Pregenerated sensors for KCNH1-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000234233

Ensembl transcript IDs: ENST00000438597.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AAGTGCTTAGTTGGGGTCTCTCCTCTGTTAAGTCCGAAAGGCGTTTaGAATTCTTCCTTTCCATCCCCGCTCCTAGGACTCTCGCCTCTC	+
Preference number: 5 (lower is better) Translates to: KCLVGVSPLLSPKGV*NSSFPSPLLGLSPL Trigger: GAGAGGCGAGAGTCCTAGGAGCGGGGATGGAAAGGAAGAATTCCAAACGCCTTTCGGACTTAACAGAGGAGAGACCCCAACTAAGCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438597.1
CDS CCA 90 bp	GCCTTCCAACTGCCAGGACTCCTAGTCGCTCTGCAAGTGCTTAGTTaGGGTCTCTCCTCTGTTAAGTCCGAAAGGCGTTTGGAATTCTTC	+
Preference number: 5 (lower is better) Translates to: AFQLPGLLVALQVLS*GLSSVKSERRLEFF Trigger: GAAGAATTCCAAACGCCTTTCGGACTTAACAGAGGAGAGACCCCAACTAAGCACTTGCAGAGCGACTAGGAGTCCTGGCAGTTGGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438597.1
CDS TCA 72 bp	GACGCCAGGAAAACCATCTGCCCCTCACTTCGAAGGTaGGCCTTAACTTCACCTAGAAAGTGGTGGGTGGGT	+
Preference number: 6 (lower is better) Translates to: DARKTICPSLRR*ALTSPRKWWVG Trigger: ACCCACCCACCACTTTCTAGGTGAAGTTAAGGCTCACCTTCGAAGTGAGGGGCAGATGGTTTTCCTGGCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438597.1
CDS CCA 72 bp	CTGCCAGGACTCCTAGTCGCTCTGCAAGTGCTTAGTTaGGGTCTCTCCTCTGTTAAGTCCGAAAGGCGTTTG	+
Preference number: 6 (lower is better) Translates to: LPGLLVALQVLS*GLSSVKSERRL Trigger: CAAACGCCTTTCGGACTTAACAGAGGAGAGACCCCAACTAAGCACTTGCAGAGCGACTAGGAGTCCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438597.1
CDS CCA 72 bp	GTTGGGGTCTCTCCTCTGTTAAGTCCGAAAGGCGTTTaGAATTCTTCCTTTCCATCCCCGCTCCTAGGACTC	+
Preference number: 6 (lower is better) Translates to: VGVSPLLSPKGV*NSSFPSPLLGL Trigger: GAGTCCTAGGAGCGGGGATGGAAAGGAAGAATTCCAAACGCCTTTCGGACTTAACAGAGGAGAGACCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438597.1
CDS CAA 90 bp	CAAGTGCTTAGTTGGGGTCTCTCCTCTGTTAAGTCCGAAAGGCGTTaGGAATTCTTCCTTTCCATCCCCGCTCCTAGGACTCTCGCCTCT	+
Preference number: 6 (lower is better) Translates to: QVLSWGLSSVKSERR*EFFLSIPAPRTLAS Trigger: AGAGGCGAGAGTCCTAGGAGCGGGGATGGAAAGGAAGAATTCCAAACGCCTTTCGGACTTAACAGAGGAGAGACCCCAACTAAGCACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438597.1
CDS CAA 72 bp	AGTTGGGGTCTCTCCTCTGTTAAGTCCGAAAGGCGTTaGGAATTCTTCCTTTCCATCCCCGCTCCTAGGACT	+
Preference number: 6 (lower is better) Translates to: SWGLSSVKSERR*EFFLSIPAPRT Trigger: AGTCCTAGGAGCGGGGATGGAAAGGAAGAATTCCAAACGCCTTTCGGACTTAACAGAGGAGAGACCCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438597.1

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