RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNH4 (Homo sapiens)

Ensembl gene IDs: ENSG00000089558

Ensembl transcript IDs: ENST00000264661.4, ENST00000607371.5

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTCATGCCTGCTaGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGT +
Preference number: 1 (lower is better)
Translates to: SSAQPNGHCGSSHAC*VPQPSGGSPHRGGG
Trigger: ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAGATGAACCGCAGTGCCCATTGGGCTGGGCAGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR GCA 90 bp ATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTCATGCCTaGTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGA +
Preference number: 1 (lower is better)
Translates to: ISSAQPNGHCGSSHA*WVPQPSGGSPHRGG
Trigger: TCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAGATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR TCA 90 bp GAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTaGGTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGG +
Preference number: 1 (lower is better)
Translates to: EESWRPGRVLEQSRP*VRPCCNGGEQAWQR
Trigger: CCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR GCA 90 bp TCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTaGGGTTCATCTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGC +
Preference number: 1 (lower is better)
Translates to: SWGESRISSAQPNGH*GSSHACWVPQPSGG
Trigger: GCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAGATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR TCA 90 bp AGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTaGGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTG +
Preference number: 1 (lower is better)
Translates to: RAGDLGEFWSSPGPE*DHVVMGENRLGSGL
Trigger: CAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR TCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCGTCCTCCCTGAGTGGTaGGCGGCAGCGCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPVLPEW*AAAPTP
Trigger: TGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGAC...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR TCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGGTCCTCCCTGAGTGGTaGGCGGCAGCGCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRVLPEW*AAAPTP
Trigger: TGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGAC...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR TCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATGGCCCAGGTCCTCCCTaGGTGGTGAGCGGCAGCGCC +
Preference number: 2 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHGPGPP*VVSGSA
Trigger: GGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCC...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR TCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCCCAGCTGGTGGCTGCTaGCCCCAAGGCAGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPPAGGC*PQGRKP
Trigger: TGGCTTCCTGCCTTGGGGTCAGCAGCCACCAGCTGG...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR CCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGGGGGGAGAACAGGCTTaGCAGCGGTCTGGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: LETWASFGAVQALSETMLGGEQA*QRSGVR
Trigger: CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCC...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATTCCACAGCCCTCAGGTaGCTCCCCTCACAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHSTALR*LPSQRG
Trigger: CCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGA...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR TCA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCGGCCCAGGTCCTCCCTaGGTGGTGAGCGGCAGCGCC +
Preference number: 2 (lower is better)
Translates to: EFISYPKVSPGCWVVEESGPGPP*VVSGSA
Trigger: GGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCC...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR TCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGCAGAAGAGACCACCTTaGGAGACAGCCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRQKRPP*ETACLQ
Trigger: CTGGAGGCAGGCTGTCTCTCAAGGTGGTCTCTTCTG...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264661.4
3UTR-3UTR GCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGCTGCGGTTCATCTCATaGCTGCTGGGTTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: LETWASFGAVQALSETMLLRFIS*LLGSTA
Trigger: GGCTGTGGAACCCAGCAGGCATGAGATGAACCGCAG...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR GCA 90 bp GTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACAGCCTCCAGGTCCTGGGGAGCAGCCCAATGGGCACTaGGGTTCATCTCATGCCTGC +
Preference number: 2 (lower is better)
Translates to: VASSRRDHLERQPPGPGEQPNGH*GSSHAC
Trigger: GCAGGCATGAGATGAACCGCAGTGCCCATTGGGCTG...CTCCCCAGGACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607371.5
3UTR-3UTR CCA 90 bp TGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTAACCAGGCCAGCTGGTaGCTGCTGACCCCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: WGESRISSAQPNGHCGSSNQASW*LLTPRQ
Trigger: CTGCCTTGGGGTCAGCAGCCACCAGCTGGCCTGGTT...AGATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGTCATCTCATGCCTGCTaGGTTCCACAGCCCTCAGGT +
Preference number: 2 (lower is better)
Translates to: RGELETWASFGAVQALSESSHAC*VPQPSG
Trigger: ACCTGAGGGCTGTGGAACCCAGCAGGCATGAGATGA...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR CCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGATCTGCCCAGCCCAATaGGCACTGCGGTTCATCTCA +
Preference number: 2 (lower is better)
Translates to: LETWASFGAVQALSETMLICPAQ*ALRFIS
Trigger: TGAGATGAACCGCAGTGCCCATTGGGCTGGGCAGAT...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR TCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGTGCTGTTGGGATTTTTaGGTTGCTAGCAGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRCCWDF*VASSRR
Trigger: TCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCA...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR GCA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCGGTTCATCTCATGCCTaGTGGGTTCCACAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: EFISYPKVSPGCWVVEESGSSHA*WVPQPS
Trigger: TGAGGGCTGTGGAACCCAGCAGGCATGAGATGAACC...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR CCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTAACCAGGCCAGCTGGTaGCTGCTGACCCCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSNQASW*LLTPRQ
Trigger: CTGCCTTGGGGTCAGCAGCCACCAGCTGGCCTGGTT...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR GCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGGTTCATCTCATGCCTaGTGGGTTCCACAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: VRERIGSAVGIFELLAAEGSSHA*WVPQPS
Trigger: TGAGGGCTGTGGAACCCAGCAGGCATGAGATGAACC...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR GCA 72 bp GCCCAGCCCAATGGGCACTGCGGTTCATCTCATGCCTaGTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: AQPNGHCGSSHA*WVPQPSGGSPH
Trigger: GTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAGATGAACCGCAGTGCCCATTGGGCTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR CCA 72 bp AAAGTCCAGAAATCCAGAGCCAACCAGGCCAGCTGGTaGCTGCTGACCCCAAGGCAGGAAGCCAAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: KVQKSRANQASW*LLTPRQEAKGP
Trigger: GGGCCCCTTGGCTTCCTGCCTTGGGGTCAGCAGCCACCAGCTGGCCTGGTTGGCTCTGGATTTCTGGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR CCA 72 bp CAGCCCAATGGGCACTGCGGTTCATCTCATGCCTGCTaGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGA +
Preference number: 3 (lower is better)
Translates to: QPNGHCGSSHAC*VPQPSGGSPHR
Trigger: TCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAGATGAACCGCAGTGCCCATTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR TCA 72 bp GACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTaGGACCATGTTGTAATGGGGGAGAACAGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: DLGEFWSSPGPE*DHVVMGENRLG
Trigger: GCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR-3UTR CAA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGGAGGTTGGGGAAGGCTaGGAAAAGGGAATAGCGTCA +
Preference number: 3 (lower is better)
Translates to: LETWASFGAVQALSETMLEVGEG*EKGIAS
Trigger: TGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR TCA 72 bp TGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTaGGTGAGACCATGTTGTAATGGGGGAGAACAGGCT +
Preference number: 3 (lower is better)
Translates to: WRPGRVLEQSRP*VRPCCNGGEQA
Trigger: AGCCTGTTCTCCCCCATTACAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR CCA 72 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTaGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTT +
Preference number: 3 (lower is better)
Translates to: EFISYPKVSPGC*VVEESWRPGRV
Trigger: AACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACAGCCTTCATGCCTCCCTaGCCCCGGCGGCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTAFMPP*PRRPKW
Trigger: CCACTTTGGCCGCCGGGGCCAGGGAGGCATGAAGGC...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACACCAGCTGGTGGCTGCTaGCCCCAAGGCAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTPAGGC*PQGRKP
Trigger: TGGCTTCCTGCCTTGGGGTCAGCAGCCACCAGCTGG...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACAGGCCGCGGCAGGCGGTaGACACGGATGAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTGRGRR*TRMKSL
Trigger: CAAGGACTTCATCCGTGTGCACCGCCTGCCGCGGCC...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACACTTTCTGAGCGGGGCTaGGAGAGGCGAGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTLSERG*ERRGDR
Trigger: CCGATCCCCTCGCCTCTCCCAGCCCCGCTCAGAAAG...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACAGGGGGAGAACAGGCTTaGCAGCGGTCTGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTGGEQA*QRSGVR
Trigger: CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCC...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCGTAGGCGCTGCGCCGTaGTGGGCCGCCCACCGAGCC +
Preference number: 4 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPVGAAP*WAAHRA
Trigger: GGCTCGGTGGGCGGCCCATCACGGCGCAGCGCCTAC...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTGTCCTCCCTGAGTGGTaGGCGGCAGCGCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGVLPEW*AAAPTP
