RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143473

Ensembl transcript IDs: ENST00000271751.10, ENST00000367007.5, ENST00000624583.2, ENST00000638357.1, ENST00000638498.1, ENST00000638960.1, ENST00000639385.1, ENST00000639754.1, ENST00000639952.1, ENST00000640044.1, ENST00000640243.1, ENST00000640522.1, ENST00000640528.1, ENST00000640566.1, ENST00000640625.1, ENST00000640710.1, ENST00000640890.1

Found 1942 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGTCCCCTGGGGCACAGTGCACCGTCTGGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTC +
Preference number: 1 (lower is better)
Translates to: EVPWGTVHRLELHGQ*PEAAITGQPEGRVL
Trigger: GAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR CCA 90 bp CCCTTGGGGCCCAGGCACTCGGACCCTGGCGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTGGAGGCTGCCTGGAAGGATACGGGC +
Preference number: 1 (lower is better)
Translates to: PLGPRHSDPGACSFA*SGTPEVEAAWKDTG
Trigger: GCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAGGGTCCGAGTGCCTGGGCCCCAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR GCA 90 bp CCAGGGCCATCTGTGCCAACCCTGCGAACCAGGAGAGGTCAGCCCTaGCTTGCACAGACAACCGAGGGCCCAGCCCTGGGACTCGCCGTG +
Preference number: 1 (lower is better)
Translates to: PGPSVPTLRTRRGQP*LAQTTEGPALGLAV
Trigger: CACGGCGAGTCCCAGGGCTGGGCCCTCGGTTGTCTGTGCAAGGCAGGGCTGACCTCTCCTGGTTCGCAGGGTTGGCACAGATGGCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CCA 90 bp CGGACCCTGGCGCCTGTAGCTTTGCGTGGTCTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCA +
Preference number: 1 (lower is better)
Translates to: RTLAPVALRGLAPRR*RLPGRIRAWQDSHA
Trigger: TGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAGGGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CCA 90 bp GCCTGTAGCTTTGCGTGGTCTGGCACCCCGGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACG +
Preference number: 1 (lower is better)
Translates to: ACSFAWSGTPEVEAA*KDTGVAGLSRTVTT
Trigger: CGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR TCA 90 bp AGGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGAGGCTGTGGTTGGCGGAGGCATGCT +
Preference number: 1 (lower is better)
Translates to: RLPGRIRAWQDSHAR*PRWPSRGCGWRRHA
Trigger: AGCATGCCTCCGCCAACCACAGCCTCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CCA 90 bp CCTCTCTCAGCTGCCAGCCTGGCCTCTTTCTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGG +
Preference number: 1 (lower is better)
Translates to: PLSAASLASFCCRNL*KRRRTGWSGGKIRG
Trigger: CCCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CCA 90 bp CATCTAGGTCATCCAGGTCCCGGCCCCCTCTCTCAGCTGCCAGCCTaGCCTCTTTCTGCTGTCGGAATCTCTGGAAGAGGCGCCGGACAG +
Preference number: 1 (lower is better)
Translates to: HLGHPGPGPLSQLPA*PLSAVGISGRGAGQ
Trigger: CTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGCCGGGACCTGGATGACCTAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR TCA 90 bp CTGTGGCCTGCAGCGTCTGCTCAGGGATGGGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGACTCCGATCCTGGGGACTCCTGGCCT +
Preference number: 1 (lower is better)
Translates to: LWPAASAQGWGRTNA*PLPGWDSDPGDSWP
Trigger: AGGCCAGGAGTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACCCCATCCCTGAGCAGACGCTGCAGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR GCA 90 bp CCAGAGCCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTaGACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTC +
Preference number: 1 (lower is better)
Translates to: PEPSLSTVPEEQAMG*TAENPWILRAPLQL
Trigger: GAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR GCA 90 bp TTGAGCTCGCAGGCCTTGTCTTCCCAGGGCCATCTGTGCCAACCCTaGGAACCAGGAGAGGTCAGCCCTGCCTTGCACAGACAACCGAGG +
Preference number: 1 (lower is better)
Translates to: LSSQALSSQGHLCQP*EPGEVSPALHRQPR
Trigger: CCTCGGTTGTCTGTGCAAGGCAGGGCTGACCTCTCCTGGTTCGCAGGGTTGGCACAGATGGCCCTGGGAAGACAAGGCCTGCGAGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 90 bp CTGCAGCGTCTGCTCAGGGATGGGGTAGAACGAATGCTTGACCTCTaGCAGGATGGGACTCCGATCCTGGGGACTCCTGGCCTCACCCAC +
Preference number: 1 (lower is better)
Translates to: LQRLLRDGVERMLDL*QDGTPILGTPGLTH
Trigger: GTGGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACCCCATCCCTGAGCAGACGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR TCA 90 bp CCTTGGACACCTTGTTCCAGTCCTCACTCTTCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCC +
Preference number: 1 (lower is better)
Translates to: PWTPCSSPHSSRKHL*SGPSFCAWHNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAGAGTGAGGACTGGAACAAGGTGTCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CCA 90 bp GCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTCTCCACA +
Preference number: 1 (lower is better)
Translates to: AGLSRTVTTLAFTRL*LAEACSVRTLPFST
Trigger: TGTGGAGAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CCA 90 bp ACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTaGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTC +
Preference number: 1 (lower is better)
Translates to: TVPEEQAMGCTAENP*ILRAPLQLLPLPHL
Trigger: GAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CCA 90 bp GAGGCACATGGTCCTGGCTCGGGAACCCAGAGTGGCATCCTGGCATaGGAAGGCAGTCAGCACAAAGCAGCCTGCGGTCAAGTTCATGGT +
Preference number: 1 (lower is better)
Translates to: EAHGPGSGTQSGILA*EGSQHKAACGQVHG
Trigger: ACCATGAACTTGACCGCAGGCTGCTTTGTGCTGACTGCCTTCCCATGCCAGGATGCCACTCTGGGTTCCCGAGCCAGGACCATGTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR TCA 90 bp CACCCCTCCATCAGCCGGGAGGAGCACGTTCAACCAGCAGCCAAGTaGCAGGGACAGGACCTACCCTCTTCAAAGCAGCCTGTCAGGATA +
Preference number: 1 (lower is better)
Translates to: HPSISREEHVQPAAK*QGQDLPSSKQPVRI
Trigger: TATCCTGACAGGCTGCTTTGAAGAGGGTAGGTCCTGTCCCTGTCACTTGGCTGCTGGTTGAACGTGCTCCTCCCGGCTGATGGAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 90 bp ACGGTGACCACGCTGGCCTTCACGAGGCTGTGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCCTTCTCCACATCTAGGTCATCCAGG +
Preference number: 1 (lower is better)
Translates to: TVTTLAFTRLWLAEA*SVRTLPFSTSRSSR
Trigger: CCTGGATGACCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGCCAGCGTGGTCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR TCA 90 bp TGTCGCAACCTGGAGAAGCCAGGGGCAGCCCCTGTAAGCCTGATGTaGGAAGCTACATATGAGGTTAGGGCTCATGGAGCAGGACTCTCC +
Preference number: 1 (lower is better)
Translates to: CRNLEKPGAAPVSLM*EATYEVRAHGAGLS
Trigger: GGAGAGTCCTGCTCCATGAGCCCTAACCTCATATGTAGCTTCTCACATCAGGCTTACAGGGGCTGCCCCTGGCTTCTCCAGGTTGCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 90 bp AGAGCTGGAGGGAAATGGCAGGGCCTCTTGACATTGACCGTTGGGTaGCAGACAAGAAGCCTGTCATCAAGTCCCTGGAGAGCTGAGAGG +
Preference number: 1 (lower is better)
Translates to: RAGGKWQGLLTLTVG*QTRSLSSSPWRAER
Trigger: CCTCTCAGCTCTCCAGGGACTTGATGACAGGCTTCTTGTCTGGCACCCAACGGTCAATGTCAAGAGGCCCTGCCATTTCCCTCCAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 90 bp TTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGTaGCTCACCTCCAGGACTGTGGCCTGCAGCGTCTGCTCAGGGATG +
Preference number: 1 (lower is better)
Translates to: LVILAFKALMSSFSS*LTSRTVACSVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGAGGTGAGGCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR TCA 90 bp AAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCTaGGGAATGCCATGGGGACACTTGGGAAGAGGCCAAGAAGGAACA +
Preference number: 1 (lower is better)
Translates to: KQLWAHDPSCRCSIP*GMPWGHLGRGQEGT
Trigger: TGTTCCTTCTTGGCCTCTTCCCAAGTGTCCCCATGGCATTCCTCAGGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR TCA 90 bp CCACCAGATAATGGTTTATACTGGAAGGCTCAGGTCACTGGTATCTaGGGCACATGGTCCTGGCTCGGGAACCCAGAGTGGCATCCTGGC +
Preference number: 1 (lower is better)
Translates to: PPDNGLYWKAQVTGI*GTWSWLGNPEWHPG
Trigger: GCCAGGATGCCACTCTGGGTTCCCGAGCCAGGACCATGTGCCTCAGATACCAGTGACCTGAGCCTTCCAGTATAAACCATTATCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 90 bp TCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCTGAGGAATaGCATGGGGACACTTGGGAAGAGGCCAAGAAGGAACAGAAGCAA +
Preference number: 1 (lower is better)
Translates to: SGLMTLPADAPYPEE*HGDTWEEAKKEQKQ
Trigger: TTGCTTCTGTTCCTTCTTGGCCTCTTCCCAAGTGTCCCCATGGCATTCCTCAGGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR GCA 90 bp CAGAGTGGCATCCTGGCATGGGAAGGCAGTCAGCACAAAGCAGCCTaGGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGC +
Preference number: 1 (lower is better)
Translates to: QSGILAWEGSQHKAA*GQVHGAKRKGERFG
Trigger: GCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAGGCTGCTTTGTGCTGACTGCCTTCCCATGCCAGGATGCCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CCA 90 bp AAATTTCACGGACATCCGTCTCCCTCAGGCAGAGCTGGAGGGAAATaGCAGGGCCTCTTGACATTGACCGTTGGGTGCCAGACAAGAAGC +
Preference number: 1 (lower is better)
Translates to: KFHGHPSPSGRAGGK*QGLLTLTVGCQTRS
Trigger: GCTTCTTGTCTGGCACCCAACGGTCAATGTCAAGAGGCCCTGCCATTTCCCTCCAGCTCTGCCTGAGGGAGACGGATGTCCGTGAAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR TCA 90 bp GAGGATTACAGGAGAATAAAGCCCATGCACCCACACGTGCACCTGTaGCCCAAGATGAACAGATTCCTGCCGCAGGAGCTGGCTTCCAGT +
Preference number: 1 (lower is better)
Translates to: EDYRRIKPMHPHVHL*PKMNRFLPQELASS
Trigger: ACTGGAAGCCAGCTCCTGCGGCAGGAATCTGTTCATCTTGGGTCACAGGTGCACGTGTGGGTGCATGGGCTTTATTCTCCTGTAATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 90 bp AGGGCACAGGAGCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAGGGGC +
Preference number: 1 (lower is better)
Translates to: RAQEPLDSMSLLPKL*KDGSDAAATLQGRG
Trigger: GCCCCTACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGCTCCTGTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640528.1
3UTR GCA 90 bp GAAGGAGACCTGAGGATTCCCAGCTTCAAGTGTCTATGGGAGGCATaGACCACACCTGCAGCTGCTTTTCTGGCCTTAACCATGAGACAG +
Preference number: 1 (lower is better)
Translates to: EGDLRIPSFKCLWEA*TTPAAAFLALTMRQ
Trigger: CTGTCTCATGGTTAAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCTGGGAATCCTCAGGTCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR TCA 90 bp GCTTGTCCCGAGCTAGTTATAAATGACAACTACAGGAAAACATGGTaGCGTCAGACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTC +
Preference number: 1 (lower is better)
Translates to: ACPELVINDNYRKTW*RQTRAVQGRGCREV
Trigger: GACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTCTGACGTCACCATGTTTTCCTGTAGTTGTCATTTATAACTAGCTCGGGACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR TCA 90 bp GACTTCAAAGCCTTATACCATCTTTGCCCCTCATACCCAGAGGTCTaGGAAATTTCACGGACATCCGTCTCCCTCAGGCAGAGCTGGAGG +
Preference number: 1 (lower is better)
Translates to: DFKALYHLCPSYPEV*EISRTSVSLRQSWR
Trigger: CCTCCAGCTCTGCCTGAGGGAGACGGATGTCCGTGAAATTTCTCAGACCTCTGGGTATGAGGGGCAAAGATGGTATAAGGCTTTGAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR TCA 90 bp ACCCAAGATGAACAGATTCCTGCCGCAGGAGCTGGCTTCCAGTCATaGGCCCAGTTTGCGCTGATTCACGAGTGCATTCCTAAAGCTACA +
Preference number: 1 (lower is better)
Translates to: TQDEQIPAAGAGFQS*AQFALIHECIPKAT
Trigger: TGTAGCTTTAGGAATGCACTCGTGAATCAGCGCAAACTGGGCTCATGACTGGAAGCCAGCTCCTGCGGCAGGAATCTGTTCATCTTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR TCA 90 bp CAGAGAGCTGTTTCTCAATATTGGTCATTTTGGCGTTTAAGGCCTTaGTGTCCTCCTTCAGCTCGTGCCTCACCTCCAGGACTGTGGCCT +
Preference number: 1 (lower is better)
Translates to: QRAVSQYWSFWRLRP*CPPSARASPPGLWP
Trigger: AGGCCACAGTCCTGGAGGTGAGGCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAAACAGCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR GCA 90 bp AAAAGTTTAATGGCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTaGAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTG +
Preference number: 1 (lower is better)
Translates to: KSLMAGREGTHQSGT*REFKSSSRGSRISL
Trigger: CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGCCATTAAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
3UTR CCA 90 bp GGCATGGGAAGGCAGTCAGCACAAAGCAGCCTGCGGTCAAGTTCATaGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACACAATG +
Preference number: 1 (lower is better)
Translates to: GMGRQSAQSSLRSSS*CEKEGRKVWLIYTM
Trigger: CATTGTGTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAGGCTGCTTTGTGCTGACTGCCTTCCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CCA 90 bp CAACAGATGGGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTaGTTGGCAGCTTCTCAAGTGAAAGAGGCTGAAGGCCTCACAGCT +
Preference number: 1 (lower is better)
Translates to: QQMGFQIFYGLLPKD*LAASQVKEAEGLTA
Trigger: AGCTGTGAGGCCTTCAGCCTCTTTCACTTGAGAAGCTGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCCCATCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 90 bp ATGGGAAGGCAGTCAGCACAAAGCAGCCTGCGGTCAAGTTCATGGTaGGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACACAATGTTT +
Preference number: 1 (lower is better)
Translates to: MGRQSAQSSLRSSSW*EKEGRKVWLIYTMF
Trigger: AAACATTGTGTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAGGCTGCTTTGTGCTGACTGCCTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 90 bp CAGCAACGTGTATCTCCACCAGGGCTCCTAAAATTTCCCAGAGTATaGATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAATGAGAAT +
Preference number: 1 (lower is better)
Translates to: QQRVSPPGLLKFPRV*MGDIVVSATRGNEN
Trigger: ATTCTCATTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTTAGGAGCCCTGGTGGAGATACACGTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 90 bp CAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTaGTTCATTCTCTTTCCAGCTCCTGAAGAGAGTACAATCATGATC +
Preference number: 1 (lower is better)
Translates to: QGHFSPSPYRELETH*FILFPAPEESTIMI
Trigger: GATCATGATTGTACTCTCTTCAGGAGCTGGAAAGAGAATGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR TCA 90 bp CCCCGTGCGGTGAACAAAATACAAAGGTCTGCAGGGCAATCCCAATaGGAATCAAAGTATAAACATAGCACTTGCTACAGTTCTGAGGTT +
Preference number: 1 (lower is better)
Translates to: PRAVNKIQRSAGQSQ*ESKYKHSTCYSSEV
Trigger: AACCTCAGAACTGTAGCAAGTGCTATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGTTCACCGCACGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CCA 90 bp AGTTCATTTAGTCCCCACAAGGGCCTGGACAAAGAGCTTGACAGTTaGCATAATACTTCTACCTTCCATTTAAGGATTTGGAGAGGAAGC +
Preference number: 1 (lower is better)
Translates to: SSFSPHKGLDKELDS*HNTSTFHLRIWRGS
Trigger: GCTTCCTCTCCAAATCCTTAAATGGAAGGTAGAAGTATTATGCCAACTGTCAAGCTCTTTGTCCAGGCCCTTGTGGGGACTAAATGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR TCA 90 bp TTACAGAGAGCTGGAAACTCACTGCTTCATTCTCTTTCCAGCTCCTaGAGAGAGTACAATCATGATCCTGCAGTCTTTTTCCATTTTCTC +
Preference number: 1 (lower is better)
Translates to: LQRAGNSLLHSLSSS*REYNHDPAVFFHFL
Trigger: GAGAAAATGGAAAAAGACTGCAGGATCATGATTGTACTCTCTTCAGGAGCTGGAAAGAGAATGAAGCAGTGAGTTTCCAGCTCTCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR TCA 90 bp ACAACTCCTGAGGAGACTGAGAGGATCTTCTGGAAGTTAATATCCTaGGTATCTCAGAGAGCTGTTTCTCAATATTGGTCATTTTGGCGT +
Preference number: 1 (lower is better)
Translates to: TTPEETERIFWKLIS*VSQRAVSQYWSFWR
Trigger: ACGCCAAAATGACCAATATTGAGAAACAGCTCTCTGAGATACTCAGGATATTAACTTCCAGAAGATCCTCTCAGTCTCCTCAGGAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CCA 90 bp GAGCTTGACAGTTGGCATAATACTTCTACCTTCCATTTAAGGATTTaGAGAGGAAGCTTGCTGAATGGGATGGGGTGGTATAGTACATTT +
Preference number: 1 (lower is better)
Translates to: ELDSWHNTSTFHLRI*RGSLLNGMGWYSTF
Trigger: AAATGTACTATACCACCCCATCCCATTCAGCAAGCTTCCTCTCCAAATCCTTAAATGGAAGGTAGAAGTATTATGCCAACTGTCAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CCA 90 bp ATCATTTGTGCTTGTTTAAAAATGTTGAGAAGGGAATATCATCAATaGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATA +
Preference number: 1 (lower is better)
Translates to: IICACLKMLRREYHQ*KGLHVPLNIPKPQI
Trigger: TATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAAGCACAAATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR TCA 90 bp TTGACTAATTACAAGAATCATATTCACAGAGATGTTTTGCAACATTaGAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCAC +
Preference number: 1 (lower is better)
Translates to: LTNYKNHIHRDVLQH*RDQTECFRLCVVAH
Trigger: GTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCAAAACATCTCTGTGAATATGATTCTTGTAATTAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR GCA 90 bp AGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATaGTTGCATGAGAATGAAGTTTCACTTGAATTTAAGCTGCAGATA +
Preference number: 1 (lower is better)
Translates to: REFKSSSRGSRISLI*LHENEVSLEFKLQI
Trigger: TATCTGCAGCTTAAATTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR GCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 2 (lower is better)
Translates to: NSMASARRQPSLASRKAGTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR-3UTR CCA 90 bp CCTGTAGCTTTGCGTGGTCTGGCACCCCGGAGGTGGAGGCTGCCTGGAAGGATAAGGCGCCGGACAGGGTaGTCCGGGGGCAAGATCAGG +
Preference number: 2 (lower is better)
Translates to: PVALRGLAPRRWRLPGRIRRRTG*SGGKIR
Trigger: CCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCT...TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAAGCTACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR GCA 90 bp CTTGACCTCTGCCAGGATGGGACTCCGATCCTGGGGACTCCTGGCCTCACCCACAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 2 (lower is better)
Translates to: LDLCQDGTPILGTPGLTHSGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...GTGGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CCA 90 bp TCGGAATCTCTGGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGGCCCACTGCAGTCCATaGGGGGTCTTGGCAAAGGAG +
Preference number: 2 (lower is better)
Translates to: SESLEEAPDRVVRGQDQGAHCSP*GVLAKE
Trigger: CTCCTTTGCCAAGACCCCCCATGGACTGCAGTGGGC...CCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR-3UTR CCA 90 bp GCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCCAGAGGAGCAGGCTATaGGTTGCACCGCAGAGAACC +
Preference number: 2 (lower is better)
Translates to: AWKDTGVAGLSRTVTTLAQRSRL*VAPQRT
Trigger: GGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTG...GGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR-3UTR GCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 2 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGTCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 2 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR-3UTR GCA 90 bp CAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 2 (lower is better)
Translates to: QASLKRAQLLRLAQSPPPSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR GCA 90 bp CCGGAGGTGGAGGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 2 (lower is better)
Translates to: PEVEAAWKDTGVAGLSRTVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...CGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR CCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCGCCCACTGCAGTCCATaGGGGGTCTTGGCAAAGGAG +
Preference number: 2 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVAHCSP*GVLAKE
Trigger: CTCCTTTGCCAAGACCCCCCATGGACTGCAGTGGGC...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTAGGCGCCGGACAGGGTaGTCCGGGGGCAAGATCAGG +
Preference number: 2 (lower is better)
Translates to: EPLDLKGPSPALTLASPPRRRTG*SGGKIR
Trigger: CCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCT...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR-3UTR GCA 90 bp CAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 2 (lower is better)
Translates to: QASLKRAQLLRLAQSPPPMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR GCA 90 bp GCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTCCAGCTCTTACCCTTaGCTCACCTCCTTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: AWKDTGVAGLSRTVTTLASSSYP*LTSFGE
Trigger: TTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGA...GGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR CAA 90 bp TCCAGAGCCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTaGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: SRALPVNCPRGAGYG*HRREPLDLKGPSPA
Trigger: AGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGGCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CAA 90 bp GCCTTGGACACCTTGTTCCAGTCCTCACTCTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCC +
Preference number: 2 (lower is better)
Translates to: ALDTLFQSSLFPQAS*KRAQLLRLAQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAGAGTGAGGACTGGAACAAGGTGTCCAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR TCA 90 bp CTTGACCTCTGCCAGGATGGGACTCCGATCCTGGGGACTCCTGGCCTCACCCACGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 2 (lower is better)
Translates to: LDLCQDGTPILGTPGLTHAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...GTGGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR CCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGCTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: NSMASARRQPSLASRKAGLTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR CAA 90 bp GGACTCTCACGCACGGTGACCACGCTGGCCTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTCTCCACATCT +
Preference number: 2 (lower is better)
Translates to: GLSRTVTTLAFTRLW*AEACSVRTLPFSTS
Trigger: AGATGTGGAGAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CCA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTATGCCGGGAAGTCCTTaGCCCACTGCAGTCCATGGG +
Preference number: 2 (lower is better)
Translates to: EPLDLKGPSPALTLASPPMPGSP*PTAVHG
Trigger: CCCATGGACTGCAGTGGGCCAAGGACTTCCCGGCAT...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp CAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGCGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 2 (lower is better)
Translates to: QVALGDATVTRVCLLQCGGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...GCCACACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR TCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 2 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR GCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 2 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR GCA 90 bp CTTGACCTCTGCCAGGATGGGACTCCGATCCTGGGGACTCCTGGCCTCACCCACAATTCCAGCACTTTCTaGAGGGCATCCCGCTTGATC +
Preference number: 2 (lower is better)
Translates to: LDLCQDGTPILGTPGLTHNSSTF*RASRLI
Trigger: GATCAAGCGGGATGCCCTGCAGAAAGTGCTGGAATT...GTGGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR CAA 90 bp GAGAAGCTACATATGAGGTTAGGGCTCATGGAGCAGGACTCTCCCTaGAGCTCGCAGGCCTTGTCTTCCCAGGGCCATCTGTGCCAACCC +
Preference number: 2 (lower is better)
Translates to: EKLHMRLGLMEQDSP*SSQALSSQGHLCQP
Trigger: GGGTTGGCACAGATGGCCCTGGGAAGACAAGGCCTGCGAGCTCAAGGGAGAGTCCTGCTCCATGAGCCCTAACCTCATATGTAGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR TCA 90 bp CTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTGGCAGTATTTGGGGTCCTaGCACCTCTCTCTAGGGCAT +
Preference number: 2 (lower is better)
Translates to: LSTVPEEQAMGCTAENPWQYLGS*HLSLGH
Trigger: ATGCCCTAGAGAGAGGTGTCAGGACCCCAAATACTG...CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR TCA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 2 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR TCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGCAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 2 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR GCA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTGGCATGCACCACACCTaGAGCTGCTTTTCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: EPLDLKGPSPALTLASPPGMHHT*SCFSGL
Trigger: AAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCC...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 2 (lower is better)
Translates to: NSMASARRQPSLASRKAGGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR-3UTR CCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR CCA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 2 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR TCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACTACAGGAAAACATGGTaGCGTCAGACACGGGCTGTA +
Preference number: 2 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENYRKTW*RQTRAV
Trigger: TACAGCCCGTGTCTGACGTCACCATGTTTTCCTGTA...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR TCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGGAGACAGAAAGTTTCTaGGCTCTACCCTCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWEETESF*ALPSCP
Trigger: GGGACAGGAGGGTAGAGCTCAGAAACTTTCTGTCTC...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCACCACACCTGCAGCTaGTTTTCTGGCCTTAACCAT +
Preference number: 2 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENHHTCS*FSGLNH
Trigger: ATGGTTAAGGCCAGAAAAGCAGCTGCAGGTGTGGTG...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp ATGGGTTGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTAGGCATGCACCACACCTaGAGCTGCTTTTCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: MGCTAENPWILRAPLQLLGMHHT*SCFSGL
Trigger: AAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCC...TAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCCATACCCTGAGGAATaGCATGGGGACACTTGGGAA +
Preference number: 2 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWEPYPEE*HGDTWE
Trigger: TTCCCAAGTGTCCCCATGGCATTCCTCAGGGTATGG...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp GCCTTCACGAGGCTGTGGTTGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTCAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: AFTRLWLAEACSVRTLPFSLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...GAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CCA 90 bp CTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTGGAGCTTCAAGTGTCTATaGGAGGCATGCACCACACCT +
Preference number: 2 (lower is better)
Translates to: LSTVPEEQAMGCTAENPWSFKCL*EACTTP
Trigger: AGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCT...CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp CCATCACTGGGAGCCACAGCTCCAAGGCCACTTCTCTCCATCACCTTACAGAGACAGAGGAGCAGGCTATaGGTTGCACCGCAGAGAACC +
Preference number: 2 (lower is better)
Translates to: PSLGATAPRPLLSITLQRQRSRL*VAPQRT
Trigger: GGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTG...TCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGAGCTGTGGCTCCCAGTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp CTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTGGTTGCGTGTCAGTATTTaGGGTCCTGACACCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LSTVPEEQAMGCTAENPWLRVSI*GPDTSL
Trigger: GAGAGAGGTGTCAGGACCCCAAATACTGACACGCAA...CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CAA 90 bp TTTGTCCTCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTaGTTCCAGTCCTCACTCTTCCCGCAAGCATCTTTGAAGCGGGCC +
Preference number: 2 (lower is better)
Translates to: FVLSGSVSIDSALDT*FQSSLFPQASLKRA
Trigger: GGCCCGCTTCAAAGATGCTTGCGGGAAGAGTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGAGGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR TCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 2 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR GCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATCAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
3UTR-3UTR GCA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACCAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR GCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACTCCCCAGATGGCTGCTaGTCTGTTCTGGTAGTTTTA +
Preference number: 2 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENSPDGC*SVLVVL
Trigger: TAAAACTACCAGAACAGAGCAGCAGCCATCTGGGGA...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACTGTCTATGGGAGGCATaGACCACACCTGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHCLWEA*TTPAAA
Trigger: AGCAGCTGCAGGTGTGGTGCATGCCTCCCATAGACA...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR-3UTR GCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 2 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR CCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCCAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 2 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR-3UTR CCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 2 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CAA 90 bp CCTGACGCTTTTGTCCTCTCGGGAAGTGTCTCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCCTCACTCTTCCCGCAAGCATCTTTG +
Preference number: 2 (lower is better)
Translates to: PDAFVLSGSVSIDSA*DTLFQSSLFPQASL
Trigger: CAAAGATGCTTGCGGGAAGAGTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGAGGACAAAAGCGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CCA 90 bp CCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAATGCCGGGAAGTCCTTaGCCCACTGCAGTCCATGGG +
Preference number: 2 (lower is better)
Translates to: PSHRYTVVFLAASSADHKMPGSP*PTAVHG
Trigger: CCCATGGACTGCAGTGGGCCAAGGACTTCCCGGCAT...TTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTATGTCCCCGAGCATCGTaGCATAGGGGCTTGGATGGC +
Preference number: 2 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLCPRAS*HRGLDG
Trigger: GCCATCCAAGCCCCTATGCCACGATGCTCGGGGACA...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CAA 90 bp TGGAGGGCACAGGAGCCTTTAGACAGCATGTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAGG +
Preference number: 2 (lower is better)
Translates to: WRAQEPLDSMSLLPK*CKDGSDAAATLQGR
Trigger: CCTACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGCTCCTGTGCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640528.1
3UTR-3UTR TCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACTCTCTTTCCAGCTCCTaGAGAGAGTACAATCATGAT +
Preference number: 2 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENSLSSS*REYNHD
Trigger: ATCATGATTGTACTCTCTTCAGGAGCTGGAAAGAGA...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR TCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATCACGTTTCACATCGCTaGTCTTCCGGAACACAATCC +
Preference number: 2 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDHVSHR*SSGTQS
Trigger: GGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR GCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 2 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR CCA 90 bp TCCACTGTGCCTGGAAGAGACTTCACTCCTTTCCTTTCTCAGATGCCATTGAGAATGCCGGGAAGTCCTTaGCCCACTGCAGTCCATGGG +
Preference number: 2 (lower is better)
Translates to: STVPGRDFTPFLSQMPLRMPGSP*PTAVHG
Trigger: CCCATGGACTGCAGTGGGCCAAGGACTTCCCGGCAT...TCTCAATGGCATCTGAGAAAGGAAAGGAGTGAAGTCTCTTCCAGGCACAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp CAACAGATGGGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTGGTTGGCAACTCGCCGTGAGCACTaGGCAGGACTAAGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: QQMGFQIFYGLLPKDWLATRREH*AGLRRW
Trigger: CCACCTCCTTAGTCCTGCCCAGTGCTCACGGCGAGT...TGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCCCATCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR TCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGTACAGGAAAACATGGTaGCGTCAGACACGGGCTGTA +
Preference number: 2 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQYRKTW*RQTRAV
Trigger: TACAGCCCGTGTCTGACGTCACCATGTTTTCCTGTA...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp CAACGTGTATCTCCACCAGGGCTCCTAAAATTTCCCAGAGTATGCATGGGAGACCAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: QRVSPPGLLKFPRVCMGDQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...GTCTCCCATGCATACTCTGGGAAATTTTAGGAGCCCTGGTGGAGATACACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR GCA 90 bp TCCTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGACAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: SSSSSCTSESGSGRRNGRQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...TCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR GCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
3UTR-3UTR GCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 2 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENLLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp CCATCACTGGGAGCCACAGCTCCAAGGCCACTTCTCTCCATCACCTTACAGAGATCCCCAGATGGCTGCTaGTCTGTTCTGGTAGTTTTA +
Preference number: 2 (lower is better)
Translates to: PSLGATAPRPLLSITLQRSPDGC*SVLVVL
Trigger: TAAAACTACCAGAACAGAGCAGCAGCCATCTGGGGA...TCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGAGCTGTGGCTCCCAGTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCGGCATGCACCACACCTaGAGCTGCTTTTCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCGMHHT*SCFSGL
Trigger: AAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCC...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp TGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACATCCCAGGGCCATCTGTaGCAACCCTGCGAACCAGGA +
Preference number: 2 (lower is better)
Translates to: CGQVHGAKRKGERFGSFTSQGHL*QPCEPG
Trigger: TCCTGGTTCGCAGGGTTGGCACAGATGGCCCTGGGA...TGTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp CAACAGATGGGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTGGTTGGCACGTGGCATAGGGGCTTaGATGGCCCATACGCAGTTC +
Preference number: 2 (lower is better)
Translates to: QQMGFQIFYGLLPKDWLARGIGA*MAHTQF
Trigger: GAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG...TGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCCCATCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp TTCTCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 2 (lower is better)
Translates to: FSILVILAFKALMSSFSSGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CAA 90 bp TCAGAGAGCTGTTTCTCAATATTGGTCATTTTGGCGTTTAAGGCCTaGATGTCCTCCTTCAGCTCGTGCCTCACCTCCAGGACTGTGGCC +
Preference number: 2 (lower is better)
Translates to: SESCFSILVILAFKA*MSSFSSCLTSRTVA
Trigger: GGCCACAGTCCTGGAGGTGAGGCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAAACAGCTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CAA 90 bp CAACAGAGTGAGACCCCTTTAGACAGCATGTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAGG +
Preference number: 2 (lower is better)
Translates to: QQSETPLDSMSLLPK*CKDGSDAAATLQGR
Trigger: CCTACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGGTCTCACTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
3UTR-3UTR TCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGAAGAGAGTACAATCATaGTCCTGCAGTCTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWEKRVQS*SCSLFP
Trigger: TGGAAAAAGACTGCAGGATCATGATTGTACTCTCTT...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp CAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGCCTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: QVALGDATVTRVCLLQCGLTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...GCCACACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR CCA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACCAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 2 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR TCA 90 bp CCATCACTGGGAGCCACAGCTCCAAGGCCACTTCTCTCCATCACCTTACAGAGAAGCATAGTATATACATaGGAGGTTCTCGGCACTTTC +
Preference number: 2 (lower is better)
Translates to: PSLGATAPRPLLSITLQRSIVYT*EVLGTF
Trigger: GAAAGTGCCGAGAACCTCTCATGTATATACTATGCT...TCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGAGCTGTGGCTCCCAGTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTAATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 2 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR GCA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATAAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSISLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR-3UTR CCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCAGCTTCAAGTGTCTATaGGAGGCATGCACCACACCT +
Preference number: 2 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPSFKCL*EACTTP
Trigger: AGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCT...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp CTGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACAGAGCTGGAGGGAAATaGCAGGGCCTCTTGACATTG +
Preference number: 2 (lower is better)
Translates to: LRSSSWCEKEGRKVWLIYRAGGK*QGLLTL
Trigger: CAATGTCAAGAGGCCCTGCCATTTCCCTCCAGCTCT...GTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CAA 90 bp AGCACTTGCTACAGTTCTGAGGTTGTGTGTGTCTGTGTGTCTGCTTaGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGC +
Preference number: 2 (lower is better)
Translates to: STCYSSEVVCVCVSA*LIKQLWAHDPSCRC
Trigger: GCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGCAGACACACAGACACACACAACCTCAGAACTGTAGCAAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR TCA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCACACTTGCTACAGTTCTaGGGTTGTGTGTGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: SKATSLHHLTESWKLTASHLLQF*GCVCLC
Trigger: ACACAGACACACACAACCTCAGAACTGTAGCAAGTG...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR TCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCTTTCTCAGATGCCATTaGGAGAAGCCCAAGCACATG +
Preference number: 2 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPFLRCH*EKPKHM
Trigger: CATGTGCTTGGGCTTCTCTCAATGGCATCTGAGAAA...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR TCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCGGCTCTCAGAAACACTaGATATCTTTGGTAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPGSQKH*ISLVGQ
Trigger: CTGCCCTACCAAAGATATTCAGTGTTTCTGAGAGCC...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR TCA 90 bp CAACGTGTATCTCCACCAGGGCTCCTAAAATTTCCCAGAGTATGCATGGGAGACGGCTCTCAGAAACACTaGATATCTTTGGTAGGGCAG +
Preference number: 2 (lower is better)
Translates to: QRVSPPGLLKFPRVCMGDGSQKH*ISLVGQ
Trigger: CTGCCCTACCAAAGATATTCAGTGTTTCTGAGAGCC...GTCTCCCATGCATACTCTGGGAAATTTTAGGAGCCCTGGTGGAGATACACGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR GCA 90 bp ACAAACACCACCTCATTGACCATCTTAGTTCTTAGAGTTAACCTTAAACCCACCGTACAAGGACGGGGATaGCGGGAAGTCCTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: TNTTSLTILVLRVNLKPTVQGRG*REVLGP
Trigger: TGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTAC...GGTGGGTTTAAGGTTAACTCTAAGAACTAAGATGGTCAATGAGGTGGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR GCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTACAAGGACGGGGATaGCGGGAAGTCCTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: RGGCILQHKISLYPDTRSVQGRG*REVLGP
Trigger: TGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTAC...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp GCTGAAGGCCTCACAGCTTTATTCAAAGTCACAGATAGTTGTGACTCGGCCTTATGCCATGGGGACACTTaGGAAGAGGCCAAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: AEGLTALFKVTDSCDSALCHGDT*EEAKKE
Trigger: TTCCTTCTTGGCCTCTTCCCAAGTGTCCCCATGGCA...TAAGGCCGAGTCACAACTATCTGTGACTTTGAATAAAGCTGTGAGGCCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp CAACAGATGGGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTGGTTGGCATTGCGTGTCAGTATTTaGGGTCCTGACACCTCTCTC +
Preference number: 2 (lower is better)
Translates to: QQMGFQIFYGLLPKDWLALRVSI*GPDTSL
Trigger: GAGAGAGGTGTCAGGACCCCAAATACTGACACGCAA...TGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCCCATCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CAA 90 bp GTTTCTCAACCAAATGGTCGTCTCTGTTTCCGTCCTTTGGCTATCTaGTCATGTCCAGTGGAGGAGCCCTTTGTAAGTATATGGGATGGC +
Preference number: 2 (lower is better)
Translates to: VSQPNGRLCFRPLAI*SCPVEEPFVSIWDG
Trigger: GCCATCCCATATACTTACAAAGGGCTCCTCCACTGGACATGACAAGATAGCCAAAGGACGGAAACAGAGACGACCATTTGGTTGAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR TCA 90 bp AAAATTTCCCAGAGTATGCATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAACCACACGTGCACCTGTaGCCCAAGATGAACAGATTC +
Preference number: 2 (lower is better)
Translates to: KISQSMHGRHSGQCNKGKPHVHL*PKMNRF
Trigger: GAATCTGTTCATCTTGGGTCACAGGTGCACGTGTGG...TTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR GCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGTCCCCAGATGGCTGCTaGTCTGTTCTGGTAGTTTTA +
Preference number: 2 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVSPDGC*SVLVVL
Trigger: TAAAACTACCAGAACAGAGCAGCAGCCATCTGGGGA...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAGTACAAGGACGGGGATaGCGGGAAGTCCTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: IRGGCILQHKISLYPDTRVQGRG*REVLGP
Trigger: TGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTAC...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp AAGGAGAAGCCCCAGAATGATGAACTGCTCATAAGTAGAAGTGTCCTTGAGGTGCACCACACCTGCAGCTaGTTTTCTGGCCTTAACCAT +
Preference number: 2 (lower is better)
Translates to: KEKPQNDELLISRSVLEVHHTCS*FSGLNH
Trigger: ATGGTTAAGGCCAGAAAAGCAGCTGCAGGTGTGGTG...CACCTCAAGGACACTTCTACTTATGAGCAGTTCATCATTCTGGGGCTTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACGTGTGTCTGTGTGTCTaGTTTGTTAATAAAGCAACT +
Preference number: 2 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHVCLCV*FVNKAT
Trigger: AGTTGCTTTATTAACAAAGCAGACACACAGACACAC...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR-3UTR CCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCACGTGGCATAGGGGCTTaGATGGCCCATACGCAGTTC +
Preference number: 2 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSRGIGA*MAHTQF
Trigger: GAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CAA 90 bp AATGAAGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAGG +
Preference number: 2 (lower is better)
Translates to: NEGKYPLDSMSLLPK*CKDGSDAAATLQGR
Trigger: CCTACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
3UTR-3UTR GCA 90 bp CCAAGAACATGTCTGGACTTCAAAGCCTTATACCATCTTTGCCCCTCATACCCATCCCCAGATGGCTGCTaGTCTGTTCTGGTAGTTTTA +
Preference number: 2 (lower is better)
Translates to: PRTCLDFKALYHLCPSYPSPDGC*SVLVVL
Trigger: TAAAACTACCAGAACAGAGCAGCAGCCATCTGGGGA...TGGGTATGAGGGGCAAAGATGGTATAAGGCTTTGAAGTCCAGACATGTTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR GCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCATGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 2 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
3UTR-3UTR CCA 90 bp AAATTAGACTTCCTCTTACTTGTATGCCGCCATCTGAGGCTAAATCTAATTATGTGTCCCCGAGCATCGTaGCATAGGGGCTTGGATGGC +
Preference number: 2 (lower is better)
Translates to: KLDFLLLVCRHLRLNLIMCPRAS*HRGLDG
Trigger: GCCATCCAAGCCCCTATGCCACGATGCTCGGGGACA...CATAATTAGATTTAGCCTCAGATGGCGGCATACAAGTAAGAGGAAGTCTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp CACTTACTAGATAATGGTGCCACATATCATGCCCCGACTCCTCAAAGAGGAAAACTCTTACCCAAGGACTaGTTGGCAGCTTCTCAAGTG +
Preference number: 2 (lower is better)
Translates to: HLLDNGATYHAPTPQRGKLLPKD*LAASQV
Trigger: CACTTGAGAAGCTGCCAACCAGTCCTTGGGTAAGAG...TTTTCCTCTTTGAGGAGTCGGGGCATGATATGTGGCACCATTATCTAGTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCAGCTCTATCACAGCTaGAGTTCCATTCAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSIQLYHS*SSIQGS
Trigger: AGACCCTTGAATGGAACTCCAGCTGTGATAGAGCTG...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CAA 90 bp AATATCCTGAGTATCTCAGAGAGCTGTTTCTCAATATTGGTCATTTaGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGTGCCTCACC +
Preference number: 2 (lower is better)
Translates to: NILSISESCFSILVI*AFKALMSSFSSCLT
Trigger: GGTGAGGCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAAACAGCTCTCTGAGATACTCAGGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR TCA 90 bp TCCACTGTGCCTGGAAGAGACTTCACTCCTTTCCTTTCTCAGATGCCATTGAGAAGCATAGTATATACATaGGAGGTTCTCGGCACTTTC +
Preference number: 2 (lower is better)
Translates to: STVPGRDFTPFLSQMPLRSIVYT*EVLGTF
Trigger: GAAAGTGCCGAGAACCTCTCATGTATATACTATGCT...TCTCAATGGCATCTGAGAAAGGAAAGGAGTGAAGTCTCTTCCAGGCACAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGACAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: IRGGCILQHKISLYPDTRQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR GCA 90 bp TCCTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGACTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 2 (lower is better)
Translates to: SSSSSCTSESGSGRRNGRLLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...TCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR GCA 90 bp AAAATTTCCCAGAGTATGCATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAACGGTCAAGTTCATGGTaGGAAAAGGAAGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: KISQSMHGRHSGQCNKGKRSSSW*EKEGRK
Trigger: CTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCG...TTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp AATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGACTGTGAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: NRPLSWLQKCLSLILGTVKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...CACAGTCCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CCA 90 bp TTTTTAAATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGAGCTTCAAGTGTCTATaGGAGGCATGCACCACACCT +
Preference number: 2 (lower is better)
Translates to: FLNRPLSWLQKCLSLILGSFKCL*EACTTP
Trigger: AGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCT...CCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR-3UTR CCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTCAGAGGTACCAGGAATaGGGTCACCGTCTAACACAG +
Preference number: 2 (lower is better)
Translates to: RGGCILQHKISLYPDTRSQRYQE*GHRLTQ
Trigger: CTGTGTTAGACGGTGACCCCATTCCTGGTACCTCTG...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCT +
Preference number: 2 (lower is better)
Translates to: TKYKGLQGNPNENQSINIAFTRL*LAEACS
Trigger: AGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR CAA 90 bp GACAATTTGGTTTCTCAACCAAATGGTCGTCTCTGTTTCCGTCCTTaGGCTATCTTGTCATGTCCAGTGGAGGAGCCCTTTGTAAGTATA +
Preference number: 2 (lower is better)
Translates to: DNLVSQPNGRLCFRP*AILSCPVEEPFVSI
Trigger: TATACTTACAAAGGGCTCCTCCACTGGACATGACAAGATAGCCAAAGGACGGAAACAGAGACGACCATTTGGTTGAGAAACCAAATTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR TCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGTGACCATGAGGCAGTaGAGTGTCCCCGAGCATCGT +
Preference number: 2 (lower is better)
Translates to: TKYKGLQGNPNENQSINIVTMRQ*SVPEHR
Trigger: ACGATGCTCGGGGACACTTCACTGCCTCATGGTCAC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTCTGTCCCTCAAGCTCTaGTTGTCCCGAGCTAGTTAT +
Preference number: 2 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLLSLKL*LSRASY
Trigger: ATAACTAGCTCGGGACAAGCAGAGCTTGAGGGACAG...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCTTCCTCTTACTTGTATaGCGCCATCTGAGGCTAAAT +
Preference number: 2 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSIFLLLV*RHLRLN
Trigger: ATTTAGCCTCAGATGGCGGCATACAAGTAAGAGGAA...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp ATCCTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGCTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 2 (lower is better)
Translates to: ILFLKLYVRIRFREKEWELLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...CTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 2 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR CAA 90 bp ACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTaGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTT +
Preference number: 2 (lower is better)
Translates to: TFLLTFPSHRYTVVF*AASSADHKNSISSF
Trigger: AAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
3UTR CAA 90 bp CTGGAAGTTAATATCCTGAGTATCTCAGAGAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCG +
Preference number: 2 (lower is better)
Translates to: LEVNILSISESCFSI*VILAFKALMSSFSS
Trigger: CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAAACAGCTCTCTGAGATACTCAGGATATTAACTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR TCA 90 bp CCAAGAACATGTCTGGACTTCAAAGCCTTATACCATCTTTGCCCCTCATACCCAGCAGGGCAATCCCAATaGGAATCAAAGTATAAACAT +
Preference number: 2 (lower is better)
Translates to: PRTCLDFKALYHLCPSYPAGQSQ*ESKYKH
Trigger: ATGTTTATACTTTGATTCTCATTGGGATTGCCCTGC...TGGGTATGAGGGGCAAAGATGGTATAAGGCTTTGAAGTCCAGACATGTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR GCA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCACTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 2 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSLLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR GCA 90 bp CTGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACGTGTGTCTGTGTGTCTaGTTTGTTAATAAAGCAACT +
Preference number: 2 (lower is better)
Translates to: LRSSSWCEKEGRKVWLIYVCLCV*FVNKAT
Trigger: AGTTGCTTTATTAACAAAGCAGACACACAGACACAC...GTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp CTGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACCTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 2 (lower is better)
Translates to: LRSSSWCEKEGRKVWLIYLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...GTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAACTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 2 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR CCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAAGCTTCAAGTGTCTATaGGAGGCATGCACCACACCT +
Preference number: 2 (lower is better)
