RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNH6 (Homo sapiens)

Ensembl gene IDs: ENSG00000173826

Ensembl transcript IDs: ENST00000314672.10, ENST00000456941.6, ENST00000580652.5, ENST00000581784.5, ENST00000583023.1, ENST00000583465.1

Found 687 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATCTGGCTGATGGTCCTGTACTTGCCCCTGCCTGTGCCTGGCCCTaGTCCGCCTGGCCTGCCATGAGAGCCCTCGGAGCCCAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: DLADGPVLAPACAWP*SAWPAMRALGAQEA
Trigger: AGCTTCCTGGGCTCCGAGGGCTCTCATGGCAGGCCAGGCGGACCAGGGCCAGGCACAGGCAGGGGCAAGTACAGGACCATCAGCCAGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR CCA 90 bp TGGGTGACCTTCTCAGTGACGTTCTGTGTCCGCTCCACCACCTTATaGGGCGCGATGATCTCAATCTCCGTGGTGGAGCTGGAGCGGTGC +
Preference number: 1 (lower is better)
Translates to: WVTFSVTFCVRSTTL*GAMISISVVELERC
Trigger: GCACCGCTCCAGCTCCACCACGGAGATTGAGATCATCGCGCCCCATAAGGTGGTGGAGCGGACACAGAACGTCACTGAGAAGGTCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR CCA 90 bp CAGTGGCCCCAACTCCCTGCAAATCCAGGATCTGAGCCATGTCTCTaGAAGTCCAGCTGCTTGGGAACAGAGCCAAGGTGTTCAGGGAGG +
Preference number: 1 (lower is better)
Translates to: QWPQLPANPGSEPCL*KSSCLGTEPRCSGR
Trigger: CCTCCCTGAACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCCAGAGACATGGCTCAGATCCTGGATTTGCAGGGAGTTGGGGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR TCA 90 bp GGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTaGGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGT +
Preference number: 1 (lower is better)
Translates to: GLLFKWSPGGGWEKS*ASSPTPSWVTWISS
Trigger: ACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR CCA 90 bp TTCTCCAAGTTGAACTCCACGAAGTTGAGCGTGAACTGTGGGATCTaGCTGATGGTCCTGTACTTGCCCCTGCCTGTGCCTGGCCCTGGT +
Preference number: 1 (lower is better)
Translates to: FSKLNSTKLSVNCGI*LMVLYLPLPVPGPG
Trigger: ACCAGGGCCAGGCACAGGCAGGGGCAAGTACAGGACCATCAGCCAGATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAACTTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR TCA 90 bp TGTTCTGAGGATGGTGCCAGAGTTTTGTCCGTTGCCACAGCCAGGTaGGGCATCCTGGGGGAGGAGTTCCTGTGCTTTGGACTACAGTCA +
Preference number: 1 (lower is better)
Translates to: CSEDGARVLSVATAR*GILGEEFLCFGLQS
Trigger: TGACTGTAGTCCAAAGCACAGGAACTCCTCCCCCAGGATGCCTCACCTGGCTGTGGCAACGGACAAAACTCTGGCACCATCCTCAGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR GCA 90 bp TTATGGGGCGCGATGATCTCAATCTCCGTGGTGGAGCTGGAGCGGTaGTTCTCCAAGTTGAACTCCACGAAGTTGAGCGTGAACTGTGGG +
Preference number: 1 (lower is better)
Translates to: LWGAMISISVVELER*FSKLNSTKLSVNCG
Trigger: CCCACAGTTCACGCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGATTGAGATCATCGCGCCCCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR TCA 90 bp GCGGTCCAGCTTCCGTGCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAACCGCCTGGCCTGCCATaGGAGCCCTCGGAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: AVQLPCYAHQPQQPRCLQPPGLP*EPSEPR
Trigger: CCTGGGCTCCGAGGGCTCTCATGGCAGGCCAGGCGG...TTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp AGAGCACGTCGCCGAGGTGCACCAGCGTGTCCCCAGGCGGCGCGTGGGTGGTCTTACTCCTCCAGGCGCTaGCGCAGTGGGTTGGGGATC +
Preference number: 2 (lower is better)
Translates to: RARRRGAPACPQAARGWSYSSRR*RSGLGI
Trigger: GATCCCCAACCCACTGCGCCAGCGCCTGGAGGAGTA...AGACCACCCACGCGCCGCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp AGAGCACGTCGCCGAGGTGCACCAGCGTGTCCCCAGGCGGCGCGTGGGTGGTCTTGCCGTTGTAGCGCTTaGCAAGCTGCACACCCAGGC +
Preference number: 2 (lower is better)
Translates to: RARRRGAPACPQAARGWSCRCSA*QAAHPG
Trigger: GCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCA...AGACCACCCACGCGCCGCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp GCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTACTTGCCCCTGCCTGTaGCTGGCCCTGGTCCGCCTG +
Preference number: 2 (lower is better)
Translates to: ATRTSRSSRAVFNSPIRVTCPCL*LALVRL
Trigger: CAGGCGGACCAGGGCCAGGCACAGGCAGGGGCAAGT...AACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCAGGCTGGAGTGCAGTaGTGCGGCCTCGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPQAGVQ*CGLGSL
Trigger: CAGGGAGCCGAGGCCGCACCACTGCACTCCAGCCTG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR-3UTR CCA 90 bp AGAGCACGTCGCCGAGGTGCACCAGCGTGTCCCCAGGCGGCGCGTGGGTGGTCTGTTGAGCGTGAACTGTaGGATCTGGCTGATGGTCCT +
Preference number: 2 (lower is better)
Translates to: RARRRGAPACPQAARGWSVEREL*DLADGP
Trigger: AGGACCATCAGCCAGATCCCACAGTTCACGCTCAAC...AGACCACCCACGCGCCGCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTCACCCAGGCTGGAGTaGAGTGGTGCGGCCTCGGCT +
Preference number: 2 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPSPRLE*SGAASA
Trigger: AGCCGAGGCCGCACCACTGCACTCCAGCCTGGGTGA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR-3UTR CCA 90 bp GCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGAGCCCAGGAAGCTCTaGGACAACAGGCGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: ATRTSRSSRAVFNSPIRVEPRKL*DNRRWD
Trigger: GTCCCAGCGCCTGTTGTCCCAGAGCTTCCTGGGCTC...AACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp TGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCAGCCTGCCCAGGGACAGGACCTaGGTGACCTTCTCAGTGACG +
Preference number: 2 (lower is better)
Translates to: WRSCKMRLRSEDTRDSSLPRDRT*VTFSVT
Trigger: CGTCACTGAGAAGGTCACCCAGGTCCTGTCCCTGGG...CAGGCTGGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTTACAGGCGAGCCACTaGACCCGGCCACCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPLQASH*TRPPPQ
Trigger: TTGGGGAGGTGGCCGGGTGCAGTGGCTCGCCTGTAA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
3UTR-3UTR GCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAGCTGGAGTGCAGTGGTaGGGCCTCGGCTCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: PTLHQACCLNGALEEAGKAGVQW*GLGSLQ
Trigger: TTGCAGGGAGCCGAGGCCGCACCACTGCACTCCAGC...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR-3UTR CCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGCAGGCTGGAGTGCAGTaGTGCGGCCTCGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSQAGVQ*CGLGSL
Trigger: CAGGGAGCCGAGGCCGCACCACTGCACTCCAGCCTG...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR CAA 90 bp AAGCTCTGGGACAACAGGCGCTGGGACAAGCTGCGGCTGCTGCACTaGGCCAGGAGCTGGGCCAGGTCCTCGAAGTTGAGAATGAACATG +
Preference number: 2 (lower is better)
Translates to: KLWDNRRWDKLRLLH*ARSWARSSKLRMNM
Trigger: CATGTTCATTCTCAACTTCGAGGACCTGGCCCAGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTCCCAGCGCCTGTTGTCCCAGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR TCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTACTGTGGGATCTGGCTaGTGGTCCTGTACTTGCCCC +
Preference number: 2 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPTVGSG*WSCTCP
Trigger: GGGGCAAGTACAGGACCATCAGCCAGATCCCACAGT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR TCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTATTCGTCCTGATCGCTaGGCAGGAAGGCGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPIRPDR*AGRRLS
Trigger: ACTCAGCCGCCTTCCTGCTCAGCGATCAGGACGAAT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR TCA 90 bp CTGGGTCGCTGCCGTTGTAGCGCTTGCCAAGCTGCACACCCAGGCTGTCCAGCCCCTCATCATTGGTGTTaGCATAGGTGGTGCGGAAGT +
Preference number: 2 (lower is better)
Translates to: LGRCRCSACQAAHPGCPAPHHWC*HRWCGS
Trigger: ACTTCCGCACCACCTATGTCAACACCAATGATGAGG...GGCTGGACAGCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCAGCGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTAGCACGTCGCCGAGGTaGACCAGCGTGTCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSSTSPR*TSVSPG
Trigger: GCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCT...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp TTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTCTGTGCAGGAGGCAGAAGCCTGTGCCTGGCCCTaGTCCGCCTGGCCTGCCATG +
Preference number: 2 (lower is better)
Translates to: LDYSHPSLHSLGSVQEAEACAWP*SAWPAM
Trigger: CATGGCAGGCCAGGCGGACCAGGGCCAGGCACAGGC...TTCTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCTGTTCATCTGGGCCTaGAGCTGCTCTAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPLFIWA*SCSSLE
Trigger: CTCCAGGCTAGAGCAGCTCCAGGCCCAGATGAACAG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR TCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCCCGGGCCTTGGTGCTaGGCCATGAGGTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFPGPWC*AMRCWR
Trigger: CCTCCAGCACCTCATGGCTCAGCACCAAGGCCCGGG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR-3UTR CCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAATCACCCACGCCATCCTaGGTCACCTGGATCAGCAGT +
Preference number: 2 (lower is better)
Translates to: PTLHQACCLNGALEEAGKSPTPS*VTWISS
Trigger: ACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGA...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR-3UTR CCA 90 bp CTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGAGCCAGTGCGGAAGATGCGGCTGCTGCACTTaGCCAGGAGCTGGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: LSSIAQSGLWSHRSQCGRCGCCT*PGAGPG
Trigger: ACCTGGCCCAGCTCCTGGCCAAGTGCAGCAGCCGCA...TCTTCCGCACTGGCTCCGATGAGACCACAACCCTGATTGGGCTATTGAAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTACAGGCGAGCCACTaGACCCGGCCACCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSLQASH*TRPPPQ
Trigger: TTGGGGAGGTGGCCGGGTGCAGTGGCTCGCCTGTAA...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
3UTR-3UTR GCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGGACAAGCTGCGGCTaGTGCACTTGGCCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSGTSCG*CTWPGA
Trigger: AGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTCCC...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGCTGAAAGCTGGGCAGTaGTGCAGCAGTGCGCGGTGC +
Preference number: 2 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGLKAGQ*CSSARC
Trigger: GCACCGCGCACTGCTGCAGCACTGCCCAGCTTTCAG...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGGCTTTGGGGGCTGTaGCTTGGGGGCATTTCCTGC +
Preference number: 2 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSGLWGL*LGGISC
Trigger: GCAGGAAATGCCCCCAAGGCACAGCCCCCAAAGCCC...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCAGCCTCCCCAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LNGALEEAGKSRELLHPRSLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTGGGGAGGCT...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR-3UTR CCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACTCACCCACGCCATCCTaGGTCACCTGGATCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHSPTPS*VTWISS
Trigger: ACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGA...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR-3UTR CCA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTGGGACAACAGGCGCTaGGACAAGCTGCGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGWDNRR*DKLRLL
Trigger: CAGCAGCCGCAGCTTGTCCCAGCGCCTGTTGTCCCA...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR CAA 90 bp GTGGTGGAGCTGGAGCGGTGCTTCTCCAAGTTGAACTCCACGAAGTaGAGCGTGAACTGTGGGATCTGGCTGATGGTCCTGTACTTGCCC +
Preference number: 2 (lower is better)
Translates to: VVELERCFSKLNSTK*SVNCGIWLMVLYLP
Trigger: GGGCAAGTACAGGACCATCAGCCAGATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR TCA 90 bp TTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTCTGTGCAGGAGGCAGAACGCCGTGATTCGTCCTaGTCGCTGAGCAGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: LDYSHPSLHSLGSVQEAERRDSS*SLSRKA
Trigger: CGCCTTCCTGCTCAGCGATCAGGACGAATCACGGCG...TTCTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR TCA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGCAATCTGGGTCTTCCTaGGGGCTTTGGGGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGQSGSS*GLWGLC
Trigger: GCACAGCCCCCAAAGCCCTCAGGAAGACCCAGATTG...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp AGGCATCCTGGGGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCGACTGCAGGTATAGCTaGAGGCCCCACGCCGTGATT +
Preference number: 2 (lower is better)
Translates to: RHPGGGVPVLWTTVIQVSDCRYS*RPHAVI
Trigger: AATCACGGCGTGGGGCCTGCAGCTATACCTGCAGTC...GGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCCCAGGATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACGGCTTGCTGTTTAAATaGAGCCCTGGAGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHGLLFK*SPGGGW
Trigger: CCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCC...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR-3UTR CCA 90 bp AGGCATCCTGGGGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCCCAAGGCCAGGTCATTaGAGGCAGGGGCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: RHPGGGVPVLWTTVIQVSPRPGH*RQGLPE
Trigger: TTCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGG...GGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCCCAGGATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGGGCTTCTGGAGGAGCTaGAAGATGCGGCTGAGGTCT +
Preference number: 2 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGGFWRS*KMRLRS
Trigger: AGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR TCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGGCTGGGAAAAGTCGTaGGCTTCTTCACCCACGCCA +
Preference number: 2 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFGWEKS*ASSPTP
Trigger: TGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR CAA 90 bp ATGATCTCAATCTCCGTGGTGGAGCTGGAGCGGTGCTTCTCCAAGTaGAACTCCACGAAGTTGAGCGTGAACTGTGGGATCTGGCTGATG +
Preference number: 2 (lower is better)
Translates to: MISISVVELERCFSK*NSTKLSVNCGIWLM
Trigger: CATCAGCCAGATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGATTGAGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR CAA 90 bp AACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTaGGAGTTCAGTGGCCCCAACTCCCTGCAAATCCAGGATCTGAGC +
Preference number: 2 (lower is better)
Translates to: NSHLAHLQSPHGVFI*EFSGPNSLQIQDLS
Trigger: GCTCAGATCCTGGATTTGCAGGGAGTTGGGGCCACTGAACTCCAAGATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGTGGAGCTGGAGCGGTaGTTCTCCAAGTTGAACTCC +
Preference number: 2 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFVELER*FSKLNS
Trigger: GGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCAC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR GCA 90 bp TTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTCTGTGCAGGAGGCAGAATCTCATCGGAGCCAGTaGGGAAGATCAGGAGGTCGA +
Preference number: 2 (lower is better)
Translates to: LDYSHPSLHSLGSVQEAESHRSQ*GRSGGR
Trigger: TCGACCTCCTGATCTTCCGCACTGGCTCCGATGAGA...TTCTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp TTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTCTGTGCAGGAGGCAGAACATTCTTTCCTAGGATaGCCACGACCACGTCGTCGC +
Preference number: 2 (lower is better)
Translates to: LDYSHPSLHSLGSVQEAEHSFLG*PRPRRR
Trigger: GCGACGACGTGGTCGTGGCCATCCTAGGAAAGAATG...TTCTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGGAAGTCCAGCTGCTTaGGAACAGAGCCAAGGTGTT +
Preference number: 2 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFGSPAA*EQSQGV
Trigger: AACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGTGAACTGTGGGATCTaGCTGATGGTCCTGTACTTG +
Preference number: 2 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFVNCGI*LMVLYL
Trigger: CAAGTACAGGACCATCAGCCAGATCCCACAGTTCAC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR TCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTACTTTATTAGCTGTGTaGCACTCCACTGCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFTLLAV*HSTALK
Trigger: CTTGAGGGCAGTGGAGTGTCACACAGCTAATAAAGT...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR CCA 72 bp GATGGTCCTGTACTTGCCCCTGCCTGTGCCTGGCCCTaGTCCGCCTGGCCTGCCATGAGAGCCCTCGGAGCC +
Preference number: 3 (lower is better)
Translates to: DGPVLAPACAWP*SAWPAMRALGA
Trigger: GGCTCCGAGGGCTCTCATGGCAGGCCAGGCGGACCAGGGCCAGGCACAGGCAGGGGCAAGTACAGGACCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR GCA 72 bp ACTTGTCCTGCACCGAGGGGCCCGAGGCTGGGTCGCTaGCGTTGTAGCGCTTGCCAAGCTGCACACCCAGGC +
Preference number: 3 (lower is better)
Translates to: TCPAPRGPRLGR*RCSACQAAHPG
Trigger: GCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCAGCGACCCAGCCTCGGGCCCCTCGGTGCAGGACAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp AGAGCACGTCGCCGAGGTGCACCAGCGTGTCCCCAGGCGGCGCGTGGGTGGTCTCGGTGCTTCTCCAAGTaGAACTCCACGAAGTTGAGC +
Preference number: 3 (lower is better)
Translates to: RARRRGAPACPQAARGWSRCFSK*NSTKLS
Trigger: GCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCG...AGACCACCCACGCGCCGCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR TCA 72 bp GGGGCATGGGCTTCTGGAGGAGCTGCAAGATGCGGCTaGGGTCTGAGGACACGCGGGACTCCAGCCTGTTCA +
Preference number: 3 (lower is better)
Translates to: GAWASGGAARCG*GLRTRGTPACS
Trigger: TGAACAGGCTGGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCCCATGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR GCA 72 bp CTTGTGCAGGTCGCAGTAGGTCAGAGCCCGCACGTCTaGACTGGACTTGCCTGGCTGGGCATGGAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: LVQVAVGQSPHV*TGLAWLGMEAD
Trigger: GTCAGCCTCCATGCCCAGCCAGGCAAGTCCAGTGCAGACGTGCGGGCTCTGACCTACTGCGACCTGCACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp AGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGCGCGGCGCCTGCAGCTaGTACTCCGGCAGCACATCC +
Preference number: 3 (lower is better)
Translates to: SRSSRAVFNSPIRVVVSSRGACS*YSGSTS
Trigger: GGATGTGCTGCCGGAGTACAAGCTGCAGGCGCCGCG...CGATGAGACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGTCTTCCTGAGGGCTTaGGGGGCTGTGCCTTGGGGG +
Preference number: 3 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPVFLRA*GAVPWG
Trigger: CCCCCAAGGCACAGCCCCCAAAGCCCTCAGGAAGAC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGCTGCGTCCCGCAGGTaGAAGGTGACCTCCAGCTTA +
Preference number: 3 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPAASRR*KVTSSL
Trigger: TAAGCTGGAGGTCACCTTCAACCTGCGGGACGCAGC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTCCTTAACTCTCACCTaGCCCACCTTCAGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPSLTLT*PTFSPL
Trigger: GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
3UTR-3UTR CAA 90 bp GGCTTCTGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCTTGAACTCCACGAAGTaGAGCGTGAACTGTGGGATC +
Preference number: 3 (lower is better)
Translates to: GFWRSCKMRLRSEDTRDSLNSTK*SVNCGI
Trigger: GATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAA...GGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp AGGCATCCTGGGGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCTGGGTGGTCTTGAACTaGACGGCTAGCGCGCGCAGG +
Preference number: 3 (lower is better)
Translates to: RHPGGGVPVLWTTVIQVSWVVLN*TASARR
Trigger: CCTGCGCGCGCTAGCCGTCAAGTTCAAGACCACCCA...GGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCCCAGGATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGCTGATGGTCCTGTACTaGCCCCTGCCTGTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGLMVLY*PLPVPG
Trigger: GCCAGGCACAGGCAGGGGCAAGTACAGGACCATCAG...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTAGGGCTGTGACATACTaGTCCTGCACCGAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSRAVTY*SCTEGP
Trigger: GGGCCCCTCGGTGCAGGACAAGTATGTCACAGCCCT...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGGAAACCTTGGTGGTCTaGGCTGCCAGGAGCCTGTCG +
Preference number: 3 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGETLVV*AARSLS
Trigger: CGACAGGCTCCTGGCAGCCAAGACCACCAAGGTTTC...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR CCA 72 bp TTCTCAGTGACGTTCTGTGTCCGCTCCACCACCTTATaGGGCGCGATGATCTCAATCTCCGTGGTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: FSVTFCVRSTTL*GAMISISVVEL
Trigger: CAGCTCCACCACGGAGATTGAGATCATCGCGCCCCATAAGGTGGTGGAGCGGACACAGAACGTCACTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTTCCTTAACTCTCACCTaGCCCACCTTCAGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: VSFFTHAILGHLDQQFVASLTLT*PTFSPL
Trigger: GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGA...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR-3UTR CAA 90 bp AGGCATCCTGGGGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCCCAATCAGGGTaGTGGTCTCATCGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: RHPGGGVPVLWTTVIQVSIAQSG*WSHRSQ
