TCCCTCATGGAGATGCCAGCACGTATGCCCATTACC...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTCACCTTAGTTTCTCGTaGACAGTTCCTCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLHLSFS*TVPLNK
Trigger: TTTATTGAGAGGAACTGTCCACGAGAAACTAAGGTG...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTTTTTTGTCCATTTTCTaGAAGAAGACGTCCACATGC +
Preference number: 4 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLFLSIF*KKTSTC
Trigger: GCATGTGGACGTCTTCTTCCAGAAAATGGACAAAAA...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp CAGTCCTATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATTTTTGTCCATTTTCTaGAAGAAGACGTCCACATGC +
Preference number: 4 (lower is better)
Translates to: QSYPTYVRCWLSQSGHDRFLSIF*KKTSTC
Trigger: GCATGTGGACGTCTTCTTCCAGAAAATGGACAAAAA...TCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGATAGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGGAGATGGTGTGCATCTaGCTCAGGTCCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMEMVCI*LRSSCF
Trigger: GAAGCAAGAGGACCTGAGCCAGATGCACACCATCTC...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGAAATTTGCAGGCATTCTaGACTTCTTGGGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGNLQAF*TSWEGH
Trigger: ATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATT...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGCAAGCTTGCATCTTTTaGAGCAGCCGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMQACIF*SSRSWW
Trigger: CCACCATGAGCGGCTGCTCCAAAAGATGCAAGCTTG...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR TCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAGTGGTTTGTCTACTCTaGATTGGAGGAGAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQVVCLL*IGGEKS
Trigger: GCTTTTCTCTCCTCCAATTCAGAGTAGACAAACCAC...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR TCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGTGGGGCACTCATTTTTaGAGCCTCGATAAAGGACCT +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQWGTHF*SLDKGP
Trigger: AGGTCCTTTATCGAGGCTTCAAAAATGAGTGCCCCA...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATAGTTACATGACATTTTaGAACAGCTGGAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNSYMTF*NSWRDL
Trigger: GAGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACT...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGAATGTCTCTGAGAGCTaGATGGCTGAGTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMNVSES*MAECHQ
Trigger: CTGGTGACACTCAGCCATTCAGCTCTCAGAGACATT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAAGCAGTGTGAGGAGATaGGCATGCTTCCAAAACAAA +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQSSVRR*ACFQNK
Trigger: TTTGTTTTGGAAGCATGCTCATCTCCTCACACTGCT...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCACTCCCAATCTGGTCATaGCAGATCCTAATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRALPIWS*QILIVL
Trigger: CAGAACAATTAGGATCTGTCATGACCAGATTGGGAG...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAGTTTCTGGAAACAAATaGCATGGGCAGTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIVSGNK*HGQFGS
Trigger: TGACCCAAACTGCCCATGTCATTTGTTTCCAGAAAC...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGGCACAAATGCCAGTGTaGGAGAATTATTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQAQMPV*ENYWSS
Trigger: CGAGGACCAATAATTCTCTCACACTGGCATTTGTGC...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGAGCACAAATGCCAGTGTaGGAGAATTATTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRAQMPV*ENYWSS
Trigger: CGAGGACCAATAATTCTCTCACACTGGCATTTGTGC...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGAAGAAGACGTCCACATaGTGCCTTGGAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMKKTST*CLGVSS
Trigger: AGAGGACACTCCAAGGCAGCATGTGGACGTCTTCTT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGTACTACCAGCACAAATaGCAGTGTGAGAGAATTATT +
Preference number: 4 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALYYQHK*QCERII
Trigger: AATAATTCTCTCACACTGGCATTTGTGCTGGTAGTA...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGTTGTCTACTCTGAATTaGAGGAGAGAAAAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQLSTLN*RREKRP
Trigger: CGGGCGCTTTTCTCTCCTCCAATTCAGAGTAGACAA...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGAATGGGCATACGTGCTaGCATCTCCATGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: YKITAICRHSGLLGRDMQNGHTC*HLHEGK
Trigger: TTTTCCCTCATGGAGATGCCAGCACGTATGCCCATT...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328939.9
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCCACCTTAGTTTCTCGTaGACAGTTCCTCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: KITAICRHSGLLGRDMQRHLSFS*TVPLNK
Trigger: TTTATTGAGAGGAACTGTCCACGAGAAACTAAGGTG...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCT +
Preference number: 4 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALIRVLR*LFSTMS
Trigger: AGACATTGTACTAAACAACCACCTTAACACCCTGAT...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGTTCTGTCCCAAGAGTTaGTGTGTAAAATCAGAACAA +
Preference number: 4 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALFCPKS*CVKSEQ
Trigger: TTGTTCTGATTTTACACACCAACTCTTGGGACAGAA...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGATGGAAACAAATGACATaGGCAGTTTGGGTCATCAGA +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGWKQMT*AVWVIR
Trigger: TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCA...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATATTGGTCCTCGTTTCTaGAAACAAATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNIGPRF*KQMTWA
Trigger: TGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGAATTGGTCCTCGTTTCTaGAAACAAATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGIGPRF*KQMTWA
Trigger: TGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAAATGGGCATACGTGCTaGCATCTACAAGGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRANGHTC*HLQGRK
Trigger: TTTTCTGCCTTGTAGATGCCAGCACGTATGCCCATT...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390656.8
CDS-3UTR TCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTTGGAGTGTCCTCTTTaGGCACAGGATATGTGTATT +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLLECPL*AQDMCI
Trigger: AATACACATATCCTGTGCTCAAAGAGGACACTCCAA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATATGTTGTCGTCCTCCTaGCATGATTCAAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNMLSSS*HDSRNS
Trigger: TGAATTTCTTGAATCATGTCAGGAGGACGACAACAT...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGAGTTACATGACATTTTaGAACAGCTGGAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLSYMTF*NSWRDL