Trigger: TGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGAC...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGCCTGTAGGGGGCGCCTaGGAGCGGGGCCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEPVGGA*ERGLGS
Trigger: ACTGCCAAGGCCCCGCTCCCAGGCGCCCCCTACAGG...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACATATTATTGGCCTTCATaGCTCCCTGGCCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTYYWPS*LPGPGG
Trigger: GCCGCCGGGGCCAGGGAGGCATGAAGGCCAATAATA...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGCAGCCCCTGCTCGCTaGCCCGAACAACGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEAAPAR*PEQRQL
Trigger: CAGCTGCCGTTGTTCGGGGCAGCGAGCAGGGGCTGC...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGTTCAAGGCGCGGCGCTaGGGAGCTTTCAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEFKARR*GAFSAA
Trigger: GGCCGCGCTGAAAGCTCCCCAGCGCCGCGCCTTGAA...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACACTGGAGGCTGGGTGGTaGTCTGGACGCACAAGGAGA +
Preference number: 4 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTLEAGW*SGRTRR
Trigger: TCTCCTTGTGCGTCCAGACCACCACCCAGCCTCCAG...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGGTAGGCGCTGCGCCGTaGTGGGCCGCCCACCGAGCC +
Preference number: 4 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRVGAAP*WAAHRA
Trigger: GGCTCGGTGGGCGGCCCATCACGGCGCAGCGCCTAC...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTTACTGCCGCTGCCGCTaGCGCTGCCTCTGCTCCGAA +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGYCRCR*RCLCSE
Trigger: TTCGGAGCAGAGGCAGCGGCAGCGGCAGCGGCAGTA...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264661.4
CDS-3UTR GCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGCCCTCCAGGGCTTTGTaGAGACGCTGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEPSRAL*RRCRAG
Trigger: GCCAGCCCTGCAGCGTCTGCACAAAGCCCTGGAGGG...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTTACCGCTCCAGCTTCTaGAGCAGCCGCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGYRSSF*SSRSSR
Trigger: GCGGCTGCTGCGGCTGCTGCAGAAGCTGGAGCGGTA...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGCTTTCTGAGCGGGGCTaGGAGAGGCGAGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGELSERG*ERRGDR
Trigger: CCGATCCCCTCGCCTCTCCCAGCCCCGCTCAGAAAG...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCGCCCCGAGGCCGTGCTaGGCTGAGGTTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPAPRPC*AEVGQQ
Trigger: CTGCTGCCCAACCTCAGCCCAGCACGGCCTCGGGGC...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACAGCAAGCGTAGTATCCTaGAGGCTGGGTGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTASVVS*RLGGGL
Trigger: CAGACCACCACCCAGCCTCCAGGATACTACGCTTGC...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGTCCACAGCCCTCAGGTaGCTCCCCTCACAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGESTALR*LPSQRG
Trigger: CCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGA...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGCCACGGCGATGTCGCTaGCAAGGGTGTGTCGCGAAG +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEPRRCR*QGCVAK
Trigger: CTTCGCGACACACCCTTGTCAGCGACATCGCCGTGG...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCCACGGCGATGTCGCTaGCAAGGGTGTGTCGCGAAG +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGPRRCR*QGCVAK
Trigger: CTTCGCGACACACCCTTGTCAGCGACATCGCCGTGG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTCGAGCATGCGCTGCTTaGGCGGCCGCGGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTRACAA*AAAAGG
Trigger: ACCGCCTGCCGCGGCCGCTCAAGCAGCGCATGCTCG...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGCGAGCATGCGCTGCTTaGGCGGCCGCGGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLRACAA*AAAAGG
Trigger: ACCGCCTGCCGCGGCCGCTCAAGCAGCGCATGCTCG...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGGGCCCAGGTCCTCCCTaGGTGGTGAGCGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLGPGPP*VVSGSA
Trigger: GGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCC...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGTGGGAAAGCCCCGTGTaGCCTGTGCGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEWESPV*PVRWPA
Trigger: TGCTGGCCAACGCACAGGGCACACGGGGCTTTCCCA...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCAGATTTCAGCCCGGTaGTCCTGGTGGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGQISAR*SWWPSR
Trigger: CCTGGAGGGCCACCAGGAGCACCGGGCTGAAATCTG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCCCAACCCAGGCTCCTaGCCCGGCTCAGGGATATCT +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGPNPGS*PGSGIS
Trigger: AGATATCCCTGAGCCGGGGCAGGAGCCTGGGTTGGG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTCATGGCCCCGGGGCGTaGGTTCAAGGCGCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTHGPGA*VQGAAL
Trigger: CAGCGCCGCGCCTTGAACCCACGCCCCGGGGCCATG...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGCAGTCCCTGTCTCCATaGTCCCCACACTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEQSLSP*SPHWLG
Trigger: GCCCAGCCAGTGTGGGGACCATGGAGACAGGGACTG...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACACCTGCCTCCAGGTCCTaGGGAGAAAGTAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTPASRS*GESRIS
Trigger: TGAGATCCTACTTTCTCCCCAGGACCTGGAGGCAGG...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264661.4
CDS-3UTR TCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTTGCAGGTCTTCTGCATaGCCTCGGTGCGACCGTAGC +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGCRSSA*PRCDRS
Trigger: GCTACGGTCGCACCGAGGTCATGCAGAAGACCTGCA...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGGGTGTGTCGCGAAGTaGTGGGGGTGTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEGCVAK*WGCHRH
Trigger: GTGACGATGACACCCCCATCACTTCGCGACACACCC...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTGGGTGTGTCGCGAAGTaGTGGGGGTGTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGGCVAK*WGCHRH
Trigger: GTGACGATGACACCCCCATCACTTCGCGACACACCC...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGCGCAGAACGAGGTCTTaGTGTGCAGCGATAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGERRTRS*CAAIGP
Trigger: GGGCCCTATCGCTGCACATCAAGACCTCGTTCTGCG...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCGCAGAACGAGGTCTTaGTGTGCAGCGATAGGGCCC +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGRRTRS*CAAIGP
Trigger: GGGCCCTATCGCTGCACATCAAGACCTCGTTCTGCG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGGTCCTCCCTGAGTGGTaGGCGGCAGCGCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLVLPEW*AAAPTP
Trigger: TGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGAC...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCAGCTGCAGGTCTTCTaGATGACCTCGGTGCGACCG +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGQLQVF*MTSVRP
Trigger: CGGTCGCACCGAGGTCATGCAGAAGACCTGCAGCTG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGGCCCGGTGCTCCTGGTaGCCCTCCAGGGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEARCSW*PSRALC
Trigger: GCACAAAGCCCTGGAGGGCCACCAGGAGCACCGGGC...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTCAGCCCGGTGCTCCTaGTGGCCCTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPSARCS*WPSRAL
Trigger: CAAAGCCCTGGAGGGCCACCAGGAGCACCGGGCTGA...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGGCCTTCATGCCTCCCTaGCCCCGGCGGCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEAFMPP*PRRPKW
Trigger: CCACTTTGGCCGCCGGGGCCAGGGAGGCATGAAGGC...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCTGGTGTCAGAGCCCTaGCGCAGGTTGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGLVSEP*RRLKVR
Trigger: CCTCACCTTCAACCTGCGCCAGGGCTCTGACACCAG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACAGCCTCCAGGTCCTGGGGAGGCCCCGAGGCCGTGCTaGGCTGAGGTTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VASSRRDHLERQPPGPGEAPRPC*AEVGQQ
Trigger: CTGCTGCCCAACCTCAGCCCAGCACGGCCTCGGGGC...CTCCCCAGGACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGGCTTGGCAGCGGTCTaGGGTCAGGGAAAGGATAGG +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEGLAAV*GQGKDR
Trigger: CCTATCCTTTCCCTGACCCCAGACCGCTGCCAAGCC...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTGACCTGGGCGAGTTTTaGAGCAGTCCAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGDLGEF*SSPGPE
Trigger: CTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTC...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTGAGCCCAGGGTGTTaGGTGGTAGAGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEVSPGC*VVEESW
Trigger: CCAGCTCTCCTCTACCACCCAACACCCTGGGCTCAC...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCCTGCAGCAGGCCCATaGTGTGCCGCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHPAAGP*CAAAPG
Trigger: GCCGGGAGCTGCGGCACATCATGGGCCTGCTGCAGG...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGTACCGCTCCAGCTTCTaGAGCAGCCGCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEYRSSF*SSRSSR
Trigger: GCGGCTGCTGCGGCTGCTGCAGAAGCTGGAGCGGTA...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGCAGCCCAATGGGCACTaGGGTTCATCTCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEQPNGH*GSSHAC
Trigger: GCAGGCATGAGATGAACCGCAGTGCCCATTGGGCTG...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGTGGCTCACTGGTCTCTaGGCCGTAGAGGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEWLTGL*AVEETA
Trigger: TGCCGTTTCCTCTACGGCCCAGAGACCAGTGAGCCA...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTTCCCCGCGGCCTCCTTaGGGGCCAAGTCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTSPRPP*GPSPGL
Trigger: AAGCCCAGGACTTGGCCCCCAAGGAGGCCGCGGGGA...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGATGCAGGCCATCCAGTaGGCAAGGAGCGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEMQAIQ*ARSAKT
Trigger: GGTCTTTGCGCTCCTTGCCCACTGGATGGCCTGCAT...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGAGAGCAGCGGGTCATTaGCCTCCATCTCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSERAAGH*PPSPGA
Trigger: GGCGCCGGGAGATGGAGGCCAATGACCCGCTGCTCT...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTACGGCCCACGTGGTCTaGAAGTATTCGAGCATGCGC +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGTAHVV*KYSSMR