Trigger: CTGGCTCCGATGAGACCACAACCCTGATTGGGCTAT...GGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCCCAGGATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR TCA 72 bp AGTTCAGTGGCCCCAACTCCCTGCAAATCCAGGATCTaGGCCATGTCTCTGGAAGTCCAGCTGCTTGGGAAC +
Preference number: 3 (lower is better)
Translates to: SSVAPTPCKSRI*AMSLEVQLLGN
Trigger: GTTCCCAAGCAGCTGGACTTCCAGAGACATGGCTCAGATCCTGGATTTGCAGGGAGTTGGGGCCACTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR GCA 72 bp GCGATGATCTCAATCTCCGTGGTGGAGCTGGAGCGGTaGTTCTCCAAGTTGAACTCCACGAAGTTGAGCGTG +
Preference number: 3 (lower is better)
Translates to: AMISISVVELER*FSKLNSTKLSV
Trigger: CACGCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGATTGAGATCATCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCACCCTGCACCAGGCTaGCTGTTTAAATGGAGCCCT +
Preference number: 3 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSHPAPG*LFKWSP
Trigger: AGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTG...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR CCA 72 bp CAACTCCCTGCAAATCCAGGATCTGAGCCATGTCTCTaGAAGTCCAGCTGCTTGGGAACAGAGCCAAGGTGT +
Preference number: 3 (lower is better)
Translates to: QLPANPGSEPCL*KSSCLGTEPRC
Trigger: ACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCCAGAGACATGGCTCAGATCCTGGATTTGCAGGGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp TTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTCTGTGCAGGAGGCAGAATCCTTAACTCTCACCTaGCCCACCTTCAGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: LDYSHPSLHSLGSVQEAESLTLT*PTFSPL
Trigger: GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGA...TTCTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR CCA 72 bp TCAGTCCCCTCATGGTGTCTTTATCTTGGAGTTCAGTaGCCCCAACTCCCTGCAAATCCAGGATCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: SVPSWCLYLGVQ*PQLPANPGSEP
Trigger: TGGCTCAGATCCTGGATTTGCAGGGAGTTGGGGCCACTGAACTCCAAGATAAAGACACCATGAGGGGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR-3UTR CAA 90 bp AGGCATCCTGGGGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCGCTGCATCTGACTGGTaGTCACTGAGAAAGAAACCT +
Preference number: 3 (lower is better)
Translates to: RHPGGGVPVLWTTVIQVSAASDW*SLRKKP
Trigger: AGGTTTCTTTCTCAGTGACAACCAGTCAGATGCAGC...GGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCCCAGGATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR GCA 72 bp GCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTaGTATGTGTTATGTTCTATCTCAGTACAAAACTAC +
Preference number: 3 (lower is better)
Translates to: AAHLGSVYCMNC*YVLCSISVQNY
Trigger: GTAGTTTTGTACTGAGATAGAACATAACACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp AGAGCACGTCGCCGAGGTGCACCAGCGTGTCCCCAGGCGGCGCGTGGGTGGTCTTGTGGTAGCGCGCGGTaGCCGAGTACAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RARRRGAPACPQAARGWSCGSAR*PSTGAG
Trigger: TCCAGCGCCTGTACTCGGGCACCGCGCGCTACCACA...AGACCACCCACGCGCCGCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp CGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCCCGCCTGGCCTGCCATaGGAGCCCTCGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RTSRSSRAVFNSPIRVVVPPGLP*EPSEPR
Trigger: CCTGGGCTCCGAGGGCTCTCATGGCAGGCCAGGCGG...GACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGCCCCTGCCTGTGCCTaGCCCTGGTCCGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLAPACA*PWSAWP
Trigger: AGGCCAGGCGGACCAGGGCCAGGCACAGGCAGGGGC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp TGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCAGCCTGCGAGGGGCCCGAGGCTaGGTCGCTGCCGTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: WRSCKMRLRSEDTRDSSLRGARG*VAAVVA
Trigger: CGCTACAACGGCAGCGACCCAGCCTCGGGCCCCTCG...CAGGCTGGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp TGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCAGCCTGGGGCAGCCTGGGCCCTaGACTCGTCGTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: WRSCKMRLRSEDTRDSSLGQPGP*TRRLRG
Trigger: GCCTCGGAGACGACGAGTCCAGGGCCCAGGCTGCCC...CAGGCTGGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp GCGGTCCAGCTTCCGTGCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAACCGAGGCTGGGTCGCTaGCGTTGTAGCGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: AVQLPCYAHQPQQPRCLQPRLGR*RCSACQ
Trigger: TTGGCAAGCGCTACAACGGCAGCGACCCAGCCTCGG...TTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGCCTGTGCCTGGCCCTaGTCCGCCTGGCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLACAWP*SAWPAM
Trigger: CATGGCAGGCCAGGCGGACCAGGGCCAGGCACAGGC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GCGGTCCAGCTTCCGTGCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATACTCCTCCAGGCGCTaGCGCAGTGGGTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: AVQLPCYAHQPQQPRCLQYSSRR*RSGLGI
Trigger: GATCCCCAACCCACTGCGCCAGCGCCTGGAGGAGTA...TTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGGGCAGCCTGGGCCCTaGACTCGTCGTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLGQPGP*TRRLRG
Trigger: GCCTCGGAGACGACGAGTCCAGGGCCCAGGCTGCCC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCGCCTGGCCTGCCATaGGAGCCCTCGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSPPGLP*EPSEPR
Trigger: CCTGGGCTCCGAGGGCTCTCATGGCAGGCCAGGCGG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGAGCGACGTGGCCCCTaGGGACCGGCATCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLERRGP*GPASFG
Trigger: GCCGAAAGATGCCGGTCCGCAGGGGCCACGTCGCTC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGGCGGGACACGGCGCTaGTTGGTGTGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLGGTRR*LVCWGL
Trigger: CAGGCCCCAACACACCAAGCAGCGCCGTGTCCCGCC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CTGGGTCGCTGCCGTTGTAGCGCTTGCCAAGCTGCACACCCAGGCTGTCCAGCCGGGACAAGCTGCGGCTaGTGCACTTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LGRCRCSACQAAHPGCPAGTSCG*CTWPGA
Trigger: AGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTCCC...GGCTGGACAGCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCAGCGACCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCTGGTCCGCCTGGCCTaGCATGAGAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLLVRLA*HESPRS
Trigger: GCTCCGAGGGCTCTCATGGCAGGCCAGGCGGACCAG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCCTGGTCCGCCTGGCCTaGCATGAGAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RTSRSSRAVFNSPIRVVVLVRLA*HESPRS
Trigger: GCTCCGAGGGCTCTCATGGCAGGCCAGGCGGACCAG...GACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp CTGGGTCGCTGCCGTTGTAGCGCTTGCCAAGCTGCACACCCAGGCTGTCCAGCCAAAGCTGGGCAGTGCTaGAGCAGTGCGCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGRCRCSACQAAHPGCPAKAGQC*SSARCR
Trigger: CCTGCACCGCGCACTGCTGCAGCACTGCCCAGCTTT...GGCTGGACAGCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCAGCGACCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp CTGGGTCGCTGCCGTTGTAGCGCTTGCCAAGCTGCACACCCAGGCTGTCCAGCCCAGAGCCCGCACGTCTaGACTGGACTTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGRCRCSACQAAHPGCPAQSPHV*TGLAWL
Trigger: CAGCCAGGCAAGTCCAGTGCAGACGTGCGGGCTCTG...GGCTGGACAGCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCAGCGACCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTGGCCCTGGTCCGCCTaGCCTGCCATGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLWPWSA*PAMRAL
Trigger: GAGGGCTCTCATGGCAGGCCAGGCGGACCAGGGCCA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTTGGCCCTGGTCCGCCTaGCCTGCCATGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ATRTSRSSRAVFNSPIRVWPWSA*PAMRAL
Trigger: GAGGGCTCTCATGGCAGGCCAGGCGGACCAGGGCCA...AACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp AGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGCCCCTGCCTGTGCCTaGCCCTGGTCCGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SRSSRAVFNSPIRVVVSSAPACA*PWSAWP
Trigger: AGGCCAGGCGGACCAGGGCCAGGCACAGGCAGGGGC...CGATGAGACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGGGCAGCCTGGGCCCTaGACTCGTCGTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPGQPGP*TRRLRG
Trigger: GCCTCGGAGACGACGAGTCCAGGGCCCAGGCTGCCC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCGCCTGGCCTGCCATaGGAGCCCTCGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVPPGLP*EPSEPR
Trigger: CCTGGGCTCCGAGGGCTCTCATGGCAGGCCAGGCGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGCAGGCCCCACGCCGTaGTTCGTCCTGATCGCTGAG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLAGPTP*FVLIAE
Trigger: CTCAGCGATCAGGACGAATCACGGCGTGGGGCCTGC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCTTGCCGGCGCCGCTaGAAGCTGGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPPCRRR*KLGSAA
Trigger: TGCAGCACTGCCCAGCTTTCAGCGGCGCCGGCAAGG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp TGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCAGCCTGGAGGCCAGATGCATCTaGGATGCTCAGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: WRSCKMRLRSEDTRDSSLEARCI*DAQGRG
Trigger: GCCCCTCCCCTGAGCATCTCAGATGCATCTGGCCTC...CAGGCTGGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp CTGGGTCGCTGCCGTTGTAGCGCTTGCCAAGCTGCACACCCAGGCTGTCCAGCCCAATCTGGGTCTTCCTaGGGGCTTTGGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LGRCRCSACQAAHPGCPAQSGSS*GLWGLC
Trigger: GCACAGCCCCCAAAGCCCTCAGGAAGACCCAGATTG...GGCTGGACAGCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCAGCGACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGCTGCAAGATGCGGCTaGGGTCTGAGGACACGCGGG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLAARCG*GLRTRG
Trigger: CCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCCGGGCCTTGGTGCTaGGCCATGAGGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPPGPWC*AMRCWR
Trigger: CCTCCAGCACCTCATGGCTCAGCACCAAGGCCCGGG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCGAAGCCCACGCTGGTaGGGCTGCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLRSPRW*GCRCRP
Trigger: TGGCCTGCATCTGCAGCCTCACCAGCGTGGGCTTCG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGAGCGACGTGGCCCCTaGGGACCGGCATCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLERRGP*GPASFG
Trigger: GCCGAAAGATGCCGGTCCGCAGGGGCCACGTCGCTC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCTGGTCCGCCTGGCCTaGCATGAGAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLLVRLA*HESPRS
Trigger: GCTCCGAGGGCTCTCATGGCAGGCCAGGCGGACCAG...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTACTTGCCCCTGCCTGTaGCTGGCCCTGGTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPTCPCL*LALVRL
Trigger: CAGGCGGACCAGGGCCAGGCACAGGCAGGGGCAAGT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTGCGGCTGCTGCACTTaGCCAGGAGCTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLCGCCT*PGAGPG
Trigger: ACCTGGCCCAGCTCCTGGCCAAGTGCAGCAGCCGCA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTGGCCCTGGTCCGCCTaGCCTGCCATGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPWPWSA*PAMRAL
Trigger: GAGGGCTCTCATGGCAGGCCAGGCGGACCAGGGCCA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GGCTTCTGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCTTGCCTGGCTGGGCATaGAGGCTGACGGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GFWRSCKMRLRSEDTRDSLPGWA*RLTGSP
Trigger: TGGGGAACCCGTCAGCCTCCATGCCCAGCCAGGCAA...GGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp GCGGTCCAGCTTCCGTGCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATCCAGCCTGTTCATCTaGGCCTGGAGCTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: AVQLPCYAHQPQQPRCLQSSLFI*AWSCSS
Trigger: GCTAGAGCAGCTCCAGGCCCAGATGAACAGGCTGGA...TTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCCGTGGCCCTGGGGCATaGGCTTCTGGAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RTSRSSRAVFNSPIRVVVRGPGA*ASGGAA
Trigger: TGCAGCTCCTCCAGAAGCCCATGCCCCAGGGCCACG...GACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTAGCCACAGGCGCCACTaGCTCCCGGCGTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPSHRRH*LPASPS
Trigger: AGACGGAGACGCCGGGAGCCAGTGGCGCCTGTGGCT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456941.6
3UTR CAA 72 bp GACAACAGGCGCTGGGACAAGCTGCGGCTGCTGCACTaGGCCAGGAGCTGGGCCAGGTCCTCGAAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: DNRRWDKLRLLH*ARSWARSSKLR
Trigger: TCTCAACTTCGAGGACCTGGCCCAGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTCCCAGCGCCTGTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCGCCTGGCCTGCCATaGGAGCCCTCGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVPPGLP*EPSEPR
Trigger: CCTGGGCTCCGAGGGCTCTCATGGCAGGCCAGGCGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGCAGGCCCCACGCCGTaGTTCGTCCTGATCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLAGPTP*FVLIAE
Trigger: CTCAGCGATCAGGACGAATCACGGCGTGGGGCCTGC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGCAGGCCCCACGCCGTaGTTCGTCCTGATCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPAGPTP*FVLIAE
Trigger: CTCAGCGATCAGGACGAATCACGGCGTGGGGCCTGC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGAGGCCAGATGCATCTaGGATGCTCAGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLEARCI*DAQGRG
Trigger: GCCCCTCCCCTGAGCATCTCAGATGCATCTGGCCTC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAGGCGGGACACGGCGCTaGTTGGTGTGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKGGTRR*LVCWGL
Trigger: CAGGCCCCAACACACCAAGCAGCGCCGTGTCCCGCC...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTACTTGCCCCTGCCTGTaGCTGGCCCTGGTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSTCPCL*LALVRL
Trigger: CAGGCGGACCAGGGCCAGGCACAGGCAGGGGCAAGT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp AGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGCGGTCCAGCTTCCGTaGTACGCGCACCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRSSRAVFNSPIRVVVSSAVQLP*YAHQPQ
Trigger: CTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC...CGATGAGACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCAAAGCTGGGCAGTGCTaGAGCAGTGCGCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLKAGQC*SSARCR
Trigger: CCTGCACCGCGCACTGCTGCAGCACTGCCCAGCTTT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCAGAGCCCGCACGTCTaGACTGGACTTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLQSPHV*TGLAWL
Trigger: CAGCCAGGCAAGTCCAGTGCAGACGTGCGGGCTCTG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGGGCTTTGGGGGCTGTaGCTTGGGGGCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLGLWGL*LGGISC
Trigger: GCAGGAAATGCCCCCAAGGCACAGCCCCCAAAGCCC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCTGCGGCTGCTGCACTTaGCCAGGAGCTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLCGCCT*PGAGPG
Trigger: ACCTGGCCCAGCTCCTGGCCAAGTGCAGCAGCCGCA...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTGCGGCTGCTGCACTTaGCCAGGAGCTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPCGCCT*PGAGPG
Trigger: ACCTGGCCCAGCTCCTGGCCAAGTGCAGCAGCCGCA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTGGGACAACAGGCGCTaGGACAAGCTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLWDNRR*DKLRLL
Trigger: CAGCAGCCGCAGCTTGTCCCAGCGCCTGTTGTCCCA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAATGGCCCTGGTCCGCCTaGCCTGCCATGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKWPWSA*PAMRAL
Trigger: GAGGGCTCTCATGGCAGGCCAGGCGGACCAGGGCCA...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACGCCTGTGCCTGGCCCTaGTCCGCCTGGCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHACAWP*SAWPAM
Trigger: CATGGCAGGCCAGGCGGACCAGGGCCAGGCACAGGC...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTGCCCCTGCCTGTGCCTaGCCCTGGTCCGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSFFTHAILGHLDQQFVAAPACA*PWSAWP
Trigger: AGGCCAGGCGGACCAGGGCCAGGCACAGGCAGGGGC...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp AGAGCACGTCGCCGAGGTGCACCAGCGTGTCCCCAGGCGGCGCGTGGGTGGTCTGTGAACTGTGGGATCTaGCTGATGGTCCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: RARRRGAPACPQAARGWSVNCGI*LMVLYL
Trigger: CAAGTACAGGACCATCAGCCAGATCCCACAGTTCAC...AGACCACCCACGCGCCGCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCCGAGGGGCCCGAGGCTaGGTCGCTGCCGTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSRGARG*VAAVVA
Trigger: CGCTACAACGGCAGCGACCCAGCCTCGGGCCCCTCG...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGGCGCCGCTGAAAGCTaGGCAGTGCTGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPGAAES*AVLQQC
Trigger: GCACTGCTGCAGCACTGCCCAGCTTTCAGCGGCGCC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCTGGACTTGCCTGGCTaGGCATGGAGGCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLLDLPG*AWRLTG
Trigger: ACCCGTCAGCCTCCATGCCCAGCCAGGCAAGTCCAG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCCCGCACGTCTGCACTaGACTTGCCTGGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLPARLH*TCLAGH
Trigger: ATGCCCAGCCAGGCAAGTCCAGTGCAGACGTGCGGG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGGGAGGGGCTGCATCTaGGTGCCCTGGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPGRGCI*VPWSTR
Trigger: CCTTGTGCTCCAGGGCACCCAGATGCAGCCCCTCCC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583023.1
CDS-3UTR CCA 90 bp GCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTCCAGGCAGCGGAAGCTaGAGGCTCCACTCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: ATRTSRSSRAVFNSPIRVPGSGS*RLHSGV
Trigger: TACTCCCGAGTGGAGCCTCCAGCTTCCGCTGCCTGG...AACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGTGTGTTGGGGCCTGTaGGGAAGTCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLVCWGL*GSRRCR
Trigger: CCTGCACCTGCGACTTCCTCACAGGCCCCAACACAC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
CDS-3UTR TCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCTTGCCGGCGCCGCTaGAAGCTGGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVPCRRR*KLGSAA
Trigger: TGCAGCACTGCCCAGCTTTCAGCGGCGCCGGCAAGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACCCTTGCCGGCGCCGCTaGAAGCTGGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHPCRRR*KLGSAA
Trigger: TGCAGCACTGCCCAGCTTTCAGCGGCGCCGGCAAGG...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGGGACAAGCTGCGGCTaGTGCACTTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLGTSCG*CTWPGA
Trigger: AGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTCCC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCCTGGTCCGCCTGGCCTaGCATGAGAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSLVRLA*HESPRS
Trigger: GCTCCGAGGGCTCTCATGGCAGGCCAGGCGGACCAG...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCACTTGCCCCTGCCTGTaGCTGGCCCTGGTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVTCPCL*LALVRL
Trigger: CAGGCGGACCAGGGCCAGGCACAGGCAGGGGCAAGT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCGCGGTCCAGCTTCCGTaGTACGCGCACCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSAVQLP*YAHQPQ
Trigger: CTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGCGGTCCAGCTTCCGTaGTACGCGCACCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVAVQLP*YAHQPQ
Trigger: CTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGGCGGTCCAGCTTCCGTaGTACGCGCACCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQAVQLP*YAHQPQ
Trigger: CTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGCAGGCCAGCCAGTaGGCTATGAGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLMQASQ*AMSAKV
Trigger: CACCTTCGCGCTCATAGCGCACTGGCTGGCCTGCAT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTAAAGCTGGGCAGTGCTaGAGCAGTGCGCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPKAGQC*SSARCR
Trigger: CCTGCACCGCGCACTGCTGCAGCACTGCCCAGCTTT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCTGAAAGCTGGGCAGTaGTGCAGCAGTGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLLKAGQ*CSSARC
Trigger: GCACCGCGCACTGCTGCAGCACTGCCCAGCTTTCAG...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCAGCACGTCGCCGAGGTaGACCAGCGTGTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVSTSPR*TSVSPG
Trigger: GCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGAGCACGTCGCCGAGGTaGACCAGCGTGTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSSTSPR*TSVSPG
Trigger: GCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCT...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCAGAGCCCGCACGTCTaGACTGGACTTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLQSPHV*TGLAWL