Trigger: GAGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACT...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAAGTTACATGACATTTTaGAACAGCTGGAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRASYMTF*NSWRDL
Trigger: GAGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACT...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGAAGCAGTGTGAGGAGATaGGCATGCTTCCAAAACAAA +
Preference number: 4 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRSSVRR*ACFQNK
Trigger: TTTGTTTTGGAAGCATGCTCATCTCCTCACACTGCT...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAGGAAAGAAATCCCCGTaGTTTGTCTACTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIGKKSP*FVYSEL
Trigger: CAATTCAGAGTAGACAAACCACGGGGATTTCTTTCC...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGAATGGGCATACGTGCTaGCATCTCCATGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMNGHTC*HLHEGK
Trigger: TTTTCCCTCATGGAGATGCCAGCACGTATGCCCATT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGAGAGCTGAATaGCTGAGTGTCACCAGTTAC +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMSLRAE*LSVTSY
Trigger: GTAACTGGTGACACTCAGCCATTCAGCTCTCAGAGA...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATATGACATGGGCAGTTTaGGTCATCAGACAATATCAT +
Preference number: 4 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNMTWAV*VIRQYH
Trigger: ATGATATTGTCTGATGACCCAAACTGCCCATGTCAT...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAATTGGTCCTCGTTTCTaGAAACAAATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIIGPRF*KQMTWA
Trigger: TGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGATGTTGTCGTCCTCCTaGCATGATTCAAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLMLSSS*HDSRNS
Trigger: TGAATTTCTTGAATCATGTCAGGAGGACGACAACAT...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGAGTGTCACCAGTTACATaGCATTTTGAAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRVSPVT*HFETAG
Trigger: TCCAGCTGTTTCAAAATGTCATGTAACTGGTGACAC...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGGTTTCTGGAAACAAATaGCATGGGCAGTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMVSGNK*HGQFGS
Trigger: TGACCCAAACTGCCCATGTCATTTGTTTCCAGAAAC...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGATACTACCAGCACAAATaGCAGTGTGAGAGAATTATT +
Preference number: 4 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGYYQHK*QCERII
Trigger: AATAATTCTCTCACACTGGCATTTGTGCTGGTAGTA...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGCACCTTAGTTTCTCGTaGACAGTTCCTCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLHLSFS*TVPLNK
Trigger: TTTATTGAGAGGAACTGTCCACGAGAAACTAAGGTG...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATACACCTTAGTTTCTCGTaGACAGTTCCTCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIHLSFS*TVPLNK
Trigger: TTTATTGAGAGGAACTGTCCACGAGAAACTAAGGTG...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTTTTTGTCCATTTTCTaGAAGAAGACGTCCACATGC +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLFLSIF*KKTSTC
Trigger: GCATGTGGACGTCTTCTTCCAGAAAATGGACAAAAA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGTTTTTGTCCATTTTCTaGAAGAAGACGTCCACATGC +
Preference number: 4 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRFLSIF*KKTSTC
Trigger: GCATGTGGACGTCTTCTTCCAGAAAATGGACAAAAA...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGAGAAAGAGGAAGAGTTaGCAATCAGAGACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMRKRKS*QSETEP
Trigger: TGGCTCAGTCTCTGATTGCCAACTCTTCCTCTTTCT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAATGACATGGGCAGTTTaGGTCATCAGACAATATCAT +
Preference number: 4 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQMTWAV*VIRQYH
Trigger: ATGATATTGTCTGATGACCCAAACTGCCCATGTCAT...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGTGGAAACAAATGACATaGGCAGTTTGGGTCATCAGA +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQWKQMT*AVWVIR
Trigger: TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCA...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGATTGGTCCTCGTTTCTaGAAACAAATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQIGPRF*KQMTWA
Trigger: TGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR TCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGGTGTCACCAGTTACATaGCATTTTGAAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMVSPVT*HFETAG
Trigger: TCCAGCTGTTTCAAAATGTCATGTAACTGGTGACAC...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGTACTACCAGCACAAATaGCAGTGTGAGAGAATTATT +
Preference number: 4 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRYYQHK*QCERII
Trigger: AATAATTCTCTCACACTGGCATTTGTGCTGGTAGTA...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR GCA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATATACTACCAGCACAAATaGCAGTGTGAGAGAATTATT +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIYYQHK*QCERII
Trigger: AATAATTCTCTCACACTGGCATTTGTGCTGGTAGTA...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGCACCTTAGTTTCTCGTaGACAGTTCCTCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQHLSFS*TVPLNK
Trigger: TTTATTGAGAGGAACTGTCCACGAGAAACTAAGGTG...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTTCTGTCCCAAGAGTTaGTGTGTAAAATCAGAACAA +
Preference number: 4 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLFCPKS*CVKSEQ
Trigger: TTGTTCTGATTTTACACACCAACTCTTGGGACAGAA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGAGCTTAAAGATGGTCTaGGCAAATTTCACGAACCCA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMSLKMV*ANFTNP
Trigger: TGGGTTCGTGAAATTTGCCCAGACCATCTTTAAGCT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR TCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGATGTTGTCGTCCTCCTaGCATGATTCAAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMMLSSS*HDSRNS
Trigger: TGAATTTCTTGAATCATGTCAGGAGGACGACAACAT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCT +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQIRVLR*LFSTMS
Trigger: AGACATTGTACTAAACAACCACCTTAACACCCTGAT...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGAATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCT +
Preference number: 4 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRIRVLR*LFSTMS
Trigger: AGACATTGTACTAAACAACCACCTTAACACCCTGAT...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGTTCTGTCCCAAGAGTTaGTGTGTAAAATCAGAACAA +
Preference number: 4 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQFCPKS*CVKSEQ