Trigger: GCGCATGCTCGAATACTTCCAGACCACGTGGGCCGT...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGCAAGCGTAGTATCCTaGAGGCTGGGTGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEASVVS*RLGGGL
Trigger: CAGACCACCACCCAGCCTCCAGGATACTACGCTTGC...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCCATGGTCCCCACACTaGCTGGGCAGTGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGPWSPH*LGSELQ
Trigger: CTGAAGTTCACTGCCCAGCCAGTGTGGGGACCATGG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGGAGAGCTGGAGACCTaGGCGAGTTTTGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEGELET*ASFGAV
Trigger: GACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCC...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGCGTCGATGCCGCTGTTaGCGGCCCACGTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRRRCRC*RPTWSG
Trigger: TCCAGACCACGTGGGCCGTCAACAGCGGCATCGACG...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGGCAGCGTCTTGTCTaGGGAGGAGCCGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPWQRLV*GGAEAF
Trigger: GAAAGCCTCGGCTCCTCCTCAGACAAGACGCTGCCA...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCCACTATCCGGGGACTaGGGTCCGGAGGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEPLSGD*GPEVQR
Trigger: CCTTTGGACCTCCGGACCTCAGTCCCCGGATAGTGG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGAGTCCAGGCCCTGAGTaGGACCATGTTGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGESPGPE*DHVVMG
Trigger: CCCCATTACAACATGGTCTCACTCAGGGCCTGGACT...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATTCCCCTCCCTCTTACTaGCGCTGCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHSPPSY*RCRCRC
Trigger: GCAGCGGCAGCGGCAGCGGCAGTAAGAGGGAGGGGA...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264661.4
CDS-3UTR GCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCGCTTGCCCAACTCATaGAACCAGCCAATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGRLPNS*NQPMSQ
Trigger: CTGGGACATTGGCTGGTTGCATGAGTTGGGCAAGCG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCGGCTCAGGGATATCTaGTCCAATCAGGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGRLRDI*SNQVPL
Trigger: AAGGGGGACCTGATTGGAGCAGATATCCCTGAGCCG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTTGCCAGAGTCCTCAATaGCATCCACTATCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGCQSPQ*HPLSGD
Trigger: GTCCCCGGATAGTGGATGGCATTGAGGACTCTGGCA...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATTCCCCGCGGCCTCCTTaGGGGCCAAGTCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHSPRPP*GPSPGL
Trigger: AAGCCCAGGACTTGGCCCCCAAGGAGGCCGCGGGGA...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCAGTCCCTGTCTCCATaGTCCCCACACTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEQSLSP*SPHWLG
Trigger: GCCCAGCCAGTGTGGGGACCATGGAGACAGGGACTG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGTCCACAGCCCTCAGGTaGCTCCCCTCACAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLSTALR*LPSQRG
Trigger: CCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGA...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTGTGGTAGAGGAGAGCTaGAGACCTGGGCGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGVVEES*RPGRVL
Trigger: CAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCAC...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCCATTGTAGGGGACGGTaGCCGCAACGTAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPHCRGR*PQRRRW
Trigger: CCACCTTCTACGTTGCGGTCACCGTCCCCTACAATG...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGTCTCCCGGCGCCCGATaGCATACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRSPGAR*HTRCRP
Trigger: TGGCCTGCATCTGGTATGTCATCGGGCGCCGGGAGA...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTTCAGTGGAACGTGTCTaGCCTGGACTGGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGSVERV*PGLETV
Trigger: CACAGTTTCCAGTCCAGGTCAGACACGTTCCACTGA...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCCAGAAGAGACCACCTTaGGAGACAGCCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPQKRPP*ETASRS
Trigger: GGACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTG...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS-3UTR GCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGTGGGAAAGCCCCGTGTaGCCTGTGCGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRWESPV*PVRWPA
Trigger: TGCTGGCCAACGCACAGGGCACACGGGGCTTTCCCA...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCAGCTGCAGGTCTTCTaGATGACCTCGGTGCGACCG +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEQLQVF*MTSVRP
Trigger: CGGTCGCACCGAGGTCATGCAGAAGACCTGCAGCTG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGAGCAGGCCCATGATGTaGCGCAGCTCCCGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRSRPMM*RSSRLS
Trigger: GCTTAGCCGGGAGCTGCGGCACATCATGGGCCTGCT...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCTGGACTGGAAACTGTaGCTCAAGAGGCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGLDWKL*LKRLGV
Trigger: AACCCCAAGCCTCTTGAGGCACAGTTTCCAGTCCAG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCGGAGCAGTAGACGATaGGAAAGCCCCGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSERSSRR*ESPVCP
Trigger: AGGGCACACGGGGCTTTCCCATCGTCTACTGCTCCG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCTCACTGGCCAATTCTaGGCTGGGCCTGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSELTGQF*AGPGPC
Trigger: ACAGGGACCAGGCCCAGCCCAGAATTGGCCAGTGAG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGATCCTGGAGGCTGGGTaGTGGTCTGGACGCACAAGG +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEILEAG*WSGRTR
Trigger: CCTTGTGCGTCCAGACCACCACCCAGCCTCCAGGAT...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCTGGGCCAGGGTCAGTaGAACGTGTCTGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSELGQGQ*NVSDLD
Trigger: GTCCAGGTCAGACACGTTCCACTGACCCTGGCCCAG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATGGGGGAGAACAGGCTTaGCAGCGGTCTGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHGGEQA*QRSGVR
Trigger: CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCC...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATTCTCCCGGCGCCCGATaGCATACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHSPGAR*HTRCRP
Trigger: TGGCCTGCATCTGGTATGTCATCGGGCGCCGGGAGA...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATGGAGCCGAGGCTTTCTaGGCGGGGCTGGGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHGAEAF*AGLGEA
Trigger: CGCCTCTCCCAGCCCCGCTCAGAAAGCCTCGGCTCC...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCAGATTTCAGCCCGGTaGTCCTGGTGGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHQISAR*SWWPSR
Trigger: CCTGGAGGGCCACCAGGAGCACCGGGCTGAAATCTG...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTCCGAACACCACAGCGTaGATCAGGGCGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTPNTTA*IRAPMS
Trigger: GCTCATAGGCGCCCTGATGCACGCTGTGGTGTTCGG...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACAGCCTCCAGGTCCTGGGGAGCCGAACACCACAGCGTaGATCAGGGCGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: VASSRRDHLERQPPGPGEPNTTA*IRAPMS
Trigger: GCTCATAGGCGCCCTGATGCACGCTGTGGTGTTCGG...CTCCCCAGGACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS-3UTR GCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCCGAACAACGGCAGCTaGAGGATCTCCCGATTCAGG +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEPNNGS*RISRFR
Trigger: CCTGAATCGGGAGATCCTGCAGCTGCCGTTGTTCGG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCTGCGGTTCATCTCATaGCTGCTGGGTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSELRFIS*LLGSTA
Trigger: GGCTGTGGAACCCAGCAGGCATGAGATGAACCGCAG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACATGGCCCCGGGGCGTaGGTTCAAGGCGCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRHGPGA*VQGAAL
Trigger: CAGCGCCGCGCCTTGAACCCACGCCCCGGGGCCATG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTCATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGGTAGTGGAGGCCAATaGAACGAGGAGCAGAGATTA +
Preference number: 4 (lower is better)
Translates to: LMPAGFHSPQVAPLTEGEGSGGQ*NEEQRL
Trigger: TAATCTCTGCTCCTCGTTCCATTGGCCTCCACTACC...CTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGGACCTGGGCGAGTTTTaGAGCAGTCCAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLDLGEF*SSPGPE
Trigger: CTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTC...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGACCACAGCACTGCACTaGGAGTACCGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLTTALH*EYRSSF
Trigger: GAAGCTGGAGCGGTACTCTCAGTGCAGTGCTGTGGT...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCATCAGGGCGCCTATaGGCATCGTGCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTASGRL*ASCRWR
Trigger: TCTCCATCTGCACGATGCTCATAGGCGCCCTGATGC...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACAGCCTCCAGGTCCTGGGGAGGCATCAGGGCGCCTATaGGCATCGTGCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: VASSRRDHLERQPPGPGEASGRL*ASCRWR
Trigger: TCTCCATCTGCACGATGCTCATAGGCGCCCTGATGC...CTCCCCAGGACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS-3UTR TCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGAGTCCAGGCCCTGAGTaGGACCATGTTGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSESPGPE*DHVVMG
Trigger: CCCCATTACAACATGGTCTCACTCAGGGCCTGGACT...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACGCTGCCGCTGCCGCTaGCTCTGCTCCGAACCCCGT +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRRCRCR*LCSEPR
Trigger: ACGGGGTTCGGAGCAGAGGCAGCGGCAGCGGCAGCG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264661.4
CDS-3UTR GCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATGCTTTGTGCAGACGCTaGAGGGCTGGCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHALCRR*RAGSLV
Trigger: GACCAGTGAGCCAGCCCTGCAGCGTCTGCACAAAGC...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATTATTATTGGCCTTCATaGCTCCCTGGCCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHYYWPS*LPGPGG
Trigger: GCCGCCGGGGCCAGGGAGGCATGAAGGCCAATAATA...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCACCTCCAGACGCTTaGCCAACTCATGCAACCAGC +
Preference number: 4 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTAPPDA*PTHATS