Trigger: CAGCCAGGCAAGTCCAGTGCAGACGTGCGGGCTCTG...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGGGCTTTGGGGGCTGTaGCTTGGGGGCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLGLWGL*LGGISC
Trigger: GCAGGAAATGCCCCCAAGGCACAGCCCCCAAAGCCC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCAGGCGCCCGCCACCATaGCCAGCTAAAGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLRRPPP*PAKGNP
Trigger: GGGATTTCCTTTAGCTGGGCATGGTGGCGGGCGCCT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCCAGGCAGCGGAAGCTaGAGGCATCCTTGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLPGSGS*RHPCGS
Trigger: ACTACCGCAAGGATGCCTCCAGCTTCCGCTGCCTGG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTGGGACAACAGGCGCTaGGACAAGCTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPWDNRR*DKLRLL
Trigger: CAGCAGCCGCAGCTTGTCCCAGCGCCTGTTGTCCCA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp TGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCAGCCTGTCTCCGTGGTGGAGCTaGAGCGGTGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: WRSCKMRLRSEDTRDSSLSPWWS*SGASPS
Trigger: ACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGA...CAGGCTGGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCTACTCCTCCAGGCGCTaGCGCAGTGGGTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLYSSRR*RSGLGI
Trigger: GATCCCCAACCCACTGCGCCAGCGCCTGGAGGAGTA...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAGGCGCCGCTGAAAGCTaGGCAGTGCTGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKGAAES*AVLQQC
Trigger: GCACTGCTGCAGCACTGCCCAGCTTTCAGCGGCGCC...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTGGCGCCGCTGAAAGCTaGGCAGTGCTGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSGAAES*AVLQQC
Trigger: GCACTGCTGCAGCACTGCCCAGCTTTCAGCGGCGCC...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCTGGACTTGCCTGGCTaGGCATGGAGGCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLLDLPG*AWRLTG
Trigger: ACCCGTCAGCCTCCATGCCCAGCCAGGCAAGTCCAG...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCCGCACGTCTGCACTaGACTTGCCTGGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPPARLH*TCLAGH
Trigger: ATGCCCAGCCAGGCAAGTCCAGTGCAGACGTGCGGG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCGGTCCAGCTTCCGTGCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAAAGAAAGAAACCTTGGTaGTCTTGGCTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AVQLPCYAHQPQQPRCLQRKKPW*SWLPGA
Trigger: GGCTCCTGGCAGCCAAGACCACCAAGGTTTCTTTCT...TTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTGGGGCATGGGCTTCTaGAGGAGCTGCAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: RTSRSSRAVFNSPIRVVVWGMGF*RSCKMR
Trigger: CCGCATCTTGCAGCTCCTCCAGAAGCCCATGCCCCA...GACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCGTGGCCCTGGGGCATaGGCTTCTGGAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSRGPGA*ASGGAA
Trigger: TGCAGCTCCTCCAGAAGCCCATGCCCCAGGGCCACG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCTTCCAGAATGTAGCTaGCGTGGCCCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLLPECS*RGPGAW
Trigger: CCATGCCCCAGGGCCACGCCAGCTACATTCTGGAAG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCAGCCACAGGCGCCACTaGCTCCCGGCGTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVSHRRH*LPASPS
Trigger: AGACGGAGACGCCGGGAGCCAGTGGCGCCTGTGGCT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCACTGTGGGATCTGGCTaGTGGTCCTGTACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLTVGSG*WSCTCP
Trigger: GGGGCAAGTACAGGACCATCAGCCAGATCCCACAGT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATTCGTCCTGATCGCTaGGCAGGAAGGCGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLIRPDR*AGRRLS
Trigger: ACTCAGCCGCCTTCCTGCTCAGCGATCAGGACGAAT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCTTGCCGGCGCCGCTaGAAGCTGGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVPCRRR*KLGSAA
Trigger: TGCAGCACTGCCCAGCTTTCAGCGGCGCCGGCAAGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTGGAGCCTCGGGAGATaGAGTAGAGGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLWSLGR*SRGWRA
Trigger: TGCTCTCCACCCTCTACTTCATCTCCCGAGGCTCCA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAGGTGCTGGAGGGTTCTaGGCTGGGAGGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKGAGGF*AGRLRA
Trigger: TGCTCTGAGCCTCCCAGCTCAGAACCCTCCAGCACC...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTCCCGGGCCTTGGTGCTaGGCCATGAGGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSFFTHAILGHLDQQFVAPGPWC*AMRCWR
Trigger: CCTCCAGCACCTCATGGCTCAGCACCAAGGCCCGGG...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCGGCGGGACACGGCGCTaGTTGGTGTGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVGGTRR*LVCWGL
Trigger: CAGGCCCCAACACACCAAGCAGCGCCGTGTCCCGCC...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
CDS-3UTR GCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCACTTGCCCCTGCCTGTaGCTGGCCCTGGTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVTCPCL*LALVRL
Trigger: CAGGCGGACCAGGGCCAGGCACAGGCAGGGGCAAGT...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTGCCGTTGTAGCGCTTaGCAAGCTGCACACCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPCRCSA*QAAHPG
Trigger: GCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGTGGTAGCGCGCGGTaGCCGAGTACAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSCGSAR*PSTGAG
Trigger: TCCAGCGCCTGTACTCGGGCACCGCGCGCTACCACA...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGTGGTAGCGCGCGGTaGCCGAGTACAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVCGSAR*PSTGAG
Trigger: TCCAGCGCCTGTACTCGGGCACCGCGCGCTACCACA...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAAAGCTGGGCAGTGCTaGAGCAGTGCGCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKKAGQC*SSARCR
Trigger: CCTGCACCGCGCACTGCTGCAGCACTGCCCAGCTTT...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCTTGGGGGCATTTCCTaGAGTAGCTCAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLLGGIS*SSSGQR
Trigger: CCTCTGGCCTGAGCTACTGCAGGAAATGCCCCCAAG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTGGGCTTTGGGGGCTGTaGCTTGGGGGCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSGLWGL*LGGISC
Trigger: GCAGGAAATGCCCCCAAGGCACAGCCCCCAAAGCCC...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGGCTTCTGGAGGAGCTaGAAGATGCGGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLGFWRS*KMRLRS
Trigger: AGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTTTACAGGCGAGCCACTaGACCCGGCCACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSLQASH*TRPPPQ
Trigger: TTGGGGAGGTGGCCGGGTGCAGTGGCTCGCCTGTAA...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACGCTGGAGTGCAGTGGTaGGGCCTCGGCTCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHAGVQW*GLGSLQ
Trigger: TTGCAGGGAGCCGAGGCCGCACCACTGCACTCCAGC...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGCCCTGGTCCGCCTaGCCTGCCATGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVWPWSA*PAMRAL
Trigger: GAGGGCTCTCATGGCAGGCCAGGCGGACCAGGGCCA...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTCTCCGTGGTGGAGCTaGAGCGGTGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLSPWWS*SGASPS
Trigger: ACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGGCGCCGCTGAAAGCTaGGCAGTGCTGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVGAAES*AVLQQC
Trigger: GCACTGCTGCAGCACTGCCCAGCTTTCAGCGGCGCC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGGGCGCCGCTGAAAGCTaGGCAGTGCTGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSGAAES*AVLQQC
Trigger: GCACTGCTGCAGCACTGCCCAGCTTTCAGCGGCGCC...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCTGGACTTGCCTGGCTaGGCATGGAGGCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSLDLPG*AWRLTG
Trigger: ACCCGTCAGCCTCCATGCCCAGCCAGGCAAGTCCAG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCAGCAGATCTGCCCGCTaGATCTTGTGCAGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLSRSAR*ILCRSQ
Trigger: CTGCGACCTGCACAAGATCCAGCGGGCAGATCTGCT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCAAACCTTGGTGGTCTTaGCTGCCAGGAGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLKPWWS*LPGACR
Trigger: CCGACAGGCTCCTGGCAGCCAAGACCACCAAGGTTT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTAAACCTTGGTGGTCTTaGCTGCCAGGAGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ATRTSRSSRAVFNSPIRVKPWWS*LPGACR
Trigger: CCGACAGGCTCCTGGCAGCCAAGACCACCAAGGTTT...AACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCGTGGCCCTGGGGCATaGGCTTCTGGAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVRGPGA*ASGGAA
Trigger: TGCAGCTCCTCCAGAAGCCCATGCCCCAGGGCCACG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCGTGGCCCTGGGGCATaGGCTTCTGGAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQRGPGA*ASGGAA
Trigger: TGCAGCTCCTCCAGAAGCCCATGCCCCAGGGCCACG...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCTTCCAGAATGTAGCTaGCGTGGCCCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPLPECS*RGPGAW
Trigger: CCATGCCCCAGGGCCACGCCAGCTACATTCTGGAAG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCCAAGGCCAGGTCATTaGAGGCAGGGGCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLPRPGH*RQGLPE
Trigger: TTCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTCAGGCTGGAGTGCAGTaGTGCGGCCTCGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSFFTHAILGHLDQQFVAQAGVQ*CGLGSL
Trigger: CAGGGAGCCGAGGCCGCACCACTGCACTCCAGCCTG...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGTGTGTTGGGGCCTGTaGGGAAGTCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVVCWGL*GSRRCR
Trigger: CCTGCACCTGCGACTTCCTCACAGGCCCCAACACAC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATTCGTCCTGATCGCTaGGCAGGAAGGCGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLIRPDR*AGRRLS
Trigger: ACTCAGCCGCCTTCCTGCTCAGCGATCAGGACGAAT...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGCGCCGTGATTCGTCCTaGTCGCTGAGCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSRRDSS*SLSRKA
Trigger: CGCCTTCCTGCTCAGCGATCAGGACGAATCACGGCG...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCGCCGTGATTCGTCCTaGTCGCTGAGCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVRRDSS*SLSRKA
Trigger: CGCCTTCCTGCTCAGCGATCAGGACGAATCACGGCG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCTGCGGCGGGGGTGGCTaGCCACCTCATCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSCGGGG*PPHHWC
Trigger: ACACCAATGATGAGGTGGTCAGCCACCCCCGCCGCA...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGCGGCGGGGGTGGCTaGCCACCTCATCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVCGGGG*PPHHWC
Trigger: ACACCAATGATGAGGTGGTCAGCCACCCCCGCCGCA...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTGGAGCCTCGGGAGATaGAGTAGAGGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPWSLGR*SRGWRA
Trigger: TGCTCTCCACCCTCTACTTCATCTCCCGAGGCTCCA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGGGAGGGGCTGCATCTaGCTGGTTGTCACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLGRGCI*LVVTEK
Trigger: TTTCTCAGTGACAACCAGTCAGATGCAGCCCCTCCC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACGAGGCCAGATGCATCTaGGATGCTCAGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHEARCI*DAQGRG
Trigger: GCCCCTCCCCTGAGCATCTCAGATGCATCTGGCCTC...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAACAATCTGGGTCTTCCTaGGGGCTTTGGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKQSGSS*GLWGLC
Trigger: GCACAGCCCCCAAAGCCCTCAGGAAGACCCAGATTG...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCGCTGCAAGATGCGGCTaGGGTCTGAGGACACGCGGG +
Preference number: 4 (lower is better)
Translates to: LNGALEEAGKSRELLHPRAARCG*GLRTRG
Trigger: CCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGC...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCGCTGCAAGATGCGGCTaGGGTCTGAGGACACGCGGG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVAARCG*GLRTRG
Trigger: CCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGC...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGAGCGACGTGGCCCCTaGGGACCGGCATCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSERRGP*GPASFG
Trigger: GCCGAAAGATGCCGGTCCGCAGGGGCCACGTCGCTC...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGGGACAAGCTGCGGCTaGTGCACTTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVGTSCG*CTWPGA
Trigger: AGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTCCC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGACTGCAGGTATAGCTaGAGGCCCCACGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLDCRYS*RPHAVI
Trigger: AATCACGGCGTGGGGCCTGCAGCTATACCTGCAGTC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTCTCATCGGAGCCAGTaGGGAAGATCAGGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLSHRSQ*GRSGGR
Trigger: TCGACCTCCTGATCTTCCGCACTGGCTCCGATGAGA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTATGCAGGCCAGCCAGTaGGCTATGAGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSMQASQ*AMSAKV
Trigger: CACCTTCGCGCTCATAGCGCACTGGCTGGCCTGCAT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCCGAGGCTGGGTCGCTaGCGTTGTAGCGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQPRLGR*RCSACQ
Trigger: TTGGCAAGCGCTACAACGGCAGCGACCCAGCCTCGG...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCTGAAAGCTGGGCAGTaGTGCAGCAGTGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQLKAGQ*CSSARC
Trigger: GCACCGCGCACTGCTGCAGCACTGCCCAGCTTTCAG...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCTGAAAGCTGGGCAGTaGTGCAGCAGTGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVLKAGQ*CSSARC
Trigger: GCACCGCGCACTGCTGCAGCACTGCCCAGCTTTCAG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCAGATGCATCTGAGATaGTCAGGGGAGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLQMHLR*SGEGLH
Trigger: ATGCAGCCCCTCCCCTGAGCATCTCAGATGCATCTG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCGGGCTTTGGGGGCTGTaGCTTGGGGGCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSGLWGL*LGGISC
Trigger: GCAGGAAATGCCCCCAAGGCACAGCCCCCAAAGCCC...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGGCTTCTGGAGGAGCTaGAAGATGCGGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPGFWRS*KMRLRS
Trigger: AGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACTTACAGGCGAGCCACTaGACCCGGCCACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHLQASH*TRPPPQ
Trigger: TTGGGGAGGTGGCCGGGTGCAGTGGCTCGCCTGTAA...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGTTACAGGCGAGCCACTaGACCCGGCCACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQLQASH*TRPPPQ
Trigger: TTGGGGAGGTGGCCGGGTGCAGTGGCTCGCCTGTAA...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCGGACACGGCGCTGCTTaGTGTGTTGGGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSGHGAA*CVGACE
Trigger: CTCACAGGCCCCAACACACCAAGCAGCGCCGTGTCC...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGGACACGGCGCTGCTTaGTGTGTTGGGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVGHGAA*CVGACE
Trigger: CTCACAGGCCCCAACACACCAAGCAGCGCCGTGTCC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCAGGCAGCGGAAGCTaGAGGCATCCTTGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSPGSGS*RHPCGS
Trigger: ACTACCGCAAGGATGCCTCCAGCTTCCGCTGCCTGG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGAGCCCAGGAAGCTCTaGGACAACAGGCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVEPRKL*DNRRWD
Trigger: GTCCCAGCGCCTGTTGTCCCAGAGCTTCCTGGGCTC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACGAGCCCAGGAAGCTCTaGGACAACAGGCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHEPRKL*DNRRWD
Trigger: GTCCCAGCGCCTGTTGTCCCAGAGCTTCCTGGGCTC...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGCCTGTGCCTGGCCCTaGTCCGCCTGGCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFACAWP*SAWPAM
Trigger: CATGGCAGGCCAGGCGGACCAGGGCCAGGCACAGGC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTCTCCGTGGTGGAGCTaGAGCGGTGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPSPWWS*SGASPS
Trigger: ACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCAGGGACAGGACCTaGGTGACCTTCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSPRDRT*VTFSVT
Trigger: CGTCACTGAGAAGGTCACCCAGGTCCTGTCCCTGGG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCGAGGGGCCCGAGGCTaGGTCGCTGCCGTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPRGARG*VAAVVA
Trigger: CGCTACAACGGCAGCGACCCAGCCTCGGGCCCCTCG...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTACTCCTCCAGGCGCTaGCGCAGTGGGTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSYSSRR*RSGLGI
Trigger: GATCCCCAACCCACTGCGCCAGCGCCTGGAGGAGTA...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCTACTCCTCCAGGCGCTaGCGCAGTGGGTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVYSSRR*RSGLGI
Trigger: GATCCCCAACCCACTGCGCCAGCGCCTGGAGGAGTA...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGTACTCCTCCAGGCGCTaGCGCAGTGGGTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQYSSRR*RSGLGI
Trigger: GATCCCCAACCCACTGCGCCAGCGCCTGGAGGAGTA...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCATTCTTTCCTAGGATaGCCACGACCACGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLHSFLG*PRPRRR
Trigger: GCGACGACGTGGTCGTGGCCATCCTAGGAAAGAATG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCTTGCCTGGCTGGGCATaGAGGCTGACGGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSLPGWA*RLTGSP
Trigger: TGGGGAACCCGTCAGCCTCCATGCCCAGCCAGGCAA...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTGCCTGGCTGGGCATaGAGGCTGACGGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVLPGWA*RLTGSP
Trigger: TGGGGAACCCGTCAGCCTCCATGCCCAGCCAGGCAA...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGTTGCCTGGCTGGGCATaGAGGCTGACGGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQLPGWA*RLTGSP
Trigger: TGGGGAACCCGTCAGCCTCCATGCCCAGCCAGGCAA...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCCCCGCACGTCTGCACTaGACTTGCCTGGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSPARLH*TCLAGH
Trigger: ATGCCCAGCCAGGCAAGTCCAGTGCAGACGTGCGGG...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTAGCAGATCTGCCCGCTaGATCTTGTGCAGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPSRSAR*ILCRSQ
Trigger: CTGCGACCTGCACAAGATCCAGCGGGCAGATCTGCT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTAAACCTTGGTGGTCTTaGCTGCCAGGAGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPKPWWS*LPGACR
Trigger: CCGACAGGCTCCTGGCAGCCAAGACCACCAAGGTTT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTGGGCAGCCTGGGCCCTaGACTCGTCGTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPGQPGP*TRRLRG
Trigger: GCCTCGGAGACGACGAGTCCAGGGCCCAGGCTGCCC...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCTCACCCACGCCATCCTaGGTCACCTGGATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLSPTPS*VTWISS
Trigger: ACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGA...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCTGCATCTGGGTGCCCTaGAGCACAAGGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSCIWVP*STRSCP
Trigger: GGGGCAGGACCTTGTGCTCCAGGGCACCCAGATGCA...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583023.1
3UTR CAA 72 bp CCTCCACACCTGAGACTCTCCCACCCTGCACCAGGCTaGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PPHLRLSHPAPG*LFKWSPGGGWE
Trigger: TTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGGAGAGTCTCAGGTGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGCGCAGTTCTCCATCTaGGCATTGGCAATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLAQFSI*ALAIRN
Trigger: GTTCCTGATTGCCAATGCTCAGATGGAGAACTGCGC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCCCGCCTGGCCTGCCATaGGAGCCCTCGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIPPGLP*EPSEPR
Trigger: CCTGGGCTCCGAGGGCTCTCATGGCAGGCCAGGCGG...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTACTGTGGGATCTGGCTaGTGGTCCTGTACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSTVGSG*WSCTCP
Trigger: GGGGCAAGTACAGGACCATCAGCCAGATCCCACAGT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp GGCGCGATGATCTCAATCTCCGTGGTGGAGCTGGAGCGGTGCTTCTCCAAGTTGACTGTGGGATCTGGCTaGTGGTCCTGTACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GAMISISVVELERCFSKLTVGSG*WSCTCP