Translates to: IRGGCILQHKISLYPDTRSFKCL*EACTTP
Trigger: AGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCT...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTCTGTCATCAAGTCCCTaGAGAGCTGAGAGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: RGGCILQHKISLYPDTRSLSSSP*RAERQK
Trigger: TTTTTGCCTCTCAGCTCTCCAGGGACTTGATGACAG...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp TGTTTCCGTCCTTTGGCTATCTTGTCATGTCCAGTGGAGGAGCCCTTTGTAAGTGAAGGGAGAAAGGTTTaGCTCATTTACACAATGTTT +
Preference number: 2 (lower is better)
Translates to: CFRPLAILSCPVEEPFVSEGRKV*LIYTMF
Trigger: AAACATTGTGTAAATGAGCCAAACCTTTCTCCCTTC...ACTTACAAAGGGCTCCTCCACTGGACATGACAAGATAGCCAAAGGACGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR TCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTTCAAGTGAAAGAGGCTaGAGGCCTCACAGCTTTATT +
Preference number: 2 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLSSERG*RPHSFI
Trigger: AATAAAGCTGTGAGGCCTTCAGCCTCTTTCACTTGA...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR TCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGGCCTCAGCACATTTTaGGAAAGCCTCTCTGAGGCT +
Preference number: 2 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSGLSTF*ESLSEA
Trigger: AGCCTCAGAGAGGCTTTCTCAAAATGTGCTGAGGCC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR-3UTR GCA 90 bp ACAAACACCACCTCATTGACCATCTTAGTTCTTAGAGTTAACCTTAAACCCACCGAGCTGGAAACTCACTaGTTCATTCTCTTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: TNTTSLTILVLRVNLKPTELETH*FILFPA
Trigger: AGCTGGAAAGAGAATGAAGCAGTGAGTTTCCAGCTC...GGTGGGTTTAAGGTTAACTCTAAGAACTAAGATGGTCAATGAGGTGGTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTAAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR TCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGAAAGAGAGTACAATCATaGTCCTGCAGTCTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRKRVQS*SCSLFP
Trigger: TGGAAAAAGACTGCAGGATCATGATTGTACTCTCTT...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR TCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATTGAGAAAGCCTCTCTaGGGCTTTCTCAGGGAAATG +
Preference number: 2 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALLRKPL*GFLREM
Trigger: CATTTCCCTGAGAAAGCCTCAGAGAGGCTTTCTCAA...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR-3UTR GCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATACACCACACCTGCAGCTaGTTTTCTGGCCTTAACCAT +
Preference number: 2 (lower is better)
Translates to: TKYKGLQGNPNENQSINIHHTCS*FSGLNH
Trigger: ATGGTTAAGGCCAGAAAAGCAGCTGCAGGTGTGGTG...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTCATTGAACTCCATTTaGCACCCAAAACATGGCATT +
Preference number: 2 (lower is better)
Translates to: MRSQSMILLASAHFEKASSLNSI*HPKHGI
Trigger: AATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR CAA 90 bp GCATTCATGAATGCAATGAGTTGCATTAATTGTACACTAGACAATTaGGTTTCTCAACCAAATGGTCGTCTCTGTTTCCGTCCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: AFMNAMSCINCTLDN*VSQPNGRLCFRPLA
Trigger: AGCCAAAGGACGGAAACAGAGACGACCATTTGGTTGAGAAACCAAATTGTCTAGTGTACAATTAATGCAACTCATTGCATTCATGAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR TCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCATGGAAGTTAATATCCTaGGTATCTCAGAGAGCTGTT +
Preference number: 2 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSWKLIS*VSQRAV
Trigger: AACAGCTCTCTGAGATACTCAGGATATTAACTTCCA...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGCTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 2 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
3UTR-3UTR CCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCACTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 2 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR TCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACCGAGCTAGTTATAAATaGCAACTACAGGAAAACATG +
Preference number: 2 (lower is better)
Translates to: VDSLQLMHKYSIGILREYRASYK*QLQENM
Trigger: CATGTTTTCCTGTAGTTGTCATTTATAACTAGCTCG...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR GCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGACTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 2 (lower is better)
Translates to: IRGGCILQHKISLYPDTRLLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR GCA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCGTGTGTCTGTGTGTCTaGTTTGTTAATAAAGCAACT +
Preference number: 2 (lower is better)
Translates to: LFKNVEKGISSMEGPARSVCLCV*FVNKAT
Trigger: AGTTGCTTTATTAACAAAGCAGACACACAGACACAC...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR GCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTTATAAACATAGCACTTaGTACAGTTCTGAGGTTGTG +
Preference number: 2 (lower is better)
Translates to: RGGCILQHKISLYPDTRSYKHST*YSSEVV
Trigger: CACAACCTCAGAACTGTAGCAAGTGCTATGTTTATA...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCACTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 2 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
3UTR-3UTR GCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 2 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALLLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
3UTR-3UTR CCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: CILQHKISLYPDTRSVNFKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR GCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATACTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 2 (lower is better)
Translates to: TKYKGLQGNPNENQSINILLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CAA 90 bp GAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTaGCATGAGAATGAAGTTTCACTTGAATTTAAGCTGCAGATAAAT +
Preference number: 2 (lower is better)
Translates to: EFKSSSRGSRISLIC*HENEVSLEFKLQIN
Trigger: ATTTATCTGCAGCTTAAATTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR CCA 72 bp GGTCCCCTGGGGCACAGTGCACCGTCTGGAACTCCATaGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCC +
Preference number: 3 (lower is better)
Translates to: GPLGHSAPSGTP*PVPGGSHHWPA
Trigger: GGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR CCA 72 bp CCCAGGCACTCGGACCCTGGCGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTGGAGGCTGCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: PRHSDPGACSFA*SGTPEVEAAWK
Trigger: CTTCCAGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAGGGTCCGAGTGCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CCA 72 bp GCGCCTGTAGCTTTGCGTGGTCTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATACGGGCGTGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: APVALRGLAPRR*RLPGRIRAWQD
Trigger: GTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR TCA 72 bp GGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGAGGCTGTGGTTGGCGG +
Preference number: 3 (lower is better)
Translates to: GRIRAWQDSHAR*PRWPSRGCGWR
Trigger: CCGCCAACCACAGCCTCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR GCA 72 bp CGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGGTTCAGGTGCACGCAG +
Preference number: 3 (lower is better)
Translates to: RRQPSLASRKAG*SLNTLRFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR CCA 72 bp GCTGCCAGCCTGGCCTCTTTCTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAG +
Preference number: 3 (lower is better)
Translates to: AASLASFCCRNL*KRRRTGWSGGK
Trigger: CTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCTGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CCA 72 bp TTTGCGTGGTCTGGCACCCCGGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCAGGACTCTCACGCACG +
Preference number: 3 (lower is better)
Translates to: FAWSGTPEVEAA*KDTGVAGLSRT
Trigger: CGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGTGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 3 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPCSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR GCA 72 bp TCTGTGCCAACCCTGCGAACCAGGAGAGGTCAGCCCTaGCTTGCACAGACAACCGAGGGCCCAGCCCTGGGA +
Preference number: 3 (lower is better)
Translates to: SVPTLRTRRGQP*LAQTTEGPALG
Trigger: TCCCAGGGCTGGGCCCTCGGTTGTCTGTGCAAGGCAGGGCTGACCTCTCCTGGTTCGCAGGGTTGGCACAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp CCGGAGGTGGAGGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 3 (lower is better)
Translates to: PEVEAAWKDTGVAGLSRTVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...CGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR TCA 72 bp AGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGTGCACGCAGATGTCGG +
Preference number: 3 (lower is better)
Translates to: SHHWPAGRPGAP*TPCGSGARRCR
Trigger: CCGACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR CCA 72 bp GAATGCTTGACCTCTGCCAGGATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCCACGTTGTCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: ECLTSARMGLRS*GLLASPTLSRR
Trigger: GCGCCTGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp TCGGAATCTCTGGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: SESLEEAPDRVVRGQDQGVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...CCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 3 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR-3UTR CAA 90 bp CAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCTCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 3 (lower is better)
Translates to: QASLKRAQLLRLAQSPPPSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR CCA 72 bp TCACGCACGGTGACCACGCTGGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCTGTAAGGACATTGCCC +
Preference number: 3 (lower is better)
Translates to: SRTVTTLAFTRL*LAEACSVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGCCAGCGTGGTCACCGTGCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp GCCTTCACGAGGCTGTGGTTGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTCGGAGCAGGCTATGGGTaGCACCGCAGAGAACCCCTG +
Preference number: 3 (lower is better)
Translates to: AFTRLWLAEACSVRTLPFGAGYG*HRREPL
Trigger: CAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCC...GAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR TCA 72 bp GCAGCGTCTGCTCAGGGATGGGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGACTCCGATCCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: AASAQGWGRTNA*PLPGWDSDPGD
Trigger: GTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACCCCATCCCTGAGCAGACGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 3 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR TCA 72 bp AGCAGAGGCTGTCAACGCTCTCTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGTGCACCGTCTGGAACT +
Preference number: 3 (lower is better)
Translates to: SRGCQRSLLHGR*GPLGHSAPSGT
Trigger: AGTTCCAGACGGTGCACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAGAGAGCGTTGACAGCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR CCA 72 bp GAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTaGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTG +
Preference number: 3 (lower is better)
Translates to: EEQAMGCTAENP*ILRAPLQLLPL
Trigger: CAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CCA 72 bp GGTGACCATGAGGCAGTGAAGTGTCCCCGAGCATCGTaGCATAGGGGCTTGGATGGCCCATACGCAGTTCTG +
Preference number: 3 (lower is better)
Translates to: GDHEAVKCPRAS*HRGLDGPYAVL
Trigger: CAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGCCTCATGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWEVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp TCGGAATCTCTGGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGTCCCTCAAGCTCTGCTaGTCCCGAGCTAGTTATAAA +
Preference number: 3 (lower is better)
Translates to: SESLEEAPDRVVRGQDQGSLKLC*SRASYK
Trigger: TTTATAACTAGCTCGGGACAAGCAGAGCTTGAGGGA...CCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR-3UTR CAA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGTGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 3 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR-3UTR CAA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 3 (lower is better)
Translates to: NSMASARRQPSLASRKAGWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR-3UTR CAA 90 bp CTTGACCTCTGCCAGGATGGGACTCCGATCCTGGGGACTCCTGGCCTCACCCACTGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 3 (lower is better)
Translates to: LDLCQDGTPILGTPGLTHCSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...GTGGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCCTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 3 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR TCA 72 bp ATCAGCCGGGAGGAGCACGTTCAACCAGCAGCCAAGTaGCAGGGACAGGACCTACCCTCTTCAAAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: ISREEHVQPAAK*QGQDLPSSKQP
Trigger: AGGCTGCTTTGAAGAGGGTAGGTCCTGTCCCTGTCACTTGGCTGCTGGTTGAACGTGCTCCTCCCGGCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 72 bp ACGCTGGCCTTCACGAGGCTGTGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCCTTCTCCACATCTAGG +
Preference number: 3 (lower is better)
Translates to: TLAFTRLWLAEA*SVRTLPFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGCCAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp ATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCCACAGTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 3 (lower is better)
Translates to: IGAWMAHTQFCDHHWEPQFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...CTGTGGCTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR TCA 72 bp CCTTGTTCCAGTCCTCACTCTTCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGC +
Preference number: 3 (lower is better)
Translates to: PCSSPHSSRKHL*SGPSFCAWHNR
Trigger: GCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAGAGTGAGGACTGGAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTAGATGCCGGGAAGTCCTaGGCCCACTGCAGTCCATGG +
Preference number: 3 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLDAGKS*AHCSPW
Trigger: CCATGGACTGCAGTGGGCCAAGGACTTCCCGGCATC...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTCTCCAGCTCTTACCCTaGCCTCACCTCCTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSLQLLP*PHLLWG
Trigger: TCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAG...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR TCA 72 bp CTGGAGAAGCCAGGGGCAGCCCCTGTAAGCCTGATGTaGGAAGCTACATATGAGGTTAGGGCTCATGGAGCA +
Preference number: 3 (lower is better)
Translates to: LEKPGAAPVSLM*EATYEVRAHGA
Trigger: TGCTCCATGAGCCCTAACCTCATATGTAGCTTCTCACATCAGGCTTACAGGGGCTGCCCCTGGCTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR TCA 72 bp GAACAGATTCCTGCCGCAGGAGCTGGCTTCCAGTCATaGGCCCAGTTTGCGCTGATTCACGAGTGCATTCCT +
Preference number: 3 (lower is better)
Translates to: EQIPAAGAGFQS*AQFALIHECIP
Trigger: AGGAATGCACTCGTGAATCAGCGCAAACTGGGCTCATGACTGGAAGCCAGCTCCTGCGGCAGGAATCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 72 bp CTCTCTCTAGGGCATATGCCCCGGCCAGCTCCACTGTaGCTGGAAGAGACTTCACTCCTTTCCTTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: LSLGHMPRPAPL*LEETSLLSFLR
Trigger: TCTGAGAAAGGAAAGGAGTGAAGTCTCTTCCAGGCACAGTGGAGCTGGCCGGGGCATATGCCCTAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR GCA 72 bp GGGAAATGGCAGGGCCTCTTGACATTGACCGTTGGGTaGCAGACAAGAAGCCTGTCATCAAGTCCCTGGAGA +
Preference number: 3 (lower is better)
Translates to: GKWQGLLTLTVG*QTRSLSSSPWR
Trigger: TCTCCAGGGACTTGATGACAGGCTTCTTGTCTGGCACCCAACGGTCAATGTCAAGAGGCCCTGCCATTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CCA 72 bp TGGAGGGAAATGGCAGGGCCTCTTGACATTGACCGTTaGGTGCCAGACAAGAAGCCTGTCATCAAGTCCCTG +
Preference number: 3 (lower is better)
Translates to: WREMAGPLDIDR*VPDKKPVIKSL
Trigger: CAGGGACTTGATGACAGGCTTCTTGTCTGGCACCCAACGGTCAATGTCAAGAGGCCCTGCCATTTCCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAGGAGCAGGCTATGGGTaGCACCGCAGAGAACCCCTG +
Preference number: 3 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKGAGYG*HRREPL
Trigger: CAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCC...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR TCA 72 bp GGTGGGCAGTCTCAGACCGGAGGCTCTCAGAAACACTaGATATCTTTGGTAGGGCAGAGGTACCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: GGQSQTGGSQKH*ISLVGQRYQEW
Trigger: CCATTCCTGGTACCTCTGCCCTACCAAAGATATTCAGTGTTTCTGAGAGCCTCCGGTCTGAGACTGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR TCA 72 bp CAGGAGCTGGCTTCCAGTCATGAGCCCAGTTTGCGCTaGTTCACGAGTGCATTCCTAAAGCTACATTCCCCC +
Preference number: 3 (lower is better)
Translates to: QELASSHEPSLR*FTSAFLKLHSP
Trigger: GGGGGAATGTAGCTTTAGGAATGCACTCGTGAATCAGCGCAAACTGGGCTCATGACTGGAAGCCAGCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR TCA 72 bp AATGGTTTATACTGGAAGGCTCAGGTCACTGGTATCTaGGGCACATGGTCCTGGCTCGGGAACCCAGAGTGG +
Preference number: 3 (lower is better)
Translates to: NGLYWKAQVTGI*GTWSWLGNPEW
Trigger: CCACTCTGGGTTCCCGAGCCAGGACCATGTGCCTCAGATACCAGTGACCTGAGCCTTCCAGTATAAACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CCA 72 bp GAAGGAGACCTGAGGATTCCCAGCTTCAAGTGTCTATaGGAGGCATGCACCACACCTGCAGCTGCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: EGDLRIPSFKCL*EACTTPAAAFL
Trigger: CAGAAAAGCAGCTGCAGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCTGGGAATCCTCAGGTCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 3 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 3 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR CAA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGATGCCGGGAAGTCCTaGGCCCACTGCAGTCCATGG +
Preference number: 3 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSDAGKS*AHCSPW
Trigger: CCATGGACTGCAGTGGGCCAAGGACTTCCCGGCATC...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp CAACGTGTATCTCCACCAGGGCTCCTAAAATTTCCCAGAGTATGCATGGGAGACTCGTGGCATAGGGGCTaGGATGGCCCATACGCAGTT +
Preference number: 3 (lower is better)
Translates to: QRVSPPGLLKFPRVCMGDSWHRG*DGPYAV
Trigger: AACTGCGTATGGGCCATCCAAGCCCCTATGCCACGA...GTCTCCCATGCATACTCTGGGAAATTTTAGGAGCCCTGGTGGAGATACACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 3 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR-3UTR CAA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 3 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR TCA 72 bp GCCTTATACCATCTTTGCCCCTCATACCCAGAGGTCTaGGAAATTTCACGGACATCCGTCTCCCTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: ALYHLCPSYPEV*EISRTSVSLRQ
Trigger: CTGCCTGAGGGAGACGGATGTCCGTGAAATTTCTCAGACCTCTGGGTATGAGGGGCAAAGATGGTATAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR GCA 72 bp AATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTACCCTTCCCATATCTTT +
Preference number: 3 (lower is better)
Translates to: NCAKTVQMQLPP*RVGARYPSHIF
Trigger: AAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
3UTR-3UTR CAA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
3UTR-3UTR CAA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: IINGRACTFLLTFPSHRYVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR CAA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 3 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR CAA 90 bp ATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCCACAGGTCTGTGTGTCTGCTTaGTTAATAAAGCAACTCTGG +
Preference number: 3 (lower is better)
Translates to: IGAWMAHTQFCDHHWEPQVCVSA*LIKQLW
Trigger: CCAGAGTTGCTTTATTAACAAAGCAGACACACAGAC...CTGTGGCTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR TCA 72 bp GCATGGCTCCCAAGTGCCTATAATGACCCCGTGCGGTaGACAAAATACAAAGGTCTGCAGGGCAATCCCAAT +
Preference number: 3 (lower is better)
Translates to: AWLPSAYNDPVR*TKYKGLQGNPN
Trigger: ATTGGGATTGCCCTGCAGACCTTTGTATTTTGTTCACCGCACGGGGTCATTATAGGCACTTGGGAGCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR GCA 72 bp CAGCTTCAAGTGTCTATGGGAGGCATGCACCACACCTaGAGCTGCTTTTCTGGCCTTAACCATGAGACAGAA +
Preference number: 3 (lower is better)
Translates to: QLQVSMGGMHHT*SCFSGLNHETE
Trigger: TTCTGTCTCATGGTTAAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR CCA 72 bp AGGCAGTCAGCACAAAGCAGCCTGCGGTCAAGTTCATaGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATT +
Preference number: 3 (lower is better)
Translates to: RQSAQSSLRSSS*CEKEGRKVWLI
Trigger: AATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAGGCTGCTTTGTGCTGACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 3 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGATGCCGGGAAGTCCTaGGCCCACTGCAGTCCATGG +
Preference number: 3 (lower is better)
Translates to: KICELLIEQLMDPSDDSEDAGKS*AHCSPW
Trigger: CCATGGACTGCAGTGGGCCAAGGACTTCCCGGCATC...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACACAGAATGCTTTAGGTaGTGTGTGGTGGCTCACACC +
Preference number: 3 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHTECFR*CVVAHT
Trigger: GGTGTGAGCCACCACACACAACCTAAAGCATTCTGT...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640710.1
3UTR GCA 72 bp CAAGTGTCTATGGGAGGCATGCACCACACCTGCAGCTaGTTTTCTGGCCTTAACCATGAGACAGAAAGTTTC +
Preference number: 3 (lower is better)
Translates to: QVSMGGMHHTCS*FSGLNHETESF
Trigger: GAAACTTTCTGTCTCATGGTTAAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCCTCCCATAGACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR GCA 72 bp ACCCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCAGCTGCCACCTTGCAG +
Preference number: 3 (lower is better)
Translates to: TPLDSMSLLPKL*KDGSDAAATLQ
Trigger: CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
3UTR GCA 72 bp GAGCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCAGCTGCCACCTTGCAG +
Preference number: 3 (lower is better)
Translates to: EPLDSMSLLPKL*KDGSDAAATLQ
Trigger: CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640528.1
3UTR CCA 72 bp GGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTaGTTGGCAGCTTCTCAAGTGAAAGAGGCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: GFQIFYGLLPKD*LAASQVKEAEG
Trigger: GCCTTCAGCCTCTTTCACTTGAGAAGCTGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCGCTGAACTTCTAACCTaGCGTGTCAGTATTTGGGGT +
Preference number: 3 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPAELLT*RVSIWG
Trigger: ACCCCAAATACTGACACGCAAGGTTAGAAGTTCAGC...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp CACTTACTAGATAATGGTGCCACATATCATGCCCCGACTCCTCAAAGAGGAAAAAAATGGCAGGGCCTCTaGACATTGACCGTTGGGTGC +
Preference number: 3 (lower is better)
Translates to: HLLDNGATYHAPTPQRGKKWQGL*TLTVGC
Trigger: GCACCCAACGGTCAATGTCAAGAGGCCCTGCCATTT...TTTTCCTCTTTGAGGAGTCGGGGCATGATATGTGGCACCATTATCTAGTAAGTG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp AAAATTTCCCAGAGTATGCATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAAAAATGGCAGGGCCTCTaGACATTGACCGTTGGGTGC +
Preference number: 3 (lower is better)
Translates to: KISQSMHGRHSGQCNKGKKWQGL*TLTVGC
Trigger: GCACCCAACGGTCAATGTCAAGAGGCCCTGCCATTT...TTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp ATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCCACAGAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAG +
Preference number: 3 (lower is better)
Translates to: IGAWMAHTQFCDHHWEPQSCFSI*VILAFK
Trigger: CTTAAACGCCAAAATGACCAATATTGAGAAACAGCT...CTGTGGCTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR TCA 72 bp GAGCTAGTTATAAATGACAACTACAGGAAAACATGGTaGCGTCAGACACGGGCTGTACAAGGACGGGGATGC +
Preference number: 3 (lower is better)
Translates to: ELVINDNYRKTW*RQTRAVQGRGC
Trigger: GCATCCCCGTCCTTGTACAGCCCGTGTCTGACGTCACCATGTTTTCCTGTAGTTGTCATTTATAACTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
3UTR TCA 72 bp GTTTCTCAATATTGGTCATTTTGGCGTTTAAGGCCTTaGTGTCCTCCTTCAGCTCGTGCCTCACCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: VSQYWSFWRLRP*CPPSARASPPG
Trigger: TCCTGGAGGTGAGGCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR GCA 72 bp TACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCAGCTGCCACCTTGCAG +
Preference number: 3 (lower is better)
Translates to: YPLDSMSLLPKL*KDGSDAAATLQ
Trigger: CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp AAGGAGAAGCCCCAGAATGATGAACTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCCCTCAAGCTCTGCTaGTCCCGAGCTAGTTATAAA +
Preference number: 3 (lower is better)
Translates to: KEKPQNDELLISRSVLEVSLKLC*SRASYK
Trigger: TTTATAACTAGCTCGGGACAAGCAGAGCTTGAGGGA...CACCTCAAGGACACTTCTACTTATGAGCAGTTCATCATTCTGGGGCTTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 3 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
3UTR-3UTR CAA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 3 (lower is better)
Translates to: QSGTCREFKSSSRGSRISSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR CAA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGAGATGTTTTGCAACATaGAAGAGATCAGACAGAATG +
Preference number: 3 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGRCFAT*KRSDRM
Trigger: CATTCTGTCTGATCTCTTCAATGTTGCAAAACATCT...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
3UTR TCA 72 bp GTTTCATGCGTTCTTCCTCTTCACGTTTCACATCGCTaGTCTTCCGGAACACAATCCTCTTCCTCAAGTTGT +
Preference number: 3 (lower is better)
Translates to: VSCVLPLHVSHR*SSGTQSSSSSC
Trigger: ACAACTTGAGGAAGAGGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTGAAGAGGAAGAACGCATGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR TCA 72 bp ATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTaGTTCTGGGGACTGTGGCCTCGATATTTCAAACAA +
Preference number: 3 (lower is better)
Translates to: IDLSAGSKNVSL*FWGLWPRYFKQ
Trigger: TTGTTTGAAATATCGAGGCCACAGTCCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR GCA 72 bp TTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTaGTTCATTCTCTTTCCAGCTCCTGAAGAGAGTACA +
Preference number: 3 (lower is better)
Translates to: FSPSPYRELETH*FILFPAPEEST
Trigger: TGTACTCTCTTCAGGAGCTGGAAAGAGAATGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CCA 72 bp AACTTCAGAAGCAGGTTGAGGAGCATGTTTAAGAAATaGCAGACTAGAATGTTAGGGGGCAGCCAACAGATG +
Preference number: 3 (lower is better)
Translates to: NFRSRLRSMFKK*QTRMLGGSQQM
Trigger: CATCTGTTGGCTGCCCCCTAACATTCTAGTCTGCCATTTCTTAAACATGCTCCTCAACCTGCTTCTGAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CCA 72 bp AGTCCCCACAAGGGCCTGGACAAAGAGCTTGACAGTTaGCATAATACTTCTACCTTCCATTTAAGGATTTGG +
Preference number: 3 (lower is better)
Translates to: SPHKGLDKELDS*HNTSTFHLRIW
Trigger: CCAAATCCTTAAATGGAAGGTAGAAGTATTATGCCAACTGTCAAGCTCTTTGTCCAGGCCCTTGTGGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: TKYKGLQGNPNENQSINIVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATACTCCAGCTCTTACCCTaGCCTCACCTCCTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: TKYKGLQGNPNENQSINILQLLP*PHLLWG
Trigger: TCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAG...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR TCA 72 bp GCTGGAAACTCACTGCTTCATTCTCTTTCCAGCTCCTaGAGAGAGTACAATCATGATCCTGCAGTCTTTTTC +
Preference number: 3 (lower is better)
Translates to: AGNSLLHSLSSS*REYNHDPAVFF
Trigger: GAAAAAGACTGCAGGATCATGATTGTACTCTCTTCAGGAGCTGGAAAGAGAATGAAGCAGTGAGTTTCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp AATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGACTGTGTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 3 (lower is better)
Translates to: NRPLSWLQKCLSLILGTVLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...CACAGTCCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CCA 72 bp AGTTGGCATAATACTTCTACCTTCCATTTAAGGATTTaGAGAGGAAGCTTGCTGAATGGGATGGGGTGGTAT +
Preference number: 3 (lower is better)
Translates to: SWHNTSTFHLRI*RGSLLNGMGWY
Trigger: ATACCACCCCATCCCATTCAGCAAGCTTCCTCTCCAAATCCTTAAATGGAAGGTAGAAGTATTATGCCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp GCTGAAGGCCTCACAGCTTTATTCAAAGTCACAGATAGTTGTGACTCGGCCTTATTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 3 (lower is better)
Translates to: AEGLTALFKVTDSCDSALLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...TAAGGCCGAGTCACAACTATCTGTGACTTTGAATAAAGCTGTGAGGCCTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCATCATTGAACTCCATTaGGCACCCAAAACATGGCAT +
Preference number: 3 (lower is better)
Translates to: NMRSQSMILLASAHFEKAIIELH*APKTWH
Trigger: ATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGAT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR CCA 72 bp GCTTGTTTAAAAATGTTGAGAAGGGAATATCATCAATaGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAG +
Preference number: 3 (lower is better)
Translates to: ACLKMLRREYHQ*KGLHVPLNIPK
Trigger: CTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR CAA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACCCAATAAAGGATTaGGCAGGACTCAATGGAAAG +
Preference number: 3 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLNPIKD*AGLNGK
Trigger: CTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCACAGAATGCTTTAGGTaGTGTGTGGTGGCTCACACC +
Preference number: 3 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSTECFR*CVVAHT
Trigger: GGTGTGAGCCACCACACACAACCTAAAGCATTCTGT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR-3UTR CAA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 3 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
3UTR-3UTR CAA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTAGATGTTTTGCAACATaGAAGAGATCAGACAGAATG +
Preference number: 3 (lower is better)
Translates to: MRSQSMILLASAHFEKASRCFAT*KRSDRM
Trigger: CATTCTGTCTGATCTCTTCAATGTTGCAAAACATCT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR CCA 72 bp AATGCATTTCCAAAAGTTTGCTGGAAGGCTGCTAAATaGGCTCAGCTTTTTAAATACTTGGGCTATCCTGTA +
Preference number: 3 (lower is better)
Translates to: NAFPKVCWKAAK*AQLFKYLGYPV
Trigger: TACAGGATAGCCCAAGTATTTAAAAAGCTGAGCCCATTTAGCAGCCTTCCAGCAAACTTTTGGAAATGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR-3UTR CAA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCATTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 3 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGALGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR TCA 72 bp GTGAACAAAATACAAAGGTCTGCAGGGCAATCCCAATaGGAATCAAAGTATAAACATAGCACTTGCTACAGT +
Preference number: 3 (lower is better)
Translates to: VNKIQRSAGQSQ*ESKYKHSTCYS
Trigger: ACTGTAGCAAGTGCTATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR-3UTR CAA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 3 (lower is better)
Translates to: IRGGCILQHKISLYPDTRLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR-3UTR CAA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATATCAATATTGGTCATTTaGGCGTTTAAGGCCTTGATG +
Preference number: 3 (lower is better)
Translates to: TKYKGLQGNPNENQSINISILVI*AFKALM
Trigger: CATCAAGGCCTTAAACGCCAAAATGACCAATATTGA...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCAGATGTTTTGCAACATaGAAGAGATCAGACAGAATG +
Preference number: 3 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSRCFAT*KRSDRM
Trigger: CATTCTGTCTGATCTCTTCAATGTTGCAAAACATCT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR GCA 72 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATaGTTGCATGAGAATGAAGTTTCACTTGAATTTAAG +
Preference number: 3 (lower is better)
Translates to: KSSSRGSRISLI*LHENEVSLEFK
Trigger: CTTAAATTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR CCA 72 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATaGCATTCATTACTTAGCTCTATATTACTCGTCCTT +
Preference number: 3 (lower is better)
Translates to: FKIIELHLAPKT*HSLLSSILLVL
Trigger: AAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAAGCTCGAAGCGCCCCATaGGCCCGGCGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLEARSAP*ARRGSA
Trigger: TGCGGATCCCCGCCGGGCGCATGGGGCGCTTCGAGC...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
3UTR CAA 72 bp TGGGGCCCAGGCACTCGGACCCTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGGAGGTGGAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: WGPGTRTLAPVA*RGLAPRRWRLP
Trigger: AGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAGGGTCCGAGTGCCTGGGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGCTCGAAGCGCCCCATaGGCCCGGCGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: GCLEGYGRGRTLTHGDHAARSAP*ARRGSA
Trigger: TGCGGATCCCCGCCGGGCGCATGGGGCGCTTCGAGC...AGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAG +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPVRRAS*RGFLRQ
Trigger: CTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGAC...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: NSMASARRQPSLASRKAGGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGACGACAGCAGGAAACTaGCCTCGGGGCCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPTTAGN*PRGPHA
Trigger: TGCGTGCGGGCCCCGAGGCCAGTTTCCTGCTGTCGT...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGGCGGCTCCCTCTGGCTaGTACCCTCGCGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQAAPSG*YPRALF
Trigger: GAAGAGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGC...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR CCA 90 bp GGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCACGAGGCTGTGGACGACAGCAGGAAACTaGCCTCGGGGCCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: GVAGLSRTVTTLAFTRLWTTAGN*PRGPHA
Trigger: TGCGTGCGGGCCCCGAGGCCAGTTTCCTGCTGTCGT...CCACAGCCTCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR TCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NSMASARRQPSLASRKAGRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAAACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLETLGAS*CRTPLL
Trigger: CAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGT...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTGCTGGCGGCTCCCTCTaGCTGCTACCCTCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: AGREGTHQSGTCREFKSSAGGSL*LLPSRP
Trigger: AGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGCCAGC...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCGCTGGCGGCTCCCTCTaGCTGCTACCCTCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVAGGSL*LLPSRP
Trigger: AGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGCCAGC...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR CCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NSMASARRQPSLASRKAGAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCACGAGGCTGTGGGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: GVAGLSRTVTTLAFTRLWEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...CCACAGCCTCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGCTGCAGGACACCCCTaGTGCTTGTCAGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPAAGHP*CLSVLL
Trigger: CAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGC...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLELGASC*RTPLLL
Trigger: AAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAG...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAAGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLEELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTCTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: GCLEGYGRGRTLTHGDHALAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...AGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp GGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GCLEGYGRGRTLTHGDHAACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...AGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCAGCGGCTCCCTCTGGCTaGTACCCTCGCGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYAAAPSG*YPRALF
Trigger: GAAGAGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGC...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVTLGAS*CRTPLL
Trigger: CAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGT...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAATCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLESARRE*LWTFSP
Trigger: AGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGA...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVSGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGCGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPRMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGCCTCTTGCTTGTACTaGGGAAGGATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPASCLY*GRMSEP
Trigger: GGGCTCAGACATCCTTCCCCAGTACAAGCAAGAGGC...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGCTCTCTCCCCTCCAGTaGTGGTGGAATCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPLSPLQ*WWNLIS
Trigger: GCTGATCAGATTCCACCACCACTGGAGGGGAGAGAG...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR CCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGACATTGGCACAGGACTaGGCAAGGGTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: NSMASARRQPSLASRKAGTLAQD*ARVASF
Trigger: GAAGGAAGCCACCCTTGCCCAGTCCTGTGCCAATGT...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp CCTGTAGCTTTGCGTGGTCTGGCACCCCGGAGGTGGAGGCTGCCTGGAAGGATACCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: PVALRGLAPRRWRLPGRIPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAAGCTACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CAA 72 bp CAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTaGAACACCTTGCGGTTCAGGTGCACGCAGATGTCG +
Preference number: 4 (lower is better)
Translates to: QPSLASRKAGCS*NTLRFRCTQMS
Trigger: CGACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPTFSPF*TLGASC
Trigger: GCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAAAGGGGGAGTCTTTGGTaGCTCTTGCTTGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLERGSLW*LLLVLG
Trigger: CCCCAGTACAAGCAAGAGGCACCAAAGACTCCCCCT...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAAGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLEVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp TTCAGCTCGTGCCTCACCTCCAGGACTGTGGCCTGCAGCGTCTGCTCAGGGATGAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: FSSCLTSRTVACSVCSGMSGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGAGGTGAGGCACGAGCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLEQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR GCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCGTACAAGGACGGGGATaGCGGGAAGTCCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVVQGRG*REVLGP
Trigger: TGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTAC...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GCCTTCACGAGGCTGTGGTTGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTCGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAG +
Preference number: 4 (lower is better)
Translates to: AFTRLWLAEACSVRTLPFVRRAS*RGFLRQ
Trigger: CTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGAC...GAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGAGGCGGGAGTGCTTGTaGACATTCTCGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPRRECL*TFSPFC
Trigger: GCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCT...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGCCCCTCCAGTGGTGGTaGAATCTGATCAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: NSMASARRQPSLASRKAGPLQWW*NLISKT
Trigger: GGTTTTGCTGATCAGATTCCACCACCACTGGAGGGG...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR CCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGAGGACTGGGCAAGGGTaGCTTCCTTCCAGAACACAT +
Preference number: 4 (lower is better)
Translates to: NSMASARRQPSLASRKAGRTGQG*LPSRTH
Trigger: ATGTGTTCTGGAAGGAAGCCACCCTTGCCCAGTCCT...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: AGREGTHQSGTCREFKSSEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCCCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGCTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPLSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR TCA 90 bp TTCAGCTCGTGCCTCACCTCCAGGACTGTGGCCTGCAGCGTCTGCTCAGGGATGCTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: FSSCLTSRTVACSVCSGMLLHGR*GPLGHS
Trigger: ACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAG...CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGAGGTGAGGCACGAGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCCTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVLLHGR*GPLGHS
Trigger: ACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAG...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp AGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGCGGCTCCCTCTGGCTaGTACCCTCGCGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: REGTHQSGTCREFKSSSRAAPSG*YPRALF
Trigger: GAAGAGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGC...TCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCTCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVSPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFSGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGGCCTTTTTGCACGCTTaGAGCCAGCTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRAFLHA*SQLLQD
Trigger: GTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGC...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGAATCACCTCCCCTGCTaGTCCAACAAAGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPNHLPC*SNKGGM
Trigger: CATACCACCTTTGTTGGACCAGCAGGGGAGGTGATT...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGACATTGGCACAGGACTaGGCAAGGGTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQTLAQD*ARVASF
Trigger: GAAGGAAGCCACCCTTGCCCAGTCCTGTGCCAATGT...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp CTGGCCTCACCCACGTTGTCCAGGCGCAAGTCGCTCTTGGTGATGCCACTGTCAGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: LASPTLSRRKSLLVMPLSGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...TGACAGTGGCATCACCAAGAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGREGTHQSGTCREFKSSDPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
3UTR CAA 72 bp CGCACGGTGACCACGCTGGCCTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RTVTTLAFTRLW*AEACSVRTLPF
Trigger: GAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGCCAGCGTGGTCACCGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp TGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: WKDTGVAGLSRTVTTLAFGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...GAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR TCA 90 bp TCGGAATCTCTGGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGCAGTATTTGGGGTCCTaGCACCTCTCTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SESLEEAPDRVVRGQDQGQYLGS*HLSLGH
Trigger: ATGCCCTAGAGAGAGGTGTCAGGACCCCAAATACTG...CCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR GCA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGCCTGCTGCTTGTCAGTaGTCTTGTCAGCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQPAACQ*SCQPSK
Trigger: TTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGG...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRAGHPC*LSVLLS
Trigger: TGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGC...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTGCTGCAGGACACCCCTaGTGCTTGTCAGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AGREGTHQSGTCREFKSSAAGHP*CLSVLL
Trigger: CAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGC...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CCGGAGGTGGAGGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTCTTTGGTGCCTCTTaGTTGTACTGGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: PEVEAAWKDTGVAGLSRTVFGAS*LYWGRM
Trigger: CATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGAC...CGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR GCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCAGGGGGAGTCTTTGGTaGCTCTTGCTTGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVRGSLW*LLLVLG
Trigger: CCCCAGTACAAGCAAGAGGCACCAAAGACTCCCCCT...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TCGGAATCTCTGGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGTCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SESLEEAPDRVVRGQDQGSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...CCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp CAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QASLKRAQLLRLAQSPPPTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GCCTTCACGAGGCTGTGGTTGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTCGCCCCCTCTCTCAGCTaGCAGCCTGGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: AFTRLWLAEACSVRTLPFAPSLS*QPGLFL
Trigger: CAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGC...GAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACGTACAAGGACGGGGATaGCGGGAAGTCCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENVQGRG*REVLGP
Trigger: TGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTAC...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAATCTCCCCTCCAGTGGTaGTGGAATCTGATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLESPLQW*WNLISK
Trigger: TTTGCTGATCAGATTCCACCACCACTGGAGGGGAGA...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR CCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCAGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYADPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFDPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp CTGGCCTCACCCACGTTGTCCAGGCGCAAGTCGCTCTTGGTGATGCCACTGTCATGTCCCCGAGCATCGTaGCATAGGGGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: LASPTLSRRKSLLVMPLSCPRAS*HRGLDG
Trigger: GCCATCCAAGCCCCTATGCCACGATGCTCGGGGACA...TGACAGTGGCATCACCAAGAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCATCCTGCCGCAGGAGCTaGCTTCCAGTCATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYASCRRS*LPVMSP
Trigger: TGGGCTCATGACTGGAAGCCAGCTCCTGCGGCAGGA...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTCACATTCCCGAAGATaGTGGCATAGAGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NSMASARRQPSLASRKAGSHSRR*WHREVL
Trigger: CAGCACTTCTCTATGCCACCATCTTCGGGAATGTGA...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640522.1
3UTR CAA 72 bp CTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTaGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPVNCPRGAGYG*HRREPLDLKGP
Trigger: GGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGAGTGGTGGTGGAATCTaGTCAGCAAAACCAATCTTC +
Preference number: 4 (lower is better)
Translates to: NSMASARRQPSLASRKAGSGGGI*SAKPIF
Trigger: GAAGATTGGTTTTGCTGATCAGATTCCACCACCACT...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR TCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWELLHGR*GPLGHS
Trigger: ACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAG...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR TCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTCAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp CTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTGGGTGACCATGAGGCAGTaGAGTGTCCCCGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: LSTVPEEQAMGCTAENPWVTMRQ*SVPEHR
Trigger: ACGATGCTCGGGGACACTTCACTGCCTCATGGTCAC...CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCGGCATAGAGAAGTGCTaGCTCTCTCTCCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVGIEKC*LSLPSS
Trigger: ACTGGAGGGGAGAGAGAGTCAGCACTTCTCTATGCC...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR GCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGCTCGAAGCGCCCCATaGGCCCGGCGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQARSAP*ARRGSA
Trigger: TGCGGATCCCCGCCGGGCGCATGGGGCGCTTCGAGC...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCAGGGGGAGTCTTTGGTaGCTCTTGCTTGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: QASLKRAQLLRLAQSPPPRGSLW*LLLVLG
Trigger: CCCCAGTACAAGCAAGAGGCACCAAAGACTCCCCCT...GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR GCA 90 bp GGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTTCTCATAGTCCCCAATaGTGTACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GCLEGYGRGRTLTHGDHASHSPQ*CTRCRP
Trigger: TGGCCTGCATCTGGTACAGCATTGGGGACTATGAGA...AGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR GCA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp ATGGGTTGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTAAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: MGCTAENPWILRAPLQLLSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...TAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWEELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGTCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWESPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: EPLDLKGPSPALTLASPPSRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTCCTCCTTCAGCTCGTaGCTCACCTCCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFSSFSS*LTSRTV
Trigger: CACAGTCCTGGAGGTGAGGCACGAGCTGAAGGAGGA...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTGTCTATGGGAGGCATaGACCACACCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGREGTHQSGTCREFKSSCLWEA*TTPAAA