Trigger: GCTGGTTGCATGAGTTGGGCAAGCGTCTGGAGGTGC...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGAACGAGGTCTTGATGTaGAGCGATAGGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLNEVLM*SDRARR
Trigger: CCTGCGGGCCCTATCGCTGCACATCAAGACCTCGTT...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACAGCCTCCAGGTCCTGGGGAGCACGAAGTTTGGGTCTaGTCCCAACCCAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VASSRRDHLERQPPGPGEHEVWV*SQPRLL
Trigger: CAGGAGCCTGGGTTGGGAGCAGACCCAAACTTCGTG...CTCCCCAGGACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS-3UTR GCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGGGGCCTCAGCTGTGCTaGCAGAGTCCTCAATGCCAT +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLGPQLC*QSPQCH
Trigger: ATGGCATTGAGGACTCTGGCAGCACAGCTGAGGCCC...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGAAGGGGCCTCAGCTGTaGTGCCAGAGTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLKGPQL*CQSPQC
Trigger: GCATTGAGGACTCTGGCAGCACAGCTGAGGCCCCTT...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGGGTTCATCTCATGCCTaGTGGGTTCCACAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEGSSHA*WVPQPS
Trigger: TGAGGGCTGTGGAACCCAGCAGGCATGAGATGAACC...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTACGGCTCCGTCTTCTaGCAGACCGAAATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPYGSVF*QTEISR
Trigger: CCTGGAAATTTCGGTCTGCCAGAAGACGGAGCCGTA...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGTCTCCGCGTCGGTGTTaGCACACACGTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRSPRRC*HTRCQS
Trigger: GCTTTGGCAACGTGTGTGCCAACACCGACGCGGAGA...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCCCTGTAGGGGGCGCCTaGGAGCGGGGCCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: EFISYPKVSPGCWVVEESPVGGA*ERGLGS
Trigger: ACTGCCAAGGCCCCGCTCCCAGGCGCCCCCTACAGG...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTCACTGGCCAATTCTaGGCTGGGCCTGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHLTGQF*AGPGPC
Trigger: ACAGGGACCAGGCCCAGCCCAGAATTGGCCAGTGAG...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACCAAGCGGAGCCTGCTaGGTGGCCTGGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRPSGAC*VAWGTQ
Trigger: CTGGGTCCCCCAGGCCACCCAGCAGGCTCCGCTTGG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATTGGTGGCCTCAGCTGTaGACAAGGAGGGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHWWPQL*TRRVWG
Trigger: ACCCCAGACCCTCCTTGTCCACAGCTGAGGCCACCA...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGCCATGGTCCCCACACTaGCTGGGCAGTGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLPWSPH*LGSELQ
Trigger: CTGAAGTTCACTGCCCAGCCAGTGTGGGGACCATGG...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCGGAACGTGTCTGACCTaGACTGGAAACTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPGTCLT*TGNCAS
Trigger: TGAGGCACAGTTTCCAGTCCAGGTCAGACACGTTCC...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTGGGCCAGGGTCAGTaGAACGTGTCTGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHLGQGQ*NVSDLD
Trigger: GTCCAGGTCAGACACGTTCCACTGACCCTGGCCCAG...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGATCTGCCCAGCCCAATaGGCACTGCGGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEICPAQ*ALRFIS
Trigger: TGAGATGAACCGCAGTGCCCATTGGGCTGGGCAGAT...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAACCTGCAGCAGGCCCATaGTGTGCCGCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEPAAGP*CAAAPG
Trigger: GCCGGGAGCTGCGGCACATCATGGGCCTGCTGCAGG...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACACTGGCTGGGCAGTaGACTTCAGCAAGCGTAGTA +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSETLAGQ*TSASVV
Trigger: TACTACGCTTGCTGAAGTTCACTGCCCAGCCAGTGT...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGTGCCAGAGTCCTCAATaGCATCCACTATCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLCQSPQ*HPLSGD
Trigger: GTCCCCGGATAGTGGATGGCATTGAGGACTCTGGCA...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTGCGGTTCATCTCATaGCTGCTGGGTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHLRFIS*LLGSTA
Trigger: GGCTGTGGAACCCAGCAGGCATGAGATGAACCGCAG...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCAGCCCAATGGGCACTaGGGTTCATCTCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHQPNGH*GSSHAC
Trigger: GCAGGCATGAGATGAACCGCAGTGCCCATTGGGCTG...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCCCCCGGCGGCCAAAGTaGCCGGTCAGTCGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: EFISYPKVSPGCWVVEESPRRPK*PVSRCR
Trigger: CCTACACCGACTGACCGGCCACTTTGGCCGCCGGGG...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACCCCGGCGGCCAAAGTaGCCGGTCAGTCGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRPRRPK*PVSRCR
Trigger: CCTACACCGACTGACCGGCCACTTTGGCCGCCGGGG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATTCTCCGCGTCGGTGTTaGCACACACGTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHSPRRC*HTRCQS
Trigger: GCTTTGGCAACGTGTGTGCCAACACCGACGCGGAGA...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGGCACTGTGGCCCTaGCCAGCCAGGGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEEALWP*PARAGD
Trigger: GTCCCCTGCCCTGGCTGGCCAGGGCCACAGTGCCTC...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAACCAAGCGGAGCCTGCTaGGTGGCCTGGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEPSGAC*VAWGTQ
Trigger: CTGGGTCCCCCAGGCCACCCAGCAGGCTCCGCTTGG...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGATGCGACCGTAGCCTGTaGGCTCGCAGAAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRCDRSL*ARRSRR
Trigger: CCGACGGCTTCTGCGAGCTCACAGGCTACGGTCGCA...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCCTGGGCTTCCACTCTaGGTGATATCCTTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSEPGLPL*VISLKE
Trigger: TTCCTTCAAGGATATCACTCAGAGTGGAAGCCCAGG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTCTTGTACTCGGGCACTaGTGGCTTTGGCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTLVLGH*WLWLKH
Trigger: GTGTTTGAGCCAAAGCCATCAGTGCCCGAGTACAAG...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGCTTGTACTCGGGCACTaGTGGCTTTGGCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRLVLGH*WLWLKH
Trigger: GTGTTTGAGCCAAAGCCATCAGTGCCCGAGTACAAG...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATCGCCCACCGAGCCATTaGCATAGGGCACCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHRPPSH*HRAPPD
Trigger: GTCTGGAGGTGCCCTATGTCAATGGCTCGGTGGGCG...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGGAGACACCTCCTGATTaGGACGAGAGATCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLETPPD*DERSPG
Trigger: ACCAGGAGATCTCTCGTCTCAATCAGGAGGTGTCTC...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTGGCCCAGGTCCTCCCTaGGTGGTGAGCGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSGPGPP*VVSGSA
Trigger: GGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCC...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGTTTCCTATCCAAAAGTaGGCCCAGGGTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLFPIQK*AQGVGW
Trigger: CCACCCAACACCCTGGGCTCACTTTTGGATAGGAAA...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACGCTGCCGCTGCCTCTaGTCCGAACCCCGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRRCRCL*SEPRSS
Trigger: AGAGCTACGGGGTTCGGAGCAGAGGCAGCGGCAGCG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264661.4
CDS-3UTR GCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATGCAGACATAGTAATGTaGCTGCAGGGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHADIVM*LQGIPT
Trigger: CGTGGGGATGCCCTGCAGGCACATTACTATGTCTGC...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAATTCAAGGCGCGGCGCTaGGGAGCTTTCAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEFKARR*GAFSAA
Trigger: GGCCGCGCTGAAAGCTCCCCAGCGCCGCGCCTTGAA...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp TGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTGTGTGCCCTGTGCGTTaGCCAGCAGGAAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WGESRISSAQPNGHCGSSVCPVR*PAGSCC
Trigger: ACAGCAACTTCCTGCTGGCCAACGCACAGGGCACAC...AGATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTTACGGCTCCGTCTTCTaGCAGACCGAAATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTYGSVF*QTEISR
Trigger: CCTGGAAATTTCGGTCTGCCAGAAGACGGAGCCGTA...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGAGACGAGAGATCTCCTaGTTCAGCCGGCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: RGELETWASFGAVQALSERREIS*FSRQTF
Trigger: AAAGGTTTGCCGGCTGAACCAGGAGATCTCTCGTCT...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTGGACAAGGAGGGTCTaGGGTCCAAGCGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHWTRRV*GPSGAC
Trigger: GCAGGCTCCGCTTGGACCCCAGACCCTCCTTGTCCA...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGGTGTCTGACCTGGACTaGAAACTGTGCCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRVSDLD*KLCLKR
Trigger: CCTCTTGAGGCACAGTTTCCAGTCCAGGTCAGACAC...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATTCATCTCATGCCTGCTaGGTTCCACAGCCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHSSHAC*VPQPSG
Trigger: ACCTGAGGGCTGTGGAACCCAGCAGGCATGAGATGA...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATGTGGTAGAGGAGAGCTaGAGACCTGGGCGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHVVEES*RPGRVL
Trigger: CAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCAC...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACTGCGACCGTAGCCTGTaGGCTCGCAGAAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDCDRSL*ARRSRR
Trigger: CCGACGGCTTCTGCGAGCTCACAGGCTACGGTCGCA...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTCCTGGGCTTCCACTCTaGGTGATATCCTTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTPGLPL*VISLKE
Trigger: TTCCTTCAAGGATATCACTCAGAGTGGAAGCCCAGG...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACCGTCGATGCCGCTGTTaGCGGCCCACGTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDRRCRC*RPTWSG
Trigger: TCCAGACCACGTGGGCCGTCAACAGCGGCATCGACG...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATGCTTTGTGCAGACGCTaGAGGGCTGGCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHALCRR*RAGSLV