Trigger: GGGGCAAGTACAGGACCATCAGCCAGATCCCACAGT...CAACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGATTGAGATCATCGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCGCCGTGATTCGTCCTaGTCGCTGAGCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LNGALEEAGKSRELLHPRRRDSS*SLSRKA
Trigger: CGCCTTCCTGCTCAGCGATCAGGACGAATCACGGCG...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CTGCACTTGGCCAGGAGCTGGGCCAGGTCCTCGAAGTTGAGAATGAACATGATGTGCGGCGGGGGTGGCTaGCCACCTCATCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: LHLARSWARSSKLRMNMMCGGGG*PPHHWC
Trigger: ACACCAATGATGAGGTGGTCAGCCACCCCCGCCGCA...CATCATGTTCATTCTCAACTTCGAGGACCTGGCCCAGCTCCTGGCCAAGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCCTTGCCGGCGCCGCTaGAAGCTGGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPPCRRR*KLGSAA
Trigger: TGCAGCACTGCCCAGCTTTCAGCGGCGCCGGCAAGG...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCAATCTGGGTCTTCCTaGGGGCTTTGGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVQSGSS*GLWGLC
Trigger: GCACAGCCCCCAAAGCCCTCAGGAAGACCCAGATTG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGCTGCAAGATGCGGCTaGGGTCTGAGGACACGCGGG +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSAARCG*GLRTRG
Trigger: CCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGC...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCGAAGCCCACGCTGGTaGGGCTGCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSRSPRW*GCRCRP
Trigger: TGGCCTGCATCTGCAGCCTCACCAGCGTGGGCTTCG...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456941.6
CDS-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGGCGGGACACGGCGCTaGTTGGTGTGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFGGTRR*LVCWGL
Trigger: CAGGCCCCAACACACCAAGCAGCGCCGTGTCCCGCC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
CDS-3UTR GCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTAGAGGATGTCCACCTTaGACTCCTCAGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSRGCPP*TPQPPA
Trigger: TGCTGGGGGCTGAGGAGTGCAAGGTGGACATCCTCT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTACTTGCCCCTGCCTGTaGCTGGCCCTGGTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPTCPCL*LALVRL
Trigger: CAGGCGGACCAGGGCCAGGCACAGGCAGGGGCAAGT...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGTGGAGCTGGAGCGGTaGTTCTCCAAGTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLVELER*FSKLNS
Trigger: GGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCAC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp AGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGACTGCAGGTATAGCTaGAGGCCCCACGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: SRSSRAVFNSPIRVVVSSDCRYS*RPHAVI
Trigger: AATCACGGCGTGGGGCCTGCAGCTATACCTGCAGTC...CGATGAGACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGCGGTCCAGCTTCCGTaGTACGCGCACCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFAVQLP*YAHQPQ
Trigger: CTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGATGCAGGCCAGCCAGTaGGCTATGAGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSMQASQ*AMSAKV
Trigger: CACCTTCGCGCTCATAGCGCACTGGCTGGCCTGCAT...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGTGCCGTTGTAGCGCTTaGCAAGCTGCACACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQCRCSA*QAAHPG
Trigger: GCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCA...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCGAGGCTGGGTCGCTaGCGTTGTAGCGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVPRLGR*RCSACQ
Trigger: TTGGCAAGCGCTACAACGGCAGCGACCCAGCCTCGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCAAAGCTGGGCAGTGCTaGAGCAGTGCGCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVKAGQC*SSARCR
Trigger: CCTGCACCGCGCACTGCTGCAGCACTGCCCAGCTTT...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp AGGCATCCTGGGGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCCTGAAAGCTGGGCAGTaGTGCAGCAGTGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: RHPGGGVPVLWTTVIQVSLKAGQ*CSSARC
Trigger: GCACCGCGCACTGCTGCAGCACTGCCCAGCTTTCAG...GGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCCCAGGATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTAGCACGTCGCCGAGGTaGACCAGCGTGTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFSTSPR*TSVSPG
Trigger: GCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCT...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCAGATGCATCTGAGATaGTCAGGGGAGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLQMHLR*SGEGLH
Trigger: ATGCAGCCCCTCCCCTGAGCATCTCAGATGCATCTG...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCTTGGGGGCATTTCCTaGAGTAGCTCAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSLGGIS*SSSGQR
Trigger: CCTCTGGCCTGAGCTACTGCAGGAAATGCCCCCAAG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTGGCTTCTGGAGGAGCTaGAAGATGCGGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSGFWRS*KMRLRS
Trigger: AGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp AGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGGCTTCTGGAGGAGCTaGAAGATGCGGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SRSSRAVFNSPIRVVVSSGFWRS*KMRLRS
Trigger: AGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC...CGATGAGACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGGGGAGGAGTTCCTGTaGTTTGGACTACAGTCATCC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLGEEFL*FGLQSS
Trigger: GGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCAGGAACTTCCGACTTTaGCCCTCGAACTTGCGGATG +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLRNFRL*PSNLRM
Trigger: CATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTGGACACGGCGCTGCTTaGTGTGTTGGGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VSFFTHAILGHLDQQFVAGHGAA*CVGACE
Trigger: CTCACAGGCCCCAACACACCAAGCAGCGCCGTGTCC...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACCCAGGCAGCGGAAGCTaGAGGCATCCTTGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHPGSGS*RHPCGS
Trigger: ACTACCGCAAGGATGCCTCCAGCTTCCGCTGCCTGG...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGCCCCTGCCTGTGCCTaGCCCTGGTCCGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIAPACA*PWSAWP
Trigger: AGGCCAGGCGGACCAGGGCCAGGCACAGGCAGGGGC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCCCAGGGACAGGACCTaGGTGACCTTCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQPRDRT*VTFSVT
Trigger: CGTCACTGAGAAGGTCACCCAGGTCCTGTCCCTGGG...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCCAGGGACAGGACCTaGGTGACCTTCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVPRDRT*VTFSVT
Trigger: CGTCACTGAGAAGGTCACCCAGGTCCTGTCCCTGGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCTGGACTTGCCTGGCTaGGCATGGAGGCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVLDLPG*AWRLTG
Trigger: ACCCGTCAGCCTCCATGCCCAGCCAGGCAAGTCCAG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp AGGCATCCTGGGGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCCTGGACTTGCCTGGCTaGGCATGGAGGCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: RHPGGGVPVLWTTVIQVSLDLPG*AWRLTG
Trigger: ACCCGTCAGCCTCCATGCCCAGCCAGGCAAGTCCAG...GGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCCCAGGATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCCCGCACGTCTGCACTaGACTTGCCTGGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LNGALEEAGKSRELLHPRPARLH*TCLAGH
Trigger: ATGCCCAGCCAGGCAAGTCCAGTGCAGACGTGCGGG...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTAGCAGATCTGCCCGCTaGATCTTGTGCAGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSSRSAR*ILCRSQ
Trigger: CTGCGACCTGCACAAGATCCAGCGGGCAGATCTGCT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTAAACCTTGGTGGTCTTaGCTGCCAGGAGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSKPWWS*LPGACR
Trigger: CCGACAGGCTCCTGGCAGCCAAGACCACCAAGGTTT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCAGAAAGAAACCTTGGTaGTCTTGGCTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLRKKPW*SWLPGA
Trigger: GGCTCCTGGCAGCCAAGACCACCAAGGTTTCTTTCT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAACTGTTCATCTGGGCCTaGAGCTGCTCTAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKLFIWA*SCSSLE
Trigger: CTCCAGGCTAGAGCAGCTCCAGGCCCAGATGAACAG...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGGGCATGGGCTTCTaGAGGAGCTGCAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVWGMGF*RSCKMR
Trigger: CCGCATCTTGCAGCTCCTCCAGAAGCCCATGCCCCA...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCGTGGCCCTGGGGCATaGGCTTCTGGAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSRGPGA*ASGGAA
Trigger: TGCAGCTCCTCCAGAAGCCCATGCCCCAGGGCCACG...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCCTTCCAGAATGTAGCTaGCGTGGCCCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSLPECS*RGPGAW
Trigger: CCATGCCCCAGGGCCACGCCAGCTACATTCTGGAAG...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCAAGGCCAGGTCATTaGAGGCAGGGGCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSPRPGH*RQGLPE
Trigger: TTCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GGCGCGATGATCTCAATCTCCGTGGTGGAGCTGGAGCGGTGCTTCTCCAAGTTGCCAAGGCCAGGTCATTaGAGGCAGGGGCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GAMISISVVELERCFSKLPRPGH*RQGLPE
Trigger: TTCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGG...CAACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGATTGAGATCATCGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCAAGTCTCCATAGCTTaGGGTCTGTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPQVSIA*GLCRRQ
Trigger: CTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGGAAGTCCAGCTGCTTaGGAACAGAGCCAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLGSPAA*EQSQGV
Trigger: AACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTCTGAGCCATGTCTCTaGAAGTCCAGCTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLSEPCL*KSSCLG
Trigger: TCCCAAGCAGCTGGACTTCCAGAGACATGGCTCAGA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGATTCGTCCTGATCGCTaGGCAGGAAGGCGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQIRPDR*AGRRLS
Trigger: ACTCAGCCGCCTTCCTGCTCAGCGATCAGGACGAAT...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGAGCCAGTGCGGAAGACGCCGTGATTCGTCCTaGTCGCTGAGCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LSSIAQSGLWSHRSQCGRRRDSS*SLSRKA
Trigger: CGCCTTCCTGCTCAGCGATCAGGACGAATCACGGCG...TCTTCCGCACTGGCTCCGATGAGACCACAACCCTGATTGGGCTATTGAAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGGAGCCTCGGGAGATaGAGTAGAGGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSWSLGR*SRGWRA
Trigger: TGCTCTCCACCCTCTACTTCATCTCCCGAGGCTCCA...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTGGGAGGGGCTGCATCTaGCTGGTTGTCACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSGRGCI*LVVTEK
Trigger: TTTCTCAGTGACAACCAGTCAGATGCAGCCCCTCCC...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583465.1
CDS-3UTR TCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCAATCTGGGTCTTCCTaGGGGCTTTGGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVQSGSS*GLWGLC
Trigger: GCACAGCCCCCAAAGCCCTCAGGAAGACCCAGATTG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGCTGCAAGATGCGGCTaGGGTCTGAGGACACGCGGG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFAARCG*GLRTRG
Trigger: CCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGCAGGGACCACAGATaGGTCCTTGTACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKSRDHR*VLVLPG
Trigger: CCCTGGAAGTACAAGGACTCATCTGTGGTCCCTGCT...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTGCAAATCCAGGATCTaGGCCATGTCTCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLCKSRI*AMSLEV
Trigger: GACTTCCAGAGACATGGCTCAGATCCTGGATTTGCA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGGGCTGGGAAAAGTCGTaGGCTTCTTCACCCACGCCA +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQGWEKS*ASSPTP
Trigger: TGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCC...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCTCATGGGGAGACCCTaGCTGGTTGTCACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLLMGRP*LVVTEK
Trigger: TTTCTCAGTGACAACCAGTCAGGGTCTCCCCATGAG...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583023.1
CDS-3UTR GCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTGAGCGACGTGGCCCCTaGGGACCGGCATCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLERRGP*GPASFG
Trigger: GCCGAAAGATGCCGGTCCGCAGGGGCCACGTCGCTC...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCAGAGGATGTCCACCTTaGACTCCTCAGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVRGCPP*TPQPPA
Trigger: TGCTGGGGGCTGAGGAGTGCAAGGTGGACATCCTCT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTAGCTGGAGGCATCCTTaGGGTAGTAGAGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPSWRHP*GSRGCP
Trigger: TGGACATCCTCTACTACCGCAAGGATGCCTCCAGCT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
CDS-3UTR GCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTCTGGTCCGCCTGGCCTaGCATGAGAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLLVRLA*HESPRS
Trigger: GCTCCGAGGGCTCTCATGGCAGGCCAGGCGGACCAG...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAGTGGAGCTGGAGCGGTaGTTCTCCAAGTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKVELER*FSKLNS
Trigger: GGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCAC...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGGACTGCAGGTATAGCTaGAGGCCCCACGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSDCRYS*RPHAVI
Trigger: AATCACGGCGTGGGGCCTGCAGCTATACCTGCAGTC...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGACTGCAGGTATAGCTaGAGGCCCCACGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVDCRYS*RPHAVI
Trigger: AATCACGGCGTGGGGCCTGCAGCTATACCTGCAGTC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTTCTCATCGGAGCCAGTaGGGAAGATCAGGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSSHRSQ*GRSGGR
Trigger: TCGACCTCCTGATCTTCCGCACTGGCTCCGATGAGA...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTGTGGTAGCGCGCGGTaGCCGAGTACAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFCGSAR*PSTGAG
Trigger: TCCAGCGCCTGTACTCGGGCACCGCGCGCTACCACA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTTGTGGTAGCGCGCGGTaGCCGAGTACAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPCGSAR*PSTGAG
Trigger: TCCAGCGCCTGTACTCGGGCACCGCGCGCTACCACA...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGCTTGGGGGCATTTCCTaGAGTAGCTCAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSLGGIS*SSSGQR
Trigger: CCTCTGGCCTGAGCTACTGCAGGAAATGCCCCCAAG...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGGGGAGGAGTTCCTGTaGTTTGGACTACAGTCATCC +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPGEEFL*FGLQSS
Trigger: GGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTTCACCCAGGCTGGAGTaGAGTGGTGCGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPSPRLE*SGAASA
Trigger: AGCCGAGGCCGCACCACTGCACTCCAGCCTGGGTGA...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTACCCTGCACCAGGCTTaGTGTTTAAATGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPTLHQA*CLNGAL
Trigger: CAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTCCAGGCAGCGGAAGCTaGAGGCATCCTTGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: VSFFTHAILGHLDQQFVAPGSGS*RHPCGS
Trigger: ACTACCGCAAGGATGCCTCCAGCTTCCGCTGCCTGG...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTGGGACAACAGGCGCTaGGACAAGCTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSWDNRR*DKLRLL
Trigger: CAGCAGCCGCAGCTTGTCCCAGCGCCTGTTGTCCCA...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGGAGCCCAGGAAGCTCTaGGACAACAGGCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGEPRKL*DNRRWD
Trigger: GTCCCAGCGCCTGTTGTCCCAGAGCTTCCTGGGCTC...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGCCTGTGCCTGGCCCTaGTCCGCCTGGCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIACAWP*SAWPAM
Trigger: CATGGCAGGCCAGGCGGACCAGGGCCAGGCACAGGC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGGCCCCTGCCTGTGCCTaGCCCTGGTCCGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHEAPACA*PWSAWP
Trigger: AGGCCAGGCGGACCAGGGCCAGGCACAGGCAGGGGC...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGTTGAGCGTGAACTGTaGGATCTGGCTGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPVEREL*DLADGP
Trigger: AGGACCATCAGCCAGATCCCACAGTTCACGCTCAAC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGTTGAGCGTGAACTGTaGGATCTGGCTGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLVEREL*DLADGP
Trigger: AGGACCATCAGCCAGATCCCACAGTTCACGCTCAAC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACTCTCCGTGGTGGAGCTaGAGCGGTGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHSPWWS*SGASPS
Trigger: ACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGA...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCCAGGGACAGGACCTaGGTGACCTTCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVPRDRT*VTFSVT
Trigger: CGTCACTGAGAAGGTCACCCAGGTCCTGTCCCTGGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTAGACCTTCTCGGAGTTaGTGTTGGGCGAGACATTGC +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPRPSRS*CWARHC
Trigger: GCAATGTCTCGCCCAACACCAACTCCGAGAAGGTCT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GGCGCGATGATCTCAATCTCCGTGGTGGAGCTGGAGCGGTGCTTCTCCAAGTTGCATTCTTTCCTAGGATaGCCACGACCACGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: GAMISISVVELERCFSKLHSFLG*PRPRRR
Trigger: GCGACGACGTGGTCGTGGCCATCCTAGGAAAGAATG...CAACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGATTGAGATCATCGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCTGTTCATCTGGGCCTaGAGCTGCTCTAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVLFIWA*SCSSLE
Trigger: CTCCAGGCTAGAGCAGCTCCAGGCCCAGATGAACAG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGTCCAGCCTGTTCATCTaGGCCTGGAGCTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQSSLFI*AWSCSS
Trigger: GCTAGAGCAGCTCCAGGCCCAGATGAACAGGCTGGA...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCCAGCCTGTTCATCTaGGCCTGGAGCTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVSSLFI*AWSCSS
Trigger: GCTAGAGCAGCTCCAGGCCCAGATGAACAGGCTGGA...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCTGGGGCATGGGCTTCTaGAGGAGCTGCAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: LNGALEEAGKSRELLHPRWGMGF*RSCKMR
Trigger: CCGCATCTTGCAGCTCCTCCAGAAGCCCATGCCCCA...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACCCAAGGCCAGGTCATTaGAGGCAGGGGCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHPRPGH*RQGLPE
Trigger: TTCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGG...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGGGCAGCCTGGGCCCTaGACTCGTCGTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIGQPGP*TRRLRG
Trigger: GCCTCGGAGACGACGAGTCCAGGGCCCAGGCTGCCC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCAAGTCTCCATAGCTTaGGGTCTGTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSQVSIA*GLCRRQ
Trigger: CTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GGCTTCTGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCGGAGTTCCTGTGCTTTaGACTACAGTCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GFWRSCKMRLRSEDTRDSGVPVL*TTVIQV
Trigger: GACTTGGATGACTGTAGTCCAAAGCACAGGAACTCC...GGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTTGGAGGGTTCTGAGCTaGGAGGCTCAGAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSWRVLS*EAQSKV
Trigger: TACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTCCA...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTGGGGCCCCAGCTCATaGGGAGACCCTGACTGGTTG +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSWGPSS*GDPDWL
Trigger: CAACCAGTCAGGGTCTCCCCATGAGCTGGGGCCCCA...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000583023.1
3UTR CAA 72 bp GGCGCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTaGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCT +
Preference number: 4 (lower is better)
Translates to: GARHHAQLKEIP*PTFSPLMVSLS
Trigger: AGATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTGTGTGTTGGGGCCTGTaGGGAAGTCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPVCWGL*GSRRCR