Trigger: AGCAGCTGCAGGTGTGGTGCATGCCTCCCATAGACA...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGCAGGCGCCGGACAGGGTaGTCCGGGGGCAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: QVALGDATVTRVCLLQCGRRRTG*SGGKIR
Trigger: CCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCT...GCCACACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACAGGCGCCGGACAGGGTaGTCCGGGGGCAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHRRRTG*SGGKIR
Trigger: CCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCT...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWEAFTRL*LAEACS
Trigger: AGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGATGCCGGGAAGTCCTTaGCCCACTGCAGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWEMPGSP*PTAVHG
Trigger: CCCATGGACTGCAGTGGGCCAAGGACTTCCCGGCAT...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TCGGAATCTCTGGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGAGCTTCAAGTGTCTATaGGAGGCATGCACCACACCT +
Preference number: 4 (lower is better)
Translates to: SESLEEAPDRVVRGQDQGSFKCL*EACTTP
Trigger: AGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCT...CCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCTGCCATGGGGACACTTaGGAAGAGGCCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVCHGDT*EEAKKE
Trigger: TTCCTTCTTGGCCTCTTCCCAAGTGTCCCCATGGCA...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCGGGCACCCACCAGTCTaGCACCTGCAGGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFGHPPV*HLQGIQ
Trigger: TTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCC...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TCGGAATCTCTGGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGAAAAATGTCTCTCTCTaGTTCTGGGGACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SESLEEAPDRVVRGQDQGKNVSL*FWGLWP
Trigger: AGGCCACAGTCCCCAGAATCAGAGAGAGACATTTTT...CCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCTACAGGAAAACATGGTaGCGTCAGACACGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVYRKTW*RQTRAV
Trigger: TACAGCCCGTGTCTGACGTCACCATGTTTTCCTGTA...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTGAGACAGAAAGTTTCTaGGCTCTACCCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AGREGTHQSGTCREFKSSETESF*ALPSCP
Trigger: GGGACAGGAGGGTAGAGCTCAGAAACTTTCTGTCTC...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACTTCCAGGAAAGGGGCTaGTGTTTGGCCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENFQERG*CLANSS
Trigger: GCTGCTGTTGGCCAAACATCAGCCCCTTTCCTGGAA...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAGCTCGAAGCGCCCCATaGGCCCGGCGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKARSAP*ARRGSA
Trigger: TGCGGATCCCCGCCGGGCGCATGGGGCGCTTCGAGC...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: WKDTGVAGLSRTVTTLAFRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...GAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp CTTCCCGCAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCGCAGGCCATCCAGTGTaGAGCCAGCCCAAACACACA +
Preference number: 4 (lower is better)
Translates to: LPASIFEAGPAFALGTIAAGHPV*SQPKHT
Trigger: TGTGTGTTTGGGCTGGCTGCACACTGGATGGCCTGC...GGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR GCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDSGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGSRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp GCCTTCACGAGGCTGTGGTTGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTCTCCTCCTTCAGCTCGTaGCTCACCTCCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: AFTRLWLAEACSVRTLPFSSFSS*LTSRTV
Trigger: CACAGTCCTGGAGGTGAGGCACGAGCTGAAGGAGGA...GAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCCAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGTACAAGGACGGGGATaGCGGGAAGTCCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: REGTHQSGTCREFKSSSRVQGRG*REVLGP
Trigger: TGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTAC...TCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TTCAGCTCGTGCCTCACCTCCAGGACTGTGGCCTGCAGCGTCTGCTCAGGGATGCCATACCCTGAGGAATaGCATGGGGACACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FSSCLTSRTVACSVCSGMPYPEE*HGDTWE
Trigger: TTCCCAAGTGTCCCCATGGCATTCCTCAGGGTATGG...CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGAGGTGAGGCACGAGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR GCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCCAGGGCCATCTGTaGCAACCCTGCGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGSQGHL*QPCEPG
Trigger: TCCTGGTTCGCAGGGTTGGCACAGATGGCCCTGGGA...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCACAGCACAAAGCAGCCTaGGGTCAAGTTCATGGTGCG +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYAQHKAA*GQVHGA
Trigger: CGCACCATGAACTTGACCGCAGGCTGCTTTGTGCTG...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCGTGAGGGGGAGTCTTTaGTGCCTCTTGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVVRGSL*CLLLVL
Trigger: CAGTACAAGCAAGAGGCACCAAAGACTCCCCCTCAC...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp TTCAGCTCGTGCCTCACCTCCAGGACTGTGGCCTGCAGCGTCTGCTCAGGGATGCTCAATGTCTGTGGATaGGGCGATGTTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FSSCLTSRTVACSVCSGMLNVCG*GDVPKA
Trigger: GGCTTTGGGAACATCGCCCCATCCACAGACATTGAG...CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGAGGTGAGGCACGAGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CCA 90 bp GGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTCTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GCLEGYGRGRTLTHGDHALTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...AGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGCTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQLTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLEQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: DLKGPSPALTLASPPLGKVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAGGCGCCGGACAGGGTaGTCCGGGGGCAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTRRRTG*SGGKIR
Trigger: CCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCT...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCCACAGTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGG +
Preference number: 4 (lower is better)
Translates to: IGAWMAHTQFCDHHWEPQCCRNL*KRRRTG
Trigger: CCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCA...CTGTGGCTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGCCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTACTCGCCGTGAGCACTaGGCAGGACTAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGTRREH*AGLRRW
Trigger: CCACCTCCTTAGTCCTGCCCAGTGCTCACGGCGAGT...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCCCCTTTGTAAGTATATaGGATGGCAGCGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVPFVSI*DGSAHC
Trigger: GCAATGGGCGCTGCCATCCCATATACTTACAAAGGG...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGCATTCCCGAAGATGGTaGCATAGAGAAGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQHSRRW*HREVLT
Trigger: AGTCAGCACTTCTCTATGCCACCATCTTCGGGAATG...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR TCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCCCCCCAGCCTTTACATaGATCATCCTCAATTGGCTG +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVPPAFT*IILNWL
Trigger: CAGCCAATTGAGGATGATTCATGTAAAGGCTGGGGG...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR TCA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRRSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR TCA 90 bp CAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGCGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: QVALGDATVTRVCLLQCGDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...GCCACACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp CAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGCCAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: QVALGDATVTRVCLLQCGQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...GCCACACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCGAGCCCAGTTTGCGCTaGTTCACGAGTGCATTCCTA +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFEPSLR*FTSAFL
Trigger: TAGGAATGCACTCGTGAATCAGCGCAAACTGGGCTC...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCCACGTTTCACATCGCTaGTCTTCCGGAACACAATCT +
Preference number: 4 (lower is better)
Translates to: WKDTGVAGLSRTVTTLAFHVSHR*SSGTQS
Trigger: AGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...GAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR GCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGCGGCTCCCTCTGGCTaGTACCCTCGCGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQAAPSG*YPRALF
Trigger: GAAGAGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGC...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAGGAGAAGCCCCAGAATGATGAACTGCTCATAAGTAGAAGTGTCCTTGAGGTGGCTCGAAGCGCCCCATaGGCCCGGCGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: KEKPQNDELLISRSVLEVARSAP*ARRGSA
Trigger: TGCGGATCCCCGCCGGGCGCATGGGGCGCTTCGAGC...CACCTCAAGGACACTTCTACTTATGAGCAGTTCATCATTCTGGGGCTTCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CCAAGAACATGTCTGGACTTCAAAGCCTTATACCATCTTTGCCCCTCATACCCAGCTCGAAGCGCCCCATaGGCCCGGCGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: PRTCLDFKALYHLCPSYPARSAP*ARRGSA
Trigger: TGCGGATCCCCGCCGGGCGCATGGGGCGCTTCGAGC...TGGGTATGAGGGGCAAAGATGGTATAAGGCTTTGAAGTCCAGACATGTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCGTCTTTGGTGCCTCTTaGTTGTACTGGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVVFGAS*LYWGRM
Trigger: CATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGAC...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTGTCTTTGGTGCCTCTTaGTTGTACTGGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: AGREGTHQSGTCREFKSSVFGAS*LYWGRM
Trigger: CATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGAC...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR GCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCTGTAGACAGAATTCTTaGTGGGACCACCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVCRQNS*WDHLPT
Trigger: AGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCTACA...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGCCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCATGGTGCCACATATCATaGCCCGACTCCTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYAWCHIS*PDSSKR
Trigger: CCTCTTTGAGGAGTCGGGGCATGATATGTGGCACCA...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCTCTTCTCAATGTCTGTaGATGGGGCGATGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVSSQCL*MGRCSQ
Trigger: TTGGGAACATCGCCCCATCCACAGACATTGAGAAGA...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGCAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 4 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGG +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDCCRNL*KRRRTG
Trigger: CCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCA...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDAFTRL*LAEACS
Trigger: AGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGCCTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: QVALGDATVTRVCLLQCGLAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...GCCACACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGCCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCACTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYALSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
3UTR CAA 72 bp CATATGAGGTTAGGGCTCATGGAGCAGGACTCTCCCTaGAGCTCGCAGGCCTTGTCTTCCCAGGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: HMRLGLMEQDSP*SSQALSSQGHL
Trigger: CAGATGGCCCTGGGAAGACAAGGCCTGCGAGCTCAAGGGAGAGTCCTGCTCCATGAGCCCTAACCTCATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CAA 72 bp AGGCTGTGGTTGGCGGAGGCATGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGGTCATCCAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RLWLAEACSVRT*PFSTSRSSRSR
Trigger: CCGGGACCTGGATGACCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCAGGCCAGTCCACTATCTaGGCATTCCCCAACACAAAA +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYAGQSTI*AFPNTK
Trigger: TTTTGTGTTGGGGAATGCTCAGATAGTGGACTGGCC...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp CCTGTAGCTTTGCGTGGTCTGGCACCCCGGAGGTGGAGGCTGCCTGGAAGGATAAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PVALRGLAPRRWRLPGRIRSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAGACCACGCAAAGCTACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp CCATCACTGGGAGCCACAGCTCCAAGGCCACTTCTCTCCATCACCTTACAGAGATCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PSLGATAPRPLLSITLQRSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...TCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGAGCTGTGGCTCCCAGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp CTTCCCGCAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCTGGCGTTTAAGGCCTTaGTGTCCTCCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: LPASIFEAGPAFALGTIAWRLRP*CPPSAR
Trigger: ACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCA...GGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGCTCGAAGCGCCCCATaGGCCCGGCGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTARSAP*ARRGSA
Trigger: TGCGGATCCCCGCCGGGCGCATGGGGCGCTTCGAGC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTTCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSSPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: EPLDLKGPSPALTLASPPSLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp ATGGGTTGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTATGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: MGCTAENPWILRAPLQLLWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...TAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCCCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCCCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLELLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR GCA 90 bp TTCAGCTCGTGCCTCACCTCCAGGACTGTGGCCTGCAGCGTCTGCTCAGGGATGTCCCCAGATGGCTGCTaGTCTGTTCTGGTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: FSSCLTSRTVACSVCSGMSPDGC*SVLVVL
Trigger: TAAAACTACCAGAACAGAGCAGCAGCCATCTGGGGA...CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGAGGTGAGGCACGAGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCACACCACACCTGCAGCTaGTTTTCTGGCCTTAACCAT +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYAHHTCS*FSGLNH
Trigger: ATGGTTAAGGCCAGAAAAGCAGCTGCAGGTGTGGTG...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGGGCATGCACCACACCTaGAGCTGCTTTTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: DLKGPSPALTLASPPLGKGMHHT*SCFSGL
Trigger: AAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCC...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp CTTGACCTCTGCCAGGATGGGACTCCGATCCTGGGGACTCCTGGCCTCACCCACGAGCTGGAAACTCACTaGTTCATTCTCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LDLCQDGTPILGTPGLTHELETH*FILFPA
Trigger: AGCTGGAAAGAGAATGAAGCAGTGAGTTTCCAGCTC...GTGGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CCA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGGCGGCTCCCTCTaGCTGCTACCCTCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSAGGSL*LLPSRP
Trigger: AGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGCCAGC...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAG +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCVRRAS*RGFLRQ
Trigger: CTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGAC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTGCCTCTTGCTTGTACTaGGGAAGGATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGASCLY*GRMSEP
Trigger: GGGCTCAGACATCCTTCCCCAGTACAAGCAAGAGGC...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp CTTCCCGCAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCGTGAGGGGGAGTCTTTaGTGCCTCTTGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: LPASIFEAGPAFALGTIAVRGSL*CLLLVL
Trigger: CAGTACAAGCAAGAGGCACCAAAGACTCCCCCTCAC...GGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAATATAAGGGACCAAGATaGCTGTATAGAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: QCPEAAITGQPEGRVLLEYKGPR*LYRRSR
Trigger: TCTTGACCTTCTATACAGCCATCTTGGTCCCTTATA...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp CTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTGGAATCACCTCCCCTGCTaGTCCAACAAAGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: LSTVPEEQAMGCTAENPWNHLPC*SNKGGM
Trigger: CATACCACCTTTGTTGGACCAGCAGGGGAGGTGATT...CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCACATTCCCGAAGATaGTGGCATAGAGAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: AGREGTHQSGTCREFKSSSHSRR*WHREVS
Trigger: GCTCACTTCTCTATGCCACCATCTTCGGGAATGTGA...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTAGGCGCCGGACAGGGTaGTCCGGGGGCAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLRRRTG*SGGKIR
Trigger: CCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCT...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGCTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGLAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCCTGCGGTCAAGTTCATaGTGCGAAAAGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFLRSSS*CEKEGR
Trigger: TCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CAA 72 bp GGCAGAGCTGGAGGGAAATGGCAGGGCCTCTTGACATaGACCGTTGGGTGCCAGACAAGAAGCCTGTCATCA +
Preference number: 4 (lower is better)
Translates to: GRAGGKWQGLLT*TVGCQTRSLSS
Trigger: TGATGACAGGCTTCTTGTCTGGCACCCAACGGTCAATGTCAAGAGGCCCTGCCATTTCCCTCCAGCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp ATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCCACAGACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTG +
Preference number: 4 (lower is better)
Translates to: IGAWMAHTQFCDHHWEPQTFPLP*ARPIKL
Trigger: CAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGT...CTGTGGCTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCAGTGAGCCAATCATCATaGTGGCCACTGCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYAVSQSS*WPLQRS
Trigger: AGATCTTTGCAGTGGCCATCATGATGATTGGCTCAC...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCGCTCGAAGCGCCCCATaGGCCCGGCGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKAARSAP*ARRGSA
Trigger: TGCGGATCCCCGCCGGGCGCATGGGGCGCTTCGAGC...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKTLGAS*CRTPLL
Trigger: CAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGT...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR GCA 90 bp GGCACAGGAGCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GTGAFRQHVPSSKIVQRRTLGAS*CRTPLL
Trigger: CAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGT...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGCTCCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640528.1
CDS-3UTR GCA 90 bp ATGGGTTGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTAACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MGCTAENPWILRAPLQLLTFSPF*TLGASC
Trigger: GCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT...TAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGGGGGAGTCTTTGGTaGCTCTTGCTTGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDRGSLW*LLLVLG
Trigger: CCCCAGTACAAGCAAGAGGCACCAAAGACTCCCCCT...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR GCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACGCCCCCTCTCTCAGCTaGCAGCCTGGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHAPSLS*QPGLFL
Trigger: CAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGC...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAGCCCCCTCTCTCAGCTaGCAGCCTGGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: HQSGTCREFKSSSRGSRIAPSLS*QPGLFL
Trigger: CAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGC...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGGCCCCCTCTCTCAGCTaGCAGCCTGGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKAPSLS*QPGLFL
Trigger: CAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGC...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR GCA 90 bp AGGAGCTGGCTTCCAGTCATGAGCCCAGTTTGCGCTGATTCACGAGTGCATTCCTGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: RSWLPVMSPVCADSRVHSWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...GGAATGCACTCGTGAATCAGCGCAAACTGGGCTCATGACTGGAAGCCAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAACCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCSGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQSGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTCCTCCTTCAGCTCGTaGCTCACCTCCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHSSFSS*LTSRTV
Trigger: CACAGTCCTGGAGGTGAGGCACGAGCTGAAGGAGGA...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCCCTATAATGACCCCGTaGGGTGAACAAAATACAAAG +
Preference number: 4 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVPIMTP*GEQNTK
Trigger: CTTTGTATTTTGTTCACCGCACGGGGTCATTATAGG...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAG +
Preference number: 4 (lower is better)
Translates to: ATDIQWCSWQHPQLTTKIVRRAS*RGFLRQ
Trigger: CTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGAC...TATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAG +
Preference number: 4 (lower is better)
Translates to: IINGRACTFLLTFPSHRYVRRAS*RGFLRQ
Trigger: CTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGAC...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTGTGAGGGGGAGTCTTTaGTGCCTCTTGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGVRGSL*CLLLVL
Trigger: CAGTACAAGCAAGAGGCACCAAAGACTCCCCCTCAC...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp CTGGCCTCACCCACGTTGTCCAGGCGCAAGTCGCTCTTGGTGATGCCACTGTCATCACATTCCCGAAGATaGTGGCATAGAGAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LASPTLSRRKSLLVMPLSSHSRR*WHREVS
Trigger: GCTCACTTCTCTATGCCACCATCTTCGGGAATGTGA...TGACAGTGGCATCACCAAGAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CCA 90 bp CCATCACTGGGAGCCACAGCTCCAAGGCCACTTCTCTCCATCACCTTACAGAGAACATTGGCACAGGACTaGGCAAGGGTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSLGATAPRPLLSITLQRTLAQD*ARVASF
Trigger: GAAGGAAGCCACCCTTGCCCAGTCCTGTGCCAATGT...TCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGAGCTGTGGCTCCCAGTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGCCRNL*KRRRTG
Trigger: CCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCA...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSHRYTVVFLAASSADHKACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...TTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCCACCTTACAGAGAGCTaGAAACTCACTGCTTCATTC +
Preference number: 4 (lower is better)
Translates to: QASLKRAQLLRLAQSPPPHLTES*KLTASF
Trigger: GAATGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTG...GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACAAAAAGTGTCTCCAGTaGCAGGTTCTTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENKKCLQ*QVLLRL
Trigger: CAGCCTCAGAAGAACCTGCCACTGGAGACACTTTTT...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTAGAGCTGGAGGGAAATaGCAGGGCCTCTTGACATTG +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGRAGGK*QGLLTL
Trigger: CAATGTCAAGAGGCCCTGCCATTTCCCTCCAGCTCT...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ATGGGTTGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTAGGATCGAAGAGGTTGTaGGTAAAACAGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: MGCTAENPWILRAPLQLLGSKRL*VKQSPG
Trigger: CCCTGGGGACTGTTTTACCCACAACCTCTTCGATCC...TAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACAGGGAATATCATCAATaGAAGGGCCTGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENREYHQ*KGLHVP
Trigger: AGGAACGTGCAGGCCCTTCCATTGATGATATTCCCT...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CAA 72 bp ACCTTGTTCCAGTCCTCACTCTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCG +
Preference number: 4 (lower is better)
Translates to: TLFQSSLFPQAS*KRAQLLRLAQS
Trigger: CGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAGAGTGAGGACTGGAACAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CAA 72 bp AGTCTGTCTTCTTCAGTGTGGCCTCGCCTGACGCTTTaGTCCTCTCGGGAAGTGTCTCCATCGACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLSSSVWPRLTL*SSREVSPSTQP
Trigger: AGGCTGAGTCGATGGAGACACTTCCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGCCCCCAGCCTTTACATaGATCATCCTCAATTGGCTG +
Preference number: 4 (lower is better)
Translates to: DLKGPSPALTLASPPLGKPPAFT*IILNWL
Trigger: CAGCCAATTGAGGATGATTCATGTAAAGGCTGGGGG...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRRWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR TCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTG +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDTFPLP*ARPIKL
Trigger: CAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGT...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR TCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACAGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACACAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTCAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp GGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTCGAGCTAGTTATAAATaGCAACTACAGGAAAACATG +
Preference number: 4 (lower is better)
Translates to: GCLEGYGRGRTLTHGDHARASYK*QLQENM
Trigger: CATGTTTTCCTGTAGTTGTCATTTATAACTAGCTCG...AGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR TCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCGCAACTCTGGGCTCATaGCCCTTCCTGCCGATGCTC +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCATLGS*PFLPML
Trigger: GAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGC...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCACCATTCCCTCCAAGTTaGCTTTTCAGAGCTGAACTT +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYAPFPPS*LFRAEL
Trigger: AAGTTCAGCTCTGAAAAGTCAACTTGGAGGGAATGG...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTGTTTGCAGTCAGTGCTaGGAGGATCATGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGVCSQC*EDHEVS
Trigger: GGAGACTTCATGATCCTCTCAGCACTGACTGCAAAC...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKLGASC*RTPLLL
Trigger: AAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAG...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR GCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQLGASC*RTPLLL
Trigger: AAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAG...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACAGGGGGAGTCTTTGGTaGCTCTTGCTTGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHRGSLW*LLLVLG
Trigger: CCCCAGTACAAGCAAGAGGCACCAAAGACTCCCCCT...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp AGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: REGTHQSGTCREFKSSSRRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...TCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGGCAGGCCATCCAGTGTaGAGCCAGCCCAAACACACA +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGAGHPV*SQPKHT
Trigger: TGTGTGTTTGGGCTGGCTGCACACTGGATGGCCTGC...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAASPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp CTGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACGCCCCCTCTCTCAGCTaGCAGCCTGGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LRSSSWCEKEGRKVWLIYAPSLS*QPGLFL
Trigger: CAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGC...GTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTTGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp CAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGCCGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: QVALGDATVTRVCLLQCGRMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...GCCACACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACTCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GNIINGRACTFLLTFPSHSRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCTCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCSRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCAATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 4 (lower is better)
Translates to: SKATSLHHLTESWKLTASMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 4 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAGAGCAGGCTATGGGTTaGACCGCAGAGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: HQSGTCREFKSSSRGSRIEQAMG*TAENPW
Trigger: CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTC...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTAGAGCAGGCTATGGGTTaGACCGCAGAGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLEQAMG*TAENPW
Trigger: CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTC...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCAGAGCTGGAAACTCACTaGTTCATTCTCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYAELETH*FILFPA
Trigger: AGCTGGAAAGAGAATGAAGCAGTGAGTTTCCAGCTC...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACACATCTGTGCCAACCCTaGGAACCAGGAGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTHLCQP*EPGEVS
Trigger: GCTGACCTCTCCTGGTTCGCAGGGTTGGCACAGATG...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAG +
Preference number: 4 (lower is better)
Translates to: LIEQLMDPSDDSEVTDKGVRRAS*RGFLRQ
Trigger: CTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGAC...CCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAG +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTVRRAS*RGFLRQ
Trigger: CTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGAC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGGCCTTTTTGCACGCTTaGAGCCAGCTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGAFLHA*SQLLQD
Trigger: GTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGC...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCAAAACCAATCTTCCCTaGATCACCCATAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVKTNLP*ITHKGT
Trigger: AGTGCCTTTATGGGTGATCCAGGGAAGATTGGTTTT...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR CCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGTCACATTCCCGAAGATaGTGGCATAGAGAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWESHSRR*WHREVS
Trigger: GCTCACTTCTCTATGCCACCATCTTCGGGAATGTGA...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 4 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TTCTCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: FSILVILAFKALMSSFSSGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGG +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCCCRNL*KRRRTG
Trigger: CCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCA...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TCCTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SSSSSCTSESGSGRRNGRAFTRL*LAEACS
Trigger: AGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC...TCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISLAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCACCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATCCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAADPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACAATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCAATAGACCTCTCAGCTaGCTCCAAAAATGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QASLKRAQLLRLAQSPPPNRPLS*LQKCLS
Trigger: AGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT...GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTAATGCCGGGAAGTCCTTaGCCCACTGCAGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLMPGSP*PTAVHG
Trigger: CCCATGGACTGCAGTGGGCCAAGGACTTCCCGGCAT...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACTTAATAAAGCAACTCTaGGCTCATGACCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENLIKQL*AHDPSC
Trigger: GCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAA...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp ATGGGTTGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTATTGCGTGTCAGTATTTaGGGTCCTGACACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: MGCTAENPWILRAPLQLLLRVSI*GPDTSL
Trigger: GAGAGAGGTGTCAGGACCCCAAATACTGACACGCAA...TAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGGGTTTCTCAACCAAATaGTCGTCTCTGTTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWEGFSTK*SSLFPS
Trigger: GGACGGAAACAGAGACGACCATTTGGTTGAGAAACC...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATGTCCCCACAAGGGCCTaGACAAAGAGCTTGACAGTT +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDVPTRA*TKSLTV
Trigger: AACTGTCAAGCTCTTTGTCCAGGCCCTTGTGGGGAC...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
3UTR CAA 72 bp TCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTaGTTCCAGTCCTCACTCTTCCCGCAAGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: SGSVSIDSALDT*FQSSLFPQASL
Trigger: CAAAGATGCTTGCGGGAAGAGTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
3UTR CAA 72 bp TTTGTCCTCTCGGGAAGTGTCTCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCCTCACTCTTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: FVLSGSVSIDSA*DTLFQSSLFPQ
Trigger: TTGCGGGAAGAGTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGAGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTAAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSIDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACTCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGTCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCAAGCATAGTATATACATaGGAGGTTCTCGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: AVKCPRASWHRGLDGPYASIVYT*EVLGTF
Trigger: GAAAGTGCCGAGAACCTCTCATGTATATACTATGCT...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACAGCAACTCTGGGCTCATaGCCCTTCCTGCCGATGCTC +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTATLGS*PFLPML
Trigger: GAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGC...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGCAACTCTGGGCTCATaGCCCTTCCTGCCGATGCTC +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLATLGS*PFLPML
Trigger: GAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGC...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTCCTGTAAGCCTGATGTaGGAAGCTACATATGAGGTT +
Preference number: 4 (lower is better)
Translates to: EPLDLKGPSPALTLASPPPVSLM*EATYEV
Trigger: AACCTCATATGTAGCTTCTCACATCAGGCTTACAGG...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCAACCAGCAGCCAAGTaGCAGGGACAGGACCTACCC +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCQPAAK*QGQDLP
Trigger: GGGTAGGTCCTGTCCCTGTCACTTGGCTGCTGGTTG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp CCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAGTGCTGAGAGGATCATaGAGTCTCCCCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PSHRYTVVFLAASSADHKVLRGS*SLPQVE
Trigger: CTCCACCTGGGGGAGACTTCATGATCCTCTCAGCAC...TTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGCCTGCTGCTTGTCAGTaGTCTTGTCAGCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQPAACQ*SCQPSK
Trigger: TTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGG...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTAGHPC*LSVLLS
Trigger: TGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGC...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGAGHPC*LSVLLS
Trigger: TGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGC...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLLGASC*RTPLLL
Trigger: AAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAG...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISLGASC*RTPLLL
Trigger: AAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAG...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CCAAGAACATGTCTGGACTTCAAAGCCTTATACCATCTTTGCCCCTCATACCCAACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRTCLDFKALYHLCPSYPTLGAS*CRTPLL
Trigger: CAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGT...TGGGTATGAGGGGCAAAGATGGTATAAGGCTTTGAAGTCCAGACATGTTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCTCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCSARRE*LWTFSP
Trigger: AGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGA...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAGCAGGCCATCCAGTGTaGAGCCAGCCCAAACACACA +
Preference number: 4 (lower is better)
Translates to: HQSGTCREFKSSSRGSRIAGHPV*SQPKHT
Trigger: TGTGTGTTTGGGCTGGCTGCACACTGGATGGCCTGC...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHSLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCGCCCCCTCTCTCAGCTaGCAGCCTGGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSIAPSLS*QPGLFL
Trigger: CAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGC...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTATCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVSRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGCAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTCCAGCTCTTACCCTTaGCTCACCTCCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHSSSYP*LTSFGE
Trigger: TTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGA...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACGACAGCAGGAAACTaGCCTCGGGGCCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: LIEQLMDPSDDSEVTDKGTTAGN*PRGPHA
Trigger: TGCGTGCGGGCCCCGAGGCCAGTTTCCTGCTGTCGT...CCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp CAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGCGTGAGGGGGAGTCTTTaGTGCCTCTTGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: QVALGDATVTRVCLLQCGVRGSL*CLLLVL
Trigger: CAGTACAAGCAAGAGGCACCAAAGACTCCCCCTCAC...GCCACACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp AGGAGCTGGCTTCCAGTCATGAGCCCAGTTTGCGCTGATTCACGAGTGCATTCCTCTCCCCTCCAGTGGTaGTGGAATCTGATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: RSWLPVMSPVCADSRVHSSPLQW*WNLISK
Trigger: TTTGCTGATCAGATTCCACCACCACTGGAGGGGAGA...GGAATGCACTCGTGAATCAGCGCAAACTGGGCTCATGACTGGAAGCCAGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271751.10
CDS-3UTR CCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCTTCTCAATGTCTGTaGATGGGGCGATGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGSSQCL*MGRCSQ
Trigger: TTGGGAACATCGCCCCATCCACAGACATTGAGAAGA...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGATCACATTCCCGAAGATaGTGGCATAGAGAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: REGTHQSGTCREFKSSSRSHSRR*WHREVS
Trigger: GCTCACTTCTCTATGCCACCATCTTCGGGAATGTGA...TCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGACTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: REGTHQSGTCREFKSSSRLTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...TCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATAGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSIAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTAGGACTGGGCAAGGGTaGCTTCCTTCCAGAACACAT +
Preference number: 4 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSRTGQG*LPSRTH
Trigger: ATGTGTTCTGGAAGGAAGCCACCCTTGCCCAGTCCT...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLCCRNL*KRRRTG
Trigger: CCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCA...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCAFTRL*LAEACS
Trigger: AGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISDPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp CTGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LRSSSWCEKEGRKVWLIYDPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...GTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTAGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLDPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCDPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATATGTCCCCGAGCATCGTaGCATAGGGGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSICPRAS*HRGLDG
Trigger: GCCATCCAAGCCCCTATGCCACGATGCTCGGGGACA...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACCAGAGGTACCAGGAATaGGGTCACCGTCTAACACAG +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHQRYQE*GHRLTQ
Trigger: CTGTGTTAGACGGTGACCCCATTCCTGGTACCTCTG...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTAACTCGCCGTGAGCACTaGGCAGGACTAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLTRREH*AGLRRW
Trigger: CCACCTCCTTAGTCCTGCCCAGTGCTCACGGCGAGT...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: IINGRACTFLLTFPSHRYRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp CAACGTGTATCTCCACCAGGGCTCCTAAAATTTCCCAGAGTATGCATGGGAGACGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: QRVSPPGLLKFPRVCMGDAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...GTCTCCCATGCATACTCTGGGAAATTTTAGGAGCCCTGGTGGAGATACACGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACCACGTTTCACATCGCTaGTCTTCCGGAACACAATCC +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHHVSHR*SSGTQS
Trigger: GGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGCACGTTTCACATCGCTaGTCTTCCGGAACACAATCC +
Preference number: 4 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQHVSHR*SSGTQS
Trigger: GGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTTCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACACAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp CTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGCAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LIEQLMDPSDDSEVTDKGQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...CCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTGGCGTTTAAGGCCTTaGTGTCCTCCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGWRLRP*CPPSAR
Trigger: ACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCA...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACTGGAAGTTAATATCCTaGGTATCTCAGAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENWKLIS*VSQRAV
Trigger: AACAGCTCTCTGAGATACTCAGGATATTAACTTCCA...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAAAAATGTCTCTCTCTaGTTCTGGGGACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDKNVSL*FWGLWP
Trigger: AGGCCACAGTCCCCAGAATCAGAGAGAGACATTTTT...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTCTCTTTCCAGCTCCTaGAGAGAGTACAATCATGAT +
Preference number: 4 (lower is better)
Translates to: EPLDLKGPSPALTLASPPSLSSS*REYNHD
Trigger: ATCATGATTGTACTCTCTTCAGGAGCTGGAAAGAGA...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGCCATTCCCTCCAAGTTaGCTTTTCAGAGCTGAACTT +
Preference number: 4 (lower is better)
Translates to: DLKGPSPALTLASPPLGKPFPPS*LFRAEL
Trigger: AAGTTCAGCTCTGAAAAGTCAACTTGGAGGGAATGG...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGCAGGTCACTGGTATCTaGGGCACATGGTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVQVTGI*GTWSWL
Trigger: GAGCCAGGACCATGTGCCTCAGATACCAGTGACCTG...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GCTGAAGGCCTCACAGCTTTATTCAAAGTCACAGATAGTTGTGACTCGGCCTTACAACCAGCAGCCAAGTaGCAGGGACAGGACCTACCC +
Preference number: 4 (lower is better)
Translates to: AEGLTALFKVTDSCDSALQPAAK*QGQDLP
Trigger: GGGTAGGTCCTGTCCCTGTCACTTGGCTGCTGGTTG...TAAGGCCGAGTCACAACTATCTGTGACTTTGAATAAAGCTGTGAGGCCTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGCCTGGGCAACAGAGTaGGACCCCTTTAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQAWATE*DPFRQH
Trigger: ATGCTGTCTAAAGGGGTCTCACTCTGTTGCCCAGGC...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGCTCGAAGCGCCCCATaGGCCCGGCGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSARSAP*ARRGSA
Trigger: TGCGGATCCCCGCCGGGCGCATGGGGCGCTTCGAGC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQAGHPC*LSVLLS
Trigger: TGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGC...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTAGCTGCAGGACACCCCTaGTGCTTGTCAGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLAAGHP*CLSVLL
Trigger: CAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGC...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTATCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVSARRE*LWTFSP
Trigger: AGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGA...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTATCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLSARRE*LWTFSP
Trigger: AGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGA...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGCAGGCCATCCAGTGTaGAGCCAGCCCAAACACACA +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLAGHPV*SQPKHT
Trigger: TGTGTGTTTGGGCTGGCTGCACACTGGATGGCCTGC...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATTGTAGACAGAATTCTTaGTGGGACCACCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDCRQNS*WDHLPT
Trigger: AGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCTACA...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCCCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKAPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTTTTAAATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGCCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: FLNRPLSWLQKCLSLILGPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...CCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTSGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTCTCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: FSILVILAFKALMSSFSSSGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHRMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCCGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAARMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCCGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCRMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTTCCTCCTTCAGCTCGTaGCTCACCTCCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISSSFSS*LTSRTV
Trigger: CACAGTCCTGGAGGTGAGGCACGAGCTGAAGGAGGA...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGTGCATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 4 (lower is better)
Translates to: SILVILAFKALMSSFSSCMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...GCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCCAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATATGTCTATGGGAGGCATaGACCACACCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HQSGTCREFKSSSRGSRICLWEA*TTPAAA
Trigger: AGCAGCTGCAGGTGTGGTGCATGCCTCCCATAGACA...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACGGCCAGCTCCACTGTaGCTGGAAGAGACTTCACTC +
Preference number: 4 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSIRPAPL*LEETSL
Trigger: GAGTGAAGTCTCTTCCAGGCACAGTGGAGCTGGCCG...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TCCACTGTGCCTGGAAGAGACTTCACTCCTTTCCTTTCTCAGATGCCATTGAGAAGGAGAGGTCAGCCCTaGCTTGCACAGACAACCGAG +
Preference number: 4 (lower is better)
Translates to: STVPGRDFTPFLSQMPLRRRGQP*LAQTTE
Trigger: CTCGGTTGTCTGTGCAAGGCAGGGCTGACCTCTCCT...TCTCAATGGCATCTGAGAAAGGAAAGGAGTGAAGTCTCTTCCAGGCACAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp CAACAGATGGGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTGGTTGGCAAGGAGAGGTCAGCCCTaGCTTGCACAGACAACCGAG +
Preference number: 4 (lower is better)
Translates to: QQMGFQIFYGLLPKDWLARRGQP*LAQTTE
Trigger: CTCGGTTGTCTGTGCAAGGCAGGGCTGACCTCTCCT...TGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCCCATCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTGCGCTGATTCACGAGTaGATTCCTAAAGCTACATTC +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGALIHE*IPKATF
Trigger: GAATGTAGCTTTAGGAATGCACTCGTGAATCAGCGC...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAATCAATGGAAGGGCCTaGACGTTCCTCTTAACATTC +
Preference number: 4 (lower is better)
Translates to: REGTHQSGTCREFKSSSRINGRA*TFLLTF
Trigger: GAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGAT...TCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGGCTGGCGGCTCCCTCTaGCTGCTACCCTCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLAGGSL*LLPSRP
Trigger: AGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGCCAGC...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367007.5
ENST00000640710.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTACGACAGCAGGAAACTaGCCTCGGGGCCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASTTAGN*PRGPHA
Trigger: TGCGTGCGGGCCCCGAGGCCAGTTTCCTGCTGTCGT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCACGACAGCAGGAAACTaGCCTCGGGGCCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKATTAGN*PRGPHA
Trigger: TGCGTGCGGGCCCCGAGGCCAGTTTCCTGCTGTCGT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACAGCCTTTTTGCACGCTTaGAGCCAGCTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTAFLHA*SQLLQD
Trigger: GTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGC...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAGCCTTTTTGCACGCTTaGAGCCAGCTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVAFLHA*SQLLQD