Trigger: TTGTTCTGATTTTACACACCAACTCTTGGGACAGAA...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
3UTR CAA 72 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTaGGGTCATCAGACAATATCATGCTTAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: WSSFLETNDMGS*GHQTISCLIIQ
Trigger: CTGAATTATTAAGCATGATATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CCA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGATCAGGGTGTTAAGGTaGTTGTTTAGTACAATGTCT +
Preference number: 4 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMIRVLR*LFSTMS
Trigger: AGACATTGTACTAAACAACCACCTTAACACCCTGAT...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS GCA 90 bp CCCGGCGGTTCCCTCGCCCAGGGCCGAGGACGGTGCCCTGAAGCCTaGCTGGCACTGGACACGGGGCCAGAGCGGCCGCCCGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: PGGSLAQGRGRCPEA*LALDTGPERPPGRG
Trigger: GCCTCGGCCGGGCGGCCGCTCTGGCCCCGTGTCCAGTGCCAGGCAGGCTTCAGGGCACCGTCCTCGGCCCTGGGCGAGGGAACCGCCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS GCA 90 bp GCGAGGACCCGGCCCGGCGGTTCCCTCGCCCAGGGCCGAGGACGGTaGCCTGAAGCCTGCCTGGCACTGGACACGGGGCCAGAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: ARTRPGGSLAQGRGR*PEACLALDTGPERP
Trigger: CGGCCGCTCTGGCCCCGTGTCCAGTGCCAGGCAGGCTTCAGGGCACCGTCCTCGGCCCTGGGCGAGGGAACCGCCGGGCCGGGTCCTCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS CCA 90 bp GCGGTTCCCTCGCCCAGGGCCGAGGACGGTGCCCTGAAGCCTGCCTaGCACTGGACACGGGGCCAGAGCGGCCGCCCGGCCGAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: AVPSPRAEDGALKPA*HWTRGQSGRPAEAA
Trigger: GGCAGCCTCGGCCGGGCGGCCGCTCTGGCCCCGTGTCCAGTGCCAGGCAGGCTTCAGGGCACCGTCCTCGGCCCTGGGCGAGGGAACCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS TCA 90 bp CCTGCGCTCGGGCTGGGTCTCGGAGGGCCGAGTACCAATCATGAATaGACAGAGCCCGGACCGCGCGGCGCGGAGCCACAGCGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: PALGLGLGGPSTNHE*TEPGPRGAEPQRAR
Trigger: GCGGGCGCGCTGTGGCTCCGCGCCGCGCGGTCCGGGCTCTGTTCATTCATGATTGGTACTCGGCCCTCCGAGACCCAGCCCGAGCGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS TCA 90 bp CCTCCCTGCGCTCGGGCTGGGTCTCGGAGGGCCGAGTACCAATCATaGATGAACAGAGCCCGGACCGCGCGGCGCGGAGCCACAGCGCGC +
Preference number: 5 (lower is better)
Translates to: PPCARAGSRRAEYQS*MNRARTARRGATAR
Trigger: GCGCGCTGTGGCTCCGCGCCGCGCGGTCCGGGCTCTGTTCATTCATGATTGGTACTCGGCCCTCCGAGACCCAGCCCGAGCGCAGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS CCA 90 bp CCGCCCCTCCTGCCGCACACTCGGCTCCCCTCCCTGCGCTCGGGCTaGGTCTCGGAGGGCCGAGTACCAATCATGAATGAACAGAGCCCG +
Preference number: 5 (lower is better)
Translates to: PPLLPHTRLPSLRSG*VSEGRVPIMNEQSP
Trigger: CGGGCTCTGTTCATTCATGATTGGTACTCGGCCCTCCGAGACCCAGCCCGAGCGCAGGGAGGGGAGCCGAGTGTGCGGCAGGAGGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS GCA 90 bp GGCGGAGGGGAGCCAGGCTCTGCTGTCAGCACCCAGAAGGGACAGTaGCCACCTTGTGCACCCCAGGAACTTGGAGCCTGCCTGGGTGAA +
Preference number: 5 (lower is better)
Translates to: GGGEPGSAVSTQKGQ*PPCAPQELGACLGE
Trigger: TTCACCCAGGCAGGCTCCAAGTTCCTGGGGTGCACAAGGTGGGCACTGTCCCTTCTGGGTGCTGACAGCAGAGCCTGGCTCCCCTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377360.8
ENST00000517344.1
ENST00000518527.1
CDS GCA 90 bp TCCTCACCACGGGAGGACCTCAGGATGCCAGGGCCGGGACAGCACTaGCGGGGCACAAGGTACTCCAAGGGAACCGAGGAGGAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: SSPREDLRMPGPGQH*RGTRYSKGTEEESE
Trigger: TTCACTCTCCTCCTCGGTTCCCTTGGAGTACCTTGTGCCCCGGCAGTGCTGTCCCGGCCCTGGCATCCTGAGGTCCTCCCGTGGTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377360.8
ENST00000518527.1
CDS GCA 90 bp ACTCCTGCTGTCCACTTAAGTCCTCACCACGGGAGGACCTCAGGATaGCAGGGCCGGGACAGCACTGCCGGGGCACAAGGTACTCCAAGG +
Preference number: 5 (lower is better)
Translates to: TPAVHLSPHHGRTSG*QGRDSTAGAQGTPR
Trigger: CCTTGGAGTACCTTGTGCCCCGGCAGTGCTGTCCCGGCCCTGGCATCCTGAGGTCCTCCCGTGGTGAGGACTTAAGTGGACAGCAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377360.8
ENST00000518527.1
CDS-3UTR CAA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGCAAGGTCTGCCTGACTaGGAGGCAGTGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLQGLPD*EAVGWG
Trigger: CCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTG...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS GCA 90 bp GGGCGAGTGAGCTCCATGGAAATACCTGTCTCCACAGCCTGCAGGTaGACACACGTACTGCCCAAGCTATCCGGCTCTGCGGGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: GRVSSMEIPVSTACR*THVLPKLSGSAGPS
Trigger: ACTGGGGCCCGCAGAGCCGGATAGCTTGGGCAGTACGTGTGTGCACCTGCAGGCTGTGGAGACAGGTATTTCCATGGAGCTCACTCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CAA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACACAAGGTCTGCCTGACTaGGAGGCAGTGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTQGLPD*EAVGWG
Trigger: CCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTG...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS CCA 90 bp GCAGCTTGGTATTCAGCAAGCGTGGAGGCGAGGCTAGGAGGCTTCTaGCTTCCTTCTTCAGCCCCGCACATGCAGGGACTCAGGGCTAGC +
Preference number: 5 (lower is better)
Translates to: AAWYSASVEARLGGF*LPSSAPHMQGLRAS
Trigger: GCTAGCCCTGAGTCCCTGCATGTGCGGGGCTGAAGAAGGAAGCCAGAAGCCTCCTAGCCTCGCCTCCACGCTTGCTGAATACCAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTCAAGGTCTGCCTGACTaGGAGGCAGTGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GPLASRFTKVCLTWRQWAQGLPD*EAVGWG
Trigger: CCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTG...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGCAGCTCGCCTGCAGCTaGGTATTCAGCAAGCGTGGA +
Preference number: 5 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLQLACS*VFSKRG
Trigger: TCCACGCTTGCTGAATACCAAGCTGCAGGCGAGCTG...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS TCA 90 bp TCGAGGGTCGCCTTTGTTTGGTTTGCAGAGATGAGAAGGTGCCCATaGCGGCCCCCATGGCAGCGAAGACTTGAGTGCGAGTTGGGACCC +
Preference number: 5 (lower is better)
Translates to: SRVAFVWFAEMRRCP*RPPWQRRLECELGP
Trigger: GGGTCCCAACTCGCACTCAAGTCTTCGCTGCCATGGGGGCCGTCATGGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS CCA 90 bp TCTGAATTGGAGGAGAGAAAAGCGCCCGGCAGCTCGCCTGCAGCTTaGTATTCAGCAAGCGTGGAGGCGAGGCTAGGAGGCTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SELEERKAPGSSPAA*YSASVEARLGGFWL
Trigger: AAGCCAGAAGCCTCCTAGCCTCGCCTCCACGCTTGCTGAATACCAAGCTGCAGGCGAGCTGCCGGGCGCTTTTCTCTCCTCCAATTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS CCA 90 bp ATTTCACGAACCCAAGCTTGCATCTTTTGGAGCAGCCGCTCATGGTaGCGGAGGGGAGCCAGGCTCTGCTGTCAGCACCCAGAAGGGACA +
Preference number: 5 (lower is better)
Translates to: ISRTQACIFWSSRSW*RRGARLCCQHPEGT