Trigger: GACCAGTGAGCCAGCCCTGCAGCGTCTGCACAAAGC...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACCCCTCCAGGGCTTTGTaGAGACGCTGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDPSRAL*RRCRAG
Trigger: GCCAGCCCTGCAGCGTCTGCACAAAGCCCTGGAGGG...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGGCCGCGGCAGGCGGTaGACACGGATGAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEGRGRR*TRMKSL
Trigger: CAAGGACTTCATCCGTGTGCACCGCCTGCCGCGGCC...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGATATTCGAGCATGCGCTaGTTGAGCGGCCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRYSSMR*LSGRGR
Trigger: CCTGCCGCGGCCGCTCAAGCAGCGCATGCTCGAATA...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp TGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTGCAGACATAGTAATGTaGCTGCAGGGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: WGESRISSAQPNGHCGSSADIVM*LQGIPT
Trigger: CGTGGGGATGCCCTGCAGGCACATTACTATGTCTGC...AGATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATCGGAGCAGTAGACGATaGGAAAGCCCCGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHRSSRR*ESPVCP
Trigger: AGGGCACACGGGGCTTTCCCATCGTCTACTGCTCCG...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGCAGGGCTGGCTCACTaGTCTCTGGGCCGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRAGLAH*SLGRRG
Trigger: TCCTCTACGGCCCAGAGACCAGTGAGCCAGCCCTGC...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACCTCCTCAGCCTCACTaGCCAATTCTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRPPQPH*PILGWA
Trigger: GGCCCAGCCCAGAATTGGCCAGTGAGGCTGAGGAGG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCGGCTGGGTGGTGGTCTaGACGCACAAGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: EFISYPKVSPGCWVVEESGWVVV*THKERG
Trigger: GCCTCTCTCCTTGTGCGTCCAGACCACCACCCAGCC...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATGTGTCTGACCTGGACTaGAAACTGTGCCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHVSDLD*KLCLKR
Trigger: CCTCTTGAGGCACAGTTTCCAGTCCAGGTCAGACAC...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATGTGAGCCCAGGGTGTTaGGTGGTAGAGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHVSPGC*VVEESW
Trigger: CCAGCTCTCCTCTACCACCCAACACCCTGGGCTCAC...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCGGAGCCGAGGCTTTCTaGGCGGGGCTGGGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIGAEAF*AGLGEA
Trigger: CGCCTCTCCCAGCCCCGCTCAGAAAGCCTCGGCTCC...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATCCTGCTGAATCGGAATaGAGGGGCCTCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHPAESE*RGLSCA
Trigger: AGCACAGCTGAGGCCCCTTCATTCCGATTCAGCAGG...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp TGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTGAGCAGTCCAGGCCCTaGGTGAGACCATGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: WGESRISSAQPNGHCGSSEQSRP*VRPCCN
Trigger: ATTACAACATGGTCTCACTCAGGGCCTGGACTGCTC...AGATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGCCCCGTGTGCCCTGTaGGTTGGCCAGCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEAPCAL*VGQQEV
Trigger: AACTTCCTGCTGGCCAACGCACAGGGCACACGGGGC...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACTATTCGAGCATGCGCTaGTTGAGCGGCCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDYSSMR*LSGRGR
Trigger: CCTGCCGCGGCCGCTCAAGCAGCGCATGCTCGAATA...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAACCCAACCCAGGCTCCTaGCCCGGCTCAGGGATATCT +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEPNPGS*PGSGIS
Trigger: AGATATCCCTGAGCCGGGGCAGGAGCCTGGGTTGGG...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAAGCAGGCCCATGATGTaGCGCAGCTCCCGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAESRPMM*RSSRLS
Trigger: GCTTAGCCGGGAGCTGCGGCACATCATGGGCCTGCT...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATGGTAGTGGAGGCCAATaGAACGAGGAGCAGAGATTA +
Preference number: 4 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHGSGGQ*NEEQRL
Trigger: TAATCTCTGCTCCTCGTTCCATTGGCCTCCACTACC...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACTGGTGTCAGAGCCCTaGCGCAGGTTGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRLVSEP*RRLKVR
Trigger: CCTCACCTTCAACCTGCGCCAGGGCTCTGACACCAG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGGCTGGGTGGTGGTCTaGACGCACAAGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEGWVVV*THKERG
Trigger: GCCTCTCTCCTTGTGCGTCCAGACCACCACCCAGCC...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACTGGAGGCTGGGTGGTaGTCTGGACGCACAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRLEAGW*SGRTRR
Trigger: TCTCCTTGTGCGTCCAGACCACCACCCAGCCTCCAG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAAACCAGGCCAGCTGGTaGCTGCTGACCCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAENQASW*LLTPRQ
Trigger: CTGCCTTGGGGTCAGCAGCCACCAGCTGGCCTGGTT...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACTGCAGGTCTTCTGCATaGCCTCGGTGCGACCGTAGC +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDCRSSA*PRCDRS
Trigger: GCTACGGTCGCACCGAGGTCATGCAGAAGACCTGCA...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAATGGCAGCGTCTTGTCTaGGGAGGAGCCGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEWQRLV*GGAEAF
Trigger: GAAAGCCTCGGCTCCTCCTCAGACAAGACGCTGCCA...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACACTCTCGGCCTCTGTaGTGGATGGCAGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRHSRPL*WMAASC
Trigger: ACAAGACGCTGCCATCCATCACAGAGGCCGAGAGTG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGTTCAGGCCTCCTGCTaGATCGGAATGAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRVQASC*IGMKGP
Trigger: AGGCCCCTTCATTCCGATTCAGCAGGAGGCCTGAAC...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGCTGGTGGCTGCTaGCCCCAAGGCAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSPAGGC*PQGRKP
Trigger: TGGCTTCCTGCCTTGGGGTCAGCAGCCACCAGCTGG...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGTGCTGTTGGGATTTTTaGGTTGCTAGCAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LETWASFGAVQALSETMLCCWDF*VASSRR
Trigger: TCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCA...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGCACCTCCAGACGCTTaGCCAACTCATGCAACCAGC +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRAPPDA*PTHATS
Trigger: GCTGGTTGCATGAGTTGGGCAAGCGTCTGGAGGTGC...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTTCAGCCCGGTGCTCCTaGTGGCCCTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSSARCS*WPSRAL
Trigger: CAAAGCCCTGGAGGGCCACCAGGAGCACCGGGCTGA...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACGTCCCAGATGGCCTTaGAGACGCTGTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRRPRWP*RRCSGG
Trigger: TCCTCCACTACAGCGTCTCCAAGGCCATCTGGGACG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAATGCAGGCCATCCAGTaGGCAAGGAGCGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRMQAIQ*ARSAKT
Trigger: GGTCTTTGCGCTCCTTGCCCACTGGATGGCCTGCAT...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACTGGTGGCCTCAGCTGTaGACAAGGAGGGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDWWPQL*TRRVWG
Trigger: ACCCCAGACCCTCCTTGTCCACAGCTGAGGCCACCA...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGGTCCCCACACTGGCTaGGCAGTGAACTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRGPHTG*AVNFSK
Trigger: CTTGCTGAAGTTCACTGCCCAGCCAGTGTGGGGACC...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACCATTGTAGGGGACGGTaGCCGCAACGTAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDHCRGR*PQRRRW
Trigger: CCACCTTCTACGTTGCGGTCACCGTCCCCTACAATG...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCGCCCACCGAGCCATTaGCATAGGGCACCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSRPPSH*HRAPPD
Trigger: GTCTGGAGGTGCCCTATGTCAATGGCTCGGTGGGCG...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACCACTCTCGGCCTCTGTaGTGGATGGCAGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDHSRPL*WMAASC
Trigger: ACAAGACGCTGCCATCCATCACAGAGGCCGAGAGTG...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACGTTCAGGCCTCCTGCTaGATCGGAATGAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDVQASC*IGMKGP
Trigger: AGGCCCCTTCATTCCGATTCAGCAGGAGGCCTGAAC...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATACACTGGCTGGGCAGTaGACTTCAGCAAGCGTAGTA +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHTLAGQ*TSASVV
Trigger: TACTACGCTTGCTGAAGTTCACTGCCCAGCCAGTGT...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTCAGTGGAACGTGTCTaGCCTGGACTGGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHSVERV*PGLETV
Trigger: CACAGTTTCCAGTCCAGGTCAGACACGTTCCACTGA...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAACAGAAGAGACCACCTTaGGAGACAGCCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEQKRPP*ETACLQ
Trigger: CTGGAGGCAGGCTGTCTCTCAAGGTGGTCTCTTCTG...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264661.4
CDS-3UTR GCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAACTGTCTTCAGTAGGTaGACCAGCGAGGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRTVFSR*TSEVTV
Trigger: CACCGTGACCTCGCTGGTGCACCTACTGAAGACAGT...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACGCTTGCCCAACTCATaGAACCAGCCAATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRRLPNS*NQPMSQ
Trigger: CTGGGACATTGGCTGGTTGCATGAGTTGGGCAAGCG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAAACGAGGTCTTGATGTaGAGCGATAGGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAENEVLM*SDRARR
Trigger: CCTGCGGGCCCTATCGCTGCACATCAAGACCTCGTT...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCCGGCTCAGGGATATCTaGTCCAATCAGGTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: EFISYPKVSPGCWVVEESRLRDI*SNQVPL
Trigger: AAGGGGGACCTGATTGGAGCAGATATCCCTGAGCCG...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACCACGAAGTTTGGGTCTaGTCCCAACCCAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDHEVWV*SQPRLL
Trigger: CAGGAGCCTGGGTTGGGAGCAGACCCAAACTTCGTG...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGGTTCATCTCATGCCTaGTGGGTTCCACAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRGSSHA*WVPQPS
Trigger: TGAGGGCTGTGGAACCCAGCAGGCATGAGATGAACC...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACTGGCTCACTGGTCTCTaGGCCGTAGAGGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDWLTGL*AVEETA