Trigger: GTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGC...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGAGGCGGGAGTGCTTGTaGACATTCTCGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGRRECL*TFSPFC
Trigger: GCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCT...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACCTCTCTCCCCTCCAGTaGTGGTGGAATCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GNIINGRACTFLLTFPSHLSPLQ*WWNLIS
Trigger: GCTGATCAGATTCCACCACCACTGGAGGGGAGAGAG...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271751.10
CDS-3UTR CCA 90 bp AGGAGCTGGCTTCCAGTCATGAGCCCAGTTTGCGCTGATTCACGAGTGCATTCCATGTCCATCGCTAGTTaGTACAGCCAGCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: RSWLPVMSPVCADSRVHSMSIAS*YSQLLL
Trigger: CAACAACAGCTGGCTGTACCAACTAGCGATGGACAT...GGAATGCACTCGTGAATCAGCGCAAACTGGGCTCATGACTGGAAGCCAGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGCAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 4 (lower is better)
Translates to: DLKGPSPALTLASPPLGKQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGTGCGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: SILVILAFKALMSSFSSCVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...GCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGG +
Preference number: 4 (lower is better)
Translates to: IINGRACTFLLTFPSHRYCCRNL*KRRRTG
Trigger: CCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCA...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACACTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTLAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCCCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKAPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTCCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACACCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AAAATTTCCCAGAGTATGCATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAAATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: KISQSMHGRHSGQCNKGKMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...TTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GCCTTCACGAGGCTGTGGTTGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTCAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AFTRLWLAEACSVRTLPFKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...GAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATGCCCACTGCAGTCCATaGGGGGTCTTGGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: IINGRACTFLLTFPSHRYAHCSP*GVLAKE
Trigger: CTCCTTTGCCAAGACCCCCCATGGACTGCAGTGGGC...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGCAGAGGAGCAGGCTATaGGTTGCACCGCAGAGAACC +
Preference number: 4 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVQRSRL*VAPQRT
Trigger: GGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTG...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGCAGAGGAGCAGGCTATaGGTTGCACCGCAGAGAACC +
Preference number: 4 (lower is better)
Translates to: SGTCREFKSSSRGSRISLQRSRL*VAPQRT
Trigger: GGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTG...CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGGAAGGCTCAGGTCACTaGTATCTGAGGCACATGGTC +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGEGSGH*YLRHMV
Trigger: GACCATGTGCCTCAGATACCAGTGACCTGAGCCTTC...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGCCAACAGCAGCACACTaGATCGAAGAGGTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGPTAAH*IEEVVG
Trigger: ACCCACAACCTCTTCGATCCAGTGTGCTGCTGTTGG...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACATACAGTGGTGTTCTTaGCAGCATCCTCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHIQWCS*QHPQLT
Trigger: GGTCAGCTGAGGATGCTGCCAAGAACACCACTGTAT...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHRSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWERWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATAGCAAGTCGCTCTTGGTaGTGCCACTGTCACACGAGT +
Preference number: 4 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSIASRSW*CHCHTS
Trigger: ACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGC...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGCAAGTCGCTCTTGGTaGTGCCACTGTCACACGAGT +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCASRSW*CHCHTS
Trigger: ACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTGCAAGTCGCTCTTGGTaGTGCCACTGTCACACGAGT +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISASRSW*CHCHTS
Trigger: ACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGC...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATAGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSIGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCATGGCGTTTAAGGCCTTaGTGTCCTCCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SKATSLHHLTESWKLTASWRLRP*CPPSAR
Trigger: ACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCA...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGAAAAATGTCTCTCTCTaGTTCTGGGGACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQKNVSL*FWGLWP
Trigger: AGGCCACAGTCCCCAGAATCAGAGAGAGACATTTTT...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGAGACAGAAAGTTTCTaGGCTCTACCCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQETESF*ALPSCP
Trigger: GGGACAGGAGGGTAGAGCTCAGAAACTTTCTGTCTC...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTTTTCTCAGATGCCATTaGGAGAAGCCCAAGCACATG +
Preference number: 4 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSFLRCH*EKPKHM
Trigger: CATGTGCTTGGGCTTCTCTCAATGGCATCTGAGAAA...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR TCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTGGGTTTTGGGGGTaGTTAGAGGCCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSAGFWG*LEACPA
Trigger: GGCAGGGCAGGCCTCTAATCACCCCCAAAACCCAGC...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTCATACCCAGAGGTCTaGGAAATTTCACGGACATCC +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHSYPEV*EISRTS
Trigger: GGATGTCCGTGAAATTTCTCAGACCTCTGGGTATGA...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp CAACAGATGGGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTGGTTGGCATTCCAGGAAAGGGGCTaGTGTTTGGCCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: QQMGFQIFYGLLPKDWLAFQERG*CLANSS
Trigger: GCTGCTGTTGGCCAAACATCAGCCCCTTTCCTGGAA...TGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCCCATCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACAGTGCTGAGAGGATCATaGAGTCTCCCCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CGQVHGAKRKGERFGSFTVLRGS*SLPQVE
Trigger: CTCCACCTGGGGGAGACTTCATGATCCTCTCAGCAC...TGTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGGTTTGCAGTCAGTGCTaGGAGGATCATGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGVCSQC*EDHEVS
Trigger: GGAGACTTCATGATCCTCTCAGCACTGACTGCAAAC...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGTGGACAGTCTCCAACTaGTGCACAAATACAGCATCG +
Preference number: 4 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQWTVSN*CTNTAS
Trigger: CGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCA...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCCCTGCTGCTTGTCAGTaGTCTTGTCAGCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCPAACQ*SCQPSK
Trigger: TTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGG...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGCTGCAGGACACCCCTaGTGCTTGTCAGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ATDIQWCSWQHPQLTTKIAAGHP*CLSVLL
Trigger: CAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGC...TATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKATLGAS*CRTPLL
Trigger: CAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASTLGAS*CRTPLL
Trigger: CAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQTFSPF*TLGASC
Trigger: GCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GNIINGRACTFLLTFPSHTFSPF*TLGASC
Trigger: GCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GCTGAAGGCCTCACAGCTTTATTCAAAGTCACAGATAGTTGTGACTCGGCCTTAGCAGGCCATCCAGTGTaGAGCCAGCCCAAACACACA +
Preference number: 4 (lower is better)
Translates to: AEGLTALFKVTDSCDSALAGHPV*SQPKHT
Trigger: TGTGTGTTTGGGCTGGCTGCACACTGGATGGCCTGC...TAAGGCCGAGTCACAACTATCTGTGACTTTGAATAAAGCTGTGAGGCCTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGCATCATGATGGCCACTaGAAAGATCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: DLKGPSPALTLASPPLGKHHDGH*KDLLNV
Trigger: GACATTGAGAAGATCTTTGCAGTGGCCATCATGATG...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGTCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR GCA 90 bp GGCACAGGAGCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GTGAFRQHVPSSKIVQRRSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGCTCCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640528.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGAATTCCAGCACTTTCTaGAGGGCATCCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGNSSTF*RASRLI
Trigger: GATCAAGCGGGATGCCCTGCAGAAAGTGCTGGAATT...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGCACAGGAGCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GTGAFRQHVPSSKIVQRRSLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGCTCCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640528.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGCCCCCTCTCTCAGCTaGCAGCCTGGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASAPSLS*QPGLFL
Trigger: CAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCGCCCCCTCTCTCAGCTaGCAGCCTGGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKAAPSLS*QPGLFL
Trigger: CAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGC...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATATGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSIWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCACCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: YKICELLIEQLMDPSDDSPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKASGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATATCCTCCTTCAGCTCGTaGCTCACCTCCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: ATDIQWCSWQHPQLTTKISSFSS*LTSRTV
Trigger: CACAGTCCTGGAGGTGAGGCACGAGCTGAAGGAGGA...TATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGCTGTCCCTCAAGCTCTaGTTGTCCCGAGCTAGTTAT +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGLSLKL*LSRASY
Trigger: ATAACTAGCTCGGGACAAGCAGAGCTTGAGGGACAG...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGGGCATGCACCACACCTaGAGCTGCTTTTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SGTCREFKSSSRGSRISLGMHHT*SCFSGL
Trigger: AAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCC...CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAGTCATGAGCCCAGTTTaGGCTGATTCACGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTVMSPV*ADSRVH
Trigger: ATGCACTCGTGAATCAGCGCAAACTGGGCTCATGAC...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp CCATCACTGGGAGCCACAGCTCCAAGGCCACTTCTCTCCATCACCTTACAGAGAATCAATGGAAGGGCCTaGACGTTCCTCTTAACATTC +
Preference number: 4 (lower is better)
Translates to: PSLGATAPRPLLSITLQRINGRA*TFLLTF
Trigger: GAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGAT...TCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGAGCTGTGGCTCCCAGTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTACGACAGCAGGAAACTaGCCTCGGGGCCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLTTAGN*PRGPHA
Trigger: TGCGTGCGGGCCCCGAGGCCAGTTTCCTGCTGTCGT...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCCTGTTCGTTTCGAATTaGAGCAATTTTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVLFVSN*SNFHKE
Trigger: TTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAG...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CCA 90 bp CGTGGCATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGTATAAGGGACCAAGATaGCTGTATAGAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: RGIGAWMAHTQFCDHHWEYKGPR*LYRRSR
Trigger: TCTTGACCTTCTATACAGCCATCTTGGTCCCTTATA...CTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGAATCACCTCCCCTGCTaGTCCAACAAAGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGNHLPC*SNKGGM
Trigger: CATACCACCTTTGTTGGACCAGCAGGGGAGGTGATT...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATTGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDCCGLS*CPRQRS
Trigger: AGATCTTTGACGAGGACACCAAGACAATCCGCAACA...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCCTCAATGTCTGTGGATaGGGCGATGTTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPLNVCG*GDVPKA
Trigger: GGCTTTGGGAACATCGCCCCATCCACAGACATTGAG...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGCTCAATGTCTGTGGATaGGGCGATGTTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQLNVCG*GDVPKA
Trigger: GGCTTTGGGAACATCGCCCCATCCACAGACATTGAG...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCAGGACTGGGCAAGGGTaGCTTCCTTCCAGAACACAT +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFRTGQG*LPSRTH
Trigger: ATGTGTTCTGGAAGGAAGCCACCCTTGCCCAGTCCT...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCAGGACTGGGCAAGGGTaGCTTCCTTCCAGAACACAT +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAARTGQG*LPSRTH
Trigger: ATGTGTTCTGGAAGGAAGCCACCCTTGCCCAGTCCT...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACATGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGG +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTCCRNL*KRRRTG
Trigger: CCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCA...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKAGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTAGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTCCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp CCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAACCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PSHRYTVVFLAASSADHKPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...TTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGCTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQLSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATACTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: HQSGTCREFKSSSRGSRILSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCCTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAALSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCGCTGTTTCTCAATATTaGTCATTTTGGCGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFAVSQY*SFWRLR
Trigger: CCTTAAACGCCAAAATGACCAATATTGAGAAACAGC...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCAGCATGTTTAAGAAATaGCAGACTAGAATGTTAGGG +
Preference number: 4 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFSMFKK*QTRMLG
Trigger: CCCTAACATTCTAGTCTGCCATTTCTTAAACATGCT...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTAGAAGGCTCAGGTCACTaGTATCTGAGGCACATGGTC +
Preference number: 4 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLEGSGH*YLRHMV
Trigger: GACCATGTGCCTCAGATACCAGTGACCTGAGCCTTC...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCACCAACAGCAGCACACTaGATCGAAGAGGTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SKATSLHHLTESWKLTASPTAAH*IEEVVG
Trigger: ACCCACAACCTCTTCGATCCAGTGTGCTGCTGTTGG...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAAAGGGGCTGATGTTTaGCCAACAGCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: GNIINGRACTFLLTFPSHKGADV*PTAAHW
Trigger: CCAGTGTGCTGCTGTTGGCCAAACATCAGCCCCTTT...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTGAGAGGAAGGGGCATTaGCAGCTCTATCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISERKGH*QLYHSW
Trigger: CCAGCTGTGATAGAGCTGCCAATGCCCCTTCCTCTC...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CCAAGAACATGTCTGGACTTCAAAGCCTTATACCATCTTTGCCCCTCATACCCAGGGCACCCACCAGTCTaGCACCTGCAGGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: PRTCLDFKALYHLCPSYPGHPPV*HLQGIQ
Trigger: TTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCC...TGGGTATGAGGGGCAAAGATGGTATAAGGCTTTGAAGTCCAGACATGTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCAGGCCAGTCCACTATCTaGGCATTCCCCAACACAAAA +
Preference number: 4 (lower is better)
Translates to: SKATSLHHLTESWKLTASGQSTI*AFPNTK
Trigger: TTTTGTGTTGGGGAATGCTCAGATAGTGGACTGGCC...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACCCCCCAGCCTTTACATaGATCATCCTCAATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GNIINGRACTFLLTFPSHPPAFT*IILNWL
Trigger: CAGCCAATTGAGGATGATTCATGTAAAGGCTGGGGG...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGCCCCCAGCCTTTACATaGATCATCCTCAATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKPPAFT*IILNWL
Trigger: CAGCCAATTGAGGATGATTCATGTAAAGGCTGGGGG...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR TCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGRSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGCTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRLLHGR*GPLGHS
Trigger: ACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAG...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTCTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASLLHGR*GPLGHS
Trigger: ACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAG...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp GCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGCAAGTCGCTCTTGGTaGTGCCACTGTCACACGAGT +
Preference number: 4 (lower is better)
Translates to: ATDIQWCSWQHPQLTTKIASRSW*CHCHTS
Trigger: ACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGC...TATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTATGGCGTTTAAGGCCTTaGTGTCCTCCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVWRLRP*CPPSAR
Trigger: ACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCA...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTAGAGCCCAGTTTGCGCTaGTTCACGAGTGCATTCCTA +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLEPSLR*FTSAFL
Trigger: TAGGAATGCACTCGTGAATCAGCGCAAACTGGGCTC...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TCCACTGTGCCTGGAAGAGACTTCACTCCTTTCCTTTCTCAGATGCCATTGAGAAGCCCTCCCCACTTTTaGAAGAGGAGGATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: STVPGRDFTPFLSQMPLRSPPHF*KRRIPG
Trigger: TCCTGGAATCCTCCTCTTTCAAAAGTGGGGAGGGCT...TCTCAATGGCATCTGAGAAAGGAAAGGAGTGAAGTCTCTTCCAGGCACAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACATGGACAGTCTCCAACTaGTGCACAAATACAGCATCG +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTWTVSN*CTNTAS
Trigger: CGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCA...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGTCCTTGAGGTGTCGGTaGAATGTCGGATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: SGTCREFKSSSRGSRISLSLRCR*NVGCGQ
Trigger: CTGTCCACATCCGACATTTCACCGACACCTCAAGGA...CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACATCCTTGAGGTGTCGGTaGAATGTCGGATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTSLRCR*NVGCGQ
Trigger: CTGTCCACATCCGACATTTCACCGACACCTCAAGGA...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp ATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCCACAGCTCATTTGGACAAAGTaGCAGATGCAAAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: IGAWMAHTQFCDHHWEPQLIWTK*QMQRKK
Trigger: CTTTTTCCTTTGCATCTGTCACTTTGTCCAAATGAG...CTGTGGCTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGCGGCTCCCTCTGGCTaGTACCCTCGCGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALAAPSG*YPRALF
Trigger: GAAGAGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGC...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367007.5
ENST00000640710.1
CDS-3UTR GCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTACCTGCTGCTTGTCAGTaGTCTTGTCAGCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVPAACQ*SCQPSK
Trigger: TTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGG...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKALGASC*RTPLLL
Trigger: AAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAG...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSETLGAS*CRTPLL
Trigger: CAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGT...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCGTCTTTGGTGCCTCTTaGTTGTACTGGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAVFGAS*LYWGRM
Trigger: CATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGAC...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGCAGGCCATCCAGTGTaGAGCCAGCCCAAACACACA +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTAGHPV*SQPKHT
Trigger: TGTGTGTTTGGGCTGGCTGCACACTGGATGGCCTGC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACTCTCATAGTCCCCAATaGTGTACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GNIINGRACTFLLTFPSHSHSPQ*CTRCRP
Trigger: TGGCCTGCATCTGGTACAGCATTGGGGACTATGAGA...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCTCTCATAGTCCCCAATaGTGTACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCSHSPQ*CTRCRP
Trigger: TGGCCTGCATCTGGTACAGCATTGGGGACTATGAGA...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGACAGCCAGCTGTTGTTaGGGATTGTCTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQTASCC*GLSWCP
Trigger: AGGACACCAAGACAATCCGCAACAACAGCTGGCTGT...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKAELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TTTTTAAATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: FLNRPLSWLQKCLSLILGELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...CCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKASPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTTTTAAATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGTCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: FLNRPLSWLQKCLSLILGSPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...CCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: GEGASFNIRSVYILIQDLSPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCAATTCCAGCACTTTCTaGAGGGCATCCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAANSSTF*RASRLI
Trigger: GATCAAGCGGGATGCCCTGCAGAAAGTGCTGGAATT...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAATTCCAGCACTTTCTaGAGGGCATCCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: GNIINGRACTFLLTFPSHNSSTF*RASRLI
Trigger: GATCAAGCGGGATGCCCTGCAGAAAGTGCTGGAATT...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVSLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: QWCSWQHPQLTTKIVSAHWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...ATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACCCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: GCILQHKISLYPDTRSVNPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCAAGCGGGCCCAGCTTTTaGGCTTGGCACAATCGCCCC +
Preference number: 4 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGASGPSF*AWHNRP
Trigger: GGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCT...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASSRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRSRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTCTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 4 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGLLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACATCCCCAGATGGCTGCTaGTCTGTTCTGGTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTSPDGC*SVLVVL
Trigger: TAAAACTACCAGAACAGAGCAGCAGCCATCTGGGGA...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCCACCACACCTGCAGCTaGTTTTCTGGCCTTAACCAT +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPHHTCS*FSGLNH
Trigger: ATGGTTAAGGCCAGAAAAGCAGCTGCAGGTGTGGTG...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp CTGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACTCCAGCTCTTACCCTTaGCTCACCTCCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LRSSSWCEKEGRKVWLIYSSSYP*LTSFGE
Trigger: TTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGA...GTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTAGAGCAGGCTATGGGTTaGACCGCAGAGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLEQAMG*TAENPW
Trigger: CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTC...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCGCCTTATACCATCTTTaGCCCTCATACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFALYHL*PSYPEV
Trigger: GACCTCTGGGTATGAGGGGCAAAGATGGTATAAGGC...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGCTGGCGGCTCCCTCTaGCTGCTACCCTCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINIAGGSL*LLPSRP
Trigger: AGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGCCAGC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAG +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSVRRAS*RGFLRQ
Trigger: CTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGAC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGCCTTTTTGCACGCTTaGAGCCAGCTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTAFLHA*SQLLQD
Trigger: GTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAAGGCGGGAGTGCTTGTaGACATTCTCGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKRRECL*TFSPFC
Trigger: GCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCT...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAAGGCGGGAGTGCTTGTaGACATTCTCGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVRRECL*TFSPFC
Trigger: GCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCT...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCCACAGTATAAGGGACCAAGATaGCTGTATAGAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: IGAWMAHTQFCDHHWEPQYKGPR*LYRRSR
Trigger: TCTTGACCTTCTATACAGCCATCTTGGTCCCTTATA...CTGTGGCTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCAATCACCTCCCCTGCTaGTCCAACAAAGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPNHLPC*SNKGGM
Trigger: CATACCACCTTTGTTGGACCAGCAGGGGAGGTGATT...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCAATCACCTCCCCTGCTaGTCCAACAAAGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFNHLPC*SNKGGM
Trigger: CATACCACCTTTGTTGGACCAGCAGGGGAGGTGATT...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTCCCCTCCAGTGGTGGTaGAATCTGATCAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLPLQWW*NLISKT
Trigger: GGTTTTGCTGATCAGATTCCACCACCACTGGAGGGG...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271751.10
CDS-3UTR CCA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCAAGACAGAATTCTTGCTaGGACCACCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SKATSLHHLTESWKLTASRQNSC*DHLPTS
Trigger: GGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCT...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGAGACAGAATTCTTGCTaGGACCACCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQRQNSC*DHLPTS
Trigger: GGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCT...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGCTCAATGTCTGTGGATaGGGCGATGTTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVLNVCG*GDVPKA
Trigger: GGCTTTGGGAACATCGCCCCATCCACAGACATTGAG...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTCTCAATGTCTGTGGATaGGGCGATGTTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLLNVCG*GDVPKA
Trigger: GGCTTTGGGAACATCGCCCCATCCACAGACATTGAG...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGAATACATTCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: RIHSLGEGASFNIRSVYIGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...GATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGAATGTATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACAGGCGCCGGACAGGGTaGTCCGGGGGCAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYRRRTG*SGGKIR
Trigger: CCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASCCRNL*KRRRTG
Trigger: CCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASAFTRL*LAEACS
Trigger: AGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSEGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSEEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTCTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLLAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCACTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSLAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGACTGTGCCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: NRPLSWLQKCLSLILGTVPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...CACAGTCCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKADPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp TTTTTAAATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGGCCCACTGCAGTCCATaGGGGGTCTTGGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: FLNRPLSWLQKCLSLILGAHCSP*GVLAKE
Trigger: CTCCTTTGCCAAGACCCCCCATGGACTGCAGTGGGC...CCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CCA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGATGCCGGGAAGTCCTTaGCCCACTGCAGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: GEGASFNIRSVYILIQDLMPGSP*PTAVHG
Trigger: CCCATGGACTGCAGTGGGCCAAGGACTTCCCGGCAT...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCAGCTTCAAGTGTCTATaGGAGGCATGCACCACACCT +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFSFKCL*EACTTP
Trigger: AGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCT...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACATGCCATGGGGACACTTaGGAAGAGGCCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTCHGDT*EEAKKE
Trigger: TTCCTTCTTGGCCTCTTCCCAAGTGTCCCCATGGCA...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTACAGCTCCACTGTGCCTaGAAGAGACTTCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLQLHCA*KRLHSF
Trigger: AAAGGAGTGAAGTCTCTTCCAGGCACAGTGGAGCTG...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAACAGAGGTACCAGGAATaGGGTCACCGTCTAACACAG +
Preference number: 4 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKQRYQE*GHRLTQ
Trigger: CTGTGTTAGACGGTGACCCCATTCCTGGTACCTCTG...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTACTTGACATTGACCGTTaGGTGCCAGACAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLLDIDR*VPDKKP
Trigger: AGGCTTCTTGTCTGGCACCCAACGGTCAATGTCAAG...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAATGTAAGTATATGGGATaGCAGCGCCCATTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSHRYTVVFLAASSADHKCKYMG*QRPLLE
Trigger: CTCCAGCAATGGGCGCTGCCATCCCATATACTTACA...TTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGTGGAAGGCTGCTAAATaGGCTCAGCTTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: DLKGPSPALTLASPPLGKWKAAK*AQLFKY
Trigger: GTATTTAAAAAGCTGAGCCCATTTAGCAGCCTTCCA...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGTCCCCACAAGGGCCTaGACAAAGAGCTTGACAGTT +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCVPTRA*TKSLTV
Trigger: AACTGTCAAGCTCTTTGTCCAGGCCCTTGTGGGGAC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CCATCACTGGGAGCCACAGCTCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGAACACAATCTAGAATaGCCACCACCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: PSLGATAPRPLLSITLQREHNLE*PPPHHL
Trigger: AAGATGATGAGGTGGTGGCCATTCTAGATTGTGTTC...TCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGAGCTGTGGCTCCCAGTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
3UTR CAA 72 bp TCGCTGATCTTCCGGAACACAATCCTCTTCCTCAAGTaGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SLIFRNTILFLK*YVRIRFREKEW
Trigger: CCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAGGATTGTGTTCCGGAAGATCAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR CAA 72 bp GAGACCCCTTTAGACAGCATGTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: ETPLDSMSLLPK*CKDGSDAAATL
Trigger: CAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
3UTR CAA 72 bp CAGGAGCCTTTAGACAGCATGTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: QEPLDSMSLLPK*CKDGSDAAATL
Trigger: CAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640528.1
CDS-3UTR TCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQRSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDRWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTG +
Preference number: 4 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSITFPLP*ARPIKL
Trigger: CAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGT...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACGTGAGCCAATCATCATaGTGGCCACTGCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHVSQSS*WPLQRS
Trigger: AGATCTTTGCAGTGGCCATCATGATGATTGGCTCAC...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCGTGAGCCAATCATCATaGTGGCCACTGCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAVSQSS*WPLQRS
Trigger: AGATCTTTGCAGTGGCCATCATGATGATTGGCTCAC...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAACTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSELLHGR*GPLGHS
Trigger: ACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAG...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACGTTTCACATCGCTaGTCTTCCGGAACACAATCC +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCHVSHR*SSGTQS
Trigger: GGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGACAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACTGGAAGTTAATATCCTaGGTATCTCAGAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHWKLIS*VSQRAV
Trigger: AACAGCTCTCTGAGATACTCAGGATATTAACTTCCA...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCAAAAATGTCTCTCTCTaGTTCTGGGGACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPKNVSL*FWGLWP
Trigger: AGGCCACAGTCCCCAGAATCAGAGAGAGACATTTTT...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp TCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGTACAGGAAAACATGGTaGCGTCAGACACGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SGTCREFKSSSRGSRISLYRKTW*RQTRAV
Trigger: TACAGCCCGTGTCTGACGTCACCATGTTTTCCTGTA...CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAATGACCCCGTGCGGTaGACAAAATACAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCNDPVR*TKYKGL
Trigger: CAGACCTTTGTATTTTGTTCACCGCACGGGGTCATT...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAAGAGAGTACAATCATaGTCCTGCAGTCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDKRVQS*SCSLFP
Trigger: TGGAAAAAGACTGCAGGATCATGATTGTACTCTCTT...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATCAGTATTTGGGGTCCTaGCACCTCTCTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IINGRACTFLLTFPSHRYQYLGS*HLSLGH
Trigger: ATGCCCTAGAGAGAGGTGTCAGGACCCCAAATACTG...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCGGCTCTCAGAAACACTaGATATCTTTGGTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCGSQKH*ISLVGQ
Trigger: CTGCCCTACCAAAGATATTCAGTGTTTCTGAGAGCC...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACGCTGGGTTTTGGGGGTaGTTAGAGGCCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GCILQHKISLYPDTRSVNAGFWG*LEACPA
Trigger: GGCAGGGCAGGCCTCTAATCACCCCCAAAACCCAGC...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TGTTTCCGTCCTTTGGCTATCTTGTCATGTCCAGTGGAGGAGCCCTTTGTAAGTGTTTGCAGTCAGTGCTaGGAGGATCATGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: CFRPLAILSCPVEEPFVSVCSQC*EDHEVS
Trigger: GGAGACTTCATGATCCTCTCAGCACTGACTGCAAAC...ACTTACAAAGGGCTCCTCCACTGGACATGACAAGATAGCCAAAGGACGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAGTTTGCAGTCAGTGCTaGGAGGATCATGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKVCSQC*EDHEVS
Trigger: GGAGACTTCATGATCCTCTCAGCACTGACTGCAAAC...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAGTTTGCAGTCAGTGCTaGGAGGATCATGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVVCSQC*EDHEVS
Trigger: GGAGACTTCATGATCCTCTCAGCACTGACTGCAAAC...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp CAACGTGTATCTCCACCAGGGCTCCTAAAATTTCCCAGAGTATGCATGGGAGACTGGACAGTCTCCAACTaGTGCACAAATACAGCATCG +
Preference number: 4 (lower is better)
Translates to: QRVSPPGLLKFPRVCMGDWTVSN*CTNTAS
Trigger: CGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCA...GTCTCCCATGCATACTCTGGGAAATTTTAGGAGCCCTGGTGGAGATACACGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTTGAGAAAGCCTCTCTaGGGCTTTCTCAGGGAAATG +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAALRKPL*GFLREM
Trigger: CATTTCCCTGAGAAAGCCTCAGAGAGGCTTTCTCAA...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR GCA 90 bp AAAATTTCCCAGAGTATGCATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAAGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: KISQSMHGRHSGQCNKGKAGHPC*LSVLLS
Trigger: TGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGC...TTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGCTGCAGGACACCCCTaGTGCTTGTCAGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASAAGHP*CLSVLL
Trigger: CAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTGCAGGACACCCCTaGTGCTTGTCAGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSAAGHP*CLSVLL
Trigger: CAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGC...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LFKNVEKGISSMEGPARSLGASC*RTPLLL
Trigger: AAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAG...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYLGASC*RTPLLL
Trigger: AAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAG...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASSARRE*LWTFSP
Trigger: AGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACAGTCTTTGGTGCCTCTTaGTTGTACTGGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTVFGAS*LYWGRM
Trigger: CATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGAC...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAAGGGGGAGTCTTTGGTaGCTCTTGCTTGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTRGSLW*LLLVLG
Trigger: CCCCAGTACAAGCAAGAGGCACCAAAGACTCCCCCT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGCAGGCCATCCAGTGTaGAGCCAGCCCAAACACACA +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASAGHPV*SQPKHT
Trigger: TGTGTGTTTGGGCTGGCTGCACACTGGATGGCCTGC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCACAGCCAGCTGTTGTTaGGGATTGTCTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCTASCC*GLSWCP
Trigger: AGGACACCAAGACAATCCGCAACAACAGCTGGCTGT...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATTCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: IINGRACTFLLTFPSHRYSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGAACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGAGCCGGAAGGCCGGGTaGTCCTTGAACACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLSRKAG*SLNTLR
Trigger: CCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCT...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTTCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLSPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACCCCGGAGGTGGAGGCTaGCTGGAAGGATACGGGCGT +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYPGGGG*LEGYGR
Trigger: ACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGGG...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGCGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: LIEQLMDPSDDSEVTDKGRMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...CCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCATCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGASRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCCTCCTTCAGCTCGTaGCTCACCTCCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKASSFSS*LTSRTV
Trigger: CACAGTCCTGGAGGTGAGGCACGAGCTGAAGGAGGA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR GCA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCAGTACAAGGACGGGGATaGCGGGAAGTCCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGAVQGRG*REVLGP
Trigger: TGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTAC...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTCACCACACCTGCAGCTaGTTTTCTGGCCTTAACCAT +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLHHTCS*FSGLNH
Trigger: ATGGTTAAGGCCAGAAAAGCAGCTGCAGGTGTGGTG...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp AAGGAGAAGCCCCAGAATGATGAACTGCTCATAAGTAGAAGTGTCCTTGAGGTGCCATACCCTGAGGAATaGCATGGGGACACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: KEKPQNDELLISRSVLEVPYPEE*HGDTWE
Trigger: TTCCCAAGTGTCCCCATGGCATTCCTCAGGGTATGG...CACCTCAAGGACACTTCTACTTATGAGCAGTTCATCATTCTGGGGCTTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp ATGGGTTGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTAGTGTGTCTGTGTGTCTaGTTTGTTAATAAAGCAACT +
Preference number: 4 (lower is better)
Translates to: MGCTAENPWILRAPLQLLVCLCV*FVNKAT
Trigger: AGTTGCTTTATTAACAAAGCAGACACACAGACACAC...TAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACAATTAGAGGCCTGCCCTaGCTTAAAAGTGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CGQVHGAKRKGERFGSFTIRGLP*LKSGGS
Trigger: GGACCCACCACTTTTAAGGCAGGGCAGGCCTCTAAT...TGTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTACATTGACCGTTGGGTaGCAGACAAGAAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLTLTVG*QTRSLS
Trigger: TGACAGGCTTCTTGTCTGGCACCCAACGGTCAATGT...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAGCCTTATACCATCTTTaGCCCTCATACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVALYHL*PSYPEV
Trigger: GACCTCTGGGTATGAGGGGCAAAGATGGTATAAGGC...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAG +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFVRRAS*RGFLRQ
Trigger: CTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGAC...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACAGCCTTTTTGCACGCTTaGAGCCAGCTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTAFLHA*SQLLQD
Trigger: GTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGC...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGCCTTTTTGCACGCTTaGAGCCAGCTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASAFLHA*SQLLQD
Trigger: GTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TGTTTCCGTCCTTTGGCTATCTTGTCATGTCCAGTGGAGGAGCCCTTTGTAAGTAGACAGAATTCTTGCTaGGACCACCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: CFRPLAILSCPVEEPFVSRQNSC*DHLPTS
Trigger: GGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCT...ACTTACAAAGGGCTCCTCCACTGGACATGACAAGATAGCCAAAGGACGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCAGACAGAATTCTTGCTaGGACCACCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCRQNSC*DHLPTS
Trigger: GGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCT...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAAGACAGAATTCTTGCTaGGACCACCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVRQNSC*DHLPTS
Trigger: GGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCT...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAATCTTCTCAATGTCTGTaGATGGGGCGATGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PSHRYTVVFLAASSADHKSSQCL*MGRCSQ
Trigger: TTGGGAACATCGCCCCATCCACAGACATTGAGAAGA...TTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCACATTCCCGAAGATGGTaGCATAGAGAAGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SKATSLHHLTESWKLTASHSRRW*HREVSQ
Trigger: TTGGCTCACTTCTCTATGCCACCATCTTCGGGAATG...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCCATTCCCGAAGATGGTaGCATAGAGAAGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAHSRRW*HREVSQ
Trigger: TTGGCTCACTTCTCTATGCCACCATCTTCGGGAATG...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINIGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTGGAGGCAGCCATCACTaGCCAGCCGGAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: KEKENPIKDLAGLNGKSIGGSHH*PAGRPG
Trigger: ACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCC...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LFKNVEKGISSMEGPARSAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSEVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAACATTGGCACAGGACTaGGCAAGGGTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTTLAQD*ARVASF
Trigger: GAAGGAAGCCACCCTTGCCCAGTCCTGTGCCAATGT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAAGGCGCCGGACAGGGTaGTCCGGGGGCAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRRRRTG*SGGKIR
Trigger: CCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCT...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCAGGCGCCGGACAGGGTaGTCCGGGGGCAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSRRRTG*SGGKIR
Trigger: CCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: YKICELLIEQLMDPSDDSAFTRL*LAEACS
Trigger: AGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: KSSSRGSRISLICLHENEGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGACTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRLAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KSSSRGSRISLICLHENEACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACCCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCACCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGCCCACTGCAGTCCATaGGGGGTCTTGGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSAHCSP*GVLAKE
Trigger: CTCCTTTGCCAAGACCCCCCATGGACTGCAGTGGGC...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTATGCCGGGAAGTCCTTaGCCCACTGCAGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSMPGSP*PTAVHG
Trigger: CCCATGGACTGCAGTGGGCCAAGGACTTCCCGGCAT...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGACGTGGCATAGGGGCTTaGATGGCCCATACGCAGTTC +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRRGIGA*MAHTQF
Trigger: GAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCAGCTCCACTGTGCCTaGAAGAGACTTCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISQLHCA*KRLHSF
Trigger: AAAGGAGTGAAGTCTCTTCCAGGCACAGTGGAGCTG...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCAGCTCCACTGTGCCTaGAAGAGACTTCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCQLHCA*KRLHSF
Trigger: AAAGGAGTGAAGTCTCTTCCAGGCACAGTGGAGCTG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGAGCATGTTTAAGAAATaGCAGACTAGAATGTTAGGG +
Preference number: 4 (lower is better)
Translates to: DLKGPSPALTLASPPLGKSMFKK*QTRMLG
Trigger: CCCTAACATTCTAGTCTGCCATTTCTTAAACATGCT...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAACTGTCATCAAGTCCCTaGAGAGCTGAGAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: PSHRYTVVFLAASSADHKLSSSP*RAERQK
Trigger: TTTTTGCCTCTCAGCTCTCCAGGGACTTGATGACAG...TTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGCTTGACATTGACCGTTaGGTGCCAGACAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SGTCREFKSSSRGSRISLLDIDR*VPDKKP
Trigger: AGGCTTCTTGTCTGGCACCCAACGGTCAATGTCAAG...CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAATCCTGCCGCAGGAGCTaGCTTCCAGTCATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSESCRRS*LPVMSP
Trigger: TGGGCTCATGACTGGAAGCCAGCTCCTGCGGCAGGA...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGGGCACCCACCAGTCTaGCACCTGCAGGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSGHPPV*HLQGIQ
Trigger: TTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCC...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATACAGTGGTGTTCTTaGCAGCATCCTCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKIQWCS*QHPQLT
Trigger: GGTCAGCTGAGGATGCTGCCAAGAACACCACTGTAT...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCAGGGAATATCATCAATaGAAGGGCCTGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPREYHQ*KGLHVP
Trigger: AGGAACGTGCAGGCCCTTCCATTGATGATATTCCCT...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCAGGGAATATCATCAATaGAAGGGCCTGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAREYHQ*KGLHVP
Trigger: AGGAACGTGCAGGCCCTTCCATTGATGATATTCCCT...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGTCACATTCCCGAAGATaGTGGCATAGAGAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKSHSRR*WHREVL
Trigger: GAGCACTTCTCTATGCCACCATCTTCGGGAATGTGA...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
3UTR CAA 72 bp GTTTCTCAACCAAATGGTCGTCTCTGTTTCCGTCCTTaGGCTATCTTGTCATGTCCAGTGGAGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: VSQPNGRLCFRP*AILSCPVEEPF
Trigger: AAAGGGCTCCTCCACTGGACATGACAAGATAGCCAAAGGACGGAAACAGAGACGACCATTTGGTTGAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATAAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSIRSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGAGGCTGCTGATGCCCTaGCTCTCTCTCCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLRLLMP*LSLPSS
Trigger: ACTGGAGGGGAGAGAGAGTCAGGGCATCAGCAGCCT...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638498.1
CDS-3UTR TCA 90 bp AATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGACTGTGGTGAGCCAATCATCATaGTGGCCACTGCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: NRPLSWLQKCLSLILGTVVSQSS*WPLQRS
Trigger: AGATCTTTGCAGTGGCCATCATGATGATTGGCTCAC...CACAGTCCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR TCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGCTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLLLHGR*GPLGHS
Trigger: ACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAG...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp CAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATCACGTTTCACATCGCTaGTCTTCCGGAACACAATCC +