Trigger: TGTCCCTTCTGGGTGCTGACAGCAGAGCCTGGCTCCCCTCCGCCACCATGAGCGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377360.8
ENST00000517344.1
ENST00000518527.1
CDS CCA 90 bp AAAAGTTTCAGGGAGGAGCACACGACCACCACTATTCCCAGTGTCTaGAGCCCTTCGGACTCGCCCTCTGCCCACATCCTCACAGCACCC +
Preference number: 5 (lower is better)
Translates to: KSFREEHTTTTIPSV*SPSDSPSAHILTAP
Trigger: GGGTGCTGTGAGGATGTGGGCAGAGGGCGAGTCCGAAGGGCTCCAGACACTGGGAATAGTGGTGGTCGTGTGCTCCTCCCTGAAACTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636734.1
CDS-3UTR CAA 90 bp CCAGTCTTGATGATGCTGAGTCTTCAATTGGCCACAGGGCGGAGGAGACGAGGCGTGCACCCCAGGAACTaGGAGCCTGCCTGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: PVLMMLSLQLATGRRRRGVHPRN*EPAWVN
Trigger: ATTCACCCAGGCAGGCTCCAAGTTCCTGGGGTGCAC...GCCTCGTCTCCTCCGCCCTGTGGCCAATTGAAGACTCAGCATCATCAAGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CAA 90 bp TGCTCTGTCCCTCCAGTCTTGATGATGCTGAGTCTTCAATTGGCCACAGGGCGGGGGACAGTGCCCACCTaGTGCACCCCAGGAACTTGG +
Preference number: 5 (lower is better)
Translates to: CSVPPVLMMLSLQLATGRGTVPT*CTPGTW
Trigger: CCAAGTTCCTGGGGTGCACAAGGTGGGCACTGTCCC...CCGCCCTGTGGCCAATTGAAGACTCAGCATCATCAAGACTGGAGGGACAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS GCA 90 bp CCATGGAAATACCTGTCTCCACAGCCTGCAGGTGCACACACGTACTaGCCAAGCTATCCGGCTCTGCGGGCCCCAGTTCCACTTTTGACT +
Preference number: 5 (lower is better)
Translates to: PWKYLSPQPAGAHTY*PSYPALRAPVPLLT
Trigger: AGTCAAAAGTGGAACTGGGGCCCGCAGAGCCGGATAGCTTGGGCAGTACGTGTGTGCACCTGCAGGCTGTGGAGACAGGTATTTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517344.1
ENST00000518527.1
CDS CCA 90 bp TCTGGGCCTCGAGCTGCTCCAGTCCCTCGGGCCGATGGCAAACCATaGTCATCTCCAGCTCATCTTCAATCTTATCTTTCGAGGGTCGCC +
Preference number: 5 (lower is better)
Translates to: SGPRAAPVPRADGKP*SSPAHLQSYLSRVA
Trigger: GGCGACCCTCGAAAGATAAGATTGAAGATGAGCTGGAGATGACCATGGTTTGCCATCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000434108.5
CDS-3UTR CAA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCGGCATTCTGGACTTCTaGGGAGGGACATGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLGILDF*GGTCSA
Trigger: AGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCC...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS CCA 90 bp TCTGGGCCTCGAGCTGCTCCAGTCCCTCGGGCCGATGGCAAACCATaGTCATCTCCAGCTCATCTTCAATCTTATCCAGGAACTCTCCGA +
Preference number: 5 (lower is better)
Translates to: SGPRAAPVPRADGKP*SSPAHLQSYPGTLR
Trigger: TCGGAGAGTTCCTGGATAAGATTGAAGATGAGCTGGAGATGACCATGGTTTGCCATCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGAAATCCCCGTGGTTaGTCTACTCTGAATTGGAGG +
Preference number: 5 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWRNPRG*STLNWR
Trigger: CCTCCAATTCAGAGTAGACAAACCACGGGGATTTCT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GTCTTCAATTGGCCACAGGGCGGAGGAGACGAGGCCTCAGTGGGGAGAGGGTGTTCTGTCCCTCCAGTCTaGATGATGCTGAGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: VFNWPQGGGDEASVGRGCSVPPV*MMLSLQ
Trigger: TTGAAGACTCAGCATCATCAAGACTGGAGGGACAGA...ACACCCTCTCCCCACTGAGGCCTCGTCTCCTCCGCCCTGTGGCCAATTGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CAA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGATTTGTCTACTCTGAATaGGAGGAGAGAAAAGCGCCC +
Preference number: 5 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGFVYSE*EERKAP
Trigger: GGGCGCTTTTCTCTCCTCCAATTCAGAGTAGACAAA...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAAGACTTGAGTGCGAGTaGGGACCCCGGGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRARLECE*GPRARP
Trigger: GGGCCGGGCCCGGGGTCCCAACTCGCACTCAAGTCT...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAAGACTTGAGTGCGAGTaGGGACCCCGGGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQRLECE*GPRARP
Trigger: GGGCCGGGCCCGGGGTCCCAACTCGCACTCAAGTCT...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGCTTGGAGTGTCCTCTTaGAGCACAGGATATGTGTAT +
Preference number: 5 (lower is better)
Translates to: GLLGRDMQRWAQAGDVVELGVSS*STGYVY
Trigger: ATACACATATCCTGTGCTCAAAGAGGACACTCCAAG...CTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCCAAGGTCTGCCTGACTaGGAGGCAGTGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KITAICRHSGLLGRDMQRQGLPD*EAVGWG
Trigger: CCCCCAGCCCACTGCCTCCAAGTCAGGCAGACCTTG...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp CCTCAGTGGGGAGAGGGTGTGGAAGGAGCAACTTGGATGTGCCAGTCTTCTATCATGCTGAGTCTTCAATaGGCCACAGGGCGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: PQWGEGVEGATWMCQSSIMLSLQ*ATGRRR
Trigger: TCTCCTCCGCCCTGTGGCCAATTGAAGACTCAGCAT...GATAGAAGACTGGCACATCCAAGTTGCTCCTTCCACACCCTCTCCCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS CCA 90 bp TCTGGGCCTCGAGCTGCTCCAGTCCCTCGGGCCGATGGCAAACCATaGTCATCTCCAGCTCATCTTCAATCTTATCTCTCTGATACTGGT +
Preference number: 5 (lower is better)
Translates to: SGPRAAPVPRADGKP*SSPAHLQSYLSDTG
Trigger: ACCAGTATCAGAGAGATAAGATTGAAGATGAGCTGGAGATGACCATGGTTTGCCATCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411494.5
ENST00000616807.1
CDS CCA 90 bp TCTGGGCCTCGAGCTGCTCCAGTCCCTCGGGCCGATGGCAAACCATaGTCATCTCCAGCTCATCTTCAATCTTATCGTCTGACAAGTCAA +
Preference number: 5 (lower is better)
Translates to: SGPRAAPVPRADGKP*SSPAHLQSYRLTSQ
Trigger: TTGACTTGTCAGACGATAAGATTGAAGATGAGCTGGAGATGACCATGGTTTGCCATCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636734.1
CDS-3UTR CAA 90 bp ATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATTTGTCTACTCTGAATaGGAGGAGAGAAAAGCGCCC +
Preference number: 5 (lower is better)
Translates to: MQRWAQAGDVVEIWTTGQFVYSE*EERKAP
Trigger: GGGCGCTTTTCTCTCCTCCAATTCAGAGTAGACAAA...TTGCCCAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp AATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGAGACTTGAGTGCGAGTaGGGACCCCGGGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: NYWSSFLETNDMGSLGHQRLECE*GPRARP
Trigger: GGGCCGGGCCCGGGGTCCCAACTCGCACTCAAGTCT...CTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGATATGGACCACTGCTTGGAGTGTCCTCTTaGAGCACAGGATATGTGTAT +
Preference number: 5 (lower is better)
Translates to: GTCSAGLKQGMWWRYGPLLGVSS*STGYVY
Trigger: ATACACATATCCTGTGCTCAAAGAGGACACTCCAAG...CAGTGGTCCATATCTCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGACTTGGAGTGTCCTCTTaGAGCACAGGATATGTGTAT +
Preference number: 5 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGLGVSS*STGYVY
Trigger: ATACACATATCCTGTGCTCAAAGAGGACACTCCAAG...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp CTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAGTGTGAGAGAATTATaGGTCCTCGTTTCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: LDFLGGTCSAGLKQGMWWSVREL*VLVSGN