Trigger: CCTGCACCTGCGACTTCCTCACAGGCCCCAACACAC...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCTGACTGGTTGTCACTaGGAAAGAAACCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLLTGCH*ERNLGG
Trigger: ACCACCAAGGTTTCTTTCTCAGTGACAACCAGTCAG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGAGGCCAGATGCATCTaGGATGCTCAGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFEARCI*DAQGRG
Trigger: GCCCCTCCCCTGAGCATCTCAGATGCATCTGGCCTC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCAGCAGGGACCACAGATaGGTCCTTGTACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVSRDHR*VLVLPG
Trigger: CCCTGGAAGTACAAGGACTCATCTGTGGTCCCTGCT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTGGTGCTGGAGGGTTCTaGGCTGGGAGGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPGAGGF*AGRLRA
Trigger: TGCTCTGAGCCTCCCAGCTCAGAACCCTCCAGCACC...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCTTGCTTCAGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVLASAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCTGAAGCAAG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTGGGACAAGCTGCGGCTaGTGCACTTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPGTSCG*CTWPGA
Trigger: AGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTCCC...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGTGGAGCTGGAGCGGTaGTTCTCCAAGTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVVELER*FSKLNS
Trigger: GGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCAC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTATGCAGGCCAGCCAGTaGGCTATGAGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSMQASQ*AMSAKV
Trigger: CACCTTCGCGCTCATAGCGCACTGGCTGGCCTGCAT...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCAGCACGTCGCCGAGGTaGACCAGCGTGTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFISTSPR*TSVSPG
Trigger: GCCTGGGGACACGCTGGTGCACCTCGGCGACGTGCT...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCAGAGCCCGCACGTCTaGACTGGACTTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPQSPHV*TGLAWL
Trigger: CAGCCAGGCAAGTCCAGTGCAGACGTGCGGGCTCTG...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCGGCTTCTGGAGGAGCTaGAAGATGCGGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LNGALEEAGKSRELLHPRGFWRS*KMRLRS
Trigger: AGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCATAGCTTGGGGTCTGTaGAGGAGGCAGAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSIAWGL*RRQKAL
Trigger: CAGGGCTTTCTGCCTCCTGCACAGACCCCAAGCTAT...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCATAGCTTGGGGTCTGTaGAGGAGGCAGAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVIAWGL*RRQKAL
Trigger: CAGGGCTTTCTGCCTCCTGCACAGACCCCAAGCTAT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAACCCTGCACCAGGCTTaGTGTTTAAATGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKTLHQA*CLNGAL
Trigger: CAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGT...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGAGCACAAGGTCCTaGCCCCATGGAGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVWSTRS*PHGVLA
Trigger: AGCCAGAACTCCATGGGGGCAGGACCTTGTGCTCCA...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583023.1
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTGGGGCTGCATCTGGGTaGCCTGGAGCACAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPGAASG*PGAQGP
Trigger: AGGACCTTGTGCTCCAGGGCACCCAGATGCAGCCCC...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583023.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTCTCCATCTGAGCATTaGCAATCAGGAACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLSPSEH*QSGTSD
Trigger: GTCGGAAGTTCCTGATTGCCAATGCTCAGATGGAGA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGGACACGGCGCTGCTTaGTGTGTTGGGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFGHGAA*CVGACE
Trigger: CTCACAGGCCCCAACACACCAAGCAGCGCCGTGTCC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
CDS-3UTR CCA 90 bp TTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTCTGTGCAGGAGGCAGAATGGGACAACAGGCGCTaGGACAAGCTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LDYSHPSLHSLGSVQEAEWDNRR*DKLRLL
Trigger: CAGCAGCCGCAGCTTGTCCCAGCGCCTGTTGTCCCA...TTCTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGAGCCCAGGAAGCTCTaGGACAACAGGCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFEPRKL*DNRRWD
Trigger: GTCCCAGCGCCTGTTGTCCCAGAGCTTCCTGGGCTC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCTCCGTGGTGGAGCTaGAGCGGTGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVSPWWS*SGASPS
Trigger: ACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGA...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCATTCTTTCCTAGGATaGCCACGACCACGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQHSFLG*PRPRRR
Trigger: GCGACGACGTGGTCGTGGCCATCCTAGGAAAGAATG...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCCCGCACGTCTGCACTaGACTTGCCTGGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFPARLH*TCLAGH
Trigger: ATGCCCAGCCAGGCAAGTCCAGTGCAGACGTGCGGG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCAGCAGATCTGCCCGCTaGATCTTGTGCAGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LNGALEEAGKSRELLHPRSRSAR*ILCRSQ
Trigger: CTGCGACCTGCACAAGATCCAGCGGGCAGATCTGCT...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTAGAAAGAAACCTTGGTaGTCTTGGCTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSRKKPW*SWLPGA
Trigger: GGCTCCTGGCAGCCAAGACCACCAAGGTTTCTTTCT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCTGTTCATCTGGGCCTaGAGCTGCTCTAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVLFIWA*SCSSLE
Trigger: CTCCAGGCTAGAGCAGCTCCAGGCCCAGATGAACAG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCTCCAGCCTGTTCATCTaGGCCTGGAGCTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LNGALEEAGKSRELLHPRSSLFI*AWSCSS
Trigger: GCTAGAGCAGCTCCAGGCCCAGATGAACAGGCTGGA...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCAAGTCTCCATAGCTTaGGGTCTGTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVQVSIA*GLCRRQ
Trigger: CTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTGGAAGTCCAGCTGCTTaGGAACAGAGCCAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSGSPAA*EQSQGV
Trigger: AACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCC...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTTCTGAGCCATGTCTCTaGAAGTCCAGCTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSSEPCL*KSSCLG
Trigger: TCCCAAGCAGCTGGACTTCCAGAGACATGGCTCAGA...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTATCTTGGAGTTCAGTaGCCCCAACTCCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLYLGVQ*PQLPAN
Trigger: ATTTGCAGGGAGTTGGGGCCACTGAACTCCAAGATA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTAGCCTCCCCAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSSLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTGGGGAGGCT...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGGGCTTGCTGTTTAAATaGAGCCCTGGAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQGLLFK*SPGGGW
Trigger: CCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCC...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGTCAGGAGCAGAGGGCTaGAGGACTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQSGAEG*RTVLTC
Trigger: ACATGTCAGGACAGTCCTCCAGCCCTCTGCTCCTGA...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR CAA 72 bp CCAGGTGAGGCATCCTGGGGGAGGAGTTCCTGTGCTTaGGACTACAGTCATCCAAGTCTCCATAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PGEASWGRSSCA*DYSHPSLHSLG
Trigger: CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCCCAGGATGCCTCACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGGCGCAGTTCTCCATCTaGGCATTGGCAATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQAQFSI*ALAIRN
Trigger: GTTCCTGATTGCCAATGCTCAGATGGAGAACTGCGC...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTGTGTGTTGGGGCCTGTaGGGAAGTCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLVCWGL*GSRRCR
Trigger: CCTGCACCTGCGACTTCCTCACAGGCCCCAACACAC...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGCAGGCCCCACGCCGTaGTTCGTCCTGATCGCTGAG +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIAGPTP*FVLIAE
Trigger: CTCAGCGATCAGGACGAATCACGGCGTGGGGCCTGC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTTGCGGCGGGGGTGGCTaGCCACCTCATCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLCGGGG*PPHHWC
Trigger: ACACCAATGATGAGGTGGTCAGCCACCCCCGCCGCA...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCTGACTGGTTGTCACTaGGAAAGAAACCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPLTGCH*ERNLGG
Trigger: ACCACCAAGGTTTCTTTCTCAGTGACAACCAGTCAG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CTGCACTTGGCCAGGAGCTGGGCCAGGTCCTCGAAGTTGAGAATGAACATGATGGGGAGGGGCTGCATCTaGCTGGTTGTCACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LHLARSWARSSKLRMNMMGRGCI*LVVTEK
Trigger: TTTCTCAGTGACAACCAGTCAGATGCAGCCCCTCCC...CATCATGTTCATTCTCAACTTCGAGGACCTGGCCCAGCTCCTGGCCAAGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCAGCAGGGACCACAGATaGGTCCTTGTACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVSRDHR*VLVLPG
Trigger: CCCTGGAAGTACAAGGACTCATCTGTGGTCCCTGCT...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTTGCAAATCCAGGATCTaGGCCATGTCTCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSCKSRI*AMSLEV
Trigger: GACTTCCAGAGACATGGCTCAGATCCTGGATTTGCA...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGCTGGGAAAAGTCGTaGGCTTCTTCACCCACGCCA +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSGWEKS*ASSPTP
Trigger: TGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCC...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCGCTGGAGGACTGTCCTaGCATGTCTGCCACAGAACA +
Preference number: 4 (lower is better)
Translates to: LNGALEEAGKSRELLHPRAGGLS*HVCHRT
Trigger: TGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGC...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGGAGCGACGTGGCCCCTaGGGACCGGCATCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHEERRGP*GPASFG
Trigger: GCCGAAAGATGCCGGTCCGCAGGGGCCACGTCGCTC...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCAGCTGGAGGCATCCTTaGGGTAGTAGAGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVSWRHP*GSRGCP
Trigger: TGGACATCCTCTACTACCGCAAGGATGCCTCCAGCT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCGTGGAGCTGGAGCGGTaGTTCTCCAAGTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVVELER*FSKLNS
Trigger: GGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCAC...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCTCATCGGAGCCAGTaGGGAAGATCAGGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVSHRSQ*GRSGGR
Trigger: TCGACCTCCTGATCTTCCGCACTGGCTCCGATGAGA...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGGCGGTCCAGCTTCCGTaGTACGCGCACCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHEAVQLP*YAHQPQ
Trigger: CTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp TTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTCTGTGCAGGAGGCAGAAATGCAGGCCAGCCAGTaGGCTATGAGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LDYSHPSLHSLGSVQEAEMQASQ*AMSAKV
Trigger: CACCTTCGCGCTCATAGCGCACTGGCTGGCCTGCAT...TTCTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTCAGAGCCCGCACGTCTaGACTGGACTTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLQSPHV*TGLAWL
Trigger: CAGCCAGGCAAGTCCAGTGCAGACGTGCGGGCTCTG...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCATAGCTTGGGGTCTGTaGAGGAGGCAGAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LNGALEEAGKSRELLHPRIAWGL*RRQKAL
Trigger: CAGGGCTTTCTGCCTCCTGCACAGACCCCAAGCTAT...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGGGGGAGGAGTTCCTGTaGTTTGGACTACAGTCATCC +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQGEEFL*FGLQSS
Trigger: GGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCC...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCAGAGTTTTGTCCGTTaGCACAGCCAGGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVQSFVR*HSQVRH
Trigger: ATGCCTCACCTGGCTGTGGCAACGGACAAAACTCTG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR GCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCCAGAGTTTTGTCCGTTaGCACAGCCAGGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSQSFVR*HSQVRH
Trigger: ATGCCTCACCTGGCTGTGGCAACGGACAAAACTCTG...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTCACCCAGGCTGGAGTaGAGTGGTGCGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFISPRLE*SGAASA
Trigger: AGCCGAGGCCGCACCACTGCACTCCAGCCTGGGTGA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTAACCTCTTTCTTCACTaGCCCCTCAATCCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPNLFLH*PLNPVS
Trigger: GCTTACAGGATTGAGGGGGCAGTGAAGAAAGAGGTT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAATGTGTGACACTCCACTaGCCTCAAGAGACCCAATGT +
Preference number: 4 (lower is better)
Translates to: PTLHQACCLNGALEEAGKCVTLH*PQETQC
Trigger: ACATTGGGTCTCTTGAGGGCAGTGGAGTGTCACACA...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCTCTCCATCTGAGCATTaGCAATCAGGAACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLSPSEH*QSGTSD
Trigger: GTCGGAAGTTCCTGATTGCCAATGCTCAGATGGAGA...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTGCGGCTGCTGCACTTaGCCAGGAGCTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFICGCCT*PGAGPG
Trigger: ACCTGGCCCAGCTCCTGGCCAAGTGCAGCAGCCGCA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGGTTGAGCGTGAACTGTaGGATCTGGCTGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSVEREL*DLADGP
Trigger: AGGACCATCAGCCAGATCCCACAGTTCACGCTCAAC...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGTTGAGCGTGAACTGTaGGATCTGGCTGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVVEREL*DLADGP
Trigger: AGGACCATCAGCCAGATCCCACAGTTCACGCTCAAC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACAGACCTTCTCGGAGTTaGTGTTGGGCGAGACATTGC +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHRPSRS*CWARHC
Trigger: GCAATGTCTCGCCCAACACCAACTCCGAGAAGGTCT...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCAGACCTTCTCGGAGTTaGTGTTGGGCGAGACATTGC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVRPSRS*CWARHC
Trigger: GCAATGTCTCGCCCAACACCAACTCCGAGAAGGTCT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCATTCTTTCCTAGGATaGCCACGACCACGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVHSFLG*PRPRRR
Trigger: GCGACGACGTGGTCGTGGCCATCCTAGGAAAGAATG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTCCAGCCTGTTCATCTaGGCCTGGAGCTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSSSLFI*AWSCSS
Trigger: GCTAGAGCAGCTCCAGGCCCAGATGAACAGGCTGGA...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTGGGGCATGGGCTTCTaGAGGAGCTGCAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFWGMGF*RSCKMR
Trigger: CCGCATCTTGCAGCTCCTCCAGAAGCCCATGCCCCA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTTGGGGCATGGGCTTCTaGAGGAGCTGCAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPWGMGF*RSCKMR
Trigger: CCGCATCTTGCAGCTCCTCCAGAAGCCCATGCCCCA...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCTTCCAGAATGTAGCTaGCGTGGCCCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFLPECS*RGPGAW
Trigger: CCATGCCCCAGGGCCACGCCAGCTACATTCTGGAAG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTTATCTTGGAGTTCAGTaGCCCCAACTCCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPYLGVQ*PQLPAN
Trigger: ATTTGCAGGGAGTTGGGGCCACTGAACTCCAAGATA...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTTaGAGTTCAGTGGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLMVSLS*SSVAPT
Trigger: AGTTGGGGCCACTGAACTCCAAGATAAAGACACCAT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
3UTR CAA 72 bp CTGGAGCGGTGCTTCTCCAAGTTGAACTCCACGAAGTaGAGCGTGAACTGTGGGATCTGGCTGATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LERCFSKLNSTK*SVNCGIWLMVL
Trigger: CAGGACCATCAGCCAGATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCGCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
3UTR CAA 72 bp ATCTCCGTGGTGGAGCTGGAGCGGTGCTTCTCCAAGTaGAACTCCACGAAGTTGAGCGTGAACTGTGGGATC +
Preference number: 4 (lower is better)
Translates to: ISVVELERCFSK*NSTKLSVNCGI
Trigger: GATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTGCGCAGTTCTCCATCTaGGCATTGGCAATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VSFFTHAILGHLDQQFVAAQFSI*ALAIRN
Trigger: GTTCCTGATTGCCAATGCTCAGATGGAGAACTGCGC...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATTCGTCCTGATCGCTaGGCAGGAAGGCGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFIRPDR*AGRRLS
Trigger: ACTCAGCCGCCTTCCTGCTCAGCGATCAGGACGAAT...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCCGCCGTGATTCGTCCTaGTCGCTGAGCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIRRDSS*SLSRKA
Trigger: CGCCTTCCTGCTCAGCGATCAGGACGAATCACGGCG...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCTCATCATTGGTGTTaGCATAGGTGGTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVPHHWC*HRWCGS
Trigger: ACTTCCGCACCACCTATGTCAACACCAATGATGAGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR TCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTGCGGCGGGGGTGGCTaGCCACCTCATCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFICGGGG*PPHHWC
Trigger: ACACCAATGATGAGGTGGTCAGCCACCCCCGCCGCA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTGGAGCCTCGGGAGATaGAGTAGAGGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFWSLGR*SRGWRA
Trigger: TGCTCTCCACCCTCTACTTCATCTCCCGAGGCTCCA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGAGGCCAGATGCATCTaGGATGCTCAGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIEARCI*DAQGRG
Trigger: GCCCCTCCCCTGAGCATCTCAGATGCATCTGGCCTC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTCAATCTGGGTCTTCCTaGGGGCTTTGGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLQSGSS*GLWGLC
Trigger: GCACAGCCCCCAAAGCCCTCAGGAAGACCCAGATTG...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTAGCAGGGACCACAGATaGGTCCTTGTACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSSRDHR*VLVLPG
Trigger: CCCTGGAAGTACAAGGACTCATCTGTGGTCCCTGCT...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGTGCAAATCCAGGATCTaGGCCATGTCTCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQCKSRI*AMSLEV
Trigger: GACTTCCAGAGACATGGCTCAGATCCTGGATTTGCA...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTACTTTATTAGCTGTGTaGCACTCCACTGCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSTLLAV*HSTALK
Trigger: CTTGAGGGCAGTGGAGTGTCACACAGCTAATAAAGT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTAGAGGATGTCCACCTTaGACTCCTCAGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPRGCPP*TPQPPA
Trigger: TGCTGGGGGCTGAGGAGTGCAAGGTGGACATCCTCT...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGGGACAAGCTGCGGCTaGTGCACTTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIGTSCG*CTWPGA
Trigger: AGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTCCC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGAGCCAGTGCGGAAGAGTGGAGCTGGAGCGGTaGTTCTCCAAGTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: LSSIAQSGLWSHRSQCGRVELER*FSKLNS
Trigger: GGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCAC...TCTTCCGCACTGGCTCCGATGAGACCACAACCCTGATTGGGCTATTGAAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGACTGCAGGTATAGCTaGAGGCCCCACGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFDCRYS*RPHAVI
Trigger: AATCACGGCGTGGGGCCTGCAGCTATACCTGCAGTC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCCTGAAAGCTGGGCAGTaGTGCAGCAGTGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFILKAGQ*CSSARC
Trigger: GCACCGCGCACTGCTGCAGCACTGCCCAGCTTTCAG...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCAGATGCATCTGAGATaGTCAGGGGAGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSQMHLR*SGEGLH
Trigger: ATGCAGCCCCTCCCCTGAGCATCTCAGATGCATCTG...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp CTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGAGCCAGTGCGGAAGACAGATGCATCTGAGATaGTCAGGGGAGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LSSIAQSGLWSHRSQCGRQMHLR*SGEGLH