Preference number: 4 (lower is better)
Translates to: QWCSWQHPQLTTKIVSAHHVSHR*SSGTQS
Trigger: GGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...ATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTTCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCATCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTTCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCATCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: YKICELLIEQLMDPSDDSSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTCAGTGTGGCCTCGCCTaGCGCTTTTGTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSQCGLA*RFCPLG
Trigger: CCCGAGAGGACAAAAGCGTCAGGCGAGGCCACACTG...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATCGAGCTAGTTATAAATaGCAACTACAGGAAAACATG +
Preference number: 4 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDRASYK*QLQENM
Trigger: CATGTTTTCCTGTAGTTGTCATTTATAACTAGCTCG...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACGTGACCATGAGGCAGTaGAGTGTCCCCGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYVTMRQ*SVPEHR
Trigger: ACGATGCTCGGGGACACTTCACTGCCTCATGGTCAC...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCGTGACCATGAGGCAGTaGAGTGTCCCCGAGCATCGT +
Preference number: 4 (lower is better)
Translates to: LFKNVEKGISSMEGPARSVTMRQ*SVPEHR
Trigger: ACGATGCTCGGGGACACTTCACTGCCTCATGGTCAC...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCTCAAGTGAAAGAGGCTaGAGGCCTCACAGCTTTATT +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPSSERG*RPHSFI
Trigger: AATAAAGCTGTGAGGCCTTCAGCCTCTTTCACTTGA...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTTCATACCCAGAGGTCTaGGAAATTTCACGGACATCC +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLSYPEV*EISRTS
Trigger: GGATGTCCGTGAAATTTCTCAGACCTCTGGGTATGA...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACAGCTGGCTTCCAGTCATaGGCCCAGTTTGCGCTGATT +
Preference number: 4 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTAGFQS*AQFALI
Trigger: AATCAGCGCAAACTGGGCTCATGACTGGAAGCCAGC...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTGCTGAGAGGATCATaGAGTCTCCCCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSEVLRGS*SLPQVE
Trigger: CTCCACCTGGGGGAGACTTCATGATCCTCTCAGCAC...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKAAGHPC*LSVLLS
Trigger: TGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGC...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRAGHPC*LSVLLS
Trigger: TGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGC...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTTFSPF*TLGASC
Trigger: GCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATGTCTTTGGTGCCTCTTaGTTGTACTGGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: QWCSWQHPQLTTKIVSAHVFGAS*LYWGRM
Trigger: CATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGAC...ATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGAAGGGGGAGTCTTTGGTaGCTCTTGCTTGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRRGSLW*LLLVLG
Trigger: CCCCAGTACAAGCAAGAGGCACCAAAGACTCCCCCT...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCAGGGGGAGTCTTTGGTaGCTCTTGCTTGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKARGSLW*LLLVLG
Trigger: CCCCAGTACAAGCAAGAGGCACCAAAGACTCCCCCT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTATGTAGACAGAATTCTTaGTGGGACCACCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLCRQNS*WDHLPT
Trigger: AGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCTACA...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTTGTAGACAGAATTCTTaGTGGGACCACCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISCRQNS*WDHLPT
Trigger: AGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCTACA...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CACTTACTAGATAATGGTGCCACATATCATGCCCCGACTCCTCAAAGAGGAAAATCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: HLLDNGATYHAPTPQRGKSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...TTTTCCTCTTTGAGGAGTCGGGGCATGATATGTGGCACCATTATCTAGTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSETLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLSPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAATCCCCTGGGGCACAGTaGACCGTCTGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQSPGAQ*TVWNSM
Trigger: CATGGAGTTCCAGACGGTGCACTGTGCCCCAGGGGA...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTAGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGCCCCCTCTCTCAGCTaGCAGCCTGGCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYAPSLS*QPGLFL
Trigger: CAGAAAGAGGCCAGGCTGGCAGCTGAGAGAGGGGGC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTCGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASRMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGCGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: GEGASFNIRSVYILIQDLRMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLRMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRSRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 4 (lower is better)
Translates to: GCILQHKISLYPDTRSVNMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTATCCCCAGATGGCTGCTaGTCTGTTCTGGTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLSPDGC*SVLVVL
Trigger: TAAAACTACCAGAACAGAGCAGCAGCCATCTGGGGA...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGTCTATGGGAGGCATaGACCACACCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRCLWEA*TTPAAA
Trigger: AGCAGCTGCAGGTGTGGTGCATGCCTCCCATAGACA...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp ACAAACACCACCTCATTGACCATCTTAGTTCTTAGAGTTAACCTTAAACCCACCCGGCCAGCTCCACTGTaGCTGGAAGAGACTTCACTC +
Preference number: 4 (lower is better)
Translates to: TNTTSLTILVLRVNLKPTRPAPL*LEETSL
Trigger: GAGTGAAGTCTCTTCCAGGCACAGTGGAGCTGGCCG...GGTGGGTTTAAGGTTAACTCTAAGAACTAAGATGGTCAATGAGGTGGTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTCGGCCAGCTCCACTGTaGCTGGAAGAGACTTCACTC +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLRPAPL*LEETSL
Trigger: GAGTGAAGTCTCTTCCAGGCACAGTGGAGCTGGCCG...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp ACAAACACCACCTCATTGACCATCTTAGTTCTTAGAGTTAACCTTAAACCCACCCATCTGTGCCAACCCTaGGAACCAGGAGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TNTTSLTILVLRVNLKPTHLCQP*EPGEVS
Trigger: GCTGACCTCTCCTGGTTCGCAGGGTTGGCACAGATG...GGTGGGTTTAAGGTTAACTCTAAGAACTAAGATGGTCAATGAGGTGGTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACATTCCTCTTACTTGTATaGCGCCATCTGAGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTFLLLV*RHLRLN
Trigger: ATTTAGCCTCAGATGGCGGCATACAAGTAAGAGGAA...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTCGGTCAAGTTCATGGTaGGAAAAGGAAGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLRSSSW*EKEGRK
Trigger: CTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCG...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGACGACAGCAGGAAACTaGCCTCGGGGCCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRTTAGN*PRGPHA
Trigger: TGCGTGCGGGCCCCGAGGCCAGTTTCCTGCTGTCGT...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGACTGTTCGTTTCGAATTaGAGCAATTTTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: REGTHQSGTCREFKSSSRLFVSN*SNFHKE
Trigger: TTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAG...TCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTTTTAAATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGGCCTCTTGCTTGTACTaGGGAAGGATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: FLNRPLSWLQKCLSLILGASCLY*GRMSEP
Trigger: GGGCTCAGACATCCTTCCCCAGTACAAGCAAGAGGC...CCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGTGAGGGGGAGTCTTTaGTGCCTCTTGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTVRGSL*CLLLVL
Trigger: CAGTACAAGCAAGAGGCACCAAAGACTCCCCCTCAC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAAATCACCTCCCCTGCTaGTCCAACAAAGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSNHLPC*SNKGGM
Trigger: CATACCACCTTTGTTGGACCAGCAGGGGAGGTGATT...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTATGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLCCGLS*CPRQRS
Trigger: AGATCTTTGACGAGGACACCAAGACAATCCGCAACA...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCTGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCCCGLS*CPRQRS
Trigger: AGATCTTTGACGAGGACACCAAGACAATCCGCAACA...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGTGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQCCGLS*CPRQRS
Trigger: AGATCTTTGACGAGGACACCAAGACAATCCGCAACA...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATGTCCATCGCTAGTTaGTACAGCCAGCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKMSIAS*YSQLLL
Trigger: CAACAACAGCTGGCTGTACCAACTAGCGATGGACAT...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTACATTCCCGAAGATGGTaGCATAGAGAAGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLHSRRW*HREVSQ
Trigger: TTGGCTCACTTCTCTATGCCACCATCTTCGGGAATG...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGCATTCCCGAAGATGGTaGCATAGAGAAGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SGTCREFKSSSRGSRISLHSRRW*HREVSQ
Trigger: TTGGCTCACTTCTCTATGCCACCATCTTCGGGAATG...CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATACAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 4 (lower is better)
Translates to: HQSGTCREFKSSSRGSRIQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLEEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTCTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSLAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLEACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGCCCAGCTTTTGCGCTTaGCACAATCGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRPSFCA*HNRPRP
Trigger: GGGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGG...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACACCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGAATACATTCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: RIHSLGEGASFNIRSVYIMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...GATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGAATGTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAATAGACCTCTCAGCTaGCTCCAAAAATGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTNRPLS*LQKCLS
Trigger: AGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGCCCACTGCAGTCCATaGGGGGTCTTGGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQAHCSP*GVLAKE
Trigger: CTCCTTTGCCAAGACCCCCCATGGACTGCAGTGGGC...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATAGCTTCAAGTGTCTATaGGAGGCATGCACCACACCT +
Preference number: 4 (lower is better)
Translates to: IINGRACTFLLTFPSHRYSFKCL*EACTTP
Trigger: AGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCT...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACTTAATAAAGCAACTCTaGGCTCATGACCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHLIKQL*AHDPSC
Trigger: GCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAA...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTCGTGGCATAGGGGCTTaGATGGCCCATACGCAGTTC +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLRGIGA*MAHTQF
Trigger: GAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATATCTGTTTCCGTCCTTTaGCTATCTTGTCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: HQSGTCREFKSSSRGSRISVSVL*LSCHVQ
Trigger: CTGGACATGACAAGATAGCCAAAGGACGGAAACAGA...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CAACGTGTATCTCCACCAGGGCTCCTAAAATTTCCCAGAGTATGCATGGGAGACTCTGTTTCCGTCCTTTaGCTATCTTGTCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: QRVSPPGLLKFPRVCMGDSVSVL*LSCHVQ
Trigger: CTGGACATGACAAGATAGCCAAAGGACGGAAACAGA...GTCTCCCATGCATACTCTGGGAAATTTTAGGAGCCCTGGTGGAGATACACGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAACAGCTCTATCACAGCTaGAGTTCCATTCAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKQLYHS*SSIQGS
Trigger: AGACCCTTGAATGGAACTCCAGCTGTGATAGAGCTG...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGGAGAGGAAGGGGCATTaGCAGCTCTATCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRERKGH*QLYHSW
Trigger: CCAGCTGTGATAGAGCTGCCAATGCCCCTTCCTCTC...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGGGCACCCACCAGTCTaGCACCTGCAGGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSGHPPV*HLQGIQ
Trigger: TTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCC...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp GCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAATACAGTGGTGTTCTTaGCAGCATCCTCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: ATDIQWCSWQHPQLTTKIIQWCS*QHPQLT
Trigger: GGTCAGCTGAGGATGCTGCCAAGAACACCACTGTAT...TATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTACATTCCCGAAGATGGTaGCATAGAGAAGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVHSRRW*HREVLI
Trigger: GATGAGCACTTCTCTATGCCACCATCTTCGGGAATG...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR TCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGGCCAGTCCACTATCTaGGCATTCCCCAACACAAAA +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTGQSTI*AFPNTK
Trigger: TTTTGTGTTGGGGAATGCTCAGATAGTGGACTGGCC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASTFPLP*ARPIKL
Trigger: CAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGGCCGGGTGCTCCTTaGACACCTTGCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSRPGAP*TPCGSG
Trigger: ACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAACTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLELLHGR*GPLGHS
Trigger: ACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAG...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACTCCTGCATGGTAGATaGGGTCCCCTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALLLHGR*GPLGHS
Trigger: ACTGTGCCCCAGGGGACCTCATCTACCATGCAGGAG...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGACTCTCACGCACGGTaGCCACGCTGGCCTTCACGA +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSDSHAR*PRWPSR
Trigger: TCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACGCAAGTCGCTCTTGGTaGTGCCACTGTCACACGAGT +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYASRSW*CHCHTS
Trigger: ACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGC...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCGCAAGTCGCTCTTGGTaGTGCCACTGTCACACGAGT +
Preference number: 4 (lower is better)
Translates to: LFKNVEKGISSMEGPARSASRSW*CHCHTS
Trigger: ACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGC...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTGGCGTTTAAGGCCTTaGTGTCCTCCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRWRLRP*CPPSAR
Trigger: ACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCA...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp TCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGTGCCACTTGCTACAGTTCTaGGGTTGTGTGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SILVILAFKALMSSFSSCHLLQF*GCVCLC
Trigger: ACACAGACACACACAACCTCAGAACTGTAGCAAGTG...GCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR TCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACAGTATTTGGGGTCCTaGCACCTCTCTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLQYLGS*HLSLGH
Trigger: ATGCCCTAGAGAGAGGTGTCAGGACCCCAAATACTG...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGCCACACGTGCACCTGTaGCCCAAGATGAACAGATTC +
Preference number: 4 (lower is better)
Translates to: GEGASFNIRSVYILIQDLPHVHL*PKMNRF
Trigger: GAATCTGTTCATCTTGGGTCACAGGTGCACGTGTGG...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAACAGGTCACTGGTATCTaGGGCACATGGTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KSSSRGSRISLICLHENEQVTGI*GTWSWL
Trigger: GAGCCAGGACCATGTGCCTCAGATACCAGTGACCTG...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAGTGCTGAGAGGATCATaGAGTCTCCCCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRVLRGS*SLPQVE
Trigger: CTCCACCTGGGGGAGACTTCATGATCCTCTCAGCAC...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGGCCTCAGCACATTTTaGGAAAGCCTCTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASGLSTF*ESLSEA
Trigger: AGCCTCAGAGAGGCTTTCTCAAAATGTGCTGAGGCC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSTLGAS*CRTPLL
Trigger: CAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKATFSPF*TLGASC
Trigger: GCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACAACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTTFSPF*TLGASC
Trigger: GCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGTCTTTGGTGCCTCTTaGTTGTACTGGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTVFGAS*LYWGRM
Trigger: CATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGAC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp CACTTACTAGATAATGGTGCCACATATCATGCCCCGACTCCTCAAAGAGGAAAAACAGCCAGCTGTTGTTaGGGATTGTCTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: HLLDNGATYHAPTPQRGKTASCC*GLSWCP
Trigger: AGGACACCAAGACAATCCGCAACAACAGCTGGCTGT...TTTTCCTCTTTGAGGAGTCGGGGCATGATATGTGGCACCATTATCTAGTAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCCATCATGATGGCCACTaGAAAGATCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCHHDGH*KDLLNV
Trigger: GACATTGAGAAGATCTTTGCAGTGGCCATCATGATG...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKASLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGAACTCCATGGCCAGTaGCCGGAGGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYELHGQ*PEAAIT
Trigger: AGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAAATTTCCCAGAGTATGCATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAAAATTCCAGCACTTTCTaGAGGGCATCCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: KISQSMHGRHSGQCNKGKNSSTF*RASRLI
Trigger: GATCAAGCGGGATGCCCTGCAGAAAGTGCTGGAATT...TTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASSLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTTGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCCAGGACTGTGGCCTaGAGCGTCTGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYSRTVA*SVCSGM
Trigger: CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAATGCAGCTGCCACCTTaGAGGGTAGGGGCACGCTAC +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALMQLPP*RVGARY
Trigger: GTAGCGTGCCCCTACCCTGCAAGGTGGCAGCTGCAT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR GCA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCACAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: YKICELLIEQLMDPSDDSQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTCCCCAGATGGCTGCTaGTCTGTTCTGGTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: QWCSWQHPQLTTKIVSAHSPDGC*SVLVVL
Trigger: TAAAACTACCAGAACAGAGCAGCAGCCATCTGGGGA...ATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGGCATGCACCACACCTaGAGCTGCTTTTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSGMHHT*SCFSGL
Trigger: AAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCC...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATCCAGCTCTTACCCTTaGCTCACCTCCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRSSSYP*LTSFGE
Trigger: TTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGA...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCTTCCTCTTACTTGTATaGCGCCATCTGAGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPFLLLV*RHLRLN
Trigger: ATTTAGCCTCAGATGGCGGCATACAAGTAAGAGGAA...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATACGGTCAAGTTCATGGTaGGAAAAGGAAGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ATDIQWCSWQHPQLTTKIRSSSW*EKEGRK
Trigger: CTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCG...TATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATATTCATTAGGGGAGGGTaGATCCTTCAACATAAGATC +
Preference number: 4 (lower is better)
Translates to: HQSGTCREFKSSSRGSRIFIRGG*ILQHKI
Trigger: GATCTTATGTTGAAGGATGCACCCTCCCCTAATGAA...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACAATCAATGGAAGGGCCTaGACGTTCCTCTTAACATTC +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTINGRA*TFLLTF
Trigger: GAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGAT...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGGCCTTTTTGCACGCTTaGAGCCAGCTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLAFLHA*SQLLQD
Trigger: GTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGC...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCAGGCGGGAGTGCTTGTaGACATTCTCGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKARRECL*TFSPFC
Trigger: GCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGCCTCTTGCTTGTACTaGGGAAGGATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSASCLY*GRMSEP
Trigger: GGGCTCAGACATCCTTCCCCAGTACAAGCAAGAGGC...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGCCTCTTGCTTGTACTaGGGAAGGATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSASCLY*GRMSEP
Trigger: GGGCTCAGACATCCTTCCCCAGTACAAGCAAGAGGC...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGTGAGGGGGAGTCTTTaGTGCCTCTTGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASVRGSL*CLLLVL
Trigger: CAGTACAAGCAAGAGGCACCAAAGACTCCCCCTCAC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACAGTGAGGGGGAGTCTTTaGTGCCTCTTGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTVRGSL*CLLLVL
Trigger: CAGTACAAGCAAGAGGCACCAAAGACTCCCCCTCAC...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACATCTCCCCTCCAGTGGTaGTGGAATCTGATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTSPLQW*WNLISK
Trigger: TTTGCTGATCAGATTCCACCACCACTGGAGGGGAGA...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638498.1
CDS-3UTR CCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGTGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVCCGLS*CPRQRS
Trigger: AGATCTTTGACGAGGACACCAAGACAATCCGCAACA...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCCTCAATGTCTGTGGATaGGGCGATGTTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKALNVCG*GDVPKA
Trigger: GGCTTTGGGAACATCGCCCCATCCACAGACATTGAG...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GCTGAAGGCCTCACAGCTTTATTCAAAGTCACAGATAGTTGTGACTCGGCCTTATCTTCTCAATGTCTGTaGATGGGGCGATGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: AEGLTALFKVTDSCDSALSSQCL*MGRCSQ
Trigger: TTGGGAACATCGCCCCATCCACAGACATTGAGAAGA...TAAGGCCGAGTCACAACTATCTGTGACTTTGAATAAAGCTGTGAGGCCTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTACAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAGCACAGTGCACCGTCTaGAACTCCATGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLEAQCTV*NSMASA
Trigger: GGCACTGGCCATGGAGTTCCAGACGGTGCACTGTGC...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGTAGATGAGGTCCCCTaGGGCACAGTGCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSVDEVP*GTVHRL
Trigger: CAGACGGTGCACTGTGCCCCAGGGGACCTCATCTAC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTAGGACTGGGCAAGGGTaGCTTCCTTCCAGAACACAT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASRTGQG*LPSRTH
Trigger: ATGTGTTCTGGAAGGAAGCCACCCTTGCCCAGTCCT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCAACATTGGCACAGGACTaGGCAAGGGTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGATLAQD*ARVASF
Trigger: GAAGGAAGCCACCCTTGCCCAGTCCTGTGCCAATGT...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAGGAAGGATACGGGCGTaGCAGGACTCTCACGCACGG +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRGRIRA*QDSHAR
Trigger: CCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCC...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGAGGTGGAGGCTGCCTaGAAGGATACGGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSEVEAA*KDTGVA
Trigger: TGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCTGGCACCCCGGAGGTaGAGGCTGCCTGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSLAPRR*RLPGRI
Trigger: TATCCTTCCAGGCAGCCTCCACCTCCGGGGTGCCAG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGCCTGTAGCTTTGCGTaGTCTGGCACCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINIACSFA*SGTPEV
Trigger: CACCTCCGGGGTGCCAGACCACGCAAAGCTACAGGC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGCCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAATGGGACTCCGATCCTaGGGACTCCTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRMGLRS*GLLASP
Trigger: GGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCAT...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACCTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 4 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp AATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGACTGTGTTAATAAAGCAACTCTaGGCTCATGACCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NRPLSWLQKCLSLILGTVLIKQL*AHDPSC
Trigger: GCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAA...CACAGTCCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTACACCTTACAGAGAGCTaGAAACTCACTGCTTCATTC +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVHLTES*KLTASF
Trigger: GAATGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTG...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CCAAGAACATGTCTGGACTTCAAAGCCTTATACCATCTTTGCCCCTCATACCCACTGTCATCAAGTCCCTaGAGAGCTGAGAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: PRTCLDFKALYHLCPSYPLSSSP*RAERQK
Trigger: TTTTTGCCTCTCAGCTCTCCAGGGACTTGATGACAG...TGGGTATGAGGGGCAAAGATGGTATAAGGCTTTGAAGTCCAGACATGTTCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACACCCCAAGAACATGTCTaGACTTCAAAGCCTTATACC +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTPQEHV*TSKPYT
Trigger: GGTATAAGGCTTTGAAGTCCAGACATGTTCTTGGGG...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGAATACATTCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTCGGGAACCCAGAGTaGCATCCTGGCATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RIHSLGEGASFNIRSVYILGNPE*HPGMGR
Trigger: CCTTCCCATGCCAGGATGCCACTCTGGGTTCCCGAG...GATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGAATGTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAACTCGGGAACCCAGAGTaGCATCCTGGCATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLELGNPE*HPGMGR
Trigger: CCTTCCCATGCCAGGATGCCACTCTGGGTTCCCGAG...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCTTTCCAAAAGTTTGCTaGAAGGCTGCTAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCFPKVC*KAAKWA
Trigger: AGCCCATTTAGCAGCCTTCCAGCAAACTTTTGGAAA...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGGGATCGAAGAGGTTGTaGGTAAAACAGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GEGASFNIRSVYILIQDLGSKRL*VKQSPG
Trigger: CCCTGGGGACTGTTTTACCCACAACCTCTTCGATCC...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATAGGGAATATCATCAATaGAAGGGCCTGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: IINGRACTFLLTFPSHRYREYHQ*KGLHVP
Trigger: AGGAACGTGCAGGCCCTTCCATTGATGATATTCCCT...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
3UTR CAA 72 bp CCAAATGGTCGTCTCTGTTTCCGTCCTTTGGCTATCTaGTCATGTCCAGTGGAGGAGCCCTTTGTAAGTATA +
Preference number: 4 (lower is better)
Translates to: PNGRLCFRPLAI*SCPVEEPFVSI
Trigger: TATACTTACAAAGGGCTCCTCCACTGGACATGACAAGATAGCCAAAGGACGGAAACAGAGACGACCATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGCCCCCAGCCTTTACATaGATCATCCTCAATTGGCTG +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRPPAFT*IILNWL
Trigger: CAGCCAATTGAGGATGATTCATGTAAAGGCTGGGGG...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPRWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAAGGCTGCTGATGCCCTaGCTCTCTCTCCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRRLLMP*LSLPSS
Trigger: ACTGGAGGGGAGAGAGAGTCAGGGCATCAGCAGCCT...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271751.10
CDS-3UTR TCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTG +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSETFPLP*ARPIKL
Trigger: CAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGT...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGTGAGCCAATCATCATaGTGGCCACTGCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTVSQSS*WPLQRS
Trigger: AGATCTTTGCAGTGGCCATCATGATGATTGGCTCAC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCCACGTTTCACATCGCTaGTCTTCCGGAACACAATCC +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKAHVSHR*SSGTQS
Trigger: GGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGGCAAGTCGCTCTTGGTaGTGCCACTGTCACACGAGT +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLASRSW*CHCHTS
Trigger: ACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGC...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCTGGAAGTTAATATCCTaGGTATCTCAGAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPWKLIS*VSQRAV
Trigger: AACAGCTCTCTGAGATACTCAGGATATTAACTTCCA...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTGGAAGTTAATATCCTaGGTATCTCAGAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAWKLIS*VSQRAV
Trigger: AACAGCTCTCTGAGATACTCAGGATATTAACTTCCA...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp CACTTACTAGATAATGGTGCCACATATCATGCCCCGACTCCTCAAAGAGGAAAAAAAAATGTCTCTCTCTaGTTCTGGGGACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: HLLDNGATYHAPTPQRGKKNVSL*FWGLWP
Trigger: AGGCCACAGTCCCCAGAATCAGAGAGAGACATTTTT...TTTTCCTCTTTGAGGAGTCGGGGCATGATATGTGGCACCATTATCTAGTAAGTG
46% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATACAGGAAAACATGGTaGCGTCAGACACGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRYRKTW*RQTRAV
Trigger: TACAGCCCGTGTCTGACGTCACCATGTTTTCCTGTA...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTGAGACAGAAAGTTTCTaGGCTCTACCCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLETESF*ALPSCP
Trigger: GGGACAGGAGGGTAGAGCTCAGAAACTTTCTGTCTC...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCGCAGGGCAATCCCAATaGGAATCAAAGTATAAACAT +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFAGQSQ*ESKYKH
Trigger: ATGTTTATACTTTGATTCTCATTGGGATTGCCCTGC...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACGCAGGGCAATCCCAATaGGAATCAAAGTATAAACAT +
Preference number: 4 (lower is better)
Translates to: GNIINGRACTFLLTFPSHAGQSQ*ESKYKH
Trigger: ATGTTTATACTTTGATTCTCATTGGGATTGCCCTGC...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AAGGAGAAGCCCCAGAATGATGAACTGCTCATAAGTAGAAGTGTCCTTGAGGTGCCTGTAAGCCTGATGTaGGAAGCTACATATGAGGTT +
Preference number: 4 (lower is better)
Translates to: KEKPQNDELLISRSVLEVPVSLM*EATYEV
Trigger: AACCTCATATGTAGCTTCTCACATCAGGCTTACAGG...CACCTCAAGGACACTTCTACTTATGAGCAGTTCATCATTCTGGGGCTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp CTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGTGGACAGTCTCCAACTaGTGCACAAATACAGCATCG +
Preference number: 4 (lower is better)
Translates to: LIEQLMDPSDDSEVTDKGWTVSN*CTNTAS
Trigger: CGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCA...CCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTTCCTTGAGGTGTCGGTaGAATGTCGGATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSSLRCR*NVGCGQ
Trigger: CTGTCCACATCCGACATTTCACCGACACCTCAAGGA...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGCTCATTTGGACAAAGTaGCAGATGCAAAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQLIWTK*QMQRKK
Trigger: CTTTTTCCTTTGCATCTGTCACTTTGTCCAAATGAG...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGGGGGTGGCTTCTCCTaGCAGAAAGTGAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYGGGFS*QKVRLL
Trigger: GAGCAGTCTCACTTTCTGTCAGGAGAAGCCACCCCC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367007.5
ENST00000638498.1
CDS-3UTR TCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGGGGGTGGCTTCTCCTaGCAGAAAGTGAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSGGGFS*QKVRLL
Trigger: GAGCAGTCTCACTTTCTGTCAGGAGAAGCCACCCCC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367007.5
ENST00000638498.1
CDS-3UTR GCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAACCTGCTGCTTGTCAGTaGTCTTGTCAGCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSEPAACQ*SCQPSK
Trigger: TTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGG...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCACCTGCTGCTTGTCAGTaGTCTTGTCAGCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSPAACQ*SCQPSK
Trigger: TTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGG...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRAGHPC*LSVLLS
Trigger: TGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGC...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGCTGCAGGACACCCCTaGTGCTTGTCAGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSAAGHP*CLSVLL
Trigger: CAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSLGASC*RTPLLL
Trigger: AAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYTFSPF*TLGASC
Trigger: GCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSSARRE*LWTFSP
Trigger: AGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACAGTCTTTGGTGCCTCTTaGTTGTACTGGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTVFGAS*LYWGRM
Trigger: CATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGAC...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTCTCATAGTCCCCAATaGTGTACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRSHSPQ*CTRCRP
Trigger: TGGCCTGCATCTGGTACAGCATTGGGGACTATGAGA...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTCATAGTCCCCAATaGTGTACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKASHSPQ*CTRCRP
Trigger: TGGCCTGCATCTGGTACAGCATTGGGGACTATGAGA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTCTCATAGTCCCCAATaGTGTACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASSHSPQ*CTRCRP
Trigger: TGGCCTGCATCTGGTACAGCATTGGGGACTATGAGA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACATCTCATAGTCCCCAATaGTGTACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTSHSPQ*CTRCRP
Trigger: TGGCCTGCATCTGGTACAGCATTGGGGACTATGAGA...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTACAGCCAGCTGTTGTTaGGGATTGTCTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASTASCC*GLSWCP
Trigger: AGGACACCAAGACAATCCGCAACAACAGCTGGCTGT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCATCATGATGGCCACTaGAAAGATCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCHHDGH*KDLLNV
Trigger: GACATTGAGAAGATCTTTGCAGTGGCCATCATGATG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLETLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTAATTCCAGCACTTTCTaGAGGGCATCCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASNSSTF*RASRLI
Trigger: GATCAAGCGGGATGCCCTGCAGAAAGTGCTGGAATT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTAAATTCCAGCACTTTCTaGAGGGCATCCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLNSSTF*RASRLI
Trigger: GATCAAGCGGGATGCCCTGCAGAAAGTGCTGGAATT...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp ACAAACACCACCTCATTGACCATCTTAGTTCTTAGAGTTAACCTTAAACCCACCAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TNTTSLTILVLRVNLKPTSLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...GGTGGGTTTAAGGTTAACTCTAAGAACTAAGATGGTCAATGAGGTGGTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGCGAATGCTTGACCTCTaGCAGGATGGGACTCCGATC +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLRMLDL*QDGTPI
Trigger: GATCGGAGTCCCATCCTGGCAGAGGTCAAGCATTCG...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCCTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCLLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACGGCATGCACCACACCTaGAGCTGCTTTTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GCILQHKISLYPDTRSVNGMHHT*SCFSGL
Trigger: AAGGCCAGAAAAGCAGCTGCAGGTGTGGTGCATGCC...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACATATAAACATAGCACTTaGTACAGTTCTGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTYKHST*YSSEVV
Trigger: CACAACCTCAGAACTGTAGCAAGTGCTATGTTTATA...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTACAAAATACAAAGGTCTaGAGGGCAATCCCAATGAGA +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLQNTKV*RAIPMR
Trigger: TCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTG...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTACCTATAATGACCCCGTaGGGTGAACAAAATACAAAG +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLPIMTP*GEQNTK
Trigger: CTTTGTATTTTGTTCACCGCACGGGGTCATTATAGG...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCTCCCAGGGCCATCTGTaGCAACCCTGCGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFSQGHL*QPCEPG
Trigger: TCCTGGTTCGCAGGGTTGGCACAGATGGCCCTGGGA...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTATTAGAGGCCTGCCCTaGCTTAAAAGTGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSIRGLP*LKSGGS
Trigger: GGACCCACCACTTTTAAGGCAGGGCAGGCCTCTAAT...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGACAGCACAAAGCAGCCTaGGGTCAAGTTCATGGTGCG +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRQHKAA*GQVHGA
Trigger: CGCACCATGAACTTGACCGCAGGCTGCTTTGTGCTG...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAATGGTGCCACATATCATaGCCCGACTCCTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSEWCHIS*PDSSKR
Trigger: CCTCTTTGAGGAGTCGGGGCATGATATGTGGCACCA...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGAAATTTCCCAGAGTATaGATGGGAGACATAGTGGTC +
Preference number: 4 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVKFPRV*MGDIVV
Trigger: GACCACTATGTCTCCCATGCATACTCTGGGAAATTT...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTATTCATTAGGGGAGGGTaGATCCTTCAACATAAGATC +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVFIRGG*ILQHKI
Trigger: GATCTTATGTTGAAGGATGCACCCTCCCCTAATGAA...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTTTCATTAGGGGAGGGTaGATCCTTCAACATAAGATC +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISFIRGG*ILQHKI
Trigger: GATCTTATGTTGAAGGATGCACCCTCCCCTAATGAA...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTATTCATTAGGGGAGGGTaGATCCTTCAACATAAGATC +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLFIRGG*ILQHKI
Trigger: GATCTTATGTTGAAGGATGCACCCTCCCCTAATGAA...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTCTGTTCGTTTCGAATTaGAGCAATTTTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSLFVSN*SNFHKE
Trigger: TTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAG...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACGTGAGGGGGAGTCTTTaGTGCCTCTTGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYVRGSL*CLLLVL
Trigger: CAGTACAAGCAAGAGGCACCAAAGACTCCCCCTCAC...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCAATCACCTCCCCTGCTaGTCCAACAAAGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKANHLPC*SNKGGM
Trigger: CATACCACCTTTGTTGGACCAGCAGGGGAGGTGATT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCTGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSICCGLS*CPRQRS
Trigger: AGATCTTTGACGAGGACACCAAGACAATCCGCAACA...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTCTCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGATGTCCATCGCTAGTTaGTACAGCCAGCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: FSILVILAFKALMSSFSSMSIAS*YSQLLL
Trigger: CAACAACAGCTGGCTGTACCAACTAGCGATGGACAT...CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCAGACAGAATTCTTGCTaGGACCACCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKARQNSC*DHLPTS
Trigger: GGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGAAGACAGAATTCTTGCTaGGACCACCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRRQNSC*DHLPTS
Trigger: GGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCT...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACACATTCCCGAAGATGGTaGCATAGAGAAGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTHSRRW*HREVSQ
Trigger: TTGGCTCACTTCTCTATGCCACCATCTTCGGGAATG...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGTCACATTCCCGAAGATaGTGGCATAGAGAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LIEQLMDPSDDSEVTDKGSHSRR*WHREVS
Trigger: GCTCACTTCTCTATGCCACCATCTTCGGGAATGTGA...CCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATCCTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: ILFLKLYVRIRFREKEWEGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...CTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACACTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTLTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAGGAGAAGCCCCAGAATGATGAACTGCTCATAAGTAGAAGTGTCCTTGAGGTGCAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 4 (lower is better)
Translates to: KEKPQNDELLISRSVLEVQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...CACCTCAAGGACACTTCTACTTATGAGCAGTTCATCATTCTGGGGCTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAAGGACTGGGCAAGGGTaGCTTCCTTCCAGAACACAT +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSERTGQG*LPSRTH
Trigger: ATGTGTTCTGGAAGGAAGCCACCCTTGCCCAGTCCT...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACAGGACTGGGCAAGGGTaGCTTCCTTCCAGAACACAT +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYRTGQG*LPSRTH
Trigger: ATGTGTTCTGGAAGGAAGCCACCCTTGCCCAGTCCT...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAACATTGGCACAGGACTaGGCAAGGGTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQTLAQD*ARVASF
Trigger: GAAGGAAGCCACCCTTGCCCAGTCCTGTGCCAATGT...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCTGCTGTCGGAATCTCTaGAAGAGGCGCCGGACAGGG +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFCCRNL*KRRRTG
Trigger: CCCTGTCCGGCGCCTCTTCCAGAGATTCCGACAGCA...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSAFTRL*LAEACS
Trigger: AGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAGCCTTCACGAGGCTGTaGTTGGCGGAGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRAFTRL*LAEACS
Trigger: AGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTCTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLLSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGATCCTGGGGACTCCTaGCCTCACCCACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSDPGDS*PHPRCP
Trigger: TGGACAACGTGGGTGAGGCCAGGAGTCCCCAGGATC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGGCTGTTTCTCAATATTaGTCATTTTGGCGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGAVSQY*SFWRLR
Trigger: CCTTAAACGCCAAAATGACCAATATTGAGAAACAGC...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGACTGTGAATAGACCTCTCAGCTaGCTCCAAAAATGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NRPLSWLQKCLSLILGTVNRPLS*LQKCLS
Trigger: AGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT...CACAGTCCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTAATAGACCTCTCAGCTaGCTCCAAAAATGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLNRPLS*LQKCLS
Trigger: AGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp CAACAGATGGGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTGGTTGGCAAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QQMGFQIFYGLLPKDWLAKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...TGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCCCATCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTTGCCATGGGGACACTTaGGAAGAGGCCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLCHGDT*EEAKKE
Trigger: TTCCTTCTTGGCCTCTTCCCAAGTGTCCCCATGGCA...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATATGTCCCCGAGCATCGTaGCATAGGGGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINICPRAS*HRGLDG
Trigger: GCCATCCAAGCCCCTATGCCACGATGCTCGGGGACA...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTATTGCGTGTCAGTATTTaGGGTCCTGACACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLLRVSI*GPDTSL
Trigger: GAGAGAGGTGTCAGGACCCCAAATACTGACACGCAA...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGCTCTTACCCAAGGACTaGTTGGCAGCTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: GEGASFNIRSVYILIQDLLLPKD*LAASQV
Trigger: CACTTGAGAAGCTGCCAACCAGTCCTTGGGTAAGAG...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAAGAGCTGGAGGGAAATaGCAGGGCCTCTTGACATTG +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSRAGGK*QGLLTL
Trigger: CAATGTCAAGAGGCCCTGCCATTTCCCTCCAGCTCT...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGTTTCCAAAAGTTTGCTaGAAGGCTGCTAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVFPKVC*KAAKWA
Trigger: AGCCCATTTAGCAGCCTTCCAGCAAACTTTTGGAAA...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCACAGTCCCCAGGGATTaGATAACAAGAAGAAATCAA +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFTVPRD*ITRRNQ
Trigger: TTGATTTCTTCTTGTTATCCAATCCCTGGGGACTGT...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAGGGCACCCACCAGTCTaGCACCTGCAGGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLEGHPPV*HLQGIQ
Trigger: TTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCC...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
3UTR CAA 72 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPK*CKDGSDAAATL
Trigger: CAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
3UTR CAA 72 bp TACAGTTCTGAGGTTGTGTGTGTCTGTGTGTCTGCTTaGTTAATAAAGCAACTCTGGGCTCATGACCCTTCC +
Preference number: 4 (lower is better)
Translates to: YSSEVVCVCVSA*LIKQLWAHDPS
Trigger: GGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGCAGACACACAGACACACACAACCTCAGAACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTCCCCCAGCCTTTACATaGATCATCCTCAATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLPPAFT*IILNWL
Trigger: CAGCCAATTGAGGATGATTCATGTAAAGGCTGGGGG...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRRSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKARSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTG +
Preference number: 4 (lower is better)
Translates to: KSSSRGSRISLICLHENETFPLP*ARPIKL
Trigger: CAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGT...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACAGTGAGCCAATCATCATaGTGGCCACTGCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTVSQSS*WPLQRS
Trigger: AGATCTTTGCAGTGGCCATCATGATGATTGGCTCAC...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAACACGTTTCACATCGCTaGTCTTCCGGAACACAATCC +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSEHVSHR*SSGTQS
Trigger: GGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCCCGCAAGCATCTTTaGAGCGGGCCCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSSRKHL*SGPSFC
Trigger: GCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGCAAGTCGCTCTTGGTaGTGCCACTGTCACACGAGT +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYASRSW*CHCHTS
Trigger: ACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAGCAAGTCGCTCTTGGTaGTGCCACTGTCACACGAGT +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLEASRSW*CHCHTS
Trigger: ACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGC...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGGTAGAACGAATGCTTaGCCTCTGCCAGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALGRTNA*PLPGWD
Trigger: GTCCCATCCTGGCAGAGGTCAAGCATTCGTTCTACC...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTGGCGTTTAAGGCCTTaGTGTCCTCCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLWRLRP*CPPSAR
Trigger: ACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR TCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTATGGAAGTTAATATCCTaGGTATCTCAGAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLWKLIS*VSQRAV
Trigger: AACAGCTCTCTGAGATACTCAGGATATTAACTTCCA...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCACGAGCTAGTTATAAATaGCAACTACAGGAAAACATG +
Preference number: 4 (lower is better)
Translates to: SKATSLHHLTESWKLTASRASYK*QLQENM
Trigger: CATGTTTTCCTGTAGTTGTCATTTATAACTAGCTCG...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCACACTTGCTACAGTTCTaGGGTTGTGTGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSHLLQF*GCVCLC
Trigger: ACACAGACACACACAACCTCAGAACTGTAGCAAGTG...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATTTCTCAGATGCCATTaGGAGAAGCCCAAGCACATG +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRFLRCH*EKPKHM
Trigger: CATGTGCTTGGGCTTCTCTCAATGGCATCTGAGAAA...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACATTTCTCAGATGCCATTaGGAGAAGCCCAAGCACATG +
Preference number: 4 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTFLRCH*EKPKHM
Trigger: CATGTGCTTGGGCTTCTCTCAATGGCATCTGAGAAA...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AAATTAGACTTCCTCTTACTTGTATGCCGCCATCTGAGGCTAAATCTAATTATGACCTGTGACCCAAGATaGACAGATTCCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KLDFLLLVCRHLRLNLIMTCDPR*TDSCRR
Trigger: CCTGCGGCAGGAATCTGTTCATCTTGGGTCACAGGT...CATAATTAGATTTAGCCTCAGATGGCGGCATACAAGTAAGAGGAAGTCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAACCTGTGACCCAAGATaGACAGATTCCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLETCDPR*TDSCRR
Trigger: CCTGCGGCAGGAATCTGTTCATCTTGGGTCACAGGT...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTGTGCTGAGAGGATCATaGAGTCTCCCCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KEKENPIKDLAGLNGKSIVLRGS*SLPQVE
Trigger: CTCCACCTGGGGGAGACTTCATGATCCTCTCAGCAC...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTTGAGAAAGCCTCTCTaGGGCTTTCTCAGGGAAATG +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKALRKPL*GFLREM