Trigger: GTTTCCAGAAACGAGGACCAATAATTCTCTCACACT...CCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GGGATGCTCTATGATTTTCAGGCCTGGATGAGAGGCAGGGCGAGTGAGCTCCATTTCACGAACCCAAGCTaGCATCTTTTGGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: GMLYDFQAWMRGRASELHFTNPS*HLLEQP
Trigger: CGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGAA...ATGGAGCTCACTCGCCCTGCCTCTCATCCAGGCCTGAAAATCATAGAGCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CAA 90 bp TGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAAGCAGGGGATGTGGTGGAAGTGTGAGAGAATTATaGGTCCTCGTTTCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: WTSWEGHAALGSSRGCGGSVREL*VLVSGN
Trigger: GTTTCCAGAAACGAGGACCAATAATTCTCTCACACT...TCCACCACATCCCCTGCTTGAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GTGGGGAGAGGGTGTGGAAGGAGCAACTTGGATGTGCCAGTCTTCTATCCTGTGCTTTTGACTCCATCTTaGCTGAGGGTCCCAGTGATG +
Preference number: 5 (lower is better)
Translates to: VGRGCGRSNLDVPVFYPVLLTPS*LRVPVM
Trigger: CATCACTGGGACCCTCAGCAAAGATGGAGTCAAAAG...CACAGGATAGAAGACTGGCACATCCAAGTTGCTCCTTCCACACCCTCTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS TCA 90 bp AGTCCTCGAACTTCACGGAGCCTGTCTGAGTGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACGTGCTGGCATCTCCATGAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: SPRTSRSLSEWCRRH*RGNGHTCWHLHEGK
Trigger: TTTTCCCTCATGGAGATGCCAGCACGTATGCCCATTACCTCTTCAATGCCTTCGACACCACTCAGACAGGCTCCGTGAAGTTCGAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000411494.5
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS GCA 90 bp AGCTCATCTTCAATCTTATCTTTCGAGGGTCGCCTTTGTTTGGTTTaGAGAGATGAGAAGGTGCCCATGACGGCCCCCATGGCAGCGAAG +
Preference number: 5 (lower is better)
Translates to: SSSSILSFEGRLCLV*RDEKVPMTAPMAAK
Trigger: CTTCGCTGCCATGGGGGCCGTCATGGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTCGAAAGATAAGATTGAAGATGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328939.9
CDS-3UTR CAA 90 bp ATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATTGTTCTGGACATGGCAGCGAAGACTaGAGTGCGAGTTGGGACCCC +
Preference number: 5 (lower is better)
Translates to: MLGAGSPNLVMTDPNCSGHGSED*SASWDP
Trigger: GGGGTCCCAACTCGCACTCAAGTCTTCGCTGCCATG...TCCAGAACAATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTCTTGGAGTGTCCTCTTaGAGCACAGGATATGTGTAT +
Preference number: 5 (lower is better)
Translates to: GPLASRFTKVCLTWRQWALGVSS*STGYVY
Trigger: ATACACATATCCTGTGCTCAAAGAGGACACTCCAAG...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GCAGGGGATGTGGTGGAGATATGGACCACTGGGCAATGGCTCCCTTCCTGGACACAGTTACATGACATTTaGAAACAGCTGGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: AGDVVEIWTTGQWLPSWTQLHDI*KQLERP
Trigger: AGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACTG...TGTCCAGGAAGGGAGCCATTGCCCAGTGGTCCATATCTCCACCACATCCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS TCA 90 bp TTCAATCTTATCTTTCGAGGGTCGCCTTTGTTTGGTTTGCAGAGATaGGAAGGTGCCCATGACGGCCCCCATGGCAGCGAAGACTTGAGT +
Preference number: 5 (lower is better)
Translates to: FNLIFRGSPLFGLQR*EGAHDGPHGSEDLS
Trigger: ACTCAAGTCTTCGCTGCCATGGGGGCCGTCATGGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTCGAAAGATAAGATTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328939.9
CDS TCA 90 bp AGTCCTCGAACTTCACGGAGCCTGTCTGAGTGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACGTGCTGGCATCTACAAGGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SPRTSRSLSEWCRRH*RGNGHTCWHLQGRK
Trigger: TTTTCTGCCTTGTAGATGCCAGCACGTATGCCCATTACCTCTTCAATGCCTTCGACACCACTCAGACAGGCTCCGTGAAGTTCGAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000434108.5
CDS-3UTR CAA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCCAGTTACATGACATTTaGAAACAGCTGGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLQLHDI*KQLERP
Trigger: AGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACTG...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp CAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGGCTCAATGACATGGGCAGTTaGGGTCATCAGACAATATCA +
Preference number: 5 (lower is better)
Translates to: QQFAGILDFLGGTCSAGLNDMGS*GHQTIS
Trigger: TGATATTGTCTGATGACCCAAACTGCCCATGTCATT...GAGCCCAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATGGCATTCTGGACTTCTaGGGAGGGACATGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNGILDF*GGTCSA
Trigger: AGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCC...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS CCA 90 bp ACTCCATCTTTGCTGAGGGTCCCAGTGATGAGCTTAAAGATGGTCTaGGCAAATTTCACGAACCCAAGCTTGCATCTTTTGGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: TPSLLRVPVMSLKMV*ANFTNPSLHLLEQP
Trigger: CGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGAAATTTGCCCAGACCATCTTTAAGCTCATCACTGGGACCCTCAGCAAAGATGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517344.1
ENST00000518527.1
CDS-3UTR CAA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGCAGCTCGCCTGCAGCTaGGTATTCAGCAAGCGTGGA +
Preference number: 5 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRQLACS*VFSKRG
Trigger: TCCACGCTTGCTGAATACCAAGCTGCAGGCGAGCTG...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACATGGCAGCGAAGACTaGAGTGCGAGTTGGGACCCC +
Preference number: 5 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRHGSED*SASWDP
Trigger: GGGGTCCCAACTCGCACTCAAGTCTTCGCTGCCATG...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTGAGGGTCGCCTTTGTTaGGTTTGCAGAGATGAGAAG +
Preference number: 5 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLEGRLC*VCRDEK
Trigger: CTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTC...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp AATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCTGGAGGGTCGCCTTTGTTaGGTTTGCAGAGATGAGAAG +
Preference number: 5 (lower is better)
Translates to: NYSNLQAFWTSWEGHAALEGRLC*VCRDEK
Trigger: CTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTC...CAGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GGTCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTTTTCTGTCCCAAGAGTaGGTGTGTAAAATCAGAACA +
Preference number: 5 (lower is better)
Translates to: GPLASRFTKVCLTWRQWAFLSQE*VCKIRT
Trigger: TGTTCTGATTTTACACACCAACTCTTGGGACAGAAA...AGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TCCTCTTGCTTCCAGATTCACCAAGGTCTGCCTGACTTGGAGGCAGTGGGCTGGGACATATTAAAGGACTaGTACTACCAGCACAAATGC +
Preference number: 5 (lower is better)
Translates to: SSCFQIHQGLPDLEAVGWDILKD*YYQHKC