Trigger: ATGCAGCCCCTCCCCTGAGCATCTCAGATGCATCTG...TCTTCCGCACTGGCTCCGATGAGACCACAACCCTGATTGGGCTATTGAAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCTTGGGGGCATTTCCTaGAGTAGCTCAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFLGGIS*SSSGQR
Trigger: CCTCTGGCCTGAGCTACTGCAGGAAATGCCCCCAAG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp TTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTCTGTGCAGGAGGCAGAACTTGGGGGCATTTCCTaGAGTAGCTCAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LDYSHPSLHSLGSVQEAELGGIS*SSSGQR
Trigger: CCTCTGGCCTGAGCTACTGCAGGAAATGCCCCCAAG...TTCTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR GCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGGGCTTTGGGGGCTGTaGCTTGGGGGCATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIGLWGL*LGGISC
Trigger: GCAGGAAATGCCCCCAAGGCACAGCCCCCAAAGCCC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGATAGCTTGGGGTCTGTaGAGGAGGCAGAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGIAWGL*RRQKAL
Trigger: CAGGGCTTTCTGCCTCCTGCACAGACCCCAAGCTAT...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCAGGAACTTCCGACTTTaGCCCTCGAACTTGCGGATG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVRNFRL*PSNLRM
Trigger: CATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCT...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGTGCGGCTGCTGCACTTaGCCAGGAGCTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHECGCCT*PGAGPG
Trigger: ACCTGGCCCAGCTCCTGGCCAAGTGCAGCAGCCGCA...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTGGGACAACAGGCGCTaGGACAAGCTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIWDNRR*DKLRLL
Trigger: CAGCAGCCGCAGCTTGTCCCAGCGCCTGTTGTCCCA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGTGAACTGTGGGATCTaGCTGATGGTCCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVVNCGI*LMVLYL
Trigger: CAAGTACAGGACCATCAGCCAGATCCCACAGTTCAC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGGTGAACTGTGGGATCTaGCTGATGGTCCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSVNCGI*LMVLYL
Trigger: CAAGTACAGGACCATCAGCCAGATCCCACAGTTCAC...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTTGCCTGGCTGGGCATaGAGGCTGACGGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFILPGWA*RLTGSP
Trigger: TGGGGAACCCGTCAGCCTCCATGCCCAGCCAGGCAA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTAGCAGATCTGCCCGCTaGATCTTGTGCAGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFSRSAR*ILCRSQ
Trigger: CTGCGACCTGCACAAGATCCAGCGGGCAGATCTGCT...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTAAACCTTGGTGGTCTTaGCTGCCAGGAGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFKPWWS*LPGACR
Trigger: CCGACAGGCTCCTGGCAGCCAAGACCACCAAGGTTT...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTCTTCCAGAATGTAGCTaGCGTGGCCCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLLPECS*RGPGAW
Trigger: CCATGCCCCAGGGCCACGCCAGCTACATTCTGGAAG...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCCAAGGCCAGGTCATTaGAGGCAGGGGCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFPRPGH*RQGLPE
Trigger: TTCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTTCTGAGCCATGTCTCTaGAAGTCCAGCTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: VSFFTHAILGHLDQQFVASEPCL*KSSCLG
Trigger: TCCCAAGCAGCTGGACTTCCAGAGACATGGCTCAGA...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTTATCTTGGAGTTCAGTaGCCCCAACTCCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSYLGVQ*PQLPAN
Trigger: ATTTGCAGGGAGTTGGGGCCACTGAACTCCAAGATA...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGCTTGCTGTTTAAATaGAGCCCTGGAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSGLLFK*SPGGGW
Trigger: CCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCC...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
3UTR CAA 72 bp CTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTaGGAGTTCAGTGGCCCCAACTCCCTGCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: LAHLQSPHGVFI*EFSGPNSLQIQ
Trigger: CTGGATTTGCAGGGAGTTGGGGCCACTGAACTCCAAGATAAAGACACCATGAGGGGACTGAAGGTGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCTCATCATTGGTGTTaGCATAGGTGGTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVPHHWC*HRWCGS
Trigger: ACTTCCGCACCACCTATGTCAACACCAATGATGAGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGCTGACTGGTTGTCACTaGGAAAGAAACCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSLTGCH*ERNLGG
Trigger: ACCACCAAGGTTTCTTTCTCAGTGACAACCAGTCAG...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTGCTGGAGGACTGTCCTaGCATGTCTGCCACAGAACA +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPAGGLS*HVCHRT
Trigger: TGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGC...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTCTCATCGGAGCCAGTaGGGAAGATCAGGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFSHRSQ*GRSGGR
Trigger: TCGACCTCCTGATCTTCCGCACTGGCTCCGATGAGA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTTCTCATCGGAGCCAGTaGGGAAGATCAGGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPSHRSQ*GRSGGR
Trigger: TCGACCTCCTGATCTTCCGCACTGGCTCCGATGAGA...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATAGCTTGGGGTCTGTaGAGGAGGCAGAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFIAWGL*RRQKAL
Trigger: CAGGGCTTTCTGCCTCCTGCACAGACCCCAAGCTAT...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGGGAGGAGTTCCTGTaGTTTGGACTACAGTCATCC +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSGEEFL*FGLQSS
Trigger: GGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCC...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGCAGAGTTTTGTCCGTTaGCACAGCCAGGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGQSFVR*HSQVRH
Trigger: ATGCCTCACCTGGCTGTGGCAACGGACAAAACTCTG...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTGTGAACTGTGGGATCTaGCTGATGGTCCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: VSFFTHAILGHLDQQFVAVNCGI*LMVLYL
Trigger: CAAGTACAGGACCATCAGCCAGATCCCACAGTTCAC...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCGTGAACTGTGGGATCTaGCTGATGGTCCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVVNCGI*LMVLYL
Trigger: CAAGTACAGGACCATCAGCCAGATCCCACAGTTCAC...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGAGCCAGTGCGGAAGAGTTGAGCGTGAACTGTaGGATCTGGCTGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: LSSIAQSGLWSHRSQCGRVEREL*DLADGP
Trigger: AGGACCATCAGCCAGATCCCACAGTTCACGCTCAAC...TCTTCCGCACTGGCTCCGATGAGACCACAACCCTGATTGGGCTATTGAAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCATTCTTTCCTAGGATaGCCACGACCACGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFHSFLG*PRPRRR
Trigger: GCGACGACGTGGTCGTGGCCATCCTAGGAAAGAATG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCAAGTCTCCATAGCTTaGGGTCTGTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFQVSIA*GLCRRQ
Trigger: CTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCGGAGTTCCTGTGCTTTaGACTACAGTCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSGVPVL*TTVIQV
Trigger: GACTTGGATGACTGTAGTCCAAAGCACAGGAACTCC...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGGAGTTCCTGTGCTTTaGACTACAGTCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVGVPVL*TTVIQV
Trigger: GACTTGGATGACTGTAGTCCAAAGCACAGGAACTCC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGAAGTCCAGCTGCTTaGGAACAGAGCCAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSGSPAA*EQSQGV
Trigger: AACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCC...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACTATCTTGGAGTTCAGTaGCCCCAACTCCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHYLGVQ*PQLPAN
Trigger: ATTTGCAGGGAGTTGGGGCCACTGAACTCCAAGATA...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTATGGTGTCTTTATCTTaGAGTTCAGTGGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSMVSLS*SSVAPT
Trigger: AGTTGGGGCCACTGAACTCCAAGATAAAGACACCAT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCAGCCTCCCCAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFISLPSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTGGGGAGGCT...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTTGGAGGGTTCTGAGCTaGGAGGCTCAGAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPWRVLS*EAQSKV
Trigger: TACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTCCA...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCTGGGGAGACCCTGACTaGTTGTCACTGAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GLEDCPDMSATEHTSISSWGDPD*LSLRKK
Trigger: TTTCTTTCTCAGTGACAACCAGTCAGGGTCTCCCCA...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583023.1
CDS-3UTR TCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGCGCAGTTCTCCATCTaGGCATTGGCAATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFAQFSI*ALAIRN
Trigger: GTTCCTGATTGCCAATGCTCAGATGGAGAACTGCGC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCATGAACCGCCTGGCCTGCCATaGGAGCCCTCGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSQYKTTHKISRVRPEHEPPGLP*EPSEPR
Trigger: CCTGGGCTCCGAGGGCTCTCATGGCAGGCCAGGCGG...TTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR TCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCCTCATCATTGGTGTTaGCATAGGTGGTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSPHHWC*HRWCGS
Trigger: ACTTCCGCACCACCTATGTCAACACCAATGATGAGG...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGCCTCATCATTGGTGTTaGCATAGGTGGTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGPHHWC*HRWCGS
Trigger: ACTTCCGCACCACCTATGTCAACACCAATGATGAGG...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTGGAGCCTCGGGAGATaGAGTAGAGGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIWSLGR*SRGWRA
Trigger: TGCTCTCCACCCTCTACTTCATCTCCCGAGGCTCCA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp CTGCACTTGGCCAGGAGCTGGGCCAGGTCCTCGAAGTTGAGAATGAACATGATGCTGACTGGTTGTCACTaGGAAAGAAACCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LHLARSWARSSKLRMNMMLTGCH*ERNLGG
Trigger: ACCACCAAGGTTTCTTTCTCAGTGACAACCAGTCAG...CATCATGTTCATTCTCAACTTCGAGGACCTGGCCCAGCTCCTGGCCAAGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR TCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCACTTTATTAGCTGTGTaGCACTCCACTGCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVTLLAV*HSTALK
Trigger: CTTGAGGGCAGTGGAGTGTCACACAGCTAATAAAGT...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTAGCTGGAGGCATCCTTaGGGTAGTAGAGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPSWRHP*GSRGCP
Trigger: TGGACATCCTCTACTACCGCAAGGATGCCTCCAGCT...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGTGCCGTTGTAGCGCTTaGCAAGCTGCACACCCAGGC +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHECRCSA*QAAHPG
Trigger: GCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCA...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCAGAGTTTTGTCCGTTaGCACAGCCAGGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPQSFVR*HSQVRH
Trigger: ATGCCTCACCTGGCTGTGGCAACGGACAAAACTCTG...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTTTCATGCCATTCTCCTaGCTCAGCCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLFMPFS*LSLPSS
Trigger: GCTACTGGGGAGGCTGAGGCAGGAGAATGGCATGAA...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTAACCTCTTTCTTCACTaGCCCCTCAATCCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: VSFFTHAILGHLDQQFVANLFLH*PLNPVS
Trigger: GCTTACAGGATTGAGGGGGCAGTGAAGAAAGAGGTT...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTAGGAACTTCCGACTTTaGCCCTCGAACTTGCGGATG +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFRNFRL*PSNLRM
Trigger: CATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCT...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCTCCATCTGAGCATTaGCAATCAGGAACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVSPSEH*QSGTSD
Trigger: GTCGGAAGTTCCTGATTGCCAATGCTCAGATGGAGA...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTAGACCTTCTCGGAGTTaGTGTTGGGCGAGACATTGC +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFRPSRS*CWARHC
Trigger: GCAATGTCTCGCCCAACACCAACTCCGAGAAGGTCT...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTCTGAGCCATGTCTCTaGAAGTCCAGCTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFSEPCL*KSSCLG
Trigger: TCCCAAGCAGCTGGACTTCCAGAGACATGGCTCAGA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGATGGTGTCTTTATCTTaGAGTTCAGTGGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQMVSLS*SSVAPT
Trigger: AGTTGGGGCCACTGAACTCCAAGATAAAGACACCAT...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTTCAGGAGCAGAGGGCTaGAGGACTGTCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLSGAEG*RTVLTC
Trigger: ACATGTCAGGACAGTCCTCCAGCCCTCTGCTCCTGA...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGACTGTGGGATCTGGCTaGTGGTCCTGTACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHETVGSG*WSCTCP
Trigger: GGGGCAAGTACAGGACCATCAGCCAGATCCCACAGT...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR TCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTCTGACTGGTTGTCACTaGGAAAGAAACCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSLTGCH*ERNLGG
Trigger: ACCACCAAGGTTTCTTTCTCAGTGACAACCAGTCAG...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCAGCAGGGACCACAGATaGGTCCTTGTACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFISRDHR*VLVLPG
Trigger: CCCTGGAAGTACAAGGACTCATCTGTGGTCCCTGCT...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTGGCGGGACACGGCGCTaGTTGGTGTGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NSLCCTLRISVLHELLLCGGTRR*LVCWGL
Trigger: CAGGCCCCAACACACCAAGCAGCGCCGTGTCCCGCC...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTAGCTGGAGGCATCCTTaGGGTAGTAGAGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLSWRHP*GSRGCP
Trigger: TGGACATCCTCTACTACCGCAAGGATGCCTCCAGCT...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTACTTGCCCCTGCCTGTaGCTGGCCCTGGTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: NSLCCTLRISVLHELLLCTCPCL*LALVRL
Trigger: CAGGCGGACCAGGGCCAGGCACAGGCAGGGGCAAGT...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCCAGATGCATCTGAGATaGTCAGGGGAGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIQMHLR*SGEGLH
Trigger: ATGCAGCCCCTCCCCTGAGCATCTCAGATGCATCTG...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTTCATGCCATTCTCCTaGCTCAGCCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIFMPFS*LSLPSS
Trigger: GCTACTGGGGAGGCTGAGGCAGGAGAATGGCATGAA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTGTGTGACACTCCACTaGCCTCAAGAGACCCAATGT +
Preference number: 4 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFCVTLH*PQETQC
Trigger: ACATTGGGTCTCTTGAGGGCAGTGGAGTGTCACACA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGTCTCCGTGGTGGAGCTaGAGCGGTGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHESPWWS*SGASPS
Trigger: ACTTGGAGAAGCACCGCTCCAGCTCCACCACGGAGA...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTAGAAAGAAACCTTGGTaGTCTTGGCTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLRKKPW*SWLPGA
Trigger: GGCTCCTGGCAGCCAAGACCACCAAGGTTTCTTTCT...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCCAAGTCTCCATAGCTTaGGGTCTGTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIQVSIA*GLCRRQ
Trigger: CTGCCTCCTGCACAGACCCCAAGCTATGGAGACTTG...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTGCAGGCCCCACGCCGTaGTTCGTCCTGATCGCTGAG +
Preference number: 4 (lower is better)
Translates to: NSLCCTLRISVLHELLLCAGPTP*FVLIAE
Trigger: CTCAGCGATCAGGACGAATCACGGCGTGGGGCCTGC...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp CTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCATGAACTGGTCCGCCTGGCCTaGCATGAGAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LSQYKTTHKISRVRPEHELVRLA*HESPRS
Trigger: GCTCCGAGGGCTCTCATGGCAGGCCAGGCGGACCAG...TTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGTCTCATCGGAGCCAGTaGGGAAGATCAGGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHESHRSQ*GRSGGR
Trigger: TCGACCTCCTGATCTTCCGCACTGGCTCCGATGAGA...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGGGGAGGAGTTCCTGTaGTTTGGACTACAGTCATCC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIGEEFL*FGLQSS
Trigger: GGATGACTGTAGTCCAAAGCACAGGAACTCCTCCCC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR GCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCCAGAGTTTTGTCCGTTaGCACAGCCAGGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIQSFVR*HSQVRH
Trigger: ATGCCTCACCTGGCTGTGGCAACGGACAAAACTCTG...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCAGGAACTTCCGACTTTaGCCCTCGAACTTGCGGATG +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIRNFRL*PSNLRM
Trigger: CATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCT...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTTCTCCATCTGAGCATTaGCAATCAGGAACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPSPSEH*QSGTSD
Trigger: GTCGGAAGTTCCTGATTGCCAATGCTCAGATGGAGA...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CCA 90 bp CTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCATGAATGGCCCTGGTCCGCCTaGCCTGCCATGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LSQYKTTHKISRVRPEHEWPWSA*PAMRAL
Trigger: GAGGGCTCTCATGGCAGGCCAGGCGGACCAGGGCCA...TTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGGCCTGTGCCTGGCCCTaGTCCGCCTGGCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEACAWP*SAWPAM
Trigger: CATGGCAGGCCAGGCGGACCAGGGCCAGGCACAGGC...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCGAGGGGCCCGAGGCTaGGTCGCTGCCGTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPERGARG*VAAVVA
Trigger: CGCTACAACGGCAGCGACCCAGCCTCGGGCCCCTCG...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCAGACCTTCTCGGAGTTaGTGTTGGGCGAGACATTGC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIRPSRS*CWARHC
Trigger: GCAATGTCTCGCCCAACACCAACTCCGAGAAGGTCT...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCAGAAAGAAACCTTGGTaGTCTTGGCTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIRKKPW*SWLPGA
Trigger: GGCTCCTGGCAGCCAAGACCACCAAGGTTTCTTTCT...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGGAAGTCCAGCTGCTTaGGAACAGAGCCAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIGSPAA*EQSQGV
Trigger: AACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTATGGTGTCTTTATCTTaGAGTTCAGTGGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSMVSLS*SSVAPT
Trigger: AGTTGGGGCCACTGAACTCCAAGATAAAGACACCAT...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR TCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGGCGCAGTTCTCCATCTaGGCATTGGCAATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHEAQFSI*ALAIRN
Trigger: GTTCCTGATTGCCAATGCTCAGATGGAGAACTGCGC...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR TCA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTCGCCGTGATTCGTCCTaGTCGCTGAGCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: NSLCCTLRISVLHELLLCRRDSS*SLSRKA
Trigger: CGCCTTCCTGCTCAGCGATCAGGACGAATCACGGCG...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGAGCTGGAGGCATCCTTaGGGTAGTAGAGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHESWRHP*GSRGCP
Trigger: TGGACATCCTCTACTACCGCAAGGATGCCTCCAGCT...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGAGGAACTTCCGACTTTaGCCCTCGAACTTGCGGATG +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHERNFRL*PSNLRM
Trigger: CATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCT...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGAGACCTTCTCGGAGTTaGTGTTGGGCGAGACATTGC +
Preference number: 4 (lower is better)
Translates to: THKISRVRPEHEVRPWHERPSRS*CWARHC
Trigger: GCAATGTCTCGCCCAACACCAACTCCGAGAAGGTCT...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTGGAGTTCCTGTGCTTTaGACTACAGTCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLGVPVL*TTVIQV
Trigger: GACTTGGATGACTGTAGTCCAAAGCACAGGAACTCC...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR GCA 90 bp CTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCATGAACCGAGGCTGGGTCGCTaGCGTTGTAGCGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LSQYKTTHKISRVRPEHEPRLGR*RCSACQ