Trigger: CATTTCCCTGAGAAAGCCTCAGAGAGGCTTTCTCAA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTTGAGAAAGCCTCTCTaGGGCTTTCTCAGGGAAATG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASLRKPL*GFLREM
Trigger: CATTTCCCTGAGAAAGCCTCAGAGAGGCTTTCTCAA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGCCTGCTGCTTGTCAGTaGTCTTGTCAGCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLPAACQ*SCQPSK
Trigger: TTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGG...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACCCTGCTGCTTGTCAGTaGTCTTGTCAGCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GCILQHKISLYPDTRSVNPAACQ*SCQPSK
Trigger: TTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGG...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAGCTGCAGGACACCCCTaGTGCTTGTCAGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRAAGHP*CLSVLL
Trigger: CAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGC...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTTCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: KEKENPIKDLAGLNGKSISARRE*LWTFSP
Trigger: AGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGA...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGATCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRSARRE*LWTFSP
Trigger: AGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGA...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAAGGGGGAGTCTTTGGTaGCTCTTGCTTGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALRGSLW*LLLVLG
Trigger: CCCCAGTACAAGCAAGAGGCACCAAAGACTCCCCCT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGGCAGGCCATCCAGTGTaGAGCCAGCCCAAACACACA +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRAGHPV*SQPKHT
Trigger: TGTGTGTTTGGGCTGGCTGCACACTGGATGGCCTGC...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCATGTAGACAGAATTCTTaGTGGGACCACCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSCRQNS*WDHLPT
Trigger: AGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCTACA...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAACCTTGCGGTTCAGGTaGACGCAGATGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRTLRFR*TQMSAL
Trigger: GAGAGCCGACATCTGCGTGCACCTGAACCGCAAGGT...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAAATTCCAGCACTTTCTaGAGGGCATCCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSNSSTF*RASRLI
Trigger: GATCAAGCGGGATGCCCTGCAGAAAGTGCTGGAATT...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 4 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCLLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATCCCCAGATGGCTGCTaGTCTGTTCTGGTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRSPDGC*SVLVVL
Trigger: TAAAACTACCAGAACAGAGCAGCAGCCATCTGGGGA...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR GCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGACCATACCCTGAGGAATaGCATGGGGACACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRPYPEE*HGDTWE
Trigger: TTCCCAAGTGTCCCCATGGCATTCCTCAGGGTATGG...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCGTGTGTCTGTGTGTCTaGTTTGTTAATAAAGCAACT +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAVCLCV*FVNKAT
Trigger: AGTTGCTTTATTAACAAAGCAGACACACAGACACAC...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCTATAAACATAGCACTTaGTACAGTTCTGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPYKHST*YSSEVV
Trigger: CACAACCTCAGAACTGTAGCAAGTGCTATGTTTATA...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCAAAATACAAAGGTCTaGAGGGCAATCCCAATGAGA +
Preference number: 4 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSIQNTKV*RAIPMR
Trigger: TCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTG...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGTCATGAGCCCAGTTTaGGCTGATTCACGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSVMSPV*ADSRVH
Trigger: ATGCACTCGTGAATCAGCGCAAACTGGGCTCATGAC...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGCCTTTTTGCACGCTTaGAGCCAGCTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINIAFLHA*SQLLQD
Trigger: GTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGAGGCGGGAGTGCTTGTaGACATTCTCGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLRRECL*TFSPFC
Trigger: GCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCT...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGCCTCTTGCTTGTACTaGGGAAGGATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSASCLY*GRMSEP
Trigger: GGGCTCAGACATCCTTCCCCAGTACAAGCAAGAGGC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGCCTCTTGCTTGTACTaGGGAAGGATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYASCLY*GRMSEP
Trigger: GGGCTCAGACATCCTTCCCCAGTACAAGCAAGAGGC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGAATACATTCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCGCCTCTTGCTTGTACTaGGGAAGGATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RIHSLGEGASFNIRSVYIASCLY*GRMSEP
Trigger: GGGCTCAGACATCCTTCCCCAGTACAAGCAAGAGGC...GATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGAATGTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATATATAAGGGACCAAGATaGCTGTATAGAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSIYKGPR*LYRRSR
Trigger: TCTTGACCTTCTATACAGCCATCTTGGTCCCTTATA...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACATATAAGGGACCAAGATaGCTGTATAGAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTYKGPR*LYRRSR
Trigger: TCTTGACCTTCTATACAGCCATCTTGGTCCCTTATA...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACAATCACCTCCCCTGCTaGTCCAACAAAGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYNHLPC*SNKGGM
Trigger: CATACCACCTTTGTTGGACCAGCAGGGGAGGTGATT...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACAAAAACCAATCTTCCCTaGATCACCCATAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: CGQVHGAKRKGERFGSFTKTNLP*ITHKGT
Trigger: AGTGCCTTTATGGGTGATCCAGGGAAGATTGGTTTT...TGTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271751.10
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTCTCAATGTCTGTaGATGGGGCGATGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKASSQCL*MGRCSQ
Trigger: TTGGGAACATCGCCCCATCCACAGACATTGAGAAGA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCACATTCCCGAAGATaGTGGCATAGAGAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKASHSRR*WHREVS
Trigger: GCTCACTTCTCTATGCCACCATCTTCGGGAATGTGA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTAGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCACTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSLTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGCTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GEGASFNIRSVYILIQDLLTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACACATTGGCACAGGACTaGGCAAGGGTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYTLAQD*ARVASF
Trigger: GAAGGAAGCCACCCTTGCCCAGTCCTGTGCCAATGT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGCCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAACTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQLSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGCTGTTTCTCAATATTaGTCATTTTGGCGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQAVSQY*SFWRLR
Trigger: CCTTAAACGCCAAAATGACCAATATTGAGAAACAGC...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCCTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATACTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 4 (lower is better)
Translates to: HQSGTCREFKSSSRGSRILLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGACGTGGCATAGGGGCTTaGATGGCCCATACGCAGTTC +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRRGIGA*MAHTQF
Trigger: GAACTGCGTATGGGCCATCCAAGCCCCTATGCCACG...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTTTGCGTGTCAGTATTTaGGGTCCTGACACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLLRVSI*GPDTSL
Trigger: GAGAGAGGTGTCAGGACCCCAAATACTGACACGCAA...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTAGAAGGGAGAAAGGTTTaGCTCATTTACACAATGTTT +
Preference number: 4 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLEGRKV*LIYTMF
Trigger: AAACATTGTGTAAATGAGCCAAACCTTTCTCCCTTC...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCACCCTTTGTAAGTATATaGGATGGCAGCGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSPFVSI*DGSAHC
Trigger: GCAATGGGCGCTGCCATCCCATATACTTACAAAGGG...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CTGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACTGGAAGGCTGCTAAATaGGCTCAGCTTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: LRSSSWCEKEGRKVWLIYWKAAK*AQLFKY
Trigger: GTATTTAAAAAGCTGAGCCCATTTAGCAGCCTTCCA...GTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAAAAGGGGCTGATGTTTaGCCAACAGCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQKGADV*PTAAHW
Trigger: CCAGTGTGCTGCTGTTGGCCAAACATCAGCCCCTTT...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTATTCCATTTAAGGATTTaGAGAGGAAGCTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLFHLRI*RGSLLN
Trigger: ATTCAGCAAGCTTCCTCTCCAAATCCTTAAATGGAA...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCAAAGAGCTTGACAGTTaGCATAATACTTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFKELDS*HNTSTF
Trigger: GAAGGTAGAAGTATTATGCCAACTGTCAAGCTCTTT...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTATCATTGAACTCCATTTaGCACCCAAAACATGGCATT +
Preference number: 4 (lower is better)
Translates to: RGTLPFPYLFPDRERARLSLNSI*HPKHGI
Trigger: AATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGA...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640710.1
3UTR CAA 72 bp AAGAACATGTCTGGACTTCAAAGCCTTATACCATCTTaGCCCCTCATACCCAGAGGTCTGAGAAATTTCACG +
Preference number: 4 (lower is better)
Translates to: KNMSGLQSLIPS*PLIPRGLRNFT
Trigger: CGTGAAATTTCTCAGACCTCTGGGTATGAGGGGCAAAGATGGTATAAGGCTTTGAAGTCCAGACATGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGGCCAGTCCACTATCTaGGCATTCCCCAACACAAAA +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQGQSTI*AFPNTK
Trigger: TTTTGTGTTGGGGAATGCTCAGATAGTGGACTGGCC...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGCCCCCAGCCTTTACATaGATCATCCTCAATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLPPAFT*IILNWL
Trigger: CAGCCAATTGAGGATGATTCATGTAAAGGCTGGGGG...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSIRWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGAGTGGTGGTGGAATCTaGTCAGCAAAACCAATCTTC +
Preference number: 4 (lower is better)
Translates to: GEGASFNIRSVYILIQDLSGGGI*SAKPIF
Trigger: GAAGATTGGTTTTGCTGATCAGATTCCACCACCACT...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271751.10
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTG +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYTFPLP*ARPIKL
Trigger: CAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTG +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSTFPLP*ARPIKL
Trigger: CAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGCAGGGCATCCCGCTTaGTCACATGCAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSAGHPA*SHADHS
Trigger: ACTGTGATCTGCATGTGATCAAGCGGGATGCCCTGC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACATGGAAGTTAATATCCTaGGTATCTCAGAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CGQVHGAKRKGERFGSFTWKLIS*VSQRAV
Trigger: AACAGCTCTCTGAGATACTCAGGATATTAACTTCCA...TGTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCATGGAAGTTAATATCCTaGGTATCTCAGAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSWKLIS*VSQRAV
Trigger: AACAGCTCTCTGAGATACTCAGGATATTAACTTCCA...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACAAAAATGTCTCTCTCTaGTTCTGGGGACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYKNVSL*FWGLWP
Trigger: AGGCCACAGTCCCCAGAATCAGAGAGAGACATTTTT...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp CACTTACTAGATAATGGTGCCACATATCATGCCCCGACTCCTCAAAGAGGAAAAAGCATAGTATATACATaGGAGGTTCTCGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: HLLDNGATYHAPTPQRGKSIVYT*EVLGTF
Trigger: GAAAGTGCCGAGAACCTCTCATGTATATACTATGCT...TTTTCCTCTTTGAGGAGTCGGGGCATGATATGTGGCACCATTATCTAGTAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAATACAGGAAAACATGGTaGCGTCAGACACGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQYRKTW*RQTRAV
Trigger: TACAGCCCGTGTCTGACGTCACCATGTTTTCCTGTA...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTCACTTGCTACAGTTCTaGGGTTGTGTGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLHLLQF*GCVCLC
Trigger: ACACAGACACACACAACCTCAGAACTGTAGCAAGTG...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GCTGAAGGCCTCACAGCTTTATTCAAAGTCACAGATAGTTGTGACTCGGCCTTAAAGAGAGTACAATCATaGTCCTGCAGTCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: AEGLTALFKVTDSCDSALKRVQS*SCSLFP
Trigger: TGGAAAAAGACTGCAGGATCATGATTGTACTCTCTT...TAAGGCCGAGTCACAACTATCTGTGACTTTGAATAAAGCTGTGAGGCCTTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGGCTCTCAGAAACACTaGATATCTTTGGTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: YKICELLIEQLMDPSDDSGSQKH*ISLVGQ
Trigger: CTGCCCTACCAAAGATATTCAGTGTTTCTGAGAGCC...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCGCTGGCTTCCAGTCATaGGCCCAGTTTGCGCTGATT +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFAGFQS*AQFALI
Trigger: AATCAGCGCAAACTGGGCTCATGACTGGAAGCCAGC...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTTGGACAGTCTCCAACTaGTGCACAAATACAGCATCG +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLWTVSN*CTNTAS
Trigger: CGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCA...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGGCCTCAGCACATTTTaGGAAAGCCTCTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSGLSTF*ESLSEA
Trigger: AGCCTCAGAGAGGCTTTCTCAAAATGTGCTGAGGCC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTCCTGACAGAAAGTaGGACTGCTCACTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKASPDRK*DCSLAY
Trigger: ATAAGCAAGTGAGCAGTCTCACTTTCTGTCAGGAGA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367007.5
ENST00000638498.1
CDS-3UTR TCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTCTCCTGACAGAAAGTaGGACTGCTCACTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASSPDRK*DCSLAY
Trigger: ATAAGCAAGTGAGCAGTCTCACTTTCTGTCAGGAGA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367007.5
ENST00000638498.1
CDS-3UTR GCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACCTGCTGCTTGTCAGTaGTCTTGTCAGCCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALPAACQ*SCQPSK
Trigger: TTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGG...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSAGHPC*LSVLLS
Trigger: TGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSTFSPF*TLGASC
Trigger: GCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACACAGCCAGCTGTTGTTaGGGATTGTCTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GCILQHKISLYPDTRSVNTASCC*GLSWCP
Trigger: AGGACACCAAGACAATCCGCAACAACAGCTGGCTGT...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACACATCATGATGGCCACTaGAAAGATCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTHHDGH*KDLLNV
Trigger: GACATTGAGAAGATCTTTGCAGTGGCCATCATGATG...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATCCTTGGGGCAGATCTaGAGGACCTTCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALSLGQI*RTFSVS
Trigger: TGACACAGAGAAGGTCCTGCAGATCTGCCCCAAGGA...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGTCAACGCTCTCTCCTaGATGGTAGATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSVNALS*MVDEVP
Trigger: GGGGACCTCATCTACCATGCAGGAGAGAGCGTTGAC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGAATTCCAGCACTTTCTaGAGGGCATCCCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLNSSTF*RASRLI
Trigger: GATCAAGCGGGATGCCCTGCAGAAAGTGCTGGAATT...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALSLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGCCTGGCCTCTTTCTaGTGTCGGAATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSSLASF*CRNLWK
Trigger: CTTCCAGAGATTCCGACAGCAGAAAGAGGCCAGGCT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTGGTTGGCGGAGGCATaGTCTGTAAGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSWLAEA*SVRTLP
Trigger: GGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCAAAGACGGTTCAGATaGAGCTGCCACCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSQRRFR*SCHLAG
Trigger: CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR GCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAACTGTCCCTCAAGCTCTaGTTGTCCCGAGCTAGTTAT +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQLSLKL*LSRASY
Trigger: ATAACTAGCTCGGGACAAGCAGAGCTTGAGGGACAG...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAACTGTCCCTCAAGCTCTaGTTGTCCCGAGCTAGTTAT +
Preference number: 4 (lower is better)
Translates to: KSSSRGSRISLICLHENELSLKL*LSRASY
Trigger: ATAACTAGCTCGGGACAAGCAGAGCTTGAGGGACAG...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCTGTCTATGGGAGGCATaGACCACACCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFCLWEA*TTPAAA
Trigger: AGCAGCTGCAGGTGTGGTGCATGCCTCCCATAGACA...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAATCAATGGAAGGGCCTaGACGTTCCTCTTAACATTC +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSINGRA*TFLLTF
Trigger: GAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGAT...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCCTGTTCGTTTCGAATTaGAGCAATTTTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAALFVSN*SNFHKE
Trigger: TTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAG...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCCTGTTCGTTTCGAATTaGAGCAATTTTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCLFVSN*SNFHKE
Trigger: TTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAG...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTCCCCTCCAGTGGTGGTaGAATCTGATCAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSPLQWW*NLISKT
Trigger: GGTTTTGCTGATCAGATTCCACCACCACTGGAGGGG...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000638498.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCTCTCTCCCCTCCAGTaGTGGTGGAATCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSLSPLQ*WWNLIS
Trigger: GCTGATCAGATTCCACCACCACTGGAGGGGAGAGAG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638498.1
CDS-3UTR CCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTATGTCCATCGCTAGTTaGTACAGCCAGCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLMSIAS*YSQLLL
Trigger: CAACAACAGCTGGCTGTACCAACTAGCGATGGACAT...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTTCTTCTCAATGTCTGTaGATGGGGCGATGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSSSQCL*MGRCSQ
Trigger: TTGGGAACATCGCCCCATCCACAGACATTGAGAAGA...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTCAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGACATTGGCACAGGACTaGGCAAGGGTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRTLAQD*ARVASF
Trigger: GAAGGAAGCCACCCTTGCCCAGTCCTGTGCCAATGT...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCACATTGGCACAGGACTaGGCAAGGGTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSTLAQD*ARVASF
Trigger: GAAGGAAGCCACCCTTGCCCAGTCCTGTGCCAATGT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACCATCGACTCAGCCTTaGACACCTTGTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALPSTQP*TPCSSP
Trigger: AGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGG...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTCTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSLSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACCTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYLSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAGCTGTTTCTCAATATTaGTCATTTTGGCGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVAVSQY*SFWRLR
Trigger: CCTTAAACGCCAAAATGACCAATATTGAGAAACAGC...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TCCACTGTGCCTGGAAGAGACTTCACTCCTTTCCTTTCTCAGATGCCATTGAGACTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 4 (lower is better)
Translates to: STVPGRDFTPFLSQMPLRLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...TCTCAATGGCATCTGAGAAAGGAAAGGAGTGAAGTCTCTTCCAGGCACAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACCTTACAGAGAGCTaGAAACTCACTGCTTCATTC +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLHLTES*KLTASF
Trigger: GAATGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTG...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAACAGAGGTACCAGGAATaGGGTCACCGTCTAACACAG +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLEQRYQE*GHRLTQ
Trigger: CTGTGTTAGACGGTGACCCCATTCCTGGTACCTCTG...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACATACAGTGGTGTTCTTaGCAGCATCCTCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: GCILQHKISLYPDTRSVNIQWCS*QHPQLT
Trigger: GGTCAGCTGAGGATGCTGCCAAGAACACCACTGTAT...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTGCACAGGAGCTCCTTTaGGGAAGGAGACCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: KEKENPIKDLAGLNGKSIAQELL*GRRPED
Trigger: ATCCTCAGGTCTCCTTCCCCAAAGGAGCTCCTGTGC...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638960.1
3UTR CAA 72 bp TTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTaGGCAGCATCCTCAGCTGACCACAAAAATAGTATC +
Preference number: 4 (lower is better)
Translates to: LTFPSHRYTVVF*AASSADHKNSI
Trigger: GATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR TCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGGCCAGTCCACTATCTaGGCATTCCCCAACACAAAA +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALGQSTI*AFPNTK
Trigger: TTTTGTGTTGGGGAATGCTCAGATAGTGGACTGGCC...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACCCCCAGCCTTTACATaGATCATCCTCAATTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALPPAFT*IILNWL
Trigger: CAGCCAATTGAGGATGATTCATGTAAAGGCTGGGGG...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACCACGTTTCACATCGCTaGTCTTCCGGAACACAATCC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYHVSHR*SSGTQS
Trigger: GGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCTGGCGTTTAAGGCCTTaGTGTCCTCCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFWRLRP*CPPSAR
Trigger: ACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCA...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGGAGACAGAAAGTTTCTaGGCTCTACCCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRETESF*ALPSCP
Trigger: GGGACAGGAGGGTAGAGCTCAGAAACTTTCTGTCTC...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAAATGACCCCGTGCGGTaGACAAAATACAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRNDPVR*TKYKGL
Trigger: CAGACCTTTGTATTTTGTTCACCGCACGGGGTCATT...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTCCATTCCCTCCAAGTTaGCTTTTCAGAGCTGAACTT +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLPFPPS*LFRAEL
Trigger: AAGTTCAGCTCTGAAAAGTCAACTTGGAGGGAATGG...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCAAGTGAAAGAGGCTaGAGGCCTCACAGCTTTATT +
Preference number: 4 (lower is better)
Translates to: LFKNVEKGISSMEGPARSSSERG*RPHSFI
Trigger: AATAAAGCTGTGAGGCCTTCAGCCTCTTTCACTTGA...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTTCCTTGAGGTGTCGGTaGAATGTCGGATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: KEKENPIKDLAGLNGKSISLRCR*NVGCGQ
Trigger: CTGTCCACATCCGACATTTCACCGACACCTCAAGGA...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGTCTTTGGTGCCTCTTaGTTGTACTGGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYVFGAS*LYWGRM
Trigger: CATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGAC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGAAATCACCTCCCCTaGTGGTCCAACAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSRNHLP*WSNKGG
Trigger: ACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTCT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTCTCATAGTCCCCAATaGTGTACCAGATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSSHSPQ*CTRCRP
Trigger: TGGCCTGCATCTGGTACAGCATTGGGGACTATGAGA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAACAGCCAGCTGTTGTTaGGGATTGTCTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLETASCC*GLSWCP
Trigger: AGGACACCAAGACAATCCGCAACAACAGCTGGCTGT...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACAGCCAGCTGTTGTTaGGGATTGTCTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSTASCC*GLSWCP
Trigger: AGGACACCAAGACAATCCGCAACAACAGCTGGCTGT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTCATCATGATGGCCACTaGAAAGATCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASHHDGH*KDLLNV
Trigger: GACATTGAGAAGATCTTTGCAGTGGCCATCATGATG...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAACTGTCCCTCAAGCTCTaGTTGTCCCGAGCTAGTTAT +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLELSLKL*LSRASY
Trigger: ATAACTAGCTCGGGACAAGCAGAGCTTGAGGGACAG...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATGTGTGTCTGTGTGTCTaGTTTGTTAATAAAGCAACT +
Preference number: 4 (lower is better)
Translates to: QWCSWQHPQLTTKIVSAHVCLCV*FVNKAT
Trigger: AGTTGCTTTATTAACAAAGCAGACACACAGACACAC...ATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGCCTATAATGACCCCGTaGGGTGAACAAAATACAAAG +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRPIMTP*GEQNTK
Trigger: CTTTGTATTTTGTTCACCGCACGGGGTCATTATAGG...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTGAGCTGGAAACTCACTaGTTCATTCTCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLELETH*FILFPA
Trigger: AGCTGGAAAGAGAATGAAGCAGTGAGTTTCCAGCTC...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACAAAATTTCCCAGAGTATaGATGGGAGACATAGTGGTC +
Preference number: 4 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTKFPRV*MGDIVV
Trigger: GACCACTATGTCTCCCATGCATACTCTGGGAAATTT...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTAACCTATTAATCAAATaGACATCAGCAACGTGTATC +
Preference number: 4 (lower is better)
Translates to: QSGTCREFKSSSRGSRISNLLIK*TSATCI
Trigger: GATACACGTTGCTGATGTGCATTTGATTAATAGGTT...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACACTGTTCGTTTCGAATTaGAGCAATTTTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTLFVSN*SNFHKE
Trigger: TTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAG...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCAGGCGGGAGTGCTTGTaGACATTCTCGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFRRECL*TFSPFC
Trigger: GCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCT...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGGTGAGGGGGAGTCTTTaGTGCCTCTTGCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRVRGSL*CLLLVL
Trigger: CAGTACAAGCAAGAGGCACCAAAGACTCCCCCTCAC...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGATGTCCATCGCTAGTTaGTACAGCCAGCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLMSIAS*YSQLLL
Trigger: CAACAACAGCTGGCTGTACCAACTAGCGATGGACAT...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAAGACAGAATTCTTGCTaGGACCACCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALRQNSC*DHLPTS
Trigger: GGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGCTCAATGTCTGTGGATaGGGCGATGTTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRLNVCG*GDVPKA
Trigger: GGCTTTGGGAACATCGCCCCATCCACAGACATTGAG...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGACATTCCCGAAGATGGTaGCATAGAGAAGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: IRGGCILQHKISLYPDTRHSRRW*HREVSQ
Trigger: TTGGCTCACTTCTCTATGCCACCATCTTCGGGAATG...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTCACATTCCCGAAGATaGTGGCATAGAGAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLSHSRR*WHREVS
Trigger: GCTCACTTCTCTATGCCACCATCTTCGGGAATGTGA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp CTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LIEQLMDPSDDSEVTDKGGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...CCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCAGGACTGGGCAAGGGTaGCTTCCTTCCAGAACACAT +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSRTGQG*LPSRTH
Trigger: ATGTGTTCTGGAAGGAAGCCACCCTTGCCCAGTCCT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCAGGACTGGGCAAGGGTaGCTTCCTTCCAGAACACAT +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFRTGQG*LPSRTH
Trigger: ATGTGTTCTGGAAGGAAGCCACCCTTGCCCAGTCCT...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGCTGTCTTCTTCAGTGTaGCCTCGCCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRLSSSV*PRLTLL
Trigger: CAAAAGCGTCAGGCGAGGCCACACTGAAGAAGACAG...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGTGCGCTGTTTCTCAATATTaGTCATTTTGGCGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SILVILAFKALMSSFSSCAVSQY*SFWRLR
Trigger: CCTTAAACGCCAAAATGACCAATATTGAGAAACAGC...GCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR CCA 90 bp TCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGTGCCTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 4 (lower is better)
Translates to: SILVILAFKALMSSFSSCLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...GCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAAGCTTCAAGTGTCTATaGGAGGCATGCACCACACCT +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLESFKCL*EACTTP
Trigger: AGGTGTGGTGCATGCCTCCCATAGACACTTGAAGCT...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACATCATTGAACTCCATTTaGCACCCAAAACATGGCATT +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTSLNSI*HPKHGI
Trigger: AATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGA...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR CAA 72 bp AATATCCTGAGTATCTCAGAGAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NILSISESCFSI*VILAFKALMSS
Trigger: GGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAAACAGCTCTCTGAGATACTCAGGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYRSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAAGGTCAAGATCAAGATaGTCCAATCCCACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALRSRSR*SNPTWS
Trigger: AGACCACGTGGGATTGGATCATCTTGATCTTGACCT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSRWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKARWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGTGAGCCAATCATCATaGTGGCCACTGCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSVSQSS*WPLQRS
Trigger: AGATCTTTGCAGTGGCCATCATGATGATTGGCTCAC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCACGTTTCACATCGCTaGTCTTCCGGAACACAATCC +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSHVSHR*SSGTQS
Trigger: GGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAAGCATAGTATATACATaGGAGGTTCTCGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: YKICELLIEQLMDPSDDSSIVYT*EVLGTF
Trigger: GAAAGTGCCGAGAACCTCTCATGTATATACTATGCT...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAAGCATAGTATATACATaGGAGGTTCTCGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSSIVYT*EVLGTF
Trigger: GAAAGTGCCGAGAACCTCTCATGTATATACTATGCT...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR TCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAATCTCTTTCCAGCTCCTaGAGAGAGTACAATCATGAT +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSESLSSS*REYNHD
Trigger: ATCATGATTGTACTCTCTTCAGGAGCTGGAAAGAGA...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGCTCATTTGGACAAAGTaGCAGATGCAAAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRLIWTK*QMQRKK
Trigger: CTTTTTCCTTTGCATCTGTCACTTTGTCCAAATGAG...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGCTCATTTGGACAAAGTaGCAGATGCAAAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GEGASFNIRSVYILIQDLLIWTK*QMQRKK
Trigger: CTTTTTCCTTTGCATCTGTCACTTTGTCCAAATGAG...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTGTAGACAGAATTCTTaGTGGGACCACCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYCRQNS*WDHLPT
Trigger: AGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCTACA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTGTAGACAGAATTCTTaGTGGGACCACCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSCRQNS*WDHLPT
Trigger: AGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCTACA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCACATTGACCGTTGGGTaGCAGACAAGAAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFTLTVG*QTRSLS
Trigger: TGACAGGCTTCTTGTCTGGCACCCAACGGTCAATGT...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTATAAGGGACCAAGATaGCTGTATAGAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: NMRSQSMILLASAHFEKAYKGPR*LYRRSR
Trigger: TCTTGACCTTCTATACAGCCATCTTGGTCCCTTATA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTATAAGGGACCAAGATaGCTGTATAGAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRYKGPR*LYRRSR
Trigger: TCTTGACCTTCTATACAGCCATCTTGGTCCCTTATA...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTATAAGGGACCAAGATaGCTGTATAGAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASYKGPR*LYRRSR
Trigger: TCTTGACCTTCTATACAGCCATCTTGGTCCCTTATA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCAATCACCTCCCCTGCTaGTCCAACAAAGGTGGTATG +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSNHLPC*SNKGGM
Trigger: CATACCACCTTTGTTGGACCAGCAGGGGAGGTGATT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLCCGLS*CPRQRS
Trigger: AGATCTTTGACGAGGACACCAAGACAATCCGCAACA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAAATGTCCATCGCTAGTTaGTACAGCCAGCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLEMSIAS*YSQLLL
Trigger: CAACAACAGCTGGCTGTACCAACTAGCGATGGACAT...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCTTCTCAATGTCTGTaGATGGGGCGATGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYSSQCL*MGRCSQ
Trigger: TTGGGAACATCGCCCCATCCACAGACATTGAGAAGA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CCA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACCTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYLTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AGAATACATTCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RIHSLGEGASFNIRSVYILTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...GATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGAATGTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AAAATTTCCCAGAGTATGCATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAAGCTGTTTCTCAATATTaGTCATTTTGGCGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: KISQSMHGRHSGQCNKGKAVSQY*SFWRLR
Trigger: CCTTAAACGCCAAAATGACCAATATTGAGAAACAGC...TTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACAAACACCACCTCATTGACCATCTTAGTTCTTAGAGTTAACCTTAAACCCACCAATAGACCTCTCAGCTaGCTCCAAAAATGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TNTTSLTILVLRVNLKPTNRPLS*LQKCLS
Trigger: AGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT...GGTGGGTTTAAGGTTAACTCTAAGAACTAAGATGGTCAATGAGGTGGTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAATAGACCTCTCAGCTaGCTCCAAAAATGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLNRPLS*LQKCLS
Trigger: AGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: YKICELLIEQLMDPSDDSKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTAAATTGTTGGTCATGTaGACATATGTGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLKLLVM*TYVVGV
Trigger: CACCCCTACCACATATGTCCACATGACCAACAATTT...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTCTCTTACCCAAGGACTaGTTGGCAGCTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: KEKENPIKDLAGLNGKSILLPKD*LAASQV
Trigger: CACTTGAGAAGCTGCCAACCAGTCCTTGGGTAAGAG...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACCCCCAAGAACATGTCTaGACTTCAAAGCCTTATACC +
Preference number: 4 (lower is better)
Translates to: GCILQHKISLYPDTRSVNPQEHV*TSKPYT
Trigger: GGTATAAGGCTTTGAAGTCCAGACATGTTCTTGGGG...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AAAATTTCCCAGAGTATGCATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAAGAAGGGAGAAAGGTTTaGCTCATTTACACAATGTTT +
Preference number: 4 (lower is better)
Translates to: KISQSMHGRHSGQCNKGKEGRKV*LIYTMF
Trigger: AAACATTGTGTAAATGAGCCAAACCTTTCTCCCTTC...TTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATACTGCGGTCAAGTTCATaGTGCGAAAAGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINILRSSS*CEKEGR
Trigger: TCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATATATTCTCTGGGAAATaGAGCTTCAATATGAATGAC +
Preference number: 4 (lower is better)
Translates to: IINGRACTFLLTFPSHRYIFSGK*SFNMND
Trigger: GTCATTCATATTGAAGCTCCATTTCCCAGAGAATAT...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCTGTAAGTATATGGGATaGCAGCGCCCATTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFCKYMG*QRPLLE
Trigger: CTCCAGCAATGGGCGCTGCCATCCCATATACTTACA...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAACAGCTCTATCACAGCTaGAGTTCCATTCAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RGSRISLICLHENEVSLEQLYHS*SSIQGS
Trigger: AGACCCTTGAATGGAACTCCAGCTGTGATAGAGCTG...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAATACAGTGGTGTTCTTaGCAGCATCCTCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRIQWCS*QHPQLT
Trigger: GGTCAGCTGAGGATGCTGCCAAGAACACCACTGTAT...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTTGGCACCCAAAACATaGCATTCATTACTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: MRSQSMILLASAHFEKASLAPKT*HSLLSS
Trigger: AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSRWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACAGTGGTGGTGGAATCTaGTCAGCAAAACCAATCTTC +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYSGGGI*SAKPIF
Trigger: GAAGATTGGTTTTGCTGATCAGATTCCACCACCACT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638498.1
CDS-3UTR TCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCAAAAATGTCTCTCTCTaGTTCTGGGGACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFKNVSL*FWGLWP
Trigger: AGGCCACAGTCCCCAGAATCAGAGAGAGACATTTTT...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR TCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAAATGACCCCGTGCGGTaGACAAAATACAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRNDPVR*TKYKGL
Trigger: CAGACCTTTGTATTTTGTTCACCGCACGGGGTCATT...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACCTCATTTGGACAAAGTaGCAGATGCAAAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYLIWTK*QMQRKK
Trigger: CTTTTTCCTTTGCATCTGTCACTTTGTCCAAATGAG...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR GCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTGTAGACAGAATTCTTaGTGGGACCACCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSCRQNS*WDHLPT
Trigger: AGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCTACA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR GCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTATATAAACATAGCACTTaGTACAGTTCTGAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLYKHST*YSSEVV
Trigger: CACAACCTCAGAACTGTAGCAAGTGCTATGTTTATA...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAATTCATTAGGGGAGGGTaGATCCTTCAACATAAGATC +
Preference number: 4 (lower is better)
Translates to: SLGEGASFNIRSVYILIQFIRGG*ILQHKI
Trigger: GATCTTATGTTGAAGGATGCACCCTCCCCTAATGAA...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CCA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACACTGTTCGTTTCGAATTaGAGCAATTTTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTLFVSN*SNFHKE
Trigger: TTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAG...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCT +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALCCGLS*CPRQRS
Trigger: AGATCTTTGACGAGGACACCAAGACAATCCGCAACA...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATACATTCCCGAAGATGGTaGCATAGAGAAGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINIHSRRW*HREVSQ
Trigger: TTGGCTCACTTCTCTATGCCACCATCTTCGGGAATG...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCATTCCCGAAGATGGTaGCATAGAGAAGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSHSRRW*HREVSQ
Trigger: TTGGCTCACTTCTCTATGCCACCATCTTCGGGAATG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATACTCACTCAATCCTTTTaGCACCTGGTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINILTQSF*HLVELQ
Trigger: CTGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAG...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACCAATGCCTCTGGACATaGACCAAGTGGACACAATAT +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYQCLWT*TKWTQY
Trigger: ATATTGTGTCCACTTGGTCCATGTCCAGAGGCATTG...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGAAAAAAGTGTCTCCAGTaGCAGGTTCTTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRKKCLQ*QVLLRL
Trigger: CAGCCTCAGAAGAACCTGCCACTGGAGACACTTTTT...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTAGAAAAACATACATCCTaGGCAAATCTGTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLEKHTS*ANLFSL
Trigger: AAGAGAGAACAGATTTGCCCAGGATGTATGTTTTTC...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTGGTTTCTCAACCAAATaGTCGTCTCTGTTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: KEKENPIKDLAGLNGKSIGFSTK*SSLFPS
Trigger: GGACGGAAACAGAGACGACCATTTGGTTGAGAAACC...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTCGAGCTAGTTATAAATaGCAACTACAGGAAAACATG +
Preference number: 4 (lower is better)
Translates to: FLAASSADHKNSISSFTLRASYK*QLQENM
Trigger: CATGTTTTCCTGTAGTTGTCATTTATAACTAGCTCG...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AAATTAGACTTCCTCTTACTTGTATGCCGCCATCTGAGGCTAAATCTAATTATGTCTCTTTCCAGCTCCTaGAGAGAGTACAATCATGAT +
Preference number: 4 (lower is better)
Translates to: KLDFLLLVCRHLRLNLIMSLSSS*REYNHD
Trigger: ATCATGATTGTACTCTCTTCAGGAGCTGGAAAGAGA...CATAATTAGATTTAGCCTCAGATGGCGGCATACAAGTAAGAGGAAGTCTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTTTGGCATACTTTTTCTaGAGTCTAAATGTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLLAYFF*SLNVLS
Trigger: GGACAGAACATTTAGACTTCAGAAAAAGTATGCCAA...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAATTGGCATACTTTTTCTaGAGTCTAAATGTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSELAYFF*SLNVLS
Trigger: GGACAGAACATTTAGACTTCAGAAAAAGTATGCCAA...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGGCGCTGATTCACGAGTaGATTCCTAAAGCTACATTC +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRALIHE*IPKATF
Trigger: GAATGTAGCTTTAGGAATGCACTCGTGAATCAGCGC...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACAAAACCAATCTTCCCTaGATCACCCATAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYKTNLP*ITHKGT
Trigger: AGTGCCTTTATGGGTGATCCAGGGAAGATTGGTTTT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638498.1
CDS-3UTR CCA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCAGCTGTTTCTCAATATTaGTCATTTTGGCGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGAAVSQY*SFWRLR
Trigger: CCTTAAACGCCAAAATGACCAATATTGAGAAACAGC...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAATAGACCTCTCAGCTaGCTCCAAAAATGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSNRPLS*LQKCLS
Trigger: AGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR CCA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCAGAAAAACATACATCCTaGGCAAATCTGTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGAEKHTS*ANLFSL
Trigger: AAGAGAGAACAGATTTGCCCAGGATGTATGTTTTTC...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACACAGTCCCCAGGGATTaGATAACAAGAAGAAATCAA +
Preference number: 4 (lower is better)
Translates to: GCILQHKISLYPDTRSVNTVPRD*ITRRNQ
Trigger: TTGATTTCTTCTTGTTATCCAATCCCTGGGGACTGT...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACTTCCATTTAAGGATTTaGAGAGGAAGCTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: VDSLQLMHKYSIGILREYFHLRI*RGSLLN
Trigger: ATTCAGCAAGCTTCCTCTCCAAATCCTTAAATGGAA...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTAAAGAGCTTGACAGTTaGCATAATACTTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: RGGCILQHKISLYPDTRSKELDS*HNTSTF
Trigger: GAAGGTAGAAGTATTATGCCAACTGTCAAGCTCTTT...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALRWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACAGGTGGTATGAAAATTaGGCACAATGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYRWYEN*AQCPPK
Trigger: TTTTGGTGGACATTGTGCTCAATTTTCATACCACCT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR TCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGCATAGTATATACATaGGAGGTTCTCGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRSIVYT*EVLGTF
Trigger: GAAAGTGCCGAGAACCTCTCATGTATATACTATGCT...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR GCA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCCATCATGATGGCCACTaGAAAGATCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: CILQHKISLYPDTRSVNFHHDGH*KDLLNV
Trigger: GACATTGAGAAGATCTTTGCAGTGGCCATCATGATG...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR GCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACCTTCTTCCAAAATTGTaGAAAGACGGTTCAGATGCA +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYLLPKL*KDGSDA
Trigger: TGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAG...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR GCA 90 bp AACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGAGACAAAATACAAAGGTCTaGAGGGCAATCCCAATGAGA +
Preference number: 4 (lower is better)
Translates to: NPIKDLAGLNGKSINIRRQNTKV*RAIPMR
Trigger: TCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTG...TCTCCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR GCA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCAACCTATTAATCAAATaGACATCAGCAACGTGTATC +
Preference number: 4 (lower is better)
Translates to: LFKNVEKGISSMEGPARSNLLIK*TSATCI
Trigger: GATACACGTTGCTGATGTGCATTTGATTAATAGGTT...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTATAAGGGACCAAGATaGCTGTATAGAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYYKGPR*LYRRSR
Trigger: TCTTGACCTTCTATACAGCCATCTTGGTCCCTTATA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGCTACTTGAAAATTGTTaGTCATGTGGACATATGTGG +
Preference number: 4 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLLLENC*SCGHMW
Trigger: CCACATATGTCCACATGACCAACAATTTTCAAGTAG...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR CCA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAATATTCTCTGGGAAATaGAGCTTCAATATGAATGAC +
Preference number: 4 (lower is better)
Translates to: KICELLIEQLMDPSDDSEIFSGK*SFNMND
Trigger: GTCATTCATATTGAAGCTCCATTTCCCAGAGAATAT...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTTGGCACCCAAAACATaGCATTCATTACTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSLAPKT*HSLLSS
Trigger: AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTCATTGAACTCCATTTaGCACCCAAAACATGGCATT +
Preference number: 4 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSSLNSI*HPKHGI
Trigger: AATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
3UTR CAA 72 bp AATGCAATGAGTTGCATTAATTGTACACTAGACAATTaGGTTTCTCAACCAAATGGTCGTCTCTGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: NAMSCINCTLDN*VSQPNGRLCFR
Trigger: ACGGAAACAGAGACGACCATTTGGTTGAGAAACCAAATTGTCTAGTGTACAATTAATGCAACTCATTGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR TCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGCAGGGCAATCCCAATaGGAATCAAAGTATAAACAT +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINIAGQSQ*ESKYKH
Trigger: ATGTTTATACTTTGATTCTCATTGGGATTGCCCTGC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR TCA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAAGAGAGTACAATCATaGTCCTGCAGTCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KEKENPIKDLAGLNGKSIKRVQS*SCSLFP
Trigger: TGGAAAAAGACTGCAGGATCATGATTGTACTCTCTT...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CCA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGGTATCTGTTGGTGTTaGCATACATCTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TKYKGLQGNPNENQSINIGICWC*HTSVGK
Trigger: TTTTCCAACAGATGTATGCCAACACCAACAGATACC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CCA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTTGGCACCCAAAACATaGCATTCATTACTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSLAPKT*HSLLSS
Trigger: AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACCTGTTCGTTTCGAATTaGAGCAATTTTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYLFVSN*SNFHKE
Trigger: TTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAG...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CCA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGCTGTTCGTTTCGAATTaGAGCAATTTTCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRLFVSN*SNFHKE
Trigger: TTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAG...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS CCA 90 bp GGTCCGGCGGGCGTCCTGGCGCGGCTTCTTACGACAGCAGGAAACTaGCCTCGGGGCCCGCACGCAGTCCCGGCTCGAAGCGCCCCATGC +
Preference number: 5 (lower is better)
Translates to: GPAGVLARLLTTAGN*PRGPHAVPARSAPC
Trigger: GCATGGGGCGCTTCGAGCCGGGACTGCGTGCGGGCCCCGAGGCCAGTTTCCTGCTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