Trigger: GCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTC...CCAGCCCACTGCCTCCAAGTCAGGCAGACCTTGGTGAATCTGGAAGCAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAGGCATTCTGGACTTCTaGGGAGGGACATGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIGILDF*GGTCSA
Trigger: AGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCC...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGGGGACAGTGCCCACCTaGTGCACCCCAGGAACTTGG +
Preference number: 5 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMGTVPT*CTPGTW
Trigger: CCAAGTTCCTGGGGTGCACAAGGTGGGCACTGTCCC...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR CAA 90 bp CGTCTGATGATTCAAATGCTCTGTCCCTCCAGTCTTGATGATGCTGAGTCTTCACCAAGCTTGCATCTTTaGGAGCAGCCGCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: RLMIQMLCPSSLDDAESSPSLHL*EQPLMV
Trigger: CACCATGAGCGGCTGCTCCAAAAGATGCAAGCTTGG...TGAAGACTCAGCATCATCAAGACTGGAGGGACAGAGCATTTGAATCATCAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517344.1
CDS-3UTR CAA 90 bp ATTATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAGCTCGCCTGCAGCTaGGTATTCAGCAAGCGTGGA +
Preference number: 5 (lower is better)
Translates to: IIGPRFWKQMTWAVWVIRQLACS*VFSKRG
Trigger: TCCACGCTTGCTGAATACCAAGCTGCAGGCGAGCTG...TCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp ATCCCACATATGTTAGGTGCTGGCTCTCCCAATCTGGTCATGACAGATCCTAATAACAGGCACATTGGTTaGGGAGGCCATCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: IPHMLGAGSPNLVMTDPNNRHIG*GGHQRW
Trigger: CCATCTCTGATGGCCTCCCAAACCAATGTGCCTGTT...ATTAGGATCTGTCATGACCAGATTGGGAGAGCCAGCACCTAACATATGTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGGGCATTCTGGACTTCTaGGGAGGGACATGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: YKITAICRHSGLLGRDMQGILDF*GGTCSA
Trigger: AGCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCC...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGGTGCACCCCAGGAACTaGGAGCCTGCCTGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMVHPRN*EPAWVN
Trigger: ATTCACCCAGGCAGGCTCCAAGTTCCTGGGGTGCAC...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS CCA 90 bp ATCTTATCTTTGCTGAGGGTCCCAGTGATGAGCTTAAAGATGGTCTaGGCAAATTTCACGAACCCAAGCTTGCATCTTTTGGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: ILSLLRVPVMSLKMV*ANFTNPSLHLLEQP
Trigger: CGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGAAATTTGCCCAGACCATCTTTAAGCTCATCACTGGGACCCTCAGCAAAGATAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR CAA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCAGAAATCCCCGTGGTTaGTCTACTCTGAATTGGAGG +
Preference number: 5 (lower is better)
Translates to: KITAICRHSGLLGRDMQRRNPRG*STLNWR
Trigger: CCTCCAATTCAGAGTAGACAAACCACGGGGATTTCT...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAAACAGGCACATTGGTTaGGGAGGCCATCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRANRHIG*GGHQRW
Trigger: CCATCTCTGATGGCCTCCCAAACCAATGTGCCTGTT...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAAACAGGCACATTGGTTaGGGAGGCCATCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: WSSFLETNDMGSLGHQTINRHIG*GGHQRW
Trigger: CCATCTCTGATGGCCTCCCAAACCAATGTGCCTGTT...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTTCACGAACCCAAGCTaGCATCTTTTGGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLFTNPS*HLLEQP
Trigger: CGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGAA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR CAA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGCCAAGCTTGCATCTTTaGGAGCAGCCGCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMPSLHL*EQPLMV
Trigger: CACCATGAGCGGCTGCTCCAAAAGATGCAAGCTTGG...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR CAA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAAGAAATCCCCGTGGTTaGTCTACTCTGAATTGGAGG +
Preference number: 5 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRARNPRG*STLNWR
Trigger: CCTCCAATTCAGAGTAGACAAACCACGGGGATTTCT...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGGAGGGTCGCCTTTGTTaGGTTTGCAGAGATGAGAAG +
Preference number: 5 (lower is better)
Translates to: YKITAICRHSGLLGRDMQEGRLC*VCRDEK
Trigger: CTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTC...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS-3UTR CAA 90 bp GCAGTGGGCTGGGGGCACGTAAGCAGCATATTTTGTGCACTACTGTTTAAGCTTGACATATTAAAGGACTaGTACTACCAGCACAAATGC +
Preference number: 5 (lower is better)
Translates to: AVGWGHVSSIFCALLFKLDILKD*YYQHKC
Trigger: GCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTC...AAGCTTAAACAGTAGTGCACAAAATATGCTGCTTACGTGCCCCCAGCCCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp AAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGCGCGACATATTAAAGGACTaGTACTACCAGCACAAATGC +
Preference number: 5 (lower is better)
Translates to: KITAICRHSGLLGRDMQRDILKD*YYQHKC
Trigger: GCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTC...GCGCTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATACAGTTACATGACATTTaGAAACAGCTGGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: WSSFLETNDMGSLGHQTIQLHDI*KQLERP
Trigger: AGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACTG...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAACAGTTACATGACATTTaGAAACAGCTGGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQQLHDI*KQLERP
Trigger: AGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACTG...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGCAAATGACATGGGCAGTTaGGGTCATCAGACAATATCA +
Preference number: 5 (lower is better)
Translates to: AYFVHYCLSLSRGTFHRANDMGS*GHQTIS
Trigger: TGATATTGTCTGATGACCCAAACTGCCCATGTCATT...TGCCCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAAATGACATGGGCAGTTaGGGTCATCAGACAATATCA +
Preference number: 5 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQNDMGS*GHQTIS
Trigger: TGATATTGTCTGATGACCCAAACTGCCCATGTCATT...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGAATGACATGGGCAGTTaGGGTCATCAGACAATATCA +
Preference number: 5 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLNDMGS*GHQTIS
Trigger: TGATATTGTCTGATGACCCAAACTGCCCATGTCATT...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAATAAGTGTGAGAGAATTATaGGTCCTCGTTTCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: WSSFLETNDMGSLGHQTISVREL*VLVSGN
Trigger: GTTTCCAGAAACGAGGACCAATAATTCTCTCACACT...TATTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGAGTGTGAGAGAATTATaGGTCCTCGTTTCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLSVREL*VLVSGN