Trigger: TGCCGTTTCCTCTACGGCCCAGAGACCAGTGAGCCA...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGATTGGGGGCCAAGTCCTaGGCTTCCACTCTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRLGAKS*ASTLSD
Trigger: ATCACTCAGAGTGGAAGCCCAGGACTTGGCCCCCAA...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCAGAGCAGCGGGTCATTaGCCTCCATCTCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIRAAGH*PPSPGA
Trigger: GGCGCCGGGAGATGGAGGCCAATGACCCGCTGCTCT...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACACGGCCCACGTGGTCTaGAAGTATTCGAGCATGCGC +
Preference number: 4 (lower is better)
Translates to: SAVGIFELLAAEETTLRDTAHVV*KYSSMR
Trigger: GCGCATGCTCGAATACTTCCAGACCACGTGGGCCGT...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGCTTTCACATCAGCACTaGTCTTTAGCACGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRLSHQH*SLARSL
Trigger: CAAACTTCGTGCTAAAGACCAGTGCTGATGTGAAAG...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGGTCCCCACACTGGCTaGGCAGTGAACTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEGPHTG*AVNFSK
Trigger: CTTGCTGAAGTTCACTGCCCAGCCAGTGTGGGGACC...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCCCACTATCCGGGGACTaGGGTCCGGAGGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIPLSGD*GPEVQR
Trigger: CCTTTGGACCTCCGGACCTCAGTCCCCGGATAGTGG...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCGAGCAGTCCAGGCCCTaGGTGAGACCATGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: EFISYPKVSPGCWVVEESEQSRP*VRPCCN
Trigger: ATTACAACATGGTCTCACTCAGGGCCTGGACTGCTC...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGACTGGACTGGAAACTGTaGCTCAAGAGGCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRLDWKL*LKRLGV
Trigger: AACCCCAAGCCTCTTGAGGCACAGTTTCCAGTCCAG...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCGCAGGGCTGGCTCACTaGTCTCTGGGCCGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIAGLAH*SLGRRG
Trigger: TCCTCTACGGCCCAGAGACCAGTGAGCCAGCCCTGC...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGATCCAAAGGTTCCCAGTaGGGGAATGAGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSAVGIFELLAAEETTLRSKGSQ*GNEKLR
Trigger: CCTCAGCTTCTCATTCCCCCACTGGGAACCTTTGGA...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCCCTCCTCAGCCTCACTaGCCAATTCTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIPPQPH*PILGWA
Trigger: GGCCCAGCCCAGAATTGGCCAGTGAGGCTGAGGAGG...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCTGGACAAGGAGGGTCTaGGGTCCAAGCGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIWTRRV*GPSGAC
Trigger: GCAGGCTCCGCTTGGACCCCAGACCCTCCTTGTCCA...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTGGCTTGGCAGCGGTCTaGGGTCAGGGAAAGGATAGG +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSGLAAV*GQGKDR
Trigger: CCTATCCTTTCCCTGACCCCAGACCGCTGCCAAGCC...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTACCACAGCACTGCACTaGGAGTACCGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSTTALH*EYRSSF
Trigger: GAAGCTGGAGCGGTACTCTCAGTGCAGTGCTGTGGT...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCTGCTGAATCGGAATaGAGGGGCCTCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSPAESE*RGLSCA
Trigger: AGCACAGCTGAGGCCCCTTCATTCCGATTCAGCAGG...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR TCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACACCTCCTGATTaGGACGAGAGATCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAEETPPD*DERSPG
Trigger: ACCAGGAGATCTCTCGTCTCAATCAGGAGGTGTCTC...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCAGGCTGAGCCATCCTTaGGGTAGAAGCAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: EFISYPKVSPGCWVVEESRLSHP*GRSRFQ
Trigger: CTGAAATCTGCTTCTACCGCAAGGATGGCTCAGCCT...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTGGGCCTCAGCTGTGCTaGCAGAGTCCTCAATGCCAT +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSGPQLC*QSPQCH
Trigger: ATGGCATTGAGGACTCTGGCAGCACAGCTGAGGCCC...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATCAAACACGTTATTATTaGCCTTCATGCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHQTRYY*PSCLPG
Trigger: GCCAGGGAGGCATGAAGGCCAATAATAACGTGTTTG...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCGTCCCAGATGGCCTTaGAGACGCTGTAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSRPRWP*RRCSGG
Trigger: TCCTCCACTACAGCGTCTCCAAGGCCATCTGGGACG...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCATCCTGGAGGCTGGGTaGTGGTCTGGACGCACAAGG +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIILEAG*WSGRTR
Trigger: CCTTGTGCGTCCAGACCACCACCCAGCCTCCAGGAT...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTGGAGAGCTGGAGACCTaGGCGAGTTTTGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSGELET*ASFGAV
Trigger: GACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCC...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
3UTR CAA 72 bp AGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTaGCTAGCAGCAGAAGAGACCACCTTGAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: RERIGSAVGIFE*LAAEETTLRDS
Trigger: GCTGTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCCCGAACAACGGCAGCTaGAGGATCTCCCGATTCAGG +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIPNNGS*RISRFR
Trigger: CCTGAATCGGGAGATCCTGCAGCTGCCGTTGTTCGG...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAAGACGAGAGATCTCCTaGTTCAGCCGGCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: VRERIGSAVGIFELLAAERREIS*FSRQTF
Trigger: AAAGGTTTGCCGGCTGAACCAGGAGATCTCTCGTCT...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCACTGTCTTCAGTAGGTaGACCAGCGAGGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEITVFSR*TSEVTV
Trigger: CACCGTGACCTCGCTGGTGCACCTACTGAAGACAGT...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCTTGGGGGCCAAGTCCTaGGCTTCCACTCTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEILGAKS*ASTLSD
Trigger: ATCACTCAGAGTGGAAGCCCAGGACTTGGCCCCCAA...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTTCCAAAGGTTCCCAGTaGGGGAATGAGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSSKGSQ*GNEKLR
Trigger: CCTCAGCTTCTCATTCCCCCACTGGGAACCTTTGGA...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCTCATCTCATGCCTGCTaGGTTCCACAGCCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEISSHAC*VPQPSG
Trigger: ACCTGAGGGCTGTGGAACCCAGCAGGCATGAGATGA...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCATCTGCCCAGCCCAATaGGCACTGCGGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIICPAQ*ALRFIS
Trigger: TGAGATGAACCGCAGTGCCCATTGGGCTGGGCAGAT...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTACAGCCTCCAGGTCCTaGGGAGAAAGTAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSTASRS*GESRIS
Trigger: TGAGATCCTACTTTCTCCCCAGGACCTGGAGGCTGT...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS-3UTR TCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCCCCCCATCTCATTCTTaGTGGGCATCATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIPPSHS*WASCPG
Trigger: TCCTGGACATGATGCCCATCAAGAATGAGATGGGGG...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCCTTTCACATCAGCACTaGTCTTTAGCACGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: EFISYPKVSPGCWVVEESLSHQH*SLARSL
Trigger: CAAACTTCGTGCTAAAGACCAGTGCTGATGTGAAAG...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR GCA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCAGGCTGAGCCATCCTTaGGGTAGAAGCAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIRLSHP*GRSRFQ
Trigger: CTGAAATCTGCTTCTACCGCAAGGATGGCTCAGCCT...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CCA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCAAACACGTTATTATTaGCCTTCATGCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSQTRYY*PSCLPG
Trigger: GCCAGGGAGGCATGAAGGCCAATAATAACGTGTTTG...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GCCAAGGGGCCCAGGTCCTCCCTGAGTGGTGAGCGGCAGCGCCCACCCCAGACAGAGCCCTGGCGCAGGTaGAAGGTGAGGTCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: AKGPRSSLSGERQRPPQTEPWRR*KVRSRG
Trigger: GCCCCGGGACCTCACCTTCAACCTGCGCCAGGGCTC...TGTCTGGGGTGGGCGCTGCCGCTCACCACTCAGGGAGGACCTGGGCCCCTTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTCCTGGGAGCGGGGCCTaGGCAGTTCAGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGPGSGA*AVQASC
Trigger: GCAGGAGGCCTGAACTGCCAAGGCCCCGCTCCCAGG...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTCGAGCATGCGCTGCTaGAGCGGCCGCGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPSSMRC*SGRGRR
Trigger: CCGCCTGCCGCGGCCGCTCAAGCAGCGCATGCTCGA...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS TCA 90 bp CCCCAGACAGGCCTGGGCCCTGGGCCAGGGTCAGTGGAACGTGTCTaGCCTGGACTGGAAACTGTGCCTCAAGAGGCTTGGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PQTGLGPGPGSVERV*PGLETVPQEAWGWG
Trigger: CCCCCAACCCCAAGCCTCTTGAGGCACAGTTTCCAGTCCAGGTCAGACACGTTCCACTGACCCTGGCCCAGGGCCCAGGCCTGTCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 90 bp CTGGAGGCTGGGTGGTGGTCTGGACGCACAAGGAGAGAGGCATGGTaGCCTCAGCTGTGGACAAGGAGGGTCTGGGGTCCAAGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: LEAGWWSGRTRREAW*PQLWTRRVWGPSGA
Trigger: GGCTCCGCTTGGACCCCAGACCCTCCTTGTCCACAGCTGAGGCCACCATGCCTCTCTCCTTGTGCGTCCAGACCACCACCCAGCCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGCCTGGGAGCGGGGCCTaGGCAGTTCAGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RGELETWASFGAVQALSEPGSGA*AVQASC
Trigger: GCAGGAGGCCTGAACTGCCAAGGCCCCGCTCCCAGG...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTAGTGAGCCCAGGGTGTaGGGTGGTAGAGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGSEPRV*GGRGEL
Trigger: CAGCTCTCCTCTACCACCCAACACCCTGGGCTCACT...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTTCACGCAGTAACTCGTaGGCGTCGATGCCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGSRSNS*ASMPLL
Trigger: CAACAGCGGCATCGACGCCAACGAGTTACTGCGTGA...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS GCA 90 bp CTGGGCCAGGGTCAGTGGAACGTGTCTGACCTGGACTGGAAACTGTaGCTCAAGAGGCTTGGGGTTGGGGGTGAGGCCTCTGGCACTGGA +
Preference number: 5 (lower is better)
Translates to: LGQGQWNVSDLDWKL*LKRLGVGGEASGTG