Trigger: TTGGCAAGCGCTACAACGGCAGCGACCCAGCCTCGG...TTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTCTCCATCTGAGCATTaGCAATCAGGAACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFISPSEH*QSGTSD
Trigger: GTCGGAAGTTCCTGATTGCCAATGCTCAGATGGAGA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTCCAGGCAGCGGAAGCTaGAGGCATCCTTGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: NSLCCTLRISVLHELLLCPGSGS*RHPCGS
Trigger: ACTACCGCAAGGATGCCTCCAGCTTCCGCTGCCTGG...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp CTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCATGAATGGGACAACAGGCGCTaGGACAAGCTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSQYKTTHKISRVRPEHEWDNRR*DKLRLL
Trigger: CAGCAGCCGCAGCTTGTCCCAGCGCCTGTTGTCCCA...TTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGGAGTTCCTGTGCTTTaGACTACAGTCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIGVPVL*TTVIQV
Trigger: GACTTGGATGACTGTAGTCCAAAGCACAGGAACTCC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTATCTTGGAGTTCAGTaGCCCCAACTCCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIYLGVQ*PQLPAN
Trigger: ATTTGCAGGGAGTTGGGGCCACTGAACTCCAAGATA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CCA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTATGGTGTCTTTATCTTaGAGTTCAGTGGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLMVSLS*SSVAPT
Trigger: AGTTGGGGCCACTGAACTCCAAGATAAAGACACCAT...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR TCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGGTGTGTTGGGGCCTGTaGGGAAGTCGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEVCWGL*GSRRCR
Trigger: CCTGCACCTGCGACTTCCTCACAGGCCCCAACACAC...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR TCA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTATTCGTCCTGATCGCTaGGCAGGAAGGCGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: NSLCCTLRISVLHELLLCIRPDR*AGRRLS
Trigger: ACTCAGCCGCCTTCCTGCTCAGCGATCAGGACGAAT...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR TCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGTGCGGCGGGGGTGGCTaGCCACCTCATCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPECGGGG*PPHHWC
Trigger: ACACCAATGATGAGGTGGTCAGCCACCCCCGCCGCA...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTAGAGGATGTCCACCTTaGACTCCTCAGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: NSLCCTLRISVLHELLLCRGCPP*TPQPPA
Trigger: TGCTGGGGGCTGAGGAGTGCAAGGTGGACATCCTCT...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGGGGACAAGCTGCGGCTaGTGCACTTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEGTSCG*CTWPGA
Trigger: AGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTCCC...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGGGACACGGCGCTGCTTaGTGTGTTGGGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEGHGAA*CVGACE
Trigger: CTCACAGGCCCCAACACACCAAGCAGCGCCGTGTCC...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGGAGCCCAGGAAGCTCTaGGACAACAGGCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEEPRKL*DNRRWD
Trigger: GTCCCAGCGCCTGTTGTCCCAGAGCTTCCTGGGCTC...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTGTGGAGCTGGAGCGGTaGTTCTCCAAGTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: NSLCCTLRISVLHELLLCVELER*FSKLNS
Trigger: GGAGTTCAACTTGGAGAAGCACCGCTCCAGCTCCAC...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGATGCAGGCCAGCCAGTaGGCTATGAGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEMQASQ*AMSAKV
Trigger: CACCTTCGCGCTCATAGCGCACTGGCTGGCCTGCAT...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCCCAGGGACAGGACCTaGGTGACCTTCTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEPRDRT*VTFSVT
Trigger: CGTCACTGAGAAGGTCACCCAGGTCCTGTCCCTGGG...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR GCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGGACTGCAGGTATAGCTaGAGGCCCCACGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEDCRYS*RPHAVI
Trigger: AATCACGGCGTGGGGCCTGCAGCTATACCTGCAGTC...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR TCA 90 bp CTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCATGAACCTCATCATTGGTGTTaGCATAGGTGGTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSQYKTTHKISRVRPEHEPHHWC*HRWCGS
Trigger: ACTTCCGCACCACCTATGTCAACACCAATGATGAGG...TTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTTCTCCATCTGAGCATTaGCAATCAGGAACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: NSLCCTLRISVLHELLLCSPSEH*QSGTSD
Trigger: GTCGGAAGTTCCTGATTGCCAATGCTCAGATGGAGA...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGGTTGAGCGTGAACTGTaGGATCTGGCTGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEVEREL*DLADGP
Trigger: AGGACCATCAGCCAGATCCCACAGTTCACGCTCAAC...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGGTGAACTGTGGGATCTaGCTGATGGTCCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEVNCGI*LMVLYL
Trigger: CAAGTACAGGACCATCAGCCAGATCCCACAGTTCAC...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTaGCATGAGGTCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEHEVRP*HEVSLT
Trigger: TGTGAGTGAGACCTCATGCCACGGCCTAACTTCATG...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
3UTR CAA 72 bp TTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATaGTTGCTATGTGTTATGTTCTATCTCAGTACAAAA +
Preference number: 4 (lower is better)
Translates to: LCCTLRISVLHE*LLCVMFYLSTK
Trigger: TTTTGTACTGAGATAGAACATAACACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR TCA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGGATCAGTGTACTGCATaGATTGTTGCTATGTGTTAT +
Preference number: 4 (lower is better)
Translates to: YVLSQYKTTHKISRVRPEDQCTA*IVAMCY
Trigger: ATAACACATAGCAACAATTCATGCAGTACACTGATC...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGCGCGCAGGCAGCCCTaGCCGGCGCCGCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLARRQP*PAPLKA
Trigger: AGCTTTCAGCGGCGCCGGCAAGGGCTGCCTGCGCGC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CTGCACCGAGGGGCCCGAGGCTGGGTCGCTGCCGTTGTAGCGCTTGCCAAGCTGACGTCTGCACTGGACTaGCCTGGCTGGGCATGGAGG +
Preference number: 5 (lower is better)
Translates to: LHRGARGWVAAVVALAKLTSALD*PGWAWR
Trigger: CCTCCATGCCCAGCCAGGCAAGTCCAGTGCAGACGT...CAGCTTGGCAAGCGCTACAACGGCAGCGACCCAGCCTCGGGCCCCTCGGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp GCGGTCCAGCTTCCGTGCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAAGTCTTCCTGAGGGCTTaGGGGGCTGTGCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: AVQLPCYAHQPQQPRCLQVFLRA*GAVPWG
Trigger: CCCCCAAGGCACAGCCCCCAAAGCCCTCAGGAAGAC...TTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGCACGGAAGCTGGACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp TGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCAGCCTGCGCGGCGCCTGCAGCTaGTACTCCGGCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: WRSCKMRLRSEDTRDSSLRGACS*YSGSTS
Trigger: GGATGTGCTGCCGGAGTACAAGCTGCAGGCGCCGCG...CAGGCTGGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGCGCGCAGGCAGCCCTaGCCGGCGCCGCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLARRQP*PAPLKA
Trigger: AGCTTTCAGCGGCGCCGGCAAGGGCTGCCTGCGCGC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS GCA 90 bp AGCGGAAGCTGGAGGCATCCTTGCGGTAGTAGAGGATGTCCACCTTaGACTCCTCAGCCCCCAGCAGGGCCTGCGCTAGGCGGGACACGG +
Preference number: 5 (lower is better)
Translates to: SGSWRHPCGSRGCPP*TPQPPAGPALGGTR
Trigger: CCGTGTCCCGCCTAGCGCAGGCCCTGCTGGGGGCTGAGGAGTGCAAGGTGGACATCCTCTACTACCGCAAGGATGCCTCCAGCTTCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000580652.5
ENST00000581784.5
ENST00000583023.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCGCGGCGCCTGCAGCTaGTACTCCGGCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLRGACS*YSGSTS
Trigger: GGATGTGCTGCCGGAGTACAAGCTGCAGGCGCCGCG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp GGCTTCTGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCGGCGCGTGGGTGGTCTaGAACTTGACGGCTAGCGCG +
Preference number: 5 (lower is better)
Translates to: GFWRSCKMRLRSEDTRDSGAWVV*NLTASA
Trigger: CGCGCTAGCCGTCAAGTTCAAGACCACCCACGCGCC...GGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCAGAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCGCGGCGCCTGCAGCTaGTACTCCGGCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLRGACS*YSGSTS
Trigger: GGATGTGCTGCCGGAGTACAAGCTGCAGGCGCCGCG...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGGCGCGCAGGCAGCCCTaGCCGGCGCCGCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSARRQP*PAPLKA
Trigger: AGCTTTCAGCGGCGCCGGCAAGGGCTGCCTGCGCGC...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGTCTTCCTGAGGGCTTaGGGGGCTGTGCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLVFLRA*GAVPWG
Trigger: CCCCCAAGGCACAGCCCCCAAAGCCCTCAGGAAGAC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCTGATGGTCCTGTACTaGCCCCTGCCTGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLLMVLY*PLPVPG
Trigger: GCCAGGCACAGGCAGGGGCAAGTACAGGACCATCAG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTGCGCGCAGGCAGCCCTaGCCGGCGCCGCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: VSFFTHAILGHLDQQFVAARRQP*PAPLKA
Trigger: AGCTTTCAGCGGCGCCGGCAAGGGCTGCCTGCGCGC...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTGGGTGGTCTTGAACTaGACGGCTAGCGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLWVVLN*TASARR
Trigger: CCTGCGCGCGCTAGCCGTCAAGTTCAAGACCACCCA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTGGGTGGTCTTGAACTaGACGGCTAGCGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RTSRSSRAVFNSPIRVVVWVVLN*TASARR
Trigger: CCTGCGCGCGCTAGCCGTCAAGTTCAAGACCACCCA...GACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGGGTCGCTGCCGTTGTAGCGCTTGCCAAGCTGCACACCCAGGCTGTCCAGCCTTTGGGGGCTGTGCCTaGGGGGCATTTCCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: LGRCRCSACQAAHPGCPAFGGCA*GAFPAV
Trigger: TACTGCAGGAAATGCCCCCAAGGCACAGCCCCCAAA...GGCTGGACAGCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCAGCGACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGTCTTCCTGAGGGCTTaGGGGGCTGTGCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLVFLRA*GAVPWG
Trigger: CCCCCAAGGCACAGCCCCCAAAGCCCTCAGGAAGAC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCTGATGGTCCTGTACTaGCCCCTGCCTGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPLMVLY*PLPVPG
Trigger: GCCAGGCACAGGCAGGGGCAAGTACAGGACCATCAG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCGCGGCGCCTGCAGCTaGTACTCCGGCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQRGACS*YSGSTS
Trigger: GGATGTGCTGCCGGAGTACAAGCTGCAGGCGCCGCG...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGCGCGCAGGCAGCCCTaGCCGGCGCCGCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSARRQP*PAPLKA
Trigger: AGCTTTCAGCGGCGCCGGCAAGGGCTGCCTGCGCGC...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTGGCGCGTGGGTGGTCTaGAACTTGACGGCTAGCGCG +
Preference number: 5 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSGAWVV*NLTASA
Trigger: CGCGCTAGCCGTCAAGTTCAAGACCACCCACGCGCC...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTACGTCTGCACTGGACTaGCCTGGCTGGGCATGGAGG +
Preference number: 5 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPTSALD*PGWAWR
Trigger: CCTCCATGCCCAGCCAGGCAAGTCCAGTGCAGACGT...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGCTGCGTCCCGCAGGTaGAAGGTGACCTCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLAASRR*KVTSSL
Trigger: TAAGCTGGAGGTCACCTTCAACCTGCGGGACGCAGC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGAAACCTTGGTGGTCTaGGCTGCCAGGAGCCTGTCG +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLETLVV*AARSLS
Trigger: CGACAGGCTCCTGGCAGCCAAGACCACCAAGGTTTC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAGTCTTCCTGAGGGCTTaGGGGGCTGTGCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PTLHQACCLNGALEEAGKVFLRA*GAVPWG
Trigger: CCCCCAAGGCACAGCCCCCAAAGCCCTCAGGAAGAC...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCACCAAGGCCAGGTCATaGGAGGCAGGGGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLTKARS*EAGASR
Trigger: TCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGGT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp TGGAGGAGCTGCAAGATGCGGCTGAGGTCTGAGGACACGCGGGACTCCAGCCTGTTCTCGGAGTTGGTGTaGGGCGAGACATTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: WRSCKMRLRSEDTRDSSLFSELV*GETLPK
Trigger: CTTCGGCAATGTCTCGCCCAACACCAACTCCGAGAA...CAGGCTGGAGTCCCGCGTGTCCTCAGACCTCAGCCGCATCTTGCAGCTCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTTGGGTGGTCTTGAACTaGACGGCTAGCGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSWVVLN*TASARR
Trigger: CCTGCGCGCGCTAGCCGTCAAGTTCAAGACCACCCA...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCGGCGCGTGGGTGGTCTaGAACTTGACGGCTAGCGCG +
Preference number: 5 (lower is better)
Translates to: GLEDCPDMSATEHTSISSGAWVV*NLTASA
Trigger: CGCGCTAGCCGTCAAGTTCAAGACCACCCACGCGCC...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGGCGCGTGGGTGGTCTaGAACTTGACGGCTAGCGCG +
Preference number: 5 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVGAWVV*NLTASA
Trigger: CGCGCTAGCCGTCAAGTTCAAGACCACCCACGCGCC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCGCTGCGTCCCGCAGGTaGAAGGTGACCTCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLAASRR*KVTSSL
Trigger: TAAGCTGGAGGTCACCTTCAACCTGCGGGACGCAGC...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTGAAACCTTGGTGGTCTaGGCTGCCAGGAGCCTGTCG +
Preference number: 5 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPETLVV*AARSLS
Trigger: CGACAGGCTCCTGGCAGCCAAGACCACCAAGGTTTC...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCCAAGTCTCCATAGCTaGGGGTCTGTGCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLPSLHS*GSVQEA
Trigger: TGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp GCTACGCGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGATGGTGCCAGAGTTTaGTCCGTTGCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: ATRTSRSSRAVFNSPIRVDGARV*SVATAR
Trigger: CCTGGCTGTGGCAACGGACAAAACTCTGGCACCATC...AACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCGCGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGGACCAACCCCGGGCCTaGGTGCTGAGCCATGAGGTG +
Preference number: 5 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSDQPRA*VLSHEV
Trigger: CACCTCATGGCTCAGCACCAAGGCCCGGGGTTGGTC...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATAGCCCAATCAGGGTaGTGGTCTCATCGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLIAQSG*WSHRSQ
Trigger: CTGGCTCCGATGAGACCACAACCCTGATTGGGCTAT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCATAGCCCAATCAGGGTaGTGGTCTCATCGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: RTSRSSRAVFNSPIRVVVIAQSG*WSHRSQ
Trigger: CTGGCTCCGATGAGACCACAACCCTGATTGGGCTAT...GACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACAGGGCTGTGACATACTaGTCCTGCACCGAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHRAVTY*SCTEGP
Trigger: GGGCCCCTCGGTGCAGGACAAGTATGTCACAGCCCT...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTTCTCGGAGTTGGTGTaGGGCGAGACATTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLFSELV*GETLPK
Trigger: CTTCGGCAATGTCTCGCCCAACACCAACTCCGAGAA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGGGTGGTCTTGAACTaGACGGCTAGCGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSWVVLN*TASARR
Trigger: CCTGCGCGCGCTAGCCGTCAAGTTCAAGACCACCCA...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCGGCGCGTGGGTGGTCTaGAACTTGACGGCTAGCGCG +
Preference number: 5 (lower is better)
Translates to: LNGALEEAGKSRELLHPRGAWVV*NLTASA
Trigger: CGCGCTAGCCGTCAAGTTCAAGACCACCCACGCGCC...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCACGTCTGCACTGGACTaGCCTGGCTGGGCATGGAGG +
Preference number: 5 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVTSALD*PGWAWR
Trigger: CCTCCATGCCCAGCCAGGCAAGTCCAGTGCAGACGT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTACCAAGGCCAGGTCATaGGAGGCAGGGGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSTKARS*EAGASR
Trigger: TCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGGT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCAAGTCTCCATAGCTaGGGGTCTGTGCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPPSLHS*GSVQEA
Trigger: TGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCCAGAGTTTTGTCCGTaGCCACAGCCAGGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLPEFCP*PQPGEA
Trigger: TGCCTCACCTGGCTGTGGCAACGGACAAAACTCTGG...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTGGAAGTCCAGCTGCTaGGGAACAGAGCCAAGGTGT +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLWKSSC*GTEPRC
Trigger: ACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCCA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CTGGGTCGCTGCCGTTGTAGCGCTTGCCAAGCTGCACACCCAGGCTGTCCAGCCCATGGTGTCTTTATCTaGGAGTTCAGTGGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: LGRCRCSACQAAHPGCPAHGVFI*EFSGPN
Trigger: GTTGGGGCCACTGAACTCCAAGATAAAGACACCATG...GGCTGGACAGCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCAGCGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCTAAAGGAAATCCCCTaGCCCACCTTCAGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLLKEIP*PTFSPL
Trigger: GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCAGGAACTTCCGACTTaGGCCCTCGAACTTGCGGAT +
Preference number: 5 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPQELPT*ALELAD
Trigger: ATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCTG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCTGATGGTCCTGTACTaGCCCCTGCCTGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVLMVLY*PLPVPG
Trigger: GCCAGGCACAGGCAGGGGCAAGTACAGGACCATCAG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCGCGGCGCCTGCAGCTaGTACTCCGGCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFRGACS*YSGSTS
Trigger: GGATGTGCTGCCGGAGTACAAGCTGCAGGCGCCGCG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCAAGACCTTCTCGGAGTaGGTGTTGGGCGAGACATTG +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLKTFSE*VLGETL
Trigger: CAATGTCTCGCCCAACACCAACTCCGAGAAGGTCTT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CGCACCAGCCGCAGCAGCCGCGCTGTCTTCAATAGCCCAATCAGGGTTGTGGTCAAGACCTTCTCGGAGTaGGTGTTGGGCGAGACATTG +
Preference number: 5 (lower is better)
Translates to: RTSRSSRAVFNSPIRVVVKTFSE*VLGETL
Trigger: CAATGTCTCGCCCAACACCAACTCCGAGAAGGTCTT...GACCACAACCCTGATTGGGCTATTGAAGACAGCGCGGCTGCTGCGGCTGGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTGGGTGGTCTTGAACTaGACGGCTAGCGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVWVVLN*TASARR
Trigger: CCTGCGCGCGCTAGCCGTCAAGTTCAAGACCACCCA...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGGCTGCGTCCCGCAGGTaGAAGGTGACCTCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSAASRR*KVTSSL
Trigger: TAAGCTGGAGGTCACCTTCAACCTGCGGGACGCAGC...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CTGGGTCGCTGCCGTTGTAGCGCTTGCCAAGCTGCACACCCAGGCTGTCCAGCCGCTGCATCTGACTGGTaGTCACTGAGAAAGAAACCT +
Preference number: 5 (lower is better)
Translates to: LGRCRCSACQAAHPGCPAAASDW*SLRKKP
Trigger: AGGTTTCTTTCTCAGTGACAACCAGTCAGATGCAGC...GGCTGGACAGCCTGGGTGTGCAGCTTGGCAAGCGCTACAACGGCAGCGACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGACCAAGGCCAGGTCATaGGAGGCAGGGGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQTKARS*EAGASR
Trigger: TCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGGT...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCAAGTCTCCATAGCTaGGGGTCTGTGCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSPSLHS*GSVQEA
Trigger: TGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCAGAGTTTTGTCCGTaGCCACAGCCAGGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSPEFCP*PQPGEA
Trigger: TGCCTCACCTGGCTGTGGCAACGGACAAAACTCTGG...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTGATGGTGCCAGAGTTTaGTCCGTTGCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSDGARV*SVATAR
Trigger: CCTGGCTGTGGCAACGGACAAAACTCTGGCACCATC...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCTTGAACTCCACGAAGTaGAGCGTGAACTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLLNSTK*SVNCGI