Trigger: GTTTCCAGAAACGAGGACCAATAATTCTCTCACACT...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGCTTGGAGTGTCCTCTTaGAGCACAGGATATGTGTAT +
Preference number: 5 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMLGVSS*STGYVY
Trigger: ATACACATATCCTGTGCTCAAAGAGGACACTCCAAG...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTCTGTTTCTGTCCCAAGAGTaGGTGTGTAAAATCAGAACA +
Preference number: 5 (lower is better)
Translates to: SEQGQIRVLRWLFSTMSLFLSQE*VCKIRT
Trigger: TGTTCTGATTTTACACACCAACTCTTGGGACAGAAA...CAGAGACATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp TATAAAATTACAGCAATTTGCAGGCATTCTGGACTTCTTGGGAGGGACATGCAGAGTGTGAGAGAATTATaGGTCCTCGTTTCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: YKITAICRHSGLLGRDMQSVREL*VLVSGN
Trigger: GTTTCCAGAAACGAGGACCAATAATTCTCTCACACT...CTGCATGTCCCTCCCAAGAAGTCCAGAATGCCTGCAAATTGCTGTAATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GCAGCATATTTTGTGCACTACTGTTTAAGCTTAAGCAGAGGGACCTTCCATAGGGACATATTAAAGGACTaGTACTACCAGCACAAATGC +
Preference number: 5 (lower is better)
Translates to: AAYFVHYCLSLSRGTFHRDILKD*YYQHKC
Trigger: GCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTC...CCTATGGAAGGTCCCTCTGCTTAAGCTTAAACAGTAGTGCACAAAATATGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp ATTGGTCCTCGTTTCTGGAAACAAATGACATGGGCAGTTTGGGTCATCAGACAAGACATATTAAAGGACTaGTACTACCAGCACAAATGC +
Preference number: 5 (lower is better)
Translates to: IGPRFWKQMTWAVWVIRQDILKD*YYQHKC
Trigger: GCATTTGTGCTGGTAGTACAAGTCCTTTAATATGTC...TTGTCTGATGACCCAAACTGCCCATGTCATTTGTTTCCAGAAACGAGGACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS-3UTR CAA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGTCTTCAATCTTATCTTaGCTGAGGGTCCCAGTGATG +
Preference number: 5 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMSSILS*LRVPVM
Trigger: CATCACTGGGACCCTCAGCAAAGATAAGATTGAAGA...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377360.8
CDS-3UTR CAA 90 bp GTAAAATCAGAACAAGGGCAGATCAGGGTGTTAAGGTGGTTGTTTAGTACAATGCAGTTACATGACATTTaGAAACAGCTGGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: VKSEQGQIRVLRWLFSTMQLHDI*KQLERP
Trigger: AGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACTG...CATTGTACTAAACAACCACCTTAACACCCTGATCTGCCCTTGTTCTGATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS CCA 90 bp TCCTTGTTGATGTCATACAAATTAAATGTCCACCTTAGTTTCTCGTaGACAGTTCCTCTCAATAAAATCGACAGAGCGGTTACAAAGTCC +
Preference number: 5 (lower is better)
Translates to: SLLMSYKLNVHLSFS*TVPLNKIDRAVTKS
Trigger: GGACTTTGTAACCGCTCTGTCGATTTTATTGAGAGGAACTGTCCACGAGAAACTAAGGTGGACATTTAATTTGTATGACATCAACAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000411494.5
ENST00000434108.5
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS CCA 72 bp TCGCCCAGGGCCGAGGACGGTGCCCTGAAGCCTGCCTaGCACTGGACACGGGGCCAGAGCGGCCGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: SPRAEDGALKPA*HWTRGQSGRPA
Trigger: GGCCGGGCGGCCGCTCTGGCCCCGTGTCCAGTGCCAGGCAGGCTTCAGGGCACCGTCCTCGGCCCTGGGCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS GCA 72 bp CGGCCCGGCGGTTCCCTCGCCCAGGGCCGAGGACGGTaGCCTGAAGCCTGCCTGGCACTGGACACGGGGCCA +
Preference number: 6 (lower is better)
Translates to: RPGGSLAQGRGR*PEACLALDTGP
Trigger: TGGCCCCGTGTCCAGTGCCAGGCAGGCTTCAGGGCACCGTCCTCGGCCCTGGGCGAGGGAACCGCCGGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS TCA 72 bp GCTCGGGCTGGGTCTCGGAGGGCCGAGTACCAATCATaGATGAACAGAGCCCGGACCGCGCGGCGCGGAGCC +
Preference number: 6 (lower is better)
Translates to: ARAGSRRAEYQS*MNRARTARRGA
Trigger: GGCTCCGCGCCGCGCGGTCCGGGCTCTGTTCATTCATGATTGGTACTCGGCCCTCCGAGACCCAGCCCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS TCA 72 bp GGGCTGGGTCTCGGAGGGCCGAGTACCAATCATGAATaGACAGAGCCCGGACCGCGCGGCGCGGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: GLGLGGPSTNHE*TEPGPRGAEPQ
Trigger: CTGTGGCTCCGCGCCGCGCGGTCCGGGCTCTGTTCATTCATGATTGGTACTCGGCCCTCCGAGACCCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000390656.8
CDS GCA 72 bp CGGGAGGACCTCAGGATGCCAGGGCCGGGACAGCACTaGCGGGGCACAAGGTACTCCAAGGGAACCGAGGAG +
Preference number: 6 (lower is better)
Translates to: REDLRMPGPGQH*RGTRYSKGTEE
Trigger: CTCCTCGGTTCCCTTGGAGTACCTTGTGCCCCGGCAGTGCTGTCCCGGCCCTGGCATCCTGAGGTCCTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377360.8
ENST00000518527.1
CDS GCA 72 bp GTCCACTTAAGTCCTCACCACGGGAGGACCTCAGGATaGCAGGGCCGGGACAGCACTGCCGGGGCACAAGGT +
Preference number: 6 (lower is better)
Translates to: VHLSPHHGRTSG*QGRDSTAGAQG
Trigger: ACCTTGTGCCCCGGCAGTGCTGTCCCGGCCCTGGCATCCTGAGGTCCTCCCGTGGTGAGGACTTAAGTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377360.8
ENST00000518527.1
CDS GCA 72 bp CCTGAAGCCAGGCTCCGGGAACAGCACAGCTGCCTCTaGAGCGAGTCTGGCTTCTGCATCCAGAGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: PEARLREQHSCL*SESGFCIQRAC
Trigger: GCAGGCTCTCTGGATGCAGAAGCCAGACTCGCTGCAGAGGCAGCTGTGCTGTTCCCGGAGCCTGGCTTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377360.8
ENST00000518527.1
CDS CCA 72 bp GAGGAGAGAAAAGCGCCCGGCAGCTCGCCTGCAGCTTaGTATTCAGCAAGCGTGGAGGCGAGGCTAGGAGGC +
Preference number: 6 (lower is better)
Translates to: EERKAPGSSPAA*YSASVEARLGG
Trigger: GCCTCCTAGCCTCGCCTCCACGCTTGCTGAATACCAAGCTGCAGGCGAGCTGCCGGGCGCTTTTCTCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS CAA 72 bp GGAGGAGAGAAAAGCGCCCGGCAGCTCGCCTGCAGCTaGGTATTCAGCAAGCGTGGAGGCGAGGCTAGGAGG +
Preference number: 6 (lower is better)
Translates to: GGEKSARQLACS*VFSKRGGEARR
Trigger: CCTCCTAGCCTCGCCTCCACGCTTGCTGAATACCAAGCTGCAGGCGAGCTGCCGGGCGCTTTTCTCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS GCA 72 bp TACCTGTCTCCACAGCCTGCAGGTGCACACACGTACTaGCCAAGCTATCCGGCTCTGCGGGCCCCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: YLSPQPAGAHTY*PSYPALRAPVP
Trigger: TGGAACTGGGGCCCGCAGAGCCGGATAGCTTGGGCAGTACGTGTGTGCACCTGCAGGCTGTGGAGACAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517344.1
ENST00000518527.1
CDS CCA 72 bp AGGGAGGAGCACACGACCACCACTATTCCCAGTGTCTaGAGCCCTTCGGACTCGCCCTCTGCCCACATCCTC +
Preference number: 6 (lower is better)
Translates to: REEHTTTTIPSV*SPSDSPSAHIL
Trigger: GAGGATGTGGGCAGAGGGCGAGTCCGAAGGGCTCCAGACACTGGGAATAGTGGTGGTCGTGTGCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636734.1
CDS GCA 72 bp CTCTGCAGCGAGTCTGGCTTCTGCATCCAGAGAGCCTaGAGGGCAAACTCTCCCTCCCTCTCTCCACCCACT +
Preference number: 6 (lower is better)
Translates to: LCSESGFCIQRA*RANSPSLSPPT
Trigger: AGTGGGTGGAGAGAGGGAGGGAGAGTTTGCCCTGCAGGCTCTCTGGATGCAGAAGCCAGACTCGCTGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377360.8