Trigger: TCCAGTGCCAGAGGCCTCACCCCCAACCCCAAGCCTCTTGAGGCACAGTTTCCAGTCCAGGTCAGACACGTTCCACTGACCCTGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTCCCACGGAGGCCACCTaGTACTCGGGCACTGATGGC +
Preference number: 5 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTPTEAT*YSGTDG
Trigger: GCCATCAGTGCCCGAGTACAAGGTGGCCTCCGTGGG...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCAGAGCAGCGGGTCATaGGCCTCCATCTCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHQSSGS*ASISRR
Trigger: GCGCCGGGAGATGGAGGCCAATGACCCGCTGCTCTG...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCGCGCAGAACGAGGTCTaGATGTGCAGCGATAGGGCC +
Preference number: 5 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPAQNEV*MCSDRA
Trigger: GGCCCTATCGCTGCACATCAAGACCTCGTTCTGCGC...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp TGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTGAGCCCTGGCGCAGGTaGAAGGTGAGGTCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: WGESRISSAQPNGHCGSSEPWRR*KVRSRG
Trigger: GCCCCGGGACCTCACCTTCAACCTGCGCCAGGGCTC...AGATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS TCA 90 bp AGGAGCGCAGTCCCTGTCTCCATGGTCCCCACACTGGCTGGGCAGTaGACTTCAGCAAGCGTAGTATCCTGGAGGCTGGGTGGTGGTCTG +
Preference number: 5 (lower is better)
Translates to: RSAVPVSMVPTLAGQ*TSASVVSWRLGGGL
Trigger: CAGACCACCACCCAGCCTCCAGGATACTACGCTTGCTGAAGTTCACTGCCCAGCCAGTGTGGGGACCATGGAGACAGGGACTGCGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS GCA 90 bp CTGGTCTTTAGCACGAAGTTTGGGTCTGCTCCCAACCCAGGCTCCTaGCCCGGCTCAGGGATATCTGCTCCAATCAGGTCCCCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LVFSTKFGSAPNPGS*PGSGISAPIRSPFP
Trigger: GGGGAAGGGGGACCTGATTGGAGCAGATATCCCTGAGCCGGGGCAGGAGCCTGGGTTGGGAGCAGACCCAAACTTCGTGCTAAAGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 90 bp ACGTTATTATTGGCCTTCATGCCTCCCTGGCCCCGGCGGCCAAAGTaGCCGGTCAGTCGGTGTAGGACAGTACGGCTCCGTCTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: TLLLAFMPPWPRRPK*PVSRCRTVRLRLLA
Trigger: TGCCAGAAGACGGAGCCGTACTGTCCTACACCGACTGACCGGCCACTTTGGCCGCCGGGGCCAGGGAGGCATGAAGGCCAATAATAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 90 bp GGCTGGGCAGTGAACTTCAGCAAGCGTAGTATCCTGGAGGCTGGGTaGTGGTCTGGACGCACAAGGAGAGAGGCATGGTGGCCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GWAVNFSKRSILEAG*WSGRTRREAWWPQL
Trigger: CAGCTGAGGCCACCATGCCTCTCTCCTTGTGCGTCCAGACCACCACCCAGCCTCCAGGATACTACGCTTGCTGAAGTTCACTGCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 90 bp CAAGTCCAGGAGCGCAGTCCCTGTCTCCATGGTCCCCACACTGGCTaGGCAGTGAACTTCAGCAAGCGTAGTATCCTGGAGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: QVQERSPCLHGPHTG*AVNFSKRSILEAGW
Trigger: CCACCCAGCCTCCAGGATACTACGCTTGCTGAAGTTCACTGCCCAGCCAGTGTGGGGACCATGGAGACAGGGACTGCGCTCCTGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATGTCCCCGCGGCCTCCTaGGGGGCCAAGTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHVPAAS*GAKSWA
Trigger: AGCCCAGGACTTGGCCCCCAAGGAGGCCGCGGGGAC...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CATGCCTGCTGGGTTCCACAGCCCTCAGGTGGCTCCCCTCACAGAGGGGGAGGTGAGGTTGGGGAAGGCTaGGAAAAGGGAATAGCGTCA +
Preference number: 5 (lower is better)
Translates to: HACWVPQPSGGSPHRGGGEVGEG*EKGIAS
Trigger: TGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC...ACCTCCCCCTCTGTGAGGGGAGCCACCTGAGGGCTGTGGAACCCAGCAGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 90 bp TGGGCAGTGAACTTCAGCAAGCGTAGTATCCTGGAGGCTGGGTGGTaGTCTGGACGCACAAGGAGAGAGGCATGGTGGCCTCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: WAVNFSKRSILEAGW*SGRTRREAWWPQLW
Trigger: CCACAGCTGAGGCCACCATGCCTCTCTCCTTGTGCGTCCAGACCACCACCCAGCCTCCAGGATACTACGCTTGCTGAAGTTCACTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGGGCACCTCCAGACGCTaGCCCAACTCATGCAACCAG +
Preference number: 5 (lower is better)
Translates to: LETWASFGAVQALSETMLGTSRR*PNSCNQ
Trigger: CTGGTTGCATGAGTTGGGCAAGCGTCTGGAGGTGCC...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp TGGGTGGTAGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCACACGGATGAAGTCCTaGAGGTCCTTCATGCGGCTG +
Preference number: 5 (lower is better)
Translates to: WVVEESWRPGRVLEQSRPTRMKS*RSFMRL
Trigger: CAGCCGCATGAAGGACCTCAAGGACTTCATCCGTGT...GGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCTACCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGATCGAGCATGCGCTGCTaGAGCGGCCGCGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: GSAVGIFELLAAEETTLRSSMRC*SGRGRR
Trigger: CCGCCTGCCGCGGCCGCTCAAGCAGCGCATGCTCGA...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTATGGATGGCAGCGTCTaGTCTGAGGAGGAGCCGAGG +
Preference number: 5 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTMDGSV*SEEEPR
Trigger: CCTCGGCTCCTCCTCAGACAAGACGCTGCCATCCAT...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACGTCCCCGCGGCCTCCTaGGGGGCCAAGTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SAVGIFELLAAEETTLRDVPAAS*GAKSWA
Trigger: AGCCCAGGACTTGGCCCCCAAGGAGGCCGCGGGGAC...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACAGCCTCCAGGTCCTGGGGAGTTCTCCGCGTCGGTGTaGGCACACACGTTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: VASSRRDHLERQPPGPGEFSASV*AHTLPK
Trigger: CTTTGGCAACGTGTGTGCCAACACCGACGCGGAGAA...CTCCCCAGGACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS-3UTR CAA 90 bp GTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACAGCCTCCAGGTCCTGGGGAGTCACGCAGTAACTCGTaGGCGTCGATGCCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: VASSRRDHLERQPPGPGESRSNS*ASMPLL
Trigger: CAACAGCGGCATCGACGCCAACGAGTTACTGCGTGA...CTCCCCAGGACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS-3UTR CAA 90 bp GTGAGACCATGTTGTAATGGGGGAGAACAGGCTTGGCAGCGGTCTGGGGTCAGGATGGCCAGCACCATGTaGTCTCGGAGCACCTCAAGC +
Preference number: 5 (lower is better)
Translates to: VRPCCNGGEQAWQRSGVRMASTM*SRSTSS
Trigger: GCTTGAGGTGCTCCGAGACAACATGGTGCTGGCCAT...CCTGACCCCAGACCGCTGCCAAGCCTGTTCTCCCCCATTACAACATGGTCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATATGGATGGCAGCGTCTaGTCTGAGGAGGAGCCGAGG +
Preference number: 5 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHMDGSV*SEEEPR
Trigger: CCTCGGCTCCTCCTCAGACAAGACGCTGCCATCCAT...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCAGAAGAGACCACCTaGAGAGACAGCCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTAEETT*RDSLPP
Trigger: TGGAGGCAGGCTGTCTCTCAAGGTGGTCTCTTCTGC...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264661.4
CDS-3UTR CAA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGGCAGAAGAGACCACCTaGAGAGACAGCCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: LETWASFGAVQALSETMLAEETT*RDSLQV
Trigger: GACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTGC...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS CCA 90 bp CAAAGTGGCCGGTCAGTCGGTGTAGGACAGTACGGCTCCGTCTTCTaGCAGACCGAAATTTCCAGGTGGCTCCCCTTCTACCAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: QSGRSVGVGQYGSVF*QTEISRWLPFYQGS
Trigger: ACTCCCTTGGTAGAAGGGGAGCCACCTGGAAATTTCGGTCTGCCAGAAGACGGAGCCGTACTGTCCTACACCGACTGACCGGCCACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 90 bp GATGGCTTTGGCTCAAACACGTTATTATTGGCCTTCATGCCTCCCTaGCCCCGGCGGCCAAAGTGGCCGGTCAGTCGGTGTAGGACAGTA +
Preference number: 5 (lower is better)
Translates to: DGFGSNTLLLAFMPP*PRRPKWPVSRCRTV
Trigger: TACTGTCCTACACCGACTGACCGGCCACTTTGGCCGCCGGGGCCAGGGAGGCATGAAGGCCAATAATAACGTGTTTGAGCCAAAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGTTGGCCAGCAGGAAGTaGCTGTGCGTTCCGTCAAAA +
Preference number: 5 (lower is better)
Translates to: RGELETWASFGAVQALSELASRK*LCVPSK
Trigger: TTTTGACGGAACGCACAGCAACTTCCTGCTGGCCAA...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GAGTTTATTTCCTATCCAAAAGTGAGCCCAGGGTGTTGGGTGGTAGAGGAGAGCCCCACGGAGGCCACCTaGTACTCGGGCACTGATGGC +
Preference number: 5 (lower is better)
Translates to: EFISYPKVSPGCWVVEESPTEAT*YSGTDG
Trigger: GCCATCAGTGCCCGAGTACAAGGTGGCCTCCGTGGG...GCTCTCCTCTACCACCCAACACCCTGGGCTCACTTTTGGATAGGAAATAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATACACGGATGAAGTCCTaGAGGTCCTTCATGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PGEKVGSHLPSPMGTAVHTRMKS*RSFMRL
Trigger: CAGCCGCATGAAGGACCTCAAGGACTTCATCCGTGT...ATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp AGAGGAGAGCTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGGTTGGGATTTTTGAGTaGCTAGCAGCAGAAGAGACC +
Preference number: 5 (lower is better)
Translates to: RGELETWASFGAVQALSEVGIFE*LAAEET
Trigger: GGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAAC...CTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAGCTCTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATAGTGAGCCCAGGGTGTaGGGTGGTAGAGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHSEPRV*GGRGEL
Trigger: CAGCTCTCCTCTACCACCCAACACCCTGGGCTCACT...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CCTCCAGGTCCTGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTTCAAACACGTTATTATaGGCCTTCATGCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PPGPGEKVGSHLPSPMGTSNTLL*AFMPPW
Trigger: CCAGGGAGGCATGAAGGCCAATAATAACGTGTTTGA...AGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCAGGACCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGTCAAACACGTTATTATaGGCCTTCATGCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: LETWASFGAVQALSETMLSNTLL*AFMPPW
Trigger: CCAGGGAGGCATGAAGGCCAATAATAACGTGTTTGA...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp CTGGAGACCTGGGCGAGTTTTGGAGCAGTCCAGGCCCTGAGTGAGACCATGTTGCGGGCACTGATGGCTTaGGCTCAAACACGTTATTAT +
Preference number: 5 (lower is better)
Translates to: LETWASFGAVQALSETMLRALMA*AQTRYY
Trigger: ATAATAACGTGTTTGAGCCAAAGCCATCAGTGCCCG...CAACATGGTCTCACTCAGGGCCTGGACTGCTCCAAAACTCGCCCAGGTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACAGCCTCCAGGTCCTGGGGAGCGGGCACTGATGGCTTaGGCTCAAACACGTTATTAT +
Preference number: 5 (lower is better)
Translates to: VASSRRDHLERQPPGPGERALMA*AQTRYY
Trigger: ATAATAACGTGTTTGAGCCAAAGCCATCAGTGCCCG...CTCCCCAGGACCTGGAGGCTGTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607371.5
CDS-3UTR CAA 90 bp TGGGGAGAAAGTAGGATCTCATCTGCCCAGCCCAATGGGCACTGCGGTTCATCTGAGGTTGGGGAAGGCTaGGAAAAGGGAATAGCGTCA +