Trigger: GATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAA...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCCGGTGCTTCTCCAAGTaGAACTCCACGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLRCFSK*NSTKLS
Trigger: GCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCG...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGGGGGCTGTGCCTaGGGGGCATTTCCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVFGGCA*GAFPAV
Trigger: TACTGCAGGAAATGCCCCCAAGGCACAGCCCCCAAA...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGTCTTCCTGAGGGCTTaGGGGGCTGTGCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFVFLRA*GAVPWG
Trigger: CCCCCAAGGCACAGCCCCCAAAGCCCTCAGGAAGAC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCACCAAGGCCAGGTCATaGGAGGCAGGGGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVTKARS*EAGASR
Trigger: TCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGGT...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGCCAGAGTTTTGTCCGTaGCCACAGCCAGGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSPEFCP*PQPGEA
Trigger: TGCCTCACCTGGCTGTGGCAACGGACAAAACTCTGG...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCAGAGTTTTGTCCGTaGCCACAGCCAGGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVPEFCP*PQPGEA
Trigger: TGCCTCACCTGGCTGTGGCAACGGACAAAACTCTGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCGATGGTGCCAGAGTTTaGTCCGTTGCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVDGARV*SVATAR
Trigger: CCTGGCTGTGGCAACGGACAAAACTCTGGCACCATC...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCCATGGTGTCTTTATCTaGGAGTTCAGTGGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLHGVFI*EFSGPN
Trigger: GTTGGGGCCACTGAACTCCAAGATAAAGACACCATG...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGACCAACCCCGGGCCTaGGTGCTGAGCCATGAGGTG +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFDQPRA*VLSHEV
Trigger: CACCTCATGGCTCAGCACCAAGGCCCGGGGTTGGTC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCAGGAACTTCCGACTTaGGCCCTCGAACTTGCGGAT +
Preference number: 5 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVQELPT*ALELAD
Trigger: ATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCTG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCTGATGGTCCTGTACTaGCCCCTGCCTGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFLMVLY*PLPVPG
Trigger: GCCAGGCACAGGCAGGGGCAAGTACAGGACCATCAG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCTTGAACTCCACGAAGTaGAGCGTGAACTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: PATSPRSLTLTLPTFSPLLNSTK*SVNCGI
Trigger: GATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAA...GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGATAGCCCAATCAGGGTaGTGGTCTCATCGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PAPGLLFKWSPGGGWEKSIAQSG*WSHRSQ
Trigger: CTGGCTCCGATGAGACCACAACCCTGATTGGGCTAT...CGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCCACCCTGCACCAGGCTTGCTGTTTAAATGGAGCCCTGGAGGAGGCTGGGAAAAAGACCTTCTCGGAGTaGGTGTTGGGCGAGACATTG +
Preference number: 5 (lower is better)
Translates to: PTLHQACCLNGALEEAGKKTFSE*VLGETL
Trigger: CAATGTCTCGCCCAACACCAACTCCGAGAAGGTCTT...TTTCCCAGCCTCCTCCAGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTACGTCTGCACTGGACTaGCCTGGCTGGGCATGGAGG +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFTSALD*PGWAWR
Trigger: CCTCCATGCCCAGCCAGGCAAGTCCAGTGCAGACGT...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTACGTCTGCACTGGACTaGCCTGGCTGGGCATGGAGG +
Preference number: 5 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPTSALD*PGWAWR
Trigger: CCTCCATGCCCAGCCAGGCAAGTCCAGTGCAGACGT...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTACTGAGAAAGAAACCTaGGTGGTCTTGGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSTEKET*VVLAAR
Trigger: CCTGGCAGCCAAGACCACCAAGGTTTCTTTCTCAGT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCGCTGCATCTGACTGGTaGTCACTGAGAAAGAAACCT +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLAASDW*SLRKKP
Trigger: AGGTTTCTTTCTCAGTGACAACCAGTCAGATGCAGC...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCAAGTCTCCATAGCTaGGGGTCTGTGCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVPSLHS*GSVQEA
Trigger: TGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GCCCGCCACCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCAGGAGTTCCTGTGCTTaGGACTACAGTCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: ARHHAQLKEIPLPTFSPLRSSCA*DYSHPS
Trigger: ACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCT...GAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGGTGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCCAGAGTTTTGTCCGTaGCCACAGCCAGGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVPEFCP*PQPGEA
Trigger: TGCCTCACCTGGCTGTGGCAACGGACAAAACTCTGG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCGATGGTGCCAGAGTTTaGTCCGTTGCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVDGARV*SVATAR
Trigger: CCTGGCTGTGGCAACGGACAAAACTCTGGCACCATC...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTaGGAGTTCAGTGGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: PGHLPKILNSHLAHLQSPHGVFI*EFSGPN
Trigger: GTTGGGGCCACTGAACTCCAAGATAAAGACACCATG...AGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp TCTTCACTGCCCCCTCAATCCTGTAAGCTGCCTCCACACCTGAGACTCTCCCACTCCTTAACTCTCACCTaGCCCACCTTCAGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: SSLPPQSCKLPPHLRLSHSLTLT*PTFSPL
Trigger: GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGA...GTGGGAGAGTCTCAGGTGTGGAGGCAGCTTACAGGATTGAGGGGGCAGTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp GGGCTGGAGGACTGTCCTGACATGTCTGCCACAGAACATACCTCCATCTCCAGCTCCTTAACTCTCACCTaGCCCACCTTCAGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GLEDCPDMSATEHTSISSSLTLT*PTFSPL
Trigger: GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGA...GCTGGAGATGGAGGTATGTTCTGTGGCAGACATGTCAGGACAGTCCTCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCCAGGAACTTCCGACTTaGGCCCTCGAACTTGCGGAT +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVQELPT*ALELAD
Trigger: ATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCTG...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCGGTGCTTCTCCAAGTaGAACTCCACGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: LGKVVSFFTHAILGHLDQRCFSK*NSTKLS
Trigger: GCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCG...CTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCACGACTTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCCGGTGCTTCTCCAAGTaGAACTCCACGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVRCFSK*NSTKLS
Trigger: GCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCG...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTATAGCCCAATCAGGGTaGTGGTCTCATCGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: VSFFTHAILGHLDQQFVAIAQSG*WSHRSQ
Trigger: CTGGCTCCGATGAGACCACAACCCTGATTGGGCTAT...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCATAGCCCAATCAGGGTaGTGGTCTCATCGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVIAQSG*WSHRSQ
Trigger: CTGGCTCCGATGAGACCACAACCCTGATTGGGCTAT...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTCTCGGAGTTGGTGTaGGGCGAGACATTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVFSELV*GETLPK
Trigger: CTTCGGCAATGTCTCGCCCAACACCAACTCCGAGAA...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTGAAACCTTGGTGGTCTaGGCTGCCAGGAGCCTGTCG +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFETLVV*AARSLS
Trigger: CGACAGGCTCCTGGCAGCCAAGACCACCAAGGTTTC...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCATGCCCAGCTAAAGGAAATCCCCTTGCCCACCTTCAGTCCCCTCATGGTGTCACTGAGAAAGAAACCTaGGTGGTCTTGGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PCPAKGNPLAHLQSPHGVTEKET*VVLAAR
Trigger: CCTGGCAGCCAAGACCACCAAGGTTTCTTTCTCAGT...GACACCATGAGGGGACTGAAGGTGGGCAAGGGGATTTCCTTTAGCTGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581784.5
CDS-3UTR CAA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCACCCTGCACCAGGCTaGCTGTTTAAATGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: LNGALEEAGKSRELLHPRHPAPG*LFKWSP
Trigger: AGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTG...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCAGGGCTGTGACATACTaGTCCTGCACCGAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIRAVTY*SCTEGP
Trigger: GGGCCCCTCGGTGCAGGACAAGTATGTCACAGCCCT...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCAAGACCTTCTCGGAGTaGGTGTTGGGCGAGACATTG +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVKTFSE*VLGETL
Trigger: CAATGTCTCGCCCAACACCAACTCCGAGAAGGTCTT...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCAAGACCTTCTCGGAGTaGGTGTTGGGCGAGACATTG +
Preference number: 5 (lower is better)
Translates to: LNGALEEAGKSRELLHPRKTFSE*VLGETL
Trigger: CAATGTCTCGCCCAACACCAACTCCGAGAAGGTCTT...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTACTGAGAAAGAAACCTaGGTGGTCTTGGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VSFFTHAILGHLDQQFVATEKET*VVLAAR
Trigger: CCTGGCAGCCAAGACCACCAAGGTTTCTTTCTCAGT...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTTTGGGGGCTGTGCCTaGGGGGCATTTCCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFFGGCA*GAFPAV
Trigger: TACTGCAGGAAATGCCCCCAAGGCACAGCCCCCAAA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTTTTGGGGGCTGTGCCTaGGGGGCATTTCCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPFGGCA*GAFPAV
Trigger: TACTGCAGGAAATGCCCCCAAGGCACAGCCCCCAAA...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCCAAGTCTCCATAGCTaGGGGTCTGTGCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFPSLHS*GSVQEA
Trigger: TGCCTCCTGCACAGACCCCAAGCTATGGAGACTTGG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGCACCCGGCCACCTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTAGGAGTTCCTGTGCTTaGGACTACAGTCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: LHPATSPRSLTLTLPTFSRSSCA*DYSHPS
Trigger: ACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCT...ACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAGGTGGCCGGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GAGGGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTGATGGTGCCAGAGTTTaGTCCGTTGCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: EGSELGGSEQGTHVDQKPDGARV*SVATAR
Trigger: CCTGGCTGTGGCAACGGACAAAACTCTGGCACCATC...AGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTGGAAGTCCAGCTGCTaGGGAACAGAGCCAAGGTGT +
Preference number: 5 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSWKSSC*GTEPRC
Trigger: ACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCCA...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTGTCTTCAATAGCCCAATCAGGGTTGTGGTCTCATCGGAGCCAGTGCGGAAGATGGAAGTCCAGCTGCTaGGGAACAGAGCCAAGGTGT +
Preference number: 5 (lower is better)
Translates to: LSSIAQSGLWSHRSQCGRWKSSC*GTEPRC
Trigger: ACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCCA...TCTTCCGCACTGGCTCCGATGAGACCACAACCCTGATTGGGCTATTGAAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp GGGAGGAGTTCCTGTGCTTTGGACTACAGTCATCCAAGTCTCCATAGCTTGGGGTCCTTAACTCTCACCTaGCCCACCTTCAGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GRSSCALDYSHPSLHSLGSLTLT*PTFSPL
Trigger: GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGA...CCCCAAGCTATGGAGACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCAGGAACTTCCGACTTaGGCCCTCGAACTTGCGGAT +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFQELPT*ALELAD
Trigger: ATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCTG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGAGGGCTGTGACATACTaGTCCTGCACCGAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: THKISRVRPEHEVRPWHERAVTY*SCTEGP
Trigger: GGGCCCCTCGGTGCAGGACAAGTATGTCACAGCCCT...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp TCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTACTGAGAAAGAAACCTaGGTGGTCTTGGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: SPRSLTLTLPTFSPLMVSTEKET*VVLAAR
Trigger: CCTGGCAGCCAAGACCACCAAGGTTTCTTTCTCAGT...AGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCACCAAGGCCAGGTCATaGGAGGCAGGGGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: KILNSHLAHLQSPHGVFITKARS*EAGASR
Trigger: TCTGGAAGCCCCTGCCTCCAATGACCTGGCCTTGGT...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTGGAAGTCCAGCTGCTaGGGAACAGAGCCAAGGTGT +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFWKSSC*GTEPRC
Trigger: ACACCTTGGCTCTGTTCCCAAGCAGCTGGACTTCCA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCCATGGTGTCTTTATCTaGGAGTTCAGTGGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: LNGALEEAGKSRELLHPRHGVFI*EFSGPN
Trigger: GTTGGGGCCACTGAACTCCAAGATAAAGACACCATG...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTCCTTAACTCTCACCTaGCCCACCTTCAGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFSLTLT*PTFSPL
Trigger: GAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTCGGTGCTTCTCCAAGTaGAACTCCACGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFRCFSK*NSTKLS
Trigger: GCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCG...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTTTCTCGGAGTTGGTGTaGGGCGAGACATTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLFSELV*GETLPK
Trigger: CTTCGGCAATGTCTCGCCCAACACCAACTCCGAGAA...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCGCTGCATCTGACTGGTaGTCACTGAGAAAGAAACCT +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVAASDW*SLRKKP
Trigger: AGGTTTCTTTCTCAGTGACAACCAGTCAGATGCAGC...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583465.1
CDS-3UTR CAA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTTTGGGGGCTGTGCCTaGGGGGCATTTCCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIFGGCA*GAFPAV
Trigger: TACTGCAGGAAATGCCCCCAAGGCACAGCCCCCAAA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp TTAAATGGAGCCCTGGAGGAGGCTGGGAAAAGTCGTGAGCTTCTTCACCCACGCAGGAGTTCCTGTGCTTaGGACTACAGTCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: LNGALEEAGKSRELLHPRRSSCA*DYSHPS
Trigger: ACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCT...GCGTGGGTGAAGAAGCTCACGACTTTTCCCAGCCTCCTCCAGGGCTCCATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp GTGAGCTTCTTCACCCACGCCATCCTGGGTCACCTGGATCAGCAGTTTGTAGCTAGGAGTTCCTGTGCTTaGGACTACAGTCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: VSFFTHAILGHLDQQFVARSSCA*DYSHPS
Trigger: ACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCT...AGCTACAAACTGCTGATCCAGGTGACCCAGGATGGCGTGGGTGAAGAAGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CTCCCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCAGGAGTTCCTGTGCTTaGGACTACAGTCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: LPKILNSHLAHLQSPHGVRSSCA*DYSHPS
Trigger: ACTTGGATGACTGTAGTCCAAAGCACAGGAACTCCT...GACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTCACCCTGCACCAGGCTaGCTGTTTAAATGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLHPAPG*LFKWSP
Trigger: AGGGCTCCATTTAAACAGCAAGCCTGGTGCAGGGTG...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp CCCAAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTTTGAACTCCACGAAGTaGAGCGTGAACTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: PKILNSHLAHLQSPHGVFLNSTK*SVNCGI
Trigger: GATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAA...AAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCTTCTCGGAGTTGGTGTaGGGCGAGACATTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIFSELV*GETLPK
Trigger: CTTCGGCAATGTCTCGCCCAACACCAACTCCGAGAA...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp GGTTCTGAGCTGGGAGGCTCAGAGCAAGGTACTCATGTAGATCAGAAACCTCTTTTGAACTCCACGAAGTaGAGCGTGAACTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: GSELGGSEQGTHVDQKPLLNSTK*SVNCGI
Trigger: GATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAA...AAGAGGTTTCTGATCTACATGAGTACCTTGCTCTGAGCCTCCCAGCTCAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314672.10
ENST00000583023.1
CDS-3UTR CAA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCCGGTGCTTCTCCAAGTaGAACTCCACGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIRCFSK*NSTKLS
Trigger: GCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCG...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGATAGCCCAATCAGGGTaGTGGTCTCATCGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: THKISRVRPEHEVRPWHEIAQSG*WSHRSQ
Trigger: CTGGCTCCGATGAGACCACAACCCTGATTGGGCTAT...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGCGGTGCTTCTCCAAGTaGAACTCCACGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: THKISRVRPEHEVRPWHERCFSK*NSTKLS
Trigger: GCTCAACTTCGTGGAGTTCAACTTGGAGAAGCACCG...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCGCGGCGCCTGCAGCTaGTACTCCGGCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: YVLSQYKTTHKISRVRPERGACS*YSGSTS
Trigger: GGATGTGCTGCCGGAGTACAAGCTGCAGGCGCCGCG...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp ACACATAAAATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTGGCATGAGAAGACCTTCTCGGAGTaGGTGTTGGGCGAGACATTG +
Preference number: 5 (lower is better)
Translates to: THKISRVRPEHEVRPWHEKTFSE*VLGETL
Trigger: CAATGTCTCGCCCAACACCAACTCCGAGAAGGTCTT...CTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCCATGGTGTCTTTATCTaGGAGTTCAGTGGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIHGVFI*EFSGPN
Trigger: GTTGGGGCCACTGAACTCCAAGATAAAGACACCATG...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583023.1
ENST00000583465.1
CDS-3UTR CAA 90 bp CTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCATGAACTGATGGTCCTGTACTaGCCCCTGCCTGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LSQYKTTHKISRVRPEHELMVLY*PLPVPG
Trigger: GCCAGGCACAGGCAGGGGCAAGTACAGGACCATCAG...TTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp AAGATCCTTAACTCTCACCTTGCCCACCTTCAGTCCCCTCATGGTGTCTTTATCGCTGCATCTGACTGGTaGTCACTGAGAAAGAAACCT +
Preference number: 5 (lower is better)
Translates to: KILNSHLAHLQSPHGVFIAASDW*SLRKKP
Trigger: AGGTTTCTTTCTCAGTGACAACCAGTCAGATGCAGC...GATAAAGACACCATGAGGGGACTGAAGGTGGGCAAGGTGAGAGTTAAGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314672.10
ENST00000456941.6
ENST00000583465.1
CDS-3UTR CAA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTTTCTCGGAGTTGGTGTaGGGCGAGACATTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: NSLCCTLRISVLHELLLCFSELV*GETLPK
Trigger: CTTCGGCAATGTCTCGCCCAACACCAACTCCGAGAA...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp CTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGCATGAACAGGAACTTCCGACTTaGGCCCTCGAACTTGCGGAT +
Preference number: 5 (lower is better)
Translates to: LSQYKTTHKISRVRPEHEQELPT*ALELAD
Trigger: ATCCGCAAGTTCGAGGGCCAAAGTCGGAAGTTCCTG...TTCATGCTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp TATGTTCTATCTCAGTACAAAACTACACATAAAATTTCACGGGTAAGACCAGAGTTGAACTCCACGAAGTaGAGCGTGAACTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: YVLSQYKTTHKISRVRPELNSTK*SVNCGI
Trigger: GATCCCACAGTTCACGCTCAACTTCGTGGAGTTCAA...CTCTGGTCTTACCCGTGAAATTTTATGTGTAGTTTTGTACTGAGATAGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS-3UTR CAA 90 bp AATTCATTGTGCTGCACACTTAGGATCAGTGTACTGCATGAATTGTTGCTATGTAGTGTACTGCATGAATaGTTGCTATGTGTTATGTTC +
Preference number: 5 (lower is better)
Translates to: NSLCCTLRISVLHELLLCSVLHE*LLCVMF
Trigger: GAACATAACACATAGCAACAATTCATGCAGTACACT...ACATAGCAACAATTCATGCAGTACACTGATCCTAAGTGTGCAGCACAATGAATT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580652.5
CDS CCA 72 bp TCGGCCGCGGCCCCTGCCCGGAGCCACAGGCGCCACTaGCTCCCGGCGTCTCCGTCTGTCCTCGGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SAAAPARSHRRH*LPASPSVLGLS
Trigger: GCTGAGCCCGAGGACAGACGGAGACGCCGGGAGCCAGTGGCGCCTGTGGCTCCGGGCAGGGGCCGCGGCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456941.6
ENST00000581784.5
CDS CCA 72 bp ATTTCACGGGTAAGACCAGAGCATGAAGTTAGGCCGTaGCATGAGGTCTCACTCACAGCCGATGAGCATGAC +
Preference number: 6 (lower is better)
Translates to: ISRVRPEHEVRP*HEVSLTADEHD
Trigger: GTCATGCTCATCGGCTGTGAGTGAGACCTCATGCCACGGCCTAACTTCATGCTCTGGTCTTACCCGTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580652.5