ENST00000518527.1
CDS CCA 72 bp GTCTGGGCCTCGAGCTGCTCCAGTCCCTCGGGCCGATaGCAAACCATGGTCATCTCCAGCTCATCTTCAATC +
Preference number: 6 (lower is better)
Translates to: VWASSCSSPSGR*QTMVISSSSSI
Trigger: GATTGAAGATGAGCTGGAGATGACCATGGTTTGCCATCGGCCCGAGGGACTGGAGCAGCTCGAGGCCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000411494.5
ENST00000434108.5
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS CAA 72 bp GTCTGGGCAAATTTCACGAACCCAAGCTTGCATCTTTaGGAGCAGCCGCTCATGGTGGCGGAGGGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VWANFTNPSLHL*EQPLMVAEGSQ
Trigger: CTGGCTCCCCTCCGCCACCATGAGCGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGAAATTTGCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377360.8
ENST00000517344.1
ENST00000518527.1
CDS TCA 72 bp GCCTTTGTTTGGTTTGCAGAGATGAGAAGGTGCCCATaGCGGCCCCCATGGCAGCGAAGACTTGAGTGCGAG +
Preference number: 6 (lower is better)
Translates to: AFVWFAEMRRCP*RPPWQRRLECE
Trigger: CTCGCACTCAAGTCTTCGCTGCCATGGGGGCCGTCATGGGCACCTTCTCATCTCTGCAAACCAAACAAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS TCA 72 bp CTACCCTGGAAAGAAATCCCCGTGGTTTGTCTACTCTaGATTGGAGGAGAGAAAAGCGCCCGGCAGCTCGCC +
Preference number: 6 (lower is better)
Translates to: LPWKEIPVVCLL*IGGEKSARQLA
Trigger: GGCGAGCTGCCGGGCGCTTTTCTCTCCTCCAATTCAGAGTAGACAAACCACGGGGATTTCTTTCCAGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS TCA 72 bp ATCTTTCGAGGGTCGCCTTTGTTTGGTTTGCAGAGATaGGAAGGTGCCCATGACGGCCCCCATGGCAGCGAA +
Preference number: 6 (lower is better)
Translates to: IFRGSPLFGLQR*EGAHDGPHGSE
Trigger: TTCGCTGCCATGGGGGCCGTCATGGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTCGAAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328939.9
CDS TCA 72 bp TTCTTTCGAGGGTCGCCTTTGTTTGGTTTGCAGAGATaGGAAGGTGCCCATGACGGCCCCCATGGCAGCGAA +
Preference number: 6 (lower is better)
Translates to: FFRGSPLFGLQR*EGAHDGPHGSE
Trigger: TTCGCTGCCATGGGGGCCGTCATGGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTCGAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000520740.5
CDS CCA 72 bp CTGGAAAGAAATCCCCGTGGTTTGTCTACTCTGAATTaGAGGAGAGAAAAGCGCCCGGCAGCTCGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: LERNPRGLSTLN*RREKRPAARLQ
Trigger: CTGCAGGCGAGCTGCCGGGCGCTTTTCTCTCCTCCAATTCAGAGTAGACAAACCACGGGGATTTCTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS CAA 72 bp CCTGGAAAGAAATCCCCGTGGTTTGTCTACTCTGAATaGGAGGAGAGAAAAGCGCCCGGCAGCTCGCCTGCA +
Preference number: 6 (lower is better)
Translates to: PGKKSPWFVYSE*EERKAPGSSPA
Trigger: TGCAGGCGAGCTGCCGGGCGCTTTTCTCTCCTCCAATTCAGAGTAGACAAACCACGGGGATTTCTTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328939.9
ENST00000390656.8
ENST00000520740.5
CDS CAA 72 bp TACCACCAGGCGATGTCTTTCGAGGGTCGCCTTTGTTaGGTTTGCAGAGATGAGAAGGTGCCCATGACGGCC +
Preference number: 6 (lower is better)
Translates to: YHQAMSFEGRLC*VCRDEKVPMTA
Trigger: GGCCGTCATGGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTCGAAAGACATCGCCTGGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411494.5
CDS CAA 90 bp GTGATGAGCTTAAAGATGGTCTGGGCAAATTTCACGAACCCAAGCTaGCATCTTTTGGAGCAGCCGCTCATGGTGGCGGAGGGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VMSLKMVWANFTNPS*HLLEQPLMVAEGSQ
Trigger: CTGGCTCCCCTCCGCCACCATGAGCGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGAAATTTGCCCAGACCATCTTTAAGCTCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377360.8
ENST00000517344.1
ENST00000518527.1
CDS TCA 72 bp ACTTCACGGAGCCTGTCTGAGTGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACGTGCTGGCATCTCCAT +
Preference number: 6 (lower is better)
Translates to: TSRSLSEWCRRH*RGNGHTCWHLH
Trigger: ATGGAGATGCCAGCACGTATGCCCATTACCTCTTCAATGCCTTCGACACCACTCAGACAGGCTCCGTGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000411494.5
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS TCA 72 bp ACTTCACGGAGCCTGTCTGAGTGGTGTCGAAGGCATTaGAGAGGTAATGGGCATACGTGCTGGCATCTACAA +
Preference number: 6 (lower is better)
Translates to: TSRSLSEWCRRH*RGNGHTCWHLQ
Trigger: TTGTAGATGCCAGCACGTATGCCCATTACCTCTTCAATGCCTTCGACACCACTCAGACAGGCTCCGTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390656.8
ENST00000434108.5
CDS GCA 72 bp TCAATCTTATCTTTCGAGGGTCGCCTTTGTTTGGTTTaGAGAGATGAGAAGGTGCCCATGACGGCCCCCATG +
Preference number: 6 (lower is better)
Translates to: SILSFEGRLCLV*RDEKVPMTAPM
Trigger: CATGGGGGCCGTCATGGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTCGAAAGATAAGATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328939.9
CDS CAA 72 bp TTAAAGATGGTCTGGGCAAATTTCACGAACCCAAGCTaGCATCTTTTGGAGCAGCCGCTCATGGTGGCGGAG +
Preference number: 6 (lower is better)
Translates to: LKMVWANFTNPS*HLLEQPLMVAE
Trigger: CTCCGCCACCATGAGCGGCTGCTCCAAAAGATGCAAGCTTGGGTTCGTGAAATTTGCCCAGACCATCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377360.8
ENST00000517344.1
ENST00000518527.1
CDS CAA 72 bp TCATCTTCAATCTTATCTTTCGAGGGTCGCCTTTGTTaGGTTTGCAGAGATGAGAAGGTGCCCATGACGGCC +
Preference number: 6 (lower is better)
Translates to: SSSILSFEGRLC*VCRDEKVPMTA
Trigger: GGCCGTCATGGGCACCTTCTCATCTCTGCAAACCAAACAAAGGCGACCCTCGAAAGATAAGATTGAAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328939.9
ENST00000434108.5
CDS CCA 72 bp TTGCTGAGGGTCCCAGTGATGAGCTTAAAGATGGTCTaGGCAAATTTCACGAACCCAAGCTTGCATCTTTTG +
Preference number: 6 (lower is better)
Translates to: LLRVPVMSLKMV*ANFTNPSLHLL
Trigger: CAAAAGATGCAAGCTTGGGTTCGTGAAATTTGCCCAGACCATCTTTAAGCTCATCACTGGGACCCTCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377360.8
ENST00000517344.1
ENST00000518527.1
CDS GCA 72 bp TTATTTTTGTCCATTTTCTGGAAGAAGACGTCCACATaGTGCCTTGGAGTGTCCTCTTTGAGCACAGGATAT +
Preference number: 6 (lower is better)
Translates to: LFLSIFWKKTST*CLGVSSLSTGY
Trigger: ATATCCTGTGCTCAAAGAGGACACTCCAAGGCAGCATGTGGACGTCTTCTTCCAGAAAATGGACAAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000411494.5
ENST00000434108.5
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1
CDS CAA 72 bp TCCATCATCTCCTCTTTGTTTATGTATCCGTCCTTGTaGATGTCATACAAATTAAATGTCCACCTTAGTTTC +
Preference number: 6 (lower is better)
Translates to: SIISSLFMYPSL*MSYKLNVHLSF
Trigger: GAAACTAAGGTGGACATTTAATTTGTATGACATCAACAAGGACGGATACATAAACAAAGAGGAGATGATGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328939.9
ENST00000377360.8
ENST00000390656.8
ENST00000411494.5
ENST00000434108.5
ENST00000520740.5
ENST00000616807.1
ENST00000636734.1