Preference number: 5 (lower is better)
Translates to: WGESRISSAQPNGHCGSSEVGEG*EKGIAS
Trigger: TGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC...AGATGAACCGCAGTGCCCATTGGGCTGGGCAGATGAGATCCTACTTTCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCCAGAGCAGCGGGTCATaGGCCTCCATCTCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIQSSGS*ASISRR
Trigger: GCGCCGGGAGATGGAGGCCAATGACCCGCTGCTCTG...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGGCACCTCCAGACGCTaGCCCAACTCATGCAACCAG +
Preference number: 5 (lower is better)
Translates to: VRERIGSAVGIFELLAAEGTSRR*PNSCNQ
Trigger: CTGGTTGCATGAGTTGGGCAAGCGTCTGGAGGTGCC...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGATTCTCCGCGTCGGTGTaGGCACACACGTTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GSAVGIFELLAAEETTLRFSASV*AHTLPK
Trigger: CTTTGGCAACGTGTGTGCCAACACCGACGCGGAGAA...TCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp AGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAAGAGACCACCTTGAGAGACGCGCAGAACGAGGTCTaGATGTGCAGCGATAGGGCC +
Preference number: 5 (lower is better)
Translates to: SAVGIFELLAAEETTLRDAQNEV*MCSDRA
Trigger: GGCCCTATCGCTGCACATCAAGACCTCGTTCTGCGC...GTCTCTCAAGGTGGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GAGGTTGGGGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTCTTTAGCACGAAGTTaGGGTCTGCTCCCAACCCAG +
Preference number: 5 (lower is better)
Translates to: EVGEGLEKGIASEVTTLHSLARS*GLLPTQ
Trigger: CTGGGTTGGGAGCAGACCCAAACTTCGTGCTAAAGA...ATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCCCCAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GGAAGGCTTGGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTATGGCCAGCACCATGTaGTCTCGGAGCACCTCAAGC +
Preference number: 5 (lower is better)
Translates to: GRLGKGNSVRGNHASLKSMASTM*SRSTSS
Trigger: GCTTGAGGTGCTCCGAGACAACATGGTGCTGGCCAT...ACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCCAAGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GTCAGGGAAAGGATAGGGAGTGCTGTTGGGATTTTTGAGTTGCTAGCAGCAGAATCTTTAGCACGAAGTTaGGGTCTGCTCCCAACCCAG +
Preference number: 5 (lower is better)
Translates to: VRERIGSAVGIFELLAAESLARS*GLLPTQ
Trigger: CTGGGTTGGGAGCAGACCCAAACTTCGTGCTAAAGA...TTCTGCTGCTAGCAACTCAAAAATCCCAACAGCACTCCCTATCCTTTCCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS-3UTR CAA 90 bp GGAAAAGGGAATAGCGTCAGAGGTAACCACGCTTCATTAAAAAGTCCAGAAATCGTTGGGATTTTTGAGTaGCTAGCAGCAGAAGAGACC +
Preference number: 5 (lower is better)
Translates to: GKGNSVRGNHASLKSPEIVGIFE*LAAEET
Trigger: GGTCTCTTCTGCTGCTAGCAACTCAAAAATCCCAAC...GATTTCTGGACTTTTTAATGAAGCGTGGTTACCTCTGACGCTATTCCCTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS GCA 72 bp CCTGCCTCCTCCCCTCCCTCTTACTGCCGCTGCCGCTaGCGCTGCCTCTGCTCCGAACCCCGTAGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: PASSPPSYCRCR*RCLCSEPRSSR
Trigger: CCGAGAGCTACGGGGTTCGGAGCAGAGGCAGCGGCAGCGGCAGCGGCAGTAAGAGGGAGGGGAGGAGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264661.4
CDS CCA 72 bp CGGGAAAAGCGGCTGAGGCCACTGGTGTCAGAGCCCTaGCGCAGGTTGAAGGTGAGGTCCCGGGGCAGGCCA +
Preference number: 6 (lower is better)
Translates to: REKRLRPLVSEP*RRLKVRSRGRP
Trigger: TGGCCTGCCCCGGGACCTCACCTTCAACCTGCGCCAGGGCTCTGACACCAGTGGCCTCAGCCGCTTTTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CAA 90 bp CCAGGCTCCGCGCCACTCTCGGCCTCTGTGATGGATGGCAGCGTCTaGTCTGAGGAGGAGCCGAGGCTTTCTGAGCGGGGCTGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: PGSAPLSASVMDGSV*SEEEPRLSERGWER
Trigger: CCTCTCCCAGCCCCGCTCAGAAAGCCTCGGCTCCTCCTCAGACAAGACGCTGCCATCCATCACAGAGGCCGAGAGTGGCGCGGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS TCA 72 bp GACCACCCCCAGGCTCCGCGCCACTCTCGGCCTCTGTaGTGGATGGCAGCGTCTTGTCTGAGGAGGAGCCGA +
Preference number: 6 (lower is better)
Translates to: DHPQAPRHSRPL*WMAASCLRRSR
Trigger: TCGGCTCCTCCTCAGACAAGACGCTGCCATCCATCACAGAGGCCGAGAGTGGCGCGGAGCCTGGGGGTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 72 bp TTGGCCTTCATGCCTCCCTGGCCCCGGCGGCCAAAGTaGCCGGTCAGTCGGTGTAGGACAGTACGGCTCCGT +
Preference number: 6 (lower is better)
Translates to: LAFMPPWPRRPK*PVSRCRTVRLR
Trigger: ACGGAGCCGTACTGTCCTACACCGACTGACCGGCCACTTTGGCCGCCGGGGCCAGGGAGGCATGAAGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS TCA 72 bp AGGCGCTGCGCCGTGATGGGCCGCCCACCGAGCCATTaGCATAGGGCACCTCCAGACGCTTGCCCAACTCAT +
Preference number: 6 (lower is better)
Translates to: RRCAVMGRPPSH*HRAPPDACPTH
Trigger: ATGAGTTGGGCAAGCGTCTGGAGGTGCCCTATGTCAATGGCTCGGTGGGCGGCCCATCACGGCGCAGCGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CAA 72 bp GCGCCACTCTCGGCCTCTGTGATGGATGGCAGCGTCTaGTCTGAGGAGGAGCCGAGGCTTTCTGAGCGGGGC +
Preference number: 6 (lower is better)
Translates to: APLSASVMDGSV*SEEEPRLSERG
Trigger: GCCCCGCTCAGAAAGCCTCGGCTCCTCCTCAGACAAGACGCTGCCATCCATCACAGAGGCCGAGAGTGGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS TCA 72 bp GGCCTGGGCCCTGGGCCAGGGTCAGTGGAACGTGTCTaGCCTGGACTGGAAACTGTGCCTCAAGAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: GLGPGPGSVERV*PGLETVPQEAW
Trigger: CCAAGCCTCTTGAGGCACAGTTTCCAGTCCAGGTCAGACACGTTCCACTGACCCTGGCCCAGGGCCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CAA 90 bp TTGCCCAACTCATGCAACCAGCCAATGTCCCAGAGCAGCGGGTCATaGGCCTCCATCTCCCGGCGCCCGATGACATACCAGATGCAGGCC +
Preference number: 6 (lower is better)
Translates to: LPNSCNQPMSQSSGS*ASISRRPMTYQMQA
Trigger: GGCCTGCATCTGGTATGTCATCGGGCGCCGGGAGATGGAGGCCAATGACCCGCTGCTCTGGGACATTGGCTGGTTGCATGAGTTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS GCA 72 bp AGGCAGCCCCTGCTCGCTGCCCCGAACAACGGCAGCTaGAGGATCTCCCGATTCAGGTGCATAGCAATGTCA +
Preference number: 6 (lower is better)
Translates to: RQPLLAAPNNGS*RISRFRCIAMS
Trigger: TGACATTGCTATGCACCTGAATCGGGAGATCCTGCAGCTGCCGTTGTTCGGGGCAGCGAGCAGGGGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 72 bp GGCTCAAACACGTTATTATTGGCCTTCATGCCTCCCTaGCCCCGGCGGCCAAAGTGGCCGGTCAGTCGGTGT +
Preference number: 6 (lower is better)
Translates to: GSNTLLLAFMPP*PRRPKWPVSRC
Trigger: ACACCGACTGACCGGCCACTTTGGCCGCCGGGGCCAGGGAGGCATGAAGGCCAATAATAACGTGTTTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 72 bp CTGGGCCAGGGTCAGTGGAACGTGTCTGACCTGGACTaGAAACTGTGCCTCAAGAGGCTTGGGGTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: LGQGQWNVSDLD*KLCLKRLGVGG
Trigger: ACCCCCAACCCCAAGCCTCTTGAGGCACAGTTTCCAGTCCAGGTCAGACACGTTCCACTGACCCTGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CAA 72 bp TCATGCAACCAGCCAATGTCCCAGAGCAGCGGGTCATaGGCCTCCATCTCCCGGCGCCCGATGACATACCAG +
Preference number: 6 (lower is better)
Translates to: SCNQPMSQSSGS*ASISRRPMTYQ
Trigger: CTGGTATGTCATCGGGCGCCGGGAGATGGAGGCCAATGACCCGCTGCTCTGGGACATTGGCTGGTTGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS TCA 72 bp GTCCCTGTCTCCATGGTCCCCACACTGGCTGGGCAGTaGACTTCAGCAAGCGTAGTATCCTGGAGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: VPVSMVPTLAGQ*TSASVVSWRLG
Trigger: ACCCAGCCTCCAGGATACTACGCTTGCTGAAGTTCACTGCCCAGCCAGTGTGGGGACCATGGAGACAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS GCA 72 bp GGTCAGTGGAACGTGTCTGACCTGGACTGGAAACTGTaGCTCAAGAGGCTTGGGGTTGGGGGTGAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: GQWNVSDLDWKL*LKRLGVGGEAS
Trigger: AGAGGCCTCACCCCCAACCCCAAGCCTCTTGAGGCACAGTTTCCAGTCCAGGTCAGACACGTTCCACTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS TCA 72 bp AGTCACGCAGTAACTCGTTGGCGTCGATGCCGCTGTTaGCGGCCCACGTGGTCTGGAAGTATTCGAGCATGC +
Preference number: 6 (lower is better)
Translates to: SHAVTRWRRCRC*RPTWSGSIRAC
Trigger: GCATGCTCGAATACTTCCAGACCACGTGGGCCGTCAACAGCGGCATCGACGCCAACGAGTTACTGCGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS GCA 72 bp ATGGCTTTGGCTCAAACACGTTATTATTGGCCTTCATaGCTCCCTGGCCCCGGCGGCCAAAGTGGCCGGTCA +
Preference number: 6 (lower is better)
Translates to: MALAQTRYYWPS*LPGPGGQSGRS
Trigger: TGACCGGCCACTTTGGCCGCCGGGGCCAGGGAGGCATGAAGGCCAATAATAACGTGTTTGAGCCAAAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 72 bp CGGTCAGTCGGTGTAGGACAGTACGGCTCCGTCTTCTaGCAGACCGAAATTTCCAGGTGGCTCCCCTTCTAC +
Preference number: 6 (lower is better)
Translates to: RSVGVGQYGSVF*QTEISRWLPFY
Trigger: GTAGAAGGGGAGCCACCTGGAAATTTCGGTCTGCCAGAAGACGGAGCCGTACTGTCCTACACCGACTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 72 bp AACTTCAGCAAGCGTAGTATCCTGGAGGCTGGGTGGTaGTCTGGACGCACAAGGAGAGAGGCATGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: NFSKRSILEAGW*SGRTRREAWWP
Trigger: AGGCCACCATGCCTCTCTCCTTGTGCGTCCAGACCACCACCCAGCCTCCAGGATACTACGCTTGCTGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 72 bp GTGAACTTCAGCAAGCGTAGTATCCTGGAGGCTGGGTaGTGGTCTGGACGCACAAGGAGAGAGGCATGGTGG +
Preference number: 6 (lower is better)
Translates to: VNFSKRSILEAG*WSGRTRREAWW
Trigger: CCACCATGCCTCTCTCCTTGTGCGTCCAGACCACCACCCAGCCTCCAGGATACTACGCTTGCTGAAGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 72 bp AAGGTCTCAAGTCCAGGAGCGCAGTCCCTGTCTCCATaGTCCCCACACTGGCTGGGCAGTGAACTTCAGCAA +
Preference number: 6 (lower is better)
Translates to: KVSSPGAQSLSP*SPHWLGSELQQ
Trigger: TTGCTGAAGTTCACTGCCCAGCCAGTGTGGGGACCATGGAGACAGGGACTGCGCTCCTGGACTTGAGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CAA 72 bp AAGTCACGCAGTAACTCGTTGGCGTCGATGCCGCTGTaGACGGCCCACGTGGTCTGGAAGTATTCGAGCATG +
Preference number: 6 (lower is better)
Translates to: KSRSNSLASMPL*TAHVVWKYSSM
Trigger: CATGCTCGAATACTTCCAGACCACGTGGGCCGTCAACAGCGGCATCGACGCCAACGAGTTACTGCGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 72 bp ATTACTGTCCCCGCGGCCTCCTTGGGGGCCAAGTCCTaGGCTTCCACTCTGAGTGATATCCTTGAAGGAAAA +
Preference number: 6 (lower is better)
Translates to: ITVPAASLGAKS*ASTLSDILEGK
Trigger: TTTTCCTTCAAGGATATCACTCAGAGTGGAAGCCCAGGACTTGGCCCCCAAGGAGGCCGCGGGGACAGTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5
CDS CCA 72 bp TACGGCTCCGTCTTCTGGCAGACCGAAATTTCCAGGTaGCTCCCCTTCTACCAAGGGAGTTTTCGTGATTAC +
Preference number: 6 (lower is better)
Translates to: YGSVFWQTEISR*LPFYQGSFRDY
Trigger: GTAATCACGAAAACTCCCTTGGTAGAAGGGGAGCCACCTGGAAATTTCGGTCTGCCAGAAGACGGAGCCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264661.4
ENST00000607371.5