CDS CCA 90 bp CAGCCATGGTCATCCTCCCAGCAGCTCGGGGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAGCAGGAAACTGGCCTCGGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: QPWSSSQQLGVRRAS*RGFLRQQETGLGAR
Trigger: GCGGGCCCCGAGGCCAGTTTCCTGCTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGACCCCGAGCTGCTGGGAGGATGACCATGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS-3UTR CAA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGCGCCTTTTTGCACGCTaGGAGCCAGCTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: NSMASARRQPSLASRKAGRLFAR*EPAAAG
Trigger: TCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCG...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGTCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp TGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: WKDTGVAGLSRTVTTLAFAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...GAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAAGGACACCCCTGCTGCTaGTCAGTGCTCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: QCPEAAITGQPEGRVLLEGHPCC*SVLLSA
Trigger: GGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCC...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGATGCCGGGAAGTCCTaGGCCCACTGCAGTCCATGG +
Preference number: 5 (lower is better)
Translates to: GCLEGYGRGRTLTHGDHADAGKS*AHCSPW
Trigger: CCATGGACTGCAGTGGGCCAAGGACTTCCCGGCATC...AGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CAA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPDILAF*HAWSQL
Trigger: CAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTC...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAAGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: QCPEAAITGQPEGRVLLEARREC*WTFSPF
Trigger: AAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp TCGGAATCTCTGGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGTCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: SESLEEAPDRVVRGQDQGSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...CCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGTGCAGGGCATCCCGCTaGATCACATGCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPCRASR*ITCRSQ
Trigger: CTGTGATCTGCATGTGATCAAGCGGGATGCCCTGCA...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp CTTGACCTCTGCCAGGATGGGACTCCGATCCTGGGGACTCCTGGCCTCACCCACAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: LDLCQDGTPILGTPGLTHKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...GTGGGTGAGGCCAGGAGTCCCCAGGATCGGAGTCCCATCCTGGCAGAGGTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CCGGAGGTGGAGGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: PEVEAAWKDTGVAGLSRTRRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...CGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAAAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: QCPEAAITGQPEGRVLLERRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTTGTCAGTGCTCTaGTCAGCCGAGCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: NSMASARRQPSLASRKAGCLSVL*SAEQTS
Trigger: GGAAGTTTGCTCGGCTGACAAGAGCACTGACAAGCA...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCGGACACCCCTGCTGCTaGTCAGTGCTCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVGHPCC*SVLLSA
Trigger: GGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCC...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGTGTGAGGGGGAGTCTTaGGTGCCTCTTGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPCEGES*VPLACT
Trigger: AGTACAAGCAAGAGGCACCAAAGACTCCCCCTCACA...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGTGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQCSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GCAGTGAAGTGTCCCCGAGCATCGTGGCATAGGGGCTTGGATGGCCCATACGCACTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: AVKCPRASWHRGLDGPYALASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...TGCGTATGGGCCATCCAAGCCCCTATGCCACGATGCTCGGGGACACTTCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGCTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: DLKGPSPALTLASPPLGKLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp AGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGACTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: REGTHQSGTCREFKSSSRLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...TCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: DLKGPSPALTLASPPLGKAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp CTTCCCGCAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: LPASIFEAGPAFALGTIALASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...GGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CCGGAGGTGGAGGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGTTGGCGTTTAAGGCCTaGATGTCCTCCTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PEVEAAWKDTGVAGLSRTLAFKA*MSSFSS
Trigger: CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAA...CGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRDILAF*HAWSQL
Trigger: CAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTC...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp TTCAGCTCGTGCCTCACCTCCAGGACTGTGGCCTGCAGCGTCTGCTCAGGGATGGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: FSSCLTSRTVACSVCSGMARREC*WTFSPF
Trigger: AAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC...CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGAGGTGAGGCACGAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAAGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: QCPEAAITGQPEGRVLLEAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp TGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCTCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: WKDTGVAGLSRTVTTLAFSIDSA*DTLFQS
Trigger: GGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGA...GAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CCGGAGGTGGAGGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGTTGTTGCGGATTGTCTaGGTGTCCTCGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: PEVEAAWKDTGVAGLSRTLLRIV*VSSSKI
Trigger: GATCTTTGACGAGGACACCAAGACAATCCGCAACAA...CGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CAA 90 bp TCGGAATCTCTGGAAGAGGCGCCGGACAGGGTGGTCCGGGGGCAAGATCAGGGGAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAA +
Preference number: 5 (lower is better)
Translates to: SESLEEAPDRVVRGQDQGSCCCG*SWCPRQ
Trigger: TTGACGAGGACACCAAGACAATCCGCAACAACAGCT...CCCCTGATCTTGCCCCCGGACCACCCTGTCCGGCGCCTCTTCCAGAGATTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CAA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCTGGTACAGCCAGCTGTaGTTGCGGATTGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVWYSQL*LRIVLV
Trigger: CACCAAGACAATCCGCAACAACAGCTGGCTGTACCA...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTGGTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: LSTVPEEQAMGCTAENPWFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACCTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: QASLKRAQLLRLAQSPPPFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp GACACGGGCTGTACAAGGACGGGGATGCCGGGAAGTCCTTGGCCCACTGCAGTCTTGGCGTTTAAGGCCTaGATGTCCTCCTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: DTGCTRTGMPGSPWPTAVLAFKA*MSSFSS
Trigger: CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAA...GACTGCAGTGGGCCAAGGACTTCCCGGCATCCCCGTCCTTGTACAGCCCGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CCGGAGGTGGAGGCTGCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGCTGAACTTCTAACCTaGCGTGTCAGTATTTGGGGT +
Preference number: 5 (lower is better)
Translates to: PEVEAAWKDTGVAGLSRTAELLT*RVSIWG
Trigger: ACCCCAAATACTGACACGCAAGGTTAGAAGTTCAGC...CGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGCAGCCTCCACCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CAA 90 bp AACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTCCTCAATTGGCTGTTaGAAAGCTGTTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: NSMASARRQPSLASRKAGSSIGC*KAVMSL
Trigger: CAGTGACATAACAGCTTTCAAACAGCCAATTGAGGA...CCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGAGTCTTTGGTGCCTCTaGCTTGTACTGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRSLWCL*LVLGKD
Trigger: ATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGACT...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGTTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: ASRKAGCSLNTLRFRCTQFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp TTCAGCTCGTGCCTCACCTCCAGGACTGTGGCCTGCAGCGTCTGCTCAGGGATGTACAGCCAGCTGTTGTaGCGGATTGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: FSSCLTSRTVACSVCSGMYSQLL*RIVLVS
Trigger: GGACACCAAGACAATCCGCAACAACAGCTGGCTGTA...CATCCCTGAGCAGACGCTGCAGGCCACAGTCCTGGAGGTGAGGCACGAGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CAA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: EPLDLKGPSPALTLASPPCSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CTTCCCGCAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: LPASIFEAGPAFALGTIAFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...GGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACACTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS GCA 90 bp TGCTTGTGGACATTCTCGCCTTTTTGCACGCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTTGTCAGTGCTCTTGTCAGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: CLWTFSPFCTLGASC*RTPLLLVSALVSRA
Trigger: TGCTCGGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000624583.2
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS GCA 90 bp GAGTGCTTGTGGACATTCTCGCCTTTTTGCACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTGCTTGTCAGTGCTCTTGTCAGCCGA +
Preference number: 5 (lower is better)
Translates to: ECLWTFSPFCTLGAS*CRTPLLLVSALVSR
Trigger: TCGGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000624583.2
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS-3UTR CAA 90 bp CAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAATTGCAAAATCCATCATaGCTGTACACAATAGGCCAG +
Preference number: 5 (lower is better)
Translates to: QCPEAAITGQPEGRVLLELQNPS*LYTIGQ
Trigger: CTGGCCTATTGTGTACAGCAATGATGGATTTTGCAA...TTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GGAACTCCATGGCCAGTGCCCGGAGGCAGCCATCACTGGCCAGCCGGAAGGCCGCCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: GTPWPVPGGSHHWPAGRPPVRFE*EQFSQR
Trigger: TCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGG...CGGCCTTCCGGCTGGCCAGTGATGGCTGCCTCCGGGCACTGGCCATGGAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCTTTGGTGCCTCTTGCTaGTACTGGGGAAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVFGASC*YWGRMS
Trigger: AGACATCCTTCCCCAGTACAAGCAAGAGGCACCAAA...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp CTGGCCTCACCCACGTTGTCCAGGCGCAAGTCGCTCTTGGTGATGCCACTGTCATGTGAGGGGGAGTCTTaGGTGCCTCTTGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: LASPTLSRRKSLLVMPLSCEGES*VPLACT
Trigger: AGTACAAGCAAGAGGCACCAAAGACTCCCCCTCACA...TGACAGTGGCATCACCAAGAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp TGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCTTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: WKDTGVAGLSRTVTTLAFFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...GAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCCCCGCCCGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: QASLKRAQLLRLAQSPPPAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: EPLDLKGPSPALTLASPPFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGCTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGLASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACACTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTLASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTTGGCGTTTAAGGCCTaGATGTCCTCCTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFLAFKA*MSSFSS
Trigger: CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAA...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGGGAGCAGGCTATGGGTaGCACCGCAGAGAACCCCTG +
Preference number: 5 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQGAGYG*HRREPL
Trigger: CAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCC...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCTTCACGAGGCTGTGGCCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: GVAGLSRTVTTLAFTRLWPVRFE*EQFSQR
Trigger: TCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGG...CCACAGCCTCGTGAAGGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGGACACCCCTGCTGCTaGTCAGTGCTCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSGHPCC*SVLLSA
Trigger: GGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCC...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGCGCCTTTTTGCACGCTaGGAGCCAGCTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQRLFAR*EPAAAG
Trigger: TCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCG...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGCCGCCTTTTTGCACGCTaGGAGCCAGCTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: QVALGDATVTRVCLLQCGRLFAR*EPAAAG
Trigger: TCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCG...GCCACACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGDILAF*HAWSQL
Trigger: CAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTC...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTGGTGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 5 (lower is better)
Translates to: LSTVPEEQAMGCTAENPWCSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTAGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: RGTLPFPYLFPDRERARLAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATGGGTTGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTATCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: MGCTAENPWILRAPLQLLSIDSA*DTLFQS
Trigger: GGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGA...TAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGSIDSA*DTLFQS
Trigger: GGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGA...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDRRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCACTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: SKATSLHHLTESWKLTASLASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp TCTCGGGAAGTGTCTCCATCGACTCAGCCTTGGACACCTTGTTCCAGTCCTCACGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SREVSPSTQPWTPCSSPHVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...GTGAGGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGAGACACTTCCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACGAGGTCAGCCCTGCCTaGCACAGACAACCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHEVSPA*HRQPRA
Trigger: GGCCCTCGGTTGTCTGTGCAAGGCAGGGCTGACCTC...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCGAGGTCAGCCCTGCCTaGCACAGACAACCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCEVSPA*HRQPRA
Trigger: GGCCCTCGGTTGTCTGTGCAAGGCAGGGCTGACCTC...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGGGACACCCCTGCTGCTaGTCAGTGCTCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGGHPCC*SVLLSA
Trigger: GGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCC...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AAGGAGAAGCCCCAGAATGATGAACTGCTCATAAGTAGAAGTGTCCTTGAGGTGCTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: KEKPQNDELLISRSVLEVLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...CACCTCAAGGACACTTCTACTTATGAGCAGTTCATCATTCTGGGGCTTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSIAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: QSGTCREFKSSSRGSRISLASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GCCTGGAAGGATACGGGCGTGGCAGGACTCTCACGCACGGTGACCACGCTGGCCAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: AWKDTGVAGLSRTVTTLASCFSI*VILAFK
Trigger: CTTAAACGCCAAAATGACCAATATTGAGAAACAGCT...GGCCAGCGTGGTCACCGTGCGTGAGAGTCCTGCCACGCCCGTATCCTTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGCGTCCTTTGGCTATCTaGTCATGTCCAGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: DLKGPSPALTLASPPLGKRPLAI*SCPVEE
Trigger: CTCCTCCACTGGACATGACAAGATAGCCAAAGGACG...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS CCA 90 bp GCTGAACAGGCTGCTGATGCCCTGACTCTCTCTCCCCTCCAGTGGTaGTGGAATCTGATCAGCAAAACCAATCTTCCCTGGATCACCCAT +
Preference number: 5 (lower is better)
Translates to: AEQAADALTLSPLQW*WNLISKTNLPWITH
Trigger: ATGGGTGATCCAGGGAAGATTGGTTTTGCTGATCAGATTCCACCACCACTGGAGGGGAGAGAGAGTCAGGGCATCAGCAGCCTGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638498.1
ENST00000639754.1
CDS-3UTR CAA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHDILAF*HAWSQL
Trigger: CAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTC...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGAGTCTTTGGTGCCTCTaGCTTGTACTGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: DLKGPSPALTLASPPLGKSLWCL*LVLGKD
Trigger: ATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGACT...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CCATCACTGGCCAGCCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: PSLASRKAGCSLNTLRFRTFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...CCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGGCTGGCCAGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAA +
Preference number: 5 (lower is better)
Translates to: DLKGPSPALTLASPPLGKSCCCG*SWCPRQ
Trigger: TTGACGAGGACACCAAGACAATCCGCAACAACAGCT...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGTCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCATCCTCTTCCTCAAGTaGTACGTCAGAATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFILFLK*YVRIRF
Trigger: GAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 5 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGCSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CTGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: LRSSSWCEKEGRKVWLIYKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...GTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTAAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: RGTLPFPYLFPDRERARLKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CCATCACTGGGAGCCACAGCTCCAAGGCCACTTCTCTCCATCACCTTACAGAGATTGGCGTTTAAGGCCTaGATGTCCTCCTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PSLGATAPRPLLSITLQRLAFKA*MSSFSS
Trigger: CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAA...TCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGAGCTGTGGCTCCCAGTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGATGCCGGGAAGTCCTaGGCCCACTGCAGTCCATGG +
Preference number: 5 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVDAGKS*AHCSPW
Trigger: CCATGGACTGCAGTGGGCCAAGGACTTCCCGGCATC...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTGTCTGTGTGTCTGCTTaGTTAATAAAGCAACTCTGG +
Preference number: 5 (lower is better)
Translates to: AGREGTHQSGTCREFKSSVCVSA*LIKQLW
Trigger: CCAGAGTTGCTTTATTAACAAAGCAGACACACAGAC...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp ATGGGTTGCACCGCAGAGAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTATATACAGTGGTGTTCTaGGCAGCATCCTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: MGCTAENPWILRAPLQLLYTVVF*AASSAD
Trigger: GTCAGCTGAGGATGCTGCCAAGAACACCACTGTATA...TAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTCTCTGCGGTGCAACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS TCA 90 bp GGAGATGTAGACAGAATTCTTGCTGGGACCACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTGGTAAGGGGTGCCAATGTCCATCGC +
Preference number: 5 (lower is better)
Translates to: GDVDRILAGTTFPLP*ARPIKLVRGANVHR
Trigger: GCGATGGACATTGGCACCCCTTACCAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTCTACATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS-3UTR CAA 90 bp CCGGAAGGCCGGGTGCTCCTTGAACACCTTGCGGTTCAGGTGCACGCAGATGTCGGTGTCCTGTTCTTCTaGTACATCAGAATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: PEGRVLLEHLAVQVHADVGVLFF*YIRISK
Trigger: CTTTGAAATTCTGATGTACAAGAAGAACAGGACACC...GACATCTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCACCCGGCCTTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640243.1
ENST00000640522.1
CDS-3UTR CAA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGGACACCCCTGCTGCTaGTCAGTGCTCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCGHPCC*SVLLSA
Trigger: GGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGCGCCTTTTTGCACGCTaGGAGCCAGCTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: SGTCREFKSSSRGSRISLRLFAR*EPAAAG
Trigger: TCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCG...CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: HQSGTCREFKSSSRGSRIARREC*WTFSPF
Trigger: AAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp ATAGGGGCTTGGATGGCCCATACGCAGTTCTGTGACCATCACTGGGAGCCACAGTTGTTGCGGATTGTCTaGGTGTCCTCGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: IGAWMAHTQFCDHHWEPQLLRIV*VSSSKI
Trigger: GATCTTTGACGAGGACACCAAGACAATCCGCAACAA...CTGTGGCTCCCAGTGATGGTCACAGAACTGCGTATGGGCCATCCAAGCCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAA +
Preference number: 5 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDSCCCG*SWCPRQ
Trigger: TTGACGAGGACACCAAGACAATCCGCAACAACAGCT...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTGGTACAGCCAGCTGTaGTTGCGGATTGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHWYSQL*LRIVLV
Trigger: CACCAAGACAATCCGCAACAACAGCTGGCTGTACCA...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CAACAGATGGGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTGGTTGGCATCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: QQMGFQIFYGLLPKDWLASALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...TGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCCCATCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTATCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCATGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: SKATSLHHLTESWKLTASCSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCTGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCCSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAACSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGSIDSA*DTLFQS
Trigger: GGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGA...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCCCTCGCCTGACGCTTTaGTCCTCTCGGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCPRLTL*SSREVS
Trigger: AGACACTTCCCGAGAGGACAAAAGCGTCAGGCGAGG...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTACCTCGCCTGACGCTTTaGTCCTCTCGGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLPRLTL*SSREVS
Trigger: AGACACTTCCCGAGAGGACAAAAGCGTCAGGCGAGG...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACACTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTLASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: PSHRYTVVFLAASSADHKVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...TTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATGATGCCGGGAAGTCCTaGGCCCACTGCAGTCCATGG +
Preference number: 5 (lower is better)
Translates to: QWCSWQHPQLTTKIVSAHDAGKS*AHCSPW
Trigger: CCATGGACTGCAGTGGGCCAAGGACTTCCCGGCATC...ATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp TGCGGTCAAGTTCATGGTGCGAAAAGGAAGGGAGAAAGGTTTGGCTCATTTACAGGAGCAGGCTATGGGTaGCACCGCAGAGAACCCCTG +
Preference number: 5 (lower is better)
Translates to: CGQVHGAKRKGERFGSFTGAGYG*HRREPL
Trigger: CAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCC...TGTAAATGAGCCAAACCTTTCTCCCTTCCTTTTCGCACCATGAACTTGACCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TCCAAGGCCACTTCTCTCCATCACCTTACAGAGAGCTGGAAACTCACTGCTTCATCGTGGCATAGGGGCTaGGATGGCCCATACGCAGTT +
Preference number: 5 (lower is better)
Translates to: SKATSLHHLTESWKLTASSWHRG*DGPYAV
Trigger: AACTGCGTATGGGCCATCCAAGCCCCTATGCCACGA...TGAAGCAGTGAGTTTCCAGCTCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGAGCAGGACTCTCCCTaGAGCTCGCAGGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCEQDSP*SSQALS
Trigger: AGACAAGGCCTGCGAGCTCAAGGGAGAGTCCTGCTC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTGGGGAAGGGAGAAAGGTTaGGCTCATTTACACAATGTT +
Preference number: 5 (lower is better)
Translates to: LSTVPEEQAMGCTAENPWGREKG*AHLHNV
Trigger: AACATTGTGTAAATGAGCCAAACCTTTCTCCCTTCC...CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCAACCCAATAAAGGATTaGGCAGGACTCAATGGAAAG +
Preference number: 5 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFNPIKD*AGLNGK
Trigger: CTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAADILAF*HAWSQL
Trigger: CAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTC...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLARREC*WTFSPF
Trigger: AAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACAGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTARREC*WTFSPF
Trigger: AAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATAGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSIARREC*WTFSPF
Trigger: AAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTGGTGCCTCTTGCTaGTACTGGGGAAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHFGASC*YWGRMS
Trigger: AGACATCCTTCCCCAGTACAAGCAAGAGGCACCAAA...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTGTGAGGGGGAGTCTTaGGTGCCTCTTGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGCEGES*VPLACT
Trigger: AGTACAAGCAAGAGGCACCAAAGACTCCCCCTCACA...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATTTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCCCTGGACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: LSTVPEEQAMGCTAENPWTFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...CCAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GCCTTCACGAGGCTGTGGTTGGCGGAGGCATGCTCTGTAAGGACATTGCCCTTCTGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: AFTRLWLAEACSVRTLPFWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...GAAGGGCAATGTCCTTACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTGCAGGGCATCCCGCTaGATCACATGCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAACRASR*ITCRSQ
Trigger: CTGTGATCTGCATGTGATCAAGCGGGATGCCCTGCA...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATATGCAGGGCATCCCGCTaGATCACATGCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: HQSGTCREFKSSSRGSRICRASR*ITCRSQ
Trigger: CTGTGATCTGCATGTGATCAAGCGGGATGCCCTGCA...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTGCAGGGCATCCCGCTaGATCACATGCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFCRASR*ITCRSQ
Trigger: CTGTGATCTGCATGTGATCAAGCGGGATGCCCTGCA...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CTCTTCCTCAAGTTGTACGTCAGAATCAGGTTCCGGGAGAAGGAATGGGAGAAGTGCAGGGCATCCCGCTaGATCACATGCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: LFLKLYVRIRFREKEWEKCRASR*ITCRSQ
Trigger: CTGTGATCTGCATGTGATCAAGCGGGATGCCCTGCA...CTTCTCCCATTCCTTCTCCCGGAACCTGATTCTGACGTACAACTTGAGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCAGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGAAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTACCTCGCCTGACGCTTTaGTCCTCTCGGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVPRLTL*SSREVS
Trigger: AGACACTTCCCGAGAGGACAAAAGCGTCAGGCGAGG...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCCTCGCCTGACGCTTTaGTCCTCTCGGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCPRLTL*SSREVS
Trigger: AGACACTTCCCGAGAGGACAAAAGCGTCAGGCGAGG...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVRRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTAAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: RGTLPFPYLFPDRERARLRRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTCTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: MRSQSMILLASAHFEKASLASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GCAGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: AGREGTHQSGTCREFKSSSCFSI*VILAFK
Trigger: CTTAAACGCCAAAATGACCAATATTGAGAAACAGCT...ACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TCCACTGTGCCTGGAAGAGACTTCACTCCTTTCCTTTCTCAGATGCCATTGAGACTCCAGCTCTTACCCTaGCCTCACCTCCTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: STVPGRDFTPFLSQMPLRLQLLP*PHLLWG
Trigger: TCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAG...TCTCAATGGCATCTGAGAAAGGAAAGGAGTGAAGTCTCTTCCAGGCACAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp TGTTTCCGTCCTTTGGCTATCTTGTCATGTCCAGTGGAGGAGCCCTTTGTAAGTTCGTGGCATAGGGGCTaGGATGGCCCATACGCAGTT +
Preference number: 5 (lower is better)
Translates to: CFRPLAILSCPVEEPFVSSWHRG*DGPYAV
Trigger: AACTGCGTATGGGCCATCCAAGCCCCTATGCCACGA...ACTTACAAAGGGCTCCTCCACTGGACATGACAAGATAGCCAAAGGACGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTATCGTGGCATAGGGGCTaGGATGGCCCATACGCAGTT +
Preference number: 5 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVSWHRG*DGPYAV
Trigger: AACTGCGTATGGGCCATCCAAGCCCCTATGCCACGA...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGAGCAGGACTCTCCCTaGAGCTCGCAGGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSEQDSP*SSQALS
Trigger: AGACAAGGCCTGCGAGCTCAAGGGAGAGTCCTGCTC...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp AGGCAGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCACAAACACCACCTCATaGACCATCTTAGTTCTTAGA +
Preference number: 5 (lower is better)
Translates to: RQGGHPPVWHLQGIQVQFTNTTS*TILVLR
Trigger: TCTAAGAACTAAGATGGTCAATGAGGTGGTGTTTGT...GAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGTATACAGTGGTGTTCTaGGCAGCATCCTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQYTVVF*AASSAD
Trigger: GTCAGCTGAGGATGCTGCCAAGAACACCACTGTATA...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS GCA 90 bp AAGGGGTGCCAATGTCCATCGCTAGTTGGTACAGCCAGCTGTTGTTaGGGATTGTCTTGGTGTCCTCGTCAAAGATCTCATAGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: KGCQCPSLVGTASCC*GLSWCPRQRSHSPQ
Trigger: TTGGGGACTATGAGATCTTTGACGAGGACACCAAGACAATCCGCAACAACAGCTGGCTGTACCAACTAGCGATGGACATTGGCACCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639385.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CCA 90 bp AGATGGTGGCATAGAGAAGTGCTGACTCTCTCTCCCCTCCAGTGGTaGTGGAATCTGATCAGCAAAACCAATCTTCCCTGGATCACCCAT +
Preference number: 5 (lower is better)
Translates to: RWWHREVLTLSPLQW*WNLISKTNLPWITH
Trigger: ATGGGTGATCCAGGGAAGATTGGTTTTGCTGATCAGATTCCACCACCACTGGAGGGGAGAGAGAGTCAGCACTTCTCTATGCCACCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS-3UTR CAA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGTCCTCAATTGGCTGTTaGAAAGCTGTTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: DLKGPSPALTLASPPLGKSSIGC*KAVMSL
Trigger: CAGTGACATAACAGCTTTCAAACAGCCAATTGAGGA...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp AAAATTTCCCAGAGTATGCATGGGAGACATAGTGGTCAGTGCAACAAGGGGAAACGCCTTTTTGCACGCTaGGAGCCAGCTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: KISQSMHGRHSGQCNKGKRLFAR*EPAAAG
Trigger: TCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCG...TTTCCCCTTGTTGCACTGACCACTATGTCTCCCATGCATACTCTGGGAAATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGTGTGAGGGGGAGTCTTaGGTGCCTCTTGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQCEGES*VPLACT
Trigger: AGTACAAGCAAGAGGCACCAAAGACTCCCCCTCACA...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CTTCCCGCAAGCATCTTTGAAGCGGGCCCAGCTTTTGCGCTTGGCACAATCGCCACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: LPASIFEAGPAFALGTIATFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...GGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAA +
Preference number: 5 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGSCCCG*SWCPRQ
Trigger: TTGACGAGGACACCAAGACAATCCGCAACAACAGCT...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAA +
Preference number: 5 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTSCCCG*SWCPRQ
Trigger: TTGACGAGGACACCAAGACAATCCGCAACAACAGCT...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTGGTACAGCCAGCTGTaGTTGCGGATTGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAWYSQL*LRIVLV
Trigger: CACCAAGACAATCCGCAACAACAGCTGGCTGTACCA...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCTGCAGGGCATCCCGCTaGATCACATGCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCCRASR*ITCRSQ
Trigger: CTGTGATCTGCATGTGATCAAGCGGGATGCCCTGCA...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTATGCAGGGCATCCCGCTaGATCACATGCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVCRASR*ITCRSQ
Trigger: CTGTGATCTGCATGTGATCAAGCGGGATGCCCTGCA...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACATGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 5 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTCSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: IRGGCILQHKISLYPDTRAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: KSSSRGSRISLICLHENEAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAATCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKSIDSA*DTLFQS
Trigger: GGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGA...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCACTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSLASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCGTTTAAGGCCTaGATGTCCTCCTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFLAFKA*MSSFSS
Trigger: CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAA...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTAGGAGCAGGCTATGGGTaGCACCGCAGAGAACCCCTG +
Preference number: 5 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLGAGYG*HRREPL
Trigger: CAGGGGTTCTCTGCGGTGCAACCCATAGCCTGCTCC...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CCCTCCCTGTCAACTGTCCCAGAGGAGCAGGCTATGGGTTGCACCGCAGAGAACCAGCTTTTTAAATACTaGGGCTATCCTGTAGCATTA +
Preference number: 5 (lower is better)
Translates to: PSLSTVPEEQAMGCTAENQLFKY*GYPVAL
Trigger: TAATGCTACAGGATAGCCCAAGTATTTAAAAAGCTG...GTTCTCTGCGGTGCAACCCATAGCCTGCTCCTCTGGGACAGTTGACAGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTAGAGAGGAAGGGGCATaGGCAGCTCTATCACAGCTG +
Preference number: 5 (lower is better)
Translates to: QSGTCREFKSSSRGSRISREEGA*AALSQL
Trigger: CAGCTGTGATAGAGCTGCCAATGCCCCTTCCTCTCT...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS CCA 90 bp TGTCCATCGCTAGTTGGTACAGCCAGCTGTTGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCTCATAGTCCCCAATGCTGTACCAGA +
Preference number: 5 (lower is better)
Translates to: CPSLVGTASCCCGLS*CPRQRSHSPQCCTR
Trigger: TCTGGTACAGCATTGGGGACTATGAGATCTTTGACGAGGACACCAAGACAATCCGCAACAACAGCTGGCTGTACCAACTAGCGATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639385.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS-3UTR CAA 90 bp GAACCCCTGGATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTACAAAATTAGTATCATaGGACCGCCGAACAATATTC +
Preference number: 5 (lower is better)
Translates to: EPLDLKGPSPALTLASPPTKLVS*DRRTIF
Trigger: GAATATTGTTCGGCGGTCCAATGATACTAATTTTGT...AGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATCCAGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp AGGGAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTGTCCTGTTCTTCTaGTACATCAGAATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: REGTHQSGTCREFKSSSRGVLFF*YIRISK
Trigger: CTTTGAAATTCTGATGTACAAGAAGAACAGGACACC...TCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATATTTGGTGCCTCTTGCTaGTACTGGGGAAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: HQSGTCREFKSSSRGSRIFGASC*YWGRMS
Trigger: AGACATCCTTCCCCAGTACAAGCAAGAGGCACCAAA...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTTGTGAGGGGGAGTCTTaGGTGCCTCTTGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLCEGES*VPLACT
Trigger: AGTACAAGCAAGAGGCACCAAAGACTCCCCCTCACA...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: DLKGPSPALTLASPPLGKTFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAA +
Preference number: 5 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHSCCCG*SWCPRQ
Trigger: TTGACGAGGACACCAAGACAATCCGCAACAACAGCT...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAATACAGCCAGCTGTTGTaGCGGATTGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: QATDIQWCSWQHPQLTTKYSQLL*RIVLVS
Trigger: GGACACCAAGACAATCCGCAACAACAGCTGGCTGTA...TTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATAGAGAAAGAGCACGTCTATGGTACAGCCAGCTGTaGTTGCGGATTGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RGTLPFPYLFPDRERARLWYSQL*LRIVLV
Trigger: CACCAAGACAATCCGCAACAACAGCTGGCTGTACCA...TAGACGTGCTCTTTCTCTATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LIEQLMDPSDDSEVTDKGVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...CCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 5 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAACSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTCTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGCCCAGCTTTTGCGCTaGGCACAATCGCCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALAQLLR*AQSPPP
Trigger: GGGCGGGGGCGATTGTGCCAAGCGCAAAAGCTGGGC...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: LFKNVEKGISSMEGPARSKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: FLAASSADHKNSISSFTLKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: IINGRACTFLLTFPSHRYFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATATCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: ATDIQWCSWQHPQLTTKISIDSA*DTLFQS
Trigger: GGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGA...TATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp CTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGCCTCGCCTGACGCTTTaGTCCTCTCGGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: LIEQLMDPSDDSEVTDKGPRLTL*SSREVS
Trigger: AGACACTTCCCGAGAGGACAAAAGCGTCAGGCGAGG...CCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTRRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATACCCACTGGATCGAAGAGGTaGTGGGTAAAACAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: LLIKQLWAHDPSCRCSIPTGSKR*WVKQSP
Trigger: TGGGGACTGTTTTACCCACAACCTCTTCGATCCAGT...GGGTATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTGCAAAATCCATCATaGCTGTACACAATAGGCCAG +
Preference number: 5 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHLQNPS*LYTIGQ
Trigger: CTGGCCTATTGTGTACAGCAATGATGGATTTTGCAA...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CCATCACTGGGAGCCACAGCTCCAAGGCCACTTCTCTCCATCACCTTACAGAGACCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: PSLGATAPRPLLSITLQRPVRFE*EQFSQR
Trigger: TCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGG...TCTCTGTAAGGTGATGGAGAGAAGTGGCCTTGGAGCTGTGGCTCCCAGTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GCTGCCACCTTGCAGGGTAGGGGCACGCTACCCTTCCCATATCTTTTTCCAGATCCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: AATLQGRGTLPFPYLFPDPVRFE*EQFSQR
Trigger: TCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGG...ATCTGGAAAAAGATATGGGAAGGGTAGCGTGCCCCTACCCTGCAAGGTGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGTCCTCAATTGGCTGTTaGAAAGCTGTTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQSSIGC*KAVMSL
Trigger: CAGTGACATAACAGCTTTCAAACAGCCAATTGAGGA...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCTGCTTGTCAGTGCTCTaGTCAGCCGAGCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSICLSVL*SAEQTS
Trigger: GGAAGTTTGCTCGGCTGACAAGAGCACTGACAAGCA...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGTGCTGCTTGTCAGTGCTCTaGTCAGCCGAGCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: SILVILAFKALMSSFSSCCLSVL*SAEQTS
Trigger: GGAAGTTTGCTCGGCTGACAAGAGCACTGACAAGCA...GCACGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp CAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTGCTTGTCAGTGCTCTaGTCAGCCGAGCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: QWCSWQHPQLTTKIVSAHCLSVL*SAEQTS
Trigger: GGAAGTTTGCTCGGCTGACAAGAGCACTGACAAGCA...ATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACCGCCTTTTTGCACGCTaGGAGCCAGCTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: VDSLQLMHKYSIGILREYRLFAR*EPAAAG
Trigger: TCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCG...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CAACAGATGGGATTCCAGATATTTTACGGCCTCTTACCCAAGGACTGGTTGGCATTTGGTGCCTCTTGCTaGTACTGGGGAAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: QQMGFQIFYGLLPKDWLAFGASC*YWGRMS
Trigger: AGACATCCTTCCCCAGTACAAGCAAGAGGCACCAAA...TGCCAACCAGTCCTTGGGTAAGAGGCCGTAAAATATCTGGAATCCCATCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TCCACTGTGCCTGGAAGAGACTTCACTCCTTTCCTTTCTCAGATGCCATTGAGAAGTCTTTGGTGCCTCTaGCTTGTACTGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: STVPGRDFTPFLSQMPLRSLWCL*LVLGKD
Trigger: ATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGACT...TCTCAATGGCATCTGAGAAAGGAAAGGAGTGAAGTCTCTTCCAGGCACAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp AATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGACTGTGAGTCTTTGGTGCCTCTaGCTTGTACTGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: NRPLSWLQKCLSLILGTVSLWCL*LVLGKD
Trigger: ATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGACT...CACAGTCCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS-3UTR CAA 90 bp TTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTAAGTCTTTGGTGCCTCTaGCTTGTACTGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: FFQNCAKTVQMQLPPCRVSLWCL*LVLGKD
Trigger: ATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGACT...TACCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTGTGAGGGGGAGTCTTaGGTGCCTCTTGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: QWCSWQHPQLTTKIVSAHCEGES*VPLACT
Trigger: AGTACAAGCAAGAGGCACCAAAGACTCCCCCTCACA...ATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: RACTFLLTFPSHRYTVVFFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...GAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCTTGTTGCGGATTGTCTaGGTGTCCTCGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: CPFFQNCAKTVQMQLPPCLLRIV*VSSSKI
Trigger: GATCTTTGACGAGGACACCAAGACAATCCGCAACAA...GCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATATACAGCCAGCTGTTGTaGCGGATTGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: ATDIQWCSWQHPQLTTKIYSQLL*RIVLVS
Trigger: GGACACCAAGACAATCCGCAACAACAGCTGGCTGTA...TATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGGCGCAAGTCGCTCTTGGTGATGCCACTGTCACACGAGTCTGTCTTCTTCAGTTGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: RRKSLLVMPLSHESVFFSWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...ACTGAAGAAGACAGACTCGTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCATCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: YKICELLIEQLMDPSDDSSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCATCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKAVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: MRSQSMILLASAHFEKASFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGCTGGCGCCTGTAGCTTaGCGTGGTCTGGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRLAPVA*RGLAPR
Trigger: CCGGGGTGCCAGACCACGCAAAGCTACAGGCGCCAG...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: IRGGCILQHKISLYPDTRKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: KSSSRGSRISLICLHENEKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: GEGASFNIRSVYILIQDLRRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACAAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTRRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTCTGGCCTCACCCACGTaGTCCAGGCGCAAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSLASPT*SRRKSL
Trigger: GAGCGACTTGCGCCTGGACAACGTGGGTGAGGCCAG...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTAGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GATCTTAAGGGCCCCTCTCCAGCTCTTACCCTTGCCTCACCTCCTTTGGGGAAGTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: DLKGPSPALTLASPPLGKLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...CTTCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAGAGGGGCCCTTAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GAGGGCACCCACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: EGTHQSGTCREFKSSSRGLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...ACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTGGGTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATGCCGGGAAGTCCTaGGCCCACTGCAGTCCATGG +
Preference number: 5 (lower is better)
Translates to: SLGEGASFNIRSVYILIQDAGKS*AHCSPW
Trigger: CCATGGACTGCAGTGGGCCAAGGACTTCCCGGCATC...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp ACACAGGCAAAGGTAAGCTCCCTGGATAAGTCCATGCTGTCACCTGTACTCCTATCCCTCAAGCTCTGCTaGTCCCGAGCTAGTTATAAA +
Preference number: 5 (lower is better)
Translates to: TQAKVSSLDKSMLSPVLLSLKLC*SRASYK
Trigger: TTTATAACTAGCTCGGGACAAGCAGAGCTTGAGGGA...TAGGAGTACAGGTGACAGCATGGACTTATCCAGGGAGCTTACCTTTGCCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CACCAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATATCCCTCAAGCTCTGCTaGTCCCGAGCTAGTTATAAA +
Preference number: 5 (lower is better)
Translates to: HQSGTCREFKSSSRGSRISLKLC*SRASYK
Trigger: TTTATAACTAGCTCGGGACAAGCAGAGCTTGAGGGA...TATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGCAGGGCCTCTTGACATaGACCGTTGGGTGCCAGACA +
Preference number: 5 (lower is better)
Translates to: GEGASFNIRSVYILIQDLQGLLT*TVGCQT
Trigger: TGTCTGGCACCCAACGGTCAATGTCAAGAGGCCCTG...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCGTCCTTTGGCTATCTaGTCATGTCCAGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSIRPLAI*SCPVEE
Trigger: CTCCTCCACTGGACATGACAAGATAGCCAAAGGACG...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CAACGTGTATCTCCACCAGGGCTCCTAAAATTTCCCAGAGTATGCATGGGAGACCTCTGTTTCCGTCCTTaGGCTATCTTGTCATGTCCA +
Preference number: 5 (lower is better)
Translates to: QRVSPPGLLKFPRVCMGDLCFRP*AILSCP
Trigger: TGGACATGACAAGATAGCCAAAGGACGGAAACAGAG...GTCTCCCATGCATACTCTGGGAAATTTTAGGAGCCCTGGTGGAGATACACGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACAACCCAATAAAGGATTaGGCAGGACTCAATGGAAAG +
Preference number: 5 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHNPIKD*AGLNGK
Trigger: CTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACGGACACCCCTGCTGCTaGTCAGTGCTCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: GCILQHKISLYPDTRSVNGHPCC*SVLLSA
Trigger: GGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCC...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGCGCCTTTTTGCACGCTaGGAGCCAGCTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLRLFAR*EPAAAG
Trigger: TCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCG...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGAGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRDILAF*HAWSQL
Trigger: CAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTC...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCTTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQTFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTTTGTTGCGGATTGTCTaGGTGTCCTCGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: QSGTCREFKSSSRGSRISLLRIV*VSSSKI
Trigger: GATCTTTGACGAGGACACCAAGACAATCCGCAACAA...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCATGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSCSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAATGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: KICELLIEQLMDPSDDSECSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCAGTCAAGGCCCTAACATaGGCACAGGACTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGAVKALT*AQDWAR
Trigger: CCTTGCCCAGTCCTGTGCCAATGTTAGGGCCTTGAC...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTGCAGGGCATCCCGCTaGATCACATGCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKACRASR*ITCRSQ
Trigger: CTGTGATCTGCATGTGATCAAGCGGGATGCCCTGCA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACATCCTCTTCCTCAAGTaGTACGTCAGAATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHILFLK*YVRIRF
Trigger: GAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCATGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 5 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSCSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCATTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGAFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAATTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: KICELLIEQLMDPSDDSEFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAAAGCGGGCCCAGCTTTaGCGCTTGGCACAATCGCCC +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALKRAQL*RLAQSP
Trigger: GGGCGATTGTGCCAAGCGCAAAAGCTGGGCCCGCTT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GEGASFNIRSVYILIQDLFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTATTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKASIDSA*DTLFQS
Trigger: GGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GGGGGTCTTGGCAAAGGAGCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTCAATATTGGTCATTTaGGCGTTTAAGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: GGLGKGAQHSIYMRGSRHSILVI*AFKALM
Trigger: CATCAAGGCCTTAAACGCCAAAATGACCAATATTGA...GTGCCGAGAACCTCTCATGTATATACTATGCTGGGCTCCTTTGCCAAGACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGTTACCCAAGGACTGGTaGGCAGCTTCTCAAGTGAAA +
Preference number: 5 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVLPKDW*AASQVK
Trigger: TTTCACTTGAGAAGCTGCCAACCAGTCCTTGGGTAA...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGTTACCCAAGGACTGGTaGGCAGCTTCTCAAGTGAAA +
Preference number: 5 (lower is better)
Translates to: SGTCREFKSSSRGSRISLLPKDW*AASQVK
Trigger: TTTCACTTGAGAAGCTGCCAACCAGTCCTTGGGTAA...CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAAGAGAGGAAGGGGCATaGGCAGCTCTATCACAGCTG +
Preference number: 5 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSREEGA*AALSQL
Trigger: CAGCTGTGATAGAGCTGCCAATGCCCCTTCCTCTCT...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTATACAGTGGTGTTCTaGGCAGCATCCTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: QWCSWQHPQLTTKIVSAHYTVVF*AASSAD
Trigger: GTCAGCTGAGGATGCTGCCAAGAACACCACTGTATA...ATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCATATACAGTGGTGTTCTaGGCAGCATCCTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSYTVVF*AASSAD
Trigger: GTCAGCTGAGGATGCTGCCAAGAACACCACTGTATA...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCTTGTCAGTGCTCTaGTCAGCCGAGCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRCLSVL*SAEQTS
Trigger: GGAAGTTTGCTCGGCTGACAAGAGCACTGACAAGCA...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGGACACCCCTGCTGCTaGTCAGTGCTCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSGHPCC*SVLLSA
Trigger: GGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACGCCTTTTTGCACGCTaGGAGCCAGCTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALRLFAR*EPAAAG
Trigger: TCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCG...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTGTGAGGGGGAGTCTTaGGTGCCTCTTGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKACEGES*VPLACT
Trigger: AGTACAAGCAAGAGGCACCAAAGACTCCCCCTCACA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTACAGCCAGCTGTTGTaGCGGATTGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: MRSQSMILLASAHFEKASYSQLL*RIVLVS
Trigger: GGACACCAAGACAATCCGCAACAACAGCTGGCTGTA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACATACAGCCAGCTGTTGTaGCGGATTGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTYSQLL*RIVLVS
Trigger: GGACACCAAGACAATCCGCAACAACAGCTGGCTGTA...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTGGTACAGCCAGCTGTaGTTGCGGATTGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: MRSQSMILLASAHFEKASWYSQL*LRIVLV
Trigger: CACCAAGACAATCCGCAACAACAGCTGGCTGTACCA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTGGTACAGCCAGCTGTaGTTGCGGATTGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKAWYSQL*LRIVLV
Trigger: CACCAAGACAATCCGCAACAACAGCTGGCTGTACCA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAATGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: SLGEGASFNIRSVYILIQCSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCATCCTCTTCCTCAAGTaGTACGTCAGAATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCILFLK*YVRIRF
Trigger: GAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACATGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTCSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTTCACGAGGCTGTGGTaGGCGGAGGCATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLFTRLW*AEACSV
Trigger: TACAGAGCATGCCTCCGCCAACCACAGCCTCGTGAA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: FLAASSADHKNSISSFTLFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCATCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGASIDSA*DTLFQS
Trigger: GGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGA...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGCCTCGCCTGACGCTTTaGTCCTCTCGGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLPRLTL*SSREVS
Trigger: AGACACTTCCCGAGAGGACAAAAGCGTCAGGCGAGG...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGACCTCGCCTGACGCTTTaGTCCTCTCGGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: IRGGCILQHKISLYPDTRPRLTL*SSREVS
Trigger: AGACACTTCCCGAGAGGACAAAAGCGTCAGGCGAGG...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp CCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTCAATATTGGTCATTTaGGCGTTTAAGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: PSSKIVQRRFRCSCHLAGSILVI*AFKALM
Trigger: CATCAAGGCCTTAAACGCCAAAATGACCAATATTGA...CCCTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GCCCAGCATAGTATATACATGAGAGGTTCTCGGCACTTTCCCACCAGTCCCCAGAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: AQHSIYMRGSRHFPTSPQSCFSI*VILAFK
Trigger: CTTAAACGCCAAAATGACCAATATTGAGAAACAGCT...CTGGGGACTGGTGGGAAAGTGCCGAGAACCTCTCATGTATATACTATGCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SLGEGASFNIRSVYILIQVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGACTCCAGCTCTTACCCTaGCCTCACCTCCTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: IRGGCILQHKISLYPDTRLQLLP*PHLLWG
Trigger: TCCCCAAAGGAGGTGAGGCAAGGGTAAGAGCTGGAG...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACGTCTGTGTGTCTGCTTaGTTAATAAAGCAACTCTGG +
Preference number: 5 (lower is better)
Translates to: GNIINGRACTFLLTFPSHVCVSA*LIKQLW
Trigger: CCAGAGTTGCTTTATTAACAAAGCAGACACACAGAC...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAACTTCAGAAGCAGGTaGAGGAGCATGTTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: SQATDIQWCSWQHPQLTTNFRSR*RSMFKK
Trigger: TTTCTTAAACATGCTCCTCAACCTGCTTCTGAAGTT...TGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAAAATGGCAGGGCCTCTaGACATTGACCGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSKWQGL*TLTVGC
Trigger: GCACCCAACGGTCAATGTCAAGAGGCCCTGCCATTT...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TGTTTCCGTCCTTTGGCTATCTTGTCATGTCCAGTGGAGGAGCCCTTTGTAAGTGCCTGGACAAAGAGCTaGACAGTTGGCATAATACTT +
Preference number: 5 (lower is better)
Translates to: CFRPLAILSCPVEEPFVSAWTKS*TVGIIL
Trigger: AAGTATTATGCCAACTGTCAAGCTCTTTGTCCAGGC...ACTTACAAAGGGCTCCTCCACTGGACATGACAAGATAGCCAAAGGACGGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTTTGCAAAATCCATCATaGCTGTACACAATAGGCCAG +
Preference number: 5 (lower is better)
Translates to: QSGTCREFKSSSRGSRISLQNPS*LYTIGQ
Trigger: CTGGCCTATTGTGTACAGCAATGATGGATTTTGCAA...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCGGTGTCCTGTTCTTCTaGTACATCAGAATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAGVLFF*YIRISK
Trigger: CTTTGAAATTCTGATGTACAAGAAGAACAGGACACC...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGGGTGTCCTGTTCTTCTaGTACATCAGAATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQGVLFF*YIRISK
Trigger: CTTTGAAATTCTGATGTACAAGAAGAACAGGACACC...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCCCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAAPVRFE*EQFSQR
Trigger: TCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGG...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTTCCTCAATTGGCTGTTaGAAAGCTGTTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: QSGTCREFKSSSRGSRISSSIGC*KAVMSL
Trigger: CAGTGACATAACAGCTTTCAAACAGCCAATTGAGGA...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCTCCTCAATTGGCTGTTaGAAAGCTGTTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: RQHVPSSKIVQRRFRCSCSSIGC*KAVMSL
Trigger: CAGTGACATAACAGCTTTCAAACAGCCAATTGAGGA...GCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTTGCTTGTCAGTGCTCTaGTCAGCCGAGCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLCLSVL*SAEQTS
Trigger: GGAAGTTTGCTCGGCTGACAAGAGCACTGACAAGCA...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGGACACCCCTGCTGCTaGTCAGTGCTCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSGHPCC*SVLLSA
Trigger: GGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTGGACACCCCTGCTGCTaGTCAGTGCTCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: KEKENPIKDLAGLNGKSIGHPCC*SVLLSA
Trigger: GGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCC...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCGCCTTTTTGCACGCTaGGAGCCAGCTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSRLFAR*EPAAAG
Trigger: TCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: IRGGCILQHKISLYPDTRDILAF*HAWSQL
Trigger: CAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTC...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALARREC*WTFSPF
Trigger: AAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYARREC*WTFSPF
Trigger: AAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATTTGGTGCCTCTTGCTaGTACTGGGGAAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRFGASC*YWGRMS
Trigger: AGACATCCTTCCCCAGTACAAGCAAGAGGCACCAAA...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTATTTGGTGCCTCTTGCTaGTACTGGGGAAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLFGASC*YWGRMS
Trigger: AGACATCCTTCCCCAGTACAAGCAAGAGGCACCAAA...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTTTGGTGCCTCTTGCTaGTACTGGGGAAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKAFGASC*YWGRMS
Trigger: AGACATCCTTCCCCAGTACAAGCAAGAGGCACCAAA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCAGTCTTTGGTGCCTCTaGCTTGTACTGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKASLWCL*LVLGKD
Trigger: ATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGACT...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGAAGTCTTTGGTGCCTCTaGCTTGTACTGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRSLWCL*LVLGKD
Trigger: ATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGACT...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHTFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTTGGTACAGCCAGCTGTaGTTGCGGATTGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLWYSQL*LRIVLV
Trigger: CACCAAGACAATCCGCAACAACAGCTGGCTGTACCA...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACATGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGTGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: SGTCREFKSSSRGSRISLWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...CAGACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: MRSQSMILLASAHFEKASAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCGGCTCTCATGTCCTaGGGGCAGATCTGCAGGACC +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSSALMS*GQICRT
Trigger: GGTCCTGCAGATCTGCCCCAAGGACATGAGAGCCGA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYCSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTTGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 5 (lower is better)
Translates to: MRSQSMILLASAHFEKASCSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYRRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGGCGCAAGTCGCTCTaGGTGATGCCACTGTCACAC +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSRRKSL*VMPLSH
Trigger: GTGTGACAGTGGCATCACCAAGAGCGACTTGCGCCT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCTCAATATTGGTCATTTaGGCGTTTAAGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: DSMSLLPKLCKDGSDAAASILVI*AFKALM
Trigger: CATCAAGGCCTTAAACGCCAAAATGACCAATATTGA...GGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTTGCAGTCAATATTGGTCATTTaGGCGTTTAAGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: SLLPKLCKDGSDAAATLQSILVI*AFKALM
Trigger: CATCAAGGCCTTAAACGCCAAAATGACCAATATTGA...CTGCAAGGTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
ENST00000640528.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGTGGTGACGGCAGGGTaGGAGGTATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSVVTAG*EVSVSD
Trigger: GTCAGAGACAGATACCTCCAACCCTGCCGTCACCAC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR CAA 90 bp AATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGACTGTGGTCTGTGTGTCTGCTTaGTTAATAAAGCAACTCTGG +
Preference number: 5 (lower is better)
Translates to: NRPLSWLQKCLSLILGTVVCVSA*LIKQLW
Trigger: CCAGAGTTGCTTTATTAACAAAGCAGACACACAGAC...CACAGTCCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CAA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATAGGAAGGGAGAAAGGTTaGGCTCATTTACACAATGTT +
Preference number: 5 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSIGREKG*AHLHNV
Trigger: AACATTGTGTAAATGAGCCAAACCTTTCTCCCTTCC...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGACTGGATCGAAGAGGTaGTGGGTAAAACAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: GEGASFNIRSVYILIQDLTGSKR*WVKQSP
Trigger: TGGGGACTGTTTTACCCACAACCTCTTCGATCCAGT...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCCTGGACAAAGAGCTaGACAGTTGGCATAATACTT +
Preference number: 5 (lower is better)
Translates to: LLTFPSHRYTVVFLAASSAWTKS*TVGIIL
Trigger: AAGTATTATGCCAACTGTCAAGCTCTTTGTCCAGGC...TGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACAAACCCAATAAAGGATTaGGCAGGACTCAATGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTNPIKD*AGLNGK
Trigger: CTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTAACCCAATAAAGGATTaGGCAGGACTCAATGGAAAG +
Preference number: 5 (lower is better)
Translates to: GLHVPLNIPKPQIYSGVLNPIKD*AGLNGK
Trigger: CTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT...AAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp CAGTCTGGCACCTGCAGGGAATTCAAGTCCAGTTCTAGAGGTTCCAGAATAAGTGGTGTCCTGTTCTTCTaGTACATCAGAATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: QSGTCREFKSSSRGSRISGVLFF*YIRISK
Trigger: CTTTGAAATTCTGATGTACAAGAAGAACAGGACACC...ACTTATTCTGGAACCTCTAGAACTGGACTTGAATTCCCTGCAGGTGCCAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSDILAF*HAWSQL
Trigger: CAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALDILAF*HAWSQL
Trigger: CAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTC...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSARREC*WTFSPF
Trigger: AAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAATGTGAGGGGGAGTCTTaGGTGCCTCTTGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: SLGEGASFNIRSVYILIQCEGES*VPLACT
Trigger: AGTACAAGCAAGAGGCACCAAAGACTCCCCCTCACA...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCATTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTTTTAAATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGTTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: FLNRPLSWLQKCLSLILGFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...CCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AAGGAGAAGCCCCAGAATGATGAACTGCTCATAAGTAGAAGTGTCCTTGAGGTGTGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: KEKPQNDELLISRSVLEVWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...CACCTCAAGGACACTTCTACTTATGAGCAGTTCATCATTCTGGGGCTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: RGGCILQHKISLYPDTRSAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTGCTCCTTGAACACCTaGCGGTTCAGGTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSCSLNT*RFRCTQ
Trigger: CTGCGTGCACCTGAACCGCAAGGTGTTCAAGGAGCA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTGCAGGGCATCCCGCTaGATCACATGCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYCRASR*ITCRSQ
Trigger: CTGTGATCTGCATGTGATCAAGCGGGATGCCCTGCA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTTCCCGCAAGCATCTTaGAAGCGGGCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSFPQAS*KRAQLL
Trigger: CAAAAGCTGGGCCCGCTTCAAAGATGCTTGCGGGAA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCCTCGCCTGACGCTTTaGTCCTCTCGGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSPRLTL*SSREVS
Trigger: AGACACTTCCCGAGAGGACAAAAGCGTCAGGCGAGG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: GNIINGRACTFLLTFPSHLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...GTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTTTTAAATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGTCCCTCAAGCTCTGCTaGTCCCGAGCTAGTTATAAA +
Preference number: 5 (lower is better)
Translates to: FLNRPLSWLQKCLSLILGSLKLC*SRASYK
Trigger: TTTATAACTAGCTCGGGACAAGCAGAGCTTGAGGGA...CCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS-3UTR CAA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCAAGCCTTATACCATCTTaGCCCCTCATACCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGASLIPS*PLIPRG
Trigger: ACCTCTGGGTATGAGGGGCAAAGATGGTATAAGGCT...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATGCAGCTGCCACCTCTTTTTAAAATCATaGAACTCCATTTGGCACCCA +
Preference number: 5 (lower is better)
Translates to: QHVPSSKIVQRRFRCSCHLFLKS*NSIWHP
Trigger: TGGGTGCCAAATGGAGTTCAATGATTTTAAAAAGAG...GTGGCAGCTGCATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACATTGCAAAATCCATCATaGCTGTACACAATAGGCCAG +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTLQNPS*LYTIGQ
Trigger: CTGGCCTATTGTGTACAGCAATGATGGATTTTGCAA...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTGCTTGTCAGTGCTCTaGTCAGCCGAGCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSCLSVL*SAEQTS
Trigger: GGAAGTTTGCTCGGCTGACAAGAGCACTGACAAGCA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTTTGGTGCCTCTTGCTaGTACTGGGGAAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLFGASC*YWGRMS
Trigger: AGACATCCTTCCCCAGTACAAGCAAGAGGCACCAAA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAATTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: KICELLIEQLMDPSDDSEFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACTTGTTGCGGATTGTCTaGGTGTCCTCGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: VDSLQLMHKYSIGILREYLLRIV*VSSSKI
Trigger: GATCTTTGACGAGGACACCAAGACAATCCGCAACAA...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATACAGCCAGCTGTTGTaGCGGATTGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALYSQLL*RIVLVS
Trigger: GGACACCAAGACAATCCGCAACAACAGCTGGCTGTA...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCCATCGACTCAGCCTaGGACACCTTGTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSSIDSA*DTLFQS
Trigger: GGACTGGAACAAGGTGTCCAAGGCTGAGTCGATGGA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTTGGCGTTTAAGGCCTaGATGTCCTCCTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSLAFKA*MSSFSS
Trigger: CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR CAA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATTCAATATTGGTCATTTaGGCGTTTAAGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: IINGRACTFLLTFPSHRYSILVI*AFKALM
Trigger: CATCAAGGCCTTAAACGCCAAAATGACCAATATTGA...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GCTTTGTTAATAAAGCAACTCTGGGCTCATGACCCTTCCTGCCGATGCTCCATAAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: ALLIKQLWAHDPSCRCSISCFSI*VILAFK
Trigger: CTTAAACGCCAAAATGACCAATATTGAGAAACAGCT...TATGGAGCATCGGCAGGAAGGGTCATGAGCCCAGAGTTGCTTTATTAACAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACAAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTSCFSI*VILAFK
Trigger: CTTAAACGCCAAAATGACCAATATTGAGAAACAGCT...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCCCTCAAGCTCTGCTaGTCCCGAGCTAGTTATAAA +
Preference number: 5 (lower is better)
Translates to: LFKNVEKGISSMEGPARSSLKLC*SRASYK
Trigger: TTTATAACTAGCTCGGGACAAGCAGAGCTTGAGGGA...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTGCTGAACTTCTAACCTaGCGTGTCAGTATTTGGGGT +
Preference number: 5 (lower is better)
Translates to: FLAASSADHKNSISSFTLAELLT*RVSIWG
Trigger: ACCCCAAATACTGACACGCAAGGTTAGAAGTTCAGC...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAAATGGCAGGGCCTCTaGACATTGACCGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: KEKENPIKDLAGLNGKSIKWQGL*TLTVGC
Trigger: GCACCCAACGGTCAATGTCAAGAGGCCCTGCCATTT...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CTGCTCATAAGTAGAAGTGTCCTTGAGGTGTCGGTGAAATGTCGGATGTGGACACAGCTTTTTAAATACTaGGGCTATCCTGTAGCATTA +
Preference number: 5 (lower is better)
Translates to: LLISRSVLEVSVKCRMWTQLFKY*GYPVAL
Trigger: TAATGCTACAGGATAGCCCAAGTATTTAAAAAGCTG...TGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTACTTATGAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp AATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGCAGATAAATTCACATaGATTCTTTTGAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: NGRACTFLLTFPSHRYTVADKFT*ILLSCR
Trigger: CCTACAGCTCAAAAGAATCAATGTGAATTTATCTGC...CACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTATACAGTGGTGTTCTaGGCAGCATCCTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: GCILQHKISLYPDTRSVNYTVVF*AASSAD
Trigger: GTCAGCTGAGGATGCTGCCAAGAACACCACTGTATA...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AAGGAGAAGCCCCAGAATGATGAACTGCTCATAAGTAGAAGTGTCCTTGAGGTGACAAAATTAGTATCATaGGACCGCCGAACAATATTC +
Preference number: 5 (lower is better)
Translates to: KEKPQNDELLISRSVLEVTKLVS*DRRTIF
Trigger: GAATATTGTTCGGCGGTCCAATGATACTAATTTTGT...CACCTCAAGGACACTTCTACTTATGAGCAGTTCATCATTCTGGGGCTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp ATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCAGATTGCAAAATCCATCATaGCTGTACACAATAGGCCAG +
Preference number: 5 (lower is better)
Translates to: IPFRQHVPSSKIVQRRFRLQNPS*LYTIGQ
Trigger: CTGGCCTATTGTGTACAGCAATGATGGATTTTGCAA...TCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTTGCAAAATCCATCATaGCTGTACACAATAGGCCAG +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKALQNPS*LYTIGQ
Trigger: CTGGCCTATTGTGTACAGCAATGATGGATTTTGCAA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAGGTGTCCTGTTCTTCTaGTACATCAGAATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTGVLFF*YIRISK
Trigger: CTTTGAAATTCTGATGTACAAGAAGAACAGGACACC...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCCTCAATTGGCTGTTaGAAAGCTGTTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKASSIGC*KAVMSL
Trigger: CAGTGACATAACAGCTTTCAAACAGCCAATTGAGGA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTGCTTGTCAGTGCTCTaGTCAGCCGAGCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSCLSVL*SAEQTS
Trigger: GGAAGTTTGCTCGGCTGACAAGAGCACTGACAAGCA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTTTGGTGCCTCTTGCTaGTACTGGGGAAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYFGASC*YWGRMS
Trigger: AGACATCCTTCCCCAGTACAAGCAAGAGGCACCAAA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAAGTCTTTGGTGCCTCTaGCTTGTACTGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALSLWCL*LVLGKD
Trigger: ATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGACT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACAGTCTTTGGTGCCTCTaGCTTGTACTGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYSLWCL*LVLGKD
Trigger: ATCCTTCCCCAGTACAAGCAAGAGGCACCAAAGACT...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTGTGAGGGGGAGTCTTaGGTGCCTCTTGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSCEGES*VPLACT
Trigger: AGTACAAGCAAGAGGCACCAAAGACTCCCCCTCACA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTCTCAATATTGGTCATTTTGGCGTTTAAGGCCTTGATGTCCTCCTTCAGCTCGACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: FSILVILAFKALMSSFSSTFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...CGAGCTGAAGGAGGACATCAAGGCCTTAAACGCCAAAATGACCAATATTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAA +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSSCCCG*SWCPRQ
Trigger: TTGACGAGGACACCAAGACAATCCGCAACAACAGCT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTAATATAAGGTACAGCCAGCTGTTGTaGCGGATTGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: ENPIKDLAGLNGKSINIRYSQLL*RIVLVS
Trigger: GGACACCAAGACAATCCGCAACAACAGCTGGCTGTA...CCTTATATTAATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTTGGTACAGCCAGCTGTaGTTGCGGATTGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: KEKENPIKDLAGLNGKSIWYSQL*LRIVLV
Trigger: CACCAAGACAATCCGCAACAACAGCTGGCTGTACCA...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTGCTCACTCAATCCTTTaGGCACCTGGTAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSAHSIL*APGRAS
Trigger: TGAAGCTCTACCAGGTGCCAAAAGGATTGAGTGAGC...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GTGGACAGTCTCCAACTGATGCACAAATACAGCATCGGAATATTAAGAGAATACATCCTCTTCCTCAAGTaGTACGTCAGAATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: VDSLQLMHKYSIGILREYILFLK*YVRIRF
Trigger: GAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT...GTATTCTCTTAATATTCCGATGCTGTATTTGTGCATCAGTTGGAGACTGTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYCSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATCATCAATGGAAGGGCCTGCACGTTCCTCTTAACATTCCCAAGCCACAGATATTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: IINGRACTFLLTFPSHRYLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...ATATCTGTGGCTTGGGAATGTTAAGAGGAACGTGCAGGCCCTTCCATTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp ATTGAACAACTAATGGATCCGTCGGATGACTCAGAAGTCACAGATAAAGGGACATCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: IEQLMDPSDDSEVTDKGTSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...TGTCCCTTTATCTGTGACTTCTGAGTCATCCGACGGATCCATTAGTTGTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AGAATACATTCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCAGCCTTATACCATCTTaGCCCCTCATACCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RIHSLGEGASFNIRSVYISLIPS*PLIPRG
Trigger: ACCTCTGGGTATGAGGGGCAAAGATGGTATAAGGCT...GATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGAATGTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACCTCTGTTTCCGTCCTTaGGCTATCTTGTCATGTCCA +
Preference number: 5 (lower is better)
Translates to: GCILQHKISLYPDTRSVNLCFRP*AILSCP
Trigger: TGGACATGACAAGATAGCCAAAGGACGGAAACAGAG...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp CCAAGAACATGTCTGGACTTCAAAGCCTTATACCATCTTTGCCCCTCATACCCATGTACACTAGACAATTaGGTTTCTCAACCAAATGGT +
Preference number: 5 (lower is better)
Translates to: PRTCLDFKALYHLCPSYPCTLDN*VSQPNG
Trigger: ACCATTTGGTTGAGAAACCAAATTGTCTAGTGTACA...TGGGTATGAGGGGCAAAGATGGTATAAGGCTTTGAAGTCCAGACATGTTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GCCACAGATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGCAGATAAATTCACATaGATTCTTTTGAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: ATDIQWCSWQHPQLTTKIADKFT*ILLSCR
Trigger: CCTACAGCTCAAAAGAATCAATGTGAATTTATCTGC...TATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATCTGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GTTCCTCTTAACATTCCCAAGCCACAGATATACAGTGGTGTTCTTGGCAGCATCTTTATTCATGCTCATTaGGACAAAGTGACAGATGCA +
Preference number: 5 (lower is better)
Translates to: VPLNIPKPQIYSGVLGSIFIHAH*DKVTDA
Trigger: TGCATCTGTCACTTTGTCCAAATGAGCATGAATAAA...GATGCTGCCAAGAACACCACTGTATATCTGTGGCTTGGGAATGTTAAGAGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAACAGAATGCTTTAGGTaGTGTGTGGTGGCTCACACC +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALTECFR*CVVAHT
Trigger: GGTGTGAGCCACCACACACAACCTAAAGCATTCTGT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACAGAATGCTTTAGGTaGTGTGTGGTGGCTCACACC +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSTECFR*CVVAHT
Trigger: GGTGTGAGCCACCACACACAACCTAAAGCATTCTGT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAACAAAATTAGTATCATaGGACCGCCGAACAATATTC +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTTKLVS*DRRTIF
Trigger: GAATATTGTTCGGCGGTCCAATGATACTAATTTTGT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCATTGCAAAATCCATCATaGCTGTACACAATAGGCCAG +
Preference number: 5 (lower is better)
Translates to: YKICELLIEQLMDPSDDSLQNPS*LYTIGQ
Trigger: CTGGCCTATTGTGTACAGCAATGATGGATTTTGCAA...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCCCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKAPVRFE*EQFSQR
Trigger: TCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGG...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCATCCTCAATTGGCTGTTaGAAAGCTGTTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: YKICELLIEQLMDPSDDSSSIGC*KAVMSL
Trigger: CAGTGACATAACAGCTTTCAAACAGCCAATTGAGGA...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTTTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTTCATGCGGATAAGTTaGGGGTCAGAAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYFMRIS*GSEITS
Trigger: GGAGGTGATTTCTGACCCCAAACTTATCCGCATGAA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATTGTTGCGGATTGTCTaGGTGTCCTCGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALLLRIV*VSSSKI
Trigger: GATCTTTGACGAGGACACCAAGACAATCCGCAACAA...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTTGTTGCGGATTGTCTaGGTGTCCTCGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYLLRIV*VSSSKI
Trigger: GATCTTTGACGAGGACACCAAGACAATCCGCAACAA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAA +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSSCCCG*SWCPRQ
Trigger: TTGACGAGGACACCAAGACAATCCGCAACAACAGCT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAATGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: KICELLIEQLMDPSDDSEWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGATCCTCTTCCTCAAGTaGTACGTCAGAATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLILFLK*YVRIRF
Trigger: GAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp GGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACATCCTCTTCCTCAAGTaGTACGTCAGAATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: GCILQHKISLYPDTRSVNILFLK*YVRIRF
Trigger: GAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT...GTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAATCCTCTTCCTCAAGTaGTACGTCAGAATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: KSSSRGSRISLICLHENEILFLK*YVRIRF
Trigger: GAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGTGAACTTCTGCTCTGTAAGGACATaGCCCTTCTCCACATCTAGG +
Preference number: 5 (lower is better)
Translates to: CILQHKISLYPDTRSVNFCSVRT*PFSTSR
Trigger: CCTAGATGTGGAGAAGGGCAATGTCCTTACAGAGCA...GAAGTTCACAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCATCAATATTGGTCATTTaGGCGTTTAAGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSSILVI*AFKALM
Trigger: CATCAAGGCCTTAAACGCCAAAATGACCAATATTGA...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp GCACAAATACAGCATCGGAATATTAAGAGAATACATTCATTAGGGGAGGGTGCATCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: AQIQHRNIKRIHSLGEGASLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...TGCACCCTCCCCTAATGAATGTATTCTCTTAATATTCCGATGCTGTATTTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: RGGCILQHKISLYPDTRSSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...AGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTCACTTCCATTTAAGGATTaGGAGAGGAAGCTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: KYPLDSMSLLPKLCKDGSLPFKD*ERKLAE
Trigger: TTCAGCAAGCTTCCTCTCCAAATCCTTAAATGGAAG...TGAACCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TGCAACATTGAAGAGATCAGACAGAATGCTTTAGGTTGTGTGTGGTGGCTCACAAGATGTTTTGCAACATaGAAGAGATCAGACAGAATG +
Preference number: 5 (lower is better)
Translates to: CNIEEIRQNALGCVWWLTRCFAT*KRSDRM
Trigger: CATTCTGTCTGATCTCTTCAATGTTGCAAAACATCT...TGTGAGCCACCACACACAACCTAAAGCATTCTGTCTGATCTCTTCAATGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TACAAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGGTGTCCTGTTCTTCTaGTACATCAGAATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: YKICELLIEQLMDPSDDSGVLFF*YIRISK
Trigger: CTTTGAAATTCTGATGTACAAGAAGAACAGGACACC...TGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTACACTTCCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: FLAASSADHKNSISSFTLPVRFE*EQFSQR
Trigger: TCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGG...AAGTGTAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTCCTCAATTGGCTGTTaGAAAGCTGTTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLSSIGC*KAVMSL
Trigger: CAGTGACATAACAGCTTTCAAACAGCCAATTGAGGA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAATCCTCAATTGGCTGTTaGAAAGCTGTTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: KSSSRGSRISLICLHENESSIGC*KAVMSL
Trigger: CAGTGACATAACAGCTTTCAAACAGCCAATTGAGGA...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGTTTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: LFKNVEKGISSMEGPARSTFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...GGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTTGTTGCGGATTGTCTaGGTGTCCTCGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSLLRIV*VSSSKI
Trigger: GATCTTTGACGAGGACACCAAGACAATCCGCAACAA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGTGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAATCCTCTTCCTCAAGTaGTACGTCAGAATCAGGTTC +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALILFLK*YVRIRF
Trigger: GAACCTGATTCTGACGTACAACTTGAGGAAGAGGAT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCTCATTTATTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: WCSWQHPQLTTKIVSAHLLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...TAAATGAGCTGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTTTTAAATAGACCTCTCAGCTGGCTCCAAAAATGTCTCTCTCTGATTCTGGGGTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: FLNRPLSWLQKCLSLILGLGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...CCCCAGAATCAGAGAGAGACATTTTTGGAGCCAGCTGAGAGGTCTATTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000638357.1
ENST00000640243.1
CDS-3UTR CAA 90 bp AACATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTTAGGAAAAGCCTACTaGAAAATTGTTGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: NMRSQSMILLASAHFEKALGKAY*KIVGHV
Trigger: CACATGACCAACAATTTTCAAGTAGGCTTTTCCTAA...GGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR CAA 90 bp ACAAAATACAAAGGTCTGCAGGGCAATCCCAATGAGAATCAAAGTATAAACATAGCTGAACTTCTAACCTaGCGTGTCAGTATTTGGGGT +
Preference number: 5 (lower is better)
Translates to: TKYKGLQGNPNENQSINIAELLT*RVSIWG
Trigger: ACCCCAAATACTGACACGCAAGGTTAGAAGTTCAGC...TATGTTTATACTTTGATTCTCATTGGGATTGCCCTGCAGACCTTTGTATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638357.1
ENST00000639952.1
CDS-3UTR CAA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAAACTTCAGAAGCAGGTaGAGGAGCATGTTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: KICELLIEQLMDPSDDSENFRSR*RSMFKK
Trigger: TTTCTTAAACATGCTCCTCAACCTGCTTCTGAAGTT...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp GGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGATCTGGCAGATAAATTCACATaGATTCTTTTGAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: GEGASFNIRSVYILIQDLADKFT*ILLSCR
Trigger: CCTACAGCTCAAAAGAATCAATGTGAATTTATCTGC...CAGATCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp GATATACAGTGGTGTTCTTGGCAGCATCCTCAGCTGACCACAAAAATAGTATCAGCAGATAAATTCACATaGATTCTTTTGAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: DIQWCSWQHPQLTTKIVSADKFT*ILLSCR
Trigger: CCTACAGCTCAAAAGAATCAATGTGAATTTATCTGC...TGATACTATTTTTGTGGTCAGCTGAGGATGCTGCCAAGAACACCACTGTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AAGTCCAGTTCTAGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAAACCCAATAAAGGATTaGGCAGGACTCAATGGAAAG +
Preference number: 5 (lower is better)
Translates to: KSSSRGSRISLICLHENENPIKD*AGLNGK
Trigger: CTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTT...TTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCTAGAACTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AGGAAAATACCCTTTAGACAGCATGTCCCTTCTTCCAAAATTGTGCAAAGACGGTTTATTCATGCTCATTaGGACAAAGTGACAGATGCA +
Preference number: 5 (lower is better)
Translates to: RKIPFRQHVPSSKIVQRRFIHAH*DKVTDA
Trigger: TGCATCTGTCACTTTGTCCAAATGAGCATGAATAAA...CCGTCTTTGCACAATTTTGGAAGAAGGGACATGCTGTCTAAAGGGTATTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGATCATTGAACTCCATTaGGCACCCAAAACATGGCAT +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLIIELH*APKTWH
Trigger: ATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGAT...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATGAGAAGCCAAAGTATGATACTACTGGCCTCAGCACATTTTGAGAAAGCCTCTCTCTTTTTAAAATCATaGAACTCCATTTGGCACCCA +
Preference number: 5 (lower is better)
Translates to: MRSQSMILLASAHFEKASLFLKS*NSIWHP
Trigger: TGGGTGCCAAATGGAGTTCAATGATTTTAAAAAGAG...AGAGGCTTTCTCAAAATGTGCTGAGGCCAGTAGTATCATACTTTGGCTTCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATTGCAAAATCCATCATaGCTGTACACAATAGGCCAG +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALLQNPS*LYTIGQ
Trigger: CTGGCCTATTGTGTACAGCAATGATGGATTTTGCAA...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp ATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAGAGGTGTCCTGTTCTTCTaGTACATCAGAATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: IRGGCILQHKISLYPDTRGVLFF*YIRISK
Trigger: CTTTGAAATTCTGATGTACAAGAAGAACAGGACACC...TCTTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAGATCTGTGAACTTCTCATTGAACAACTAATGGATCCGTCGGATGACTCAGAAAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: KICELLIEQLMDPSDDSESCFSI*VILAFK
Trigger: CTTAAACGCCAAAATGACCAATATTGAGAAACAGCT...TTCTGAGTCATCCGACGGATCCATTAGTTGTTCAATGAGAAGTTCACAGATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCCCTTCTTCCAAAATaGTGCAAAGACGGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYSLLPK*CKDGSD
Trigger: ATCTGAACCGTCTTTGCACAATTTTGGAAGAAGGGA...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR CAA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAACTTCCATTTAAGGATTaGGAGAGGAAGCTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: RGSRISLICLHENEVSLELPFKD*ERKLAE
Trigger: TTCAGCAAGCTTCCTCTCCAAATCCTTAAATGGAAG...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTGCAGATAAATTCACATaGATTCTTTTGAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLADKFT*ILLSCR
Trigger: CCTACAGCTCAAAAGAATCAATGTGAATTTATCTGC...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTAAAAATGTTGAGAAGGGAATATCATCAATGGAAGGGCCTGCACGTTCCTCTTTTTATTCATGCTCATTaGGACAAAGTGACAGATGCA +
Preference number: 5 (lower is better)
Translates to: LKMLRREYHQWKGLHVPLFIHAH*DKVTDA
Trigger: TGCATCTGTCACTTTGTCCAAATGAGCATGAATAAA...AAGAGGAACGTGCAGGCCCTTCCATTGATGATATTCCCTTCTCAACATTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TCATTAGGGGAGGGTGCATCCTTCAACATAAGATCAGTTTATATCCTGATACAAACAAAATTAGTATCATaGGACCGCCGAACAATATTC +
Preference number: 5 (lower is better)
Translates to: SLGEGASFNIRSVYILIQTKLVS*DRRTIF
Trigger: GAATATTGTTCGGCGGTCCAATGATACTAATTTTGT...TTGTATCAGGATATAAACTGATCTTATGTTGAAGGATGCACCCTCCCCTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACGGTGTCCTGTTCTTCTaGTACATCAGAATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: LNSIWHPKHGIHYLALYYGVLFF*YIRISK
Trigger: CTTTGAAATTCTGATGTACAAGAAGAACAGGACACC...GTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAACCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: RGSRISLICLHENEVSLEPVRFE*EQFSQR
Trigger: TCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGG...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTAACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALTFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTGGTATCTGTTGGTGTaGGCATACATCTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSWYLLV*AYICWK
Trigger: TTTCCAACAGATGTATGCCAACACCAACAGATACCA...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAATCAATATTGGTCATTTaGGCGTTTAAGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: RGSRISLICLHENEVSLESILVI*AFKALM
Trigger: CATCAAGGCCTTAAACGCCAAAATGACCAATATTGA...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGAGCTGTTTCTCAATATaGGTCATTTTGGCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLSCFSI*VILAFK
Trigger: CTTAAACGCCAAAATGACCAATATTGAGAAACAGCT...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640710.1
CDS-3UTR CAA 90 bp AAATTAGACTTCCTCTTACTTGTATGCCGCCATCTGAGGCTAAATCTAATTATGACAAACACCACCTCATaGACCATCTTAGTTCTTAGA +
Preference number: 5 (lower is better)
Translates to: KLDFLLLVCRHLRLNLIMTNTTS*TILVLR
Trigger: TCTAAGAACTAAGATGGTCAATGAGGTGGTGTTTGT...CATAATTAGATTTAGCCTCAGATGGCGGCATACAAGTAAGAGGAAGTCTAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS-3UTR CAA 90 bp TTGGCACCCAAAACATGGCATTCATTACTTAGCTCTATATTACTCGTCCTTTTGAGATGTTTTGCAACATaGAAGAGATCAGACAGAATG +
Preference number: 5 (lower is better)
Translates to: LAPKTWHSLLSSILLVLLRCFAT*KRSDRM
Trigger: CATTCTGTCTGATCTCTTCAATGTTGCAAAACATCT...CAAAAGGACGAGTAATATAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCATCATTGAACTCCATTaGGCACCCAAAACATGGCAT +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSIIELH*APKTWH
Trigger: ATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGAT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACAAAATTAGTATCATaGGACCGCCGAACAATATTC +
Preference number: 5 (lower is better)
Translates to: KIIELHLAPKTWHSLLSSTKLVS*DRRTIF
Trigger: GAATATTGTTCGGCGGTCCAATGATACTAATTTTGT...AGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCCCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSPVRFE*EQFSQR
Trigger: TCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGG...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp TTTAAAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCACGTTCTCAAAAGCGTaGATGACATCATATGGCAAA +
Preference number: 5 (lower is better)
Translates to: FKIIELHLAPKTWHSLLSTFSKA*MTSYGK
Trigger: TTTGCCATATGATGTCATCAACGCTTTTGAGAACGT...GCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AGAGGTTCCAGAATAAGTCTGATATGCTTGCATGAGAATGAAGTTTCACTTGAATTTATTCATGCTCATTaGGACAAAGTGACAGATGCA +
Preference number: 5 (lower is better)
Translates to: RGSRISLICLHENEVSLEFIHAH*DKVTDA
Trigger: TGCATCTGTCACTTTGTCCAAATGAGCATGAATAAA...TTCAAGTGAAACTTCATTCTCATGCAAGCATATCAGACTTATTCTGGAACCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640625.1
CDS-3UTR CAA 90 bp AAATCATTGAACTCCATTTGGCACCCAAAACATGGCATTCATTACTTAGCTCTACTCTTTTTAAAATCATaGAACTCCATTTGGCACCCA +
Preference number: 5 (lower is better)
Translates to: KSLNSIWHPKHGIHYLALLFLKS*NSIWHP
Trigger: TGGGTGCCAAATGGAGTTCAATGATTTTAAAAAGAG...TAGAGCTAAGTAATGAATGCCATGTTTTGGGTGCCAAATGGAGTTCAATGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367007.5
ENST00000638498.1
ENST00000640710.1
CDS-3UTR CAA 90 bp AAGGAAAAAGAAAACCCAATAAAGGATTTGGCAGGACTCAATGGAAAGAGTATTTGTACACTAGACAATTaGGTTTCTCAACCAAATGGT +
Preference number: 5 (lower is better)
Translates to: KEKENPIKDLAGLNGKSICTLDN*VSQPNG
Trigger: ACCATTTGGTTGAGAAACCAAATTGTCTAGTGTACA...AATACTCTTTCCATTGAGTCCTGCCAAATCCTTTATTGGGTTTTCTTTTTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271751.10
ENST00000639952.1
CDS CCA 72 bp CGGCGGGGATCCGCAGGCAGGGCTGGCGGCTCCCTCTaGCTGCTACCCTCGCGCCCTCTTCGCGCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: RRGSAGRAGGSL*LLPSRPLRASL
Trigger: GAGGGAGGCGCGAAGAGGGCGCGAGGGTAGCAGCCAGAGGGAGCCGCCAGCCCTGCCTGCGGATCCCCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
CDS CCA 72 bp GGCGTCCTGGCGCGGCTTCTTACGACAGCAGGAAACTaGCCTCGGGGCCCGCACGCAGTCCCGGCTCGAAGC +
Preference number: 6 (lower is better)
Translates to: GVLARLLTTAGN*PRGPHAVPARS
Trigger: GCTTCGAGCCGGGACTGCGTGCGGGCCCCGAGGCCAGTTTCCTGCTGTCGTAAGAAGCCGCGCCAGGACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CCA 72 bp TCATCCTCCCAGCAGCTCGGGGTCCGGCGGGCGTCCTaGCGCGGCTTCTTACGACAGCAGGAAACTGGCCTC +
Preference number: 6 (lower is better)
Translates to: SSSQQLGVRRAS*RGFLRQQETGL
Trigger: GAGGCCAGTTTCCTGCTGTCGTAAGAAGCCGCGCCAGGACGCCCGCCGGACCCCGAGCTGCTGGGAGGATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS GCA 72 bp GCCAGGCGGGAGTGCTTGTGGACATTCTCGCCTTTTTaGACGCTTGGAGCCAGCTGCTGCAGGACACCCCTG +
Preference number: 6 (lower is better)
Translates to: ARRECLWTFSPF*TLGASCCRTPL
Trigger: CAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000624583.2
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS GCA 72 bp GCACGCTTGGAGCCAGCTGCTGCAGGACACCCCTGCTaGTTGTCAGTGCTCTTGTCAGCCGAGCAAACTTCC +
Preference number: 6 (lower is better)
Translates to: ARLEPAAAGHPC*LSVLLSAEQTS
Trigger: GGAAGTTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000624583.2
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CCA 72 bp CCCAGCTGTAGGACCTCTGCCAGGCGGGAGTGCTTGTaGACATTCTCGCCTTTTTGCACGCTTGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: PSCRTSARRECL*TFSPFCTLGAS
Trigger: GCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGAGGTCCTACAGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 72 bp TGCCAGGCGGGAGTGCTTGTGGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTGCTGCAGGACACCCCT +
Preference number: 6 (lower is better)
Translates to: CQAGVLVDILAF*HAWSQLLQDTP
Trigger: AGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000624583.2
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 72 bp GAGCCCAGCTGTAGGACCTCTGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTTTGCACGCTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: EPSCRTSARREC*WTFSPFCTLGA
Trigger: GGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGAGGTCCTACAGCTGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 90 bp CTCCATCTCTGCCAGGCGGGAGTGCTTGTGGACATTCTCGCCTTTTaGCACGCTTGGAGCCAGCTGCTGCAGGACACCCCTGCTGCTTGT +
Preference number: 6 (lower is better)
Translates to: LHLCQAGVLVDILAF*HAWSQLLQDTPAAC
Trigger: ACAAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGAGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624583.2
CDS GCA 72 bp TTTGCACGCTTGGAGCCAGCTGCTGCAGGACACCCCTaGTGCTTGTCAGTGCTCTTGTCAGCCGAGCAAACT +
Preference number: 6 (lower is better)
Translates to: FARLEPAAAGHP*CLSVLLSAEQT
Trigger: AGTTTGCTCGGCTGACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000624583.2
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS GCA 72 bp TCTGAGCCCAGCTGTAGGACCTCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCTTTTTGCACGCTTGGA +
Preference number: 6 (lower is better)
Translates to: SEPSCRTSARRE*LWTFSPFCTLG
Trigger: TCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGAGGTCCTACAGCTGGGCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CCA 72 bp GACCAAGACTCCATCTCTGCCAGGCGGGAGTGCTTGTaGACATTCTCGCCTTTTTGCACGCTTGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: DQDSISARRECL*TFSPFCTLGAS
Trigger: GCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGAGATGGAGTCTTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624583.2
CDS GCA 72 bp ACATTCTCGCCTTTTTGCACGCTTGGAGCCAGCTGCTaGAGGACACCCCTGCTGCTTGTCAGTGCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: TFSPFCTLGASC*RTPLLLVSALV
Trigger: GACAAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000624583.2
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS GCA 72 bp TGGACATTCTCGCCTTTTTGCACGCTTGGAGCCAGCTaGTGCAGGACACCCCTGCTGCTTGTCAGTGCTCTT +
Preference number: 6 (lower is better)
Translates to: WTFSPFCTLGAS*CRTPLLLVSAL
Trigger: AAGAGCACTGACAAGCAGCAGGGGTGTCCTGCAGCAGCTGGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000624583.2
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 72 bp ACAGACCAAGACTCCATCTCTGCCAGGCGGGAGTGCTaGTGGACATTCTCGCCTTTTTGCACGCTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: TDQDSISARREC*WTFSPFCTLGA
Trigger: GGCTCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGAGATGGAGTCTTGGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624583.2
CDS GCA 72 bp GTGACAGACCAAGACTCCATCTCTGCCAGGCGGGAGTaGTTGTGGACATTCTCGCCTTTTTGCACGCTTGGA +
Preference number: 6 (lower is better)
Translates to: VTDQDSISARRE*LWTFSPFCTLG
Trigger: TCCAAGCGTGCAAAAAGGCGAGAATGTCCACAAGCACTCCCGCCTGGCAGAGATGGAGTCTTGGTCTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624583.2
CDS CCA 72 bp GCTGCTGATGCCCTGACTCTCTCTCCCCTCCAGTGGTaGTGGAATCTGATCAGCAAAACCAATCTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: AADALTLSPLQW*WNLISKTNLPW
Trigger: CCAGGGAAGATTGGTTTTGCTGATCAGATTCCACCACCACTGGAGGGGAGAGAGAGTCAGGGCATCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638498.1
ENST00000639754.1
CDS CCA 72 bp CAGGCTGCTGATGCCCTGACTCTCTCTCCCCTCCAGTaGTGGTGGAATCTGATCAGCAAAACCAATCTTCCC +
Preference number: 6 (lower is better)
Translates to: QAADALTLSPLQ*WWNLISKTNLP
Trigger: GGGAAGATTGGTTTTGCTGATCAGATTCCACCACCACTGGAGGGGAGAGAGAGTCAGGGCATCAGCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271751.10
ENST00000638498.1
ENST00000639754.1
CDS CCA 72 bp GAGCTGAACAGGCTGCTGACTCTCTCTCCCCTCCAGTaGTGGTGGAATCTGATCAGCAAAACCAATCTTCCC +
Preference number: 6 (lower is better)
Translates to: ELNRLLTLSPLQ*WWNLISKTNLP
Trigger: GGGAAGATTGGTTTTGCTGATCAGATTCCACCACCACTGGAGGGGAGAGAGAGTCAGCAGCCTGTTCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639385.1
CDS TCA 72 bp GACAGAATTCTTGCTGGGACCACCTTCCCACTTCCCTaGGCCAGACCCATTAAACTGGTAAGGGGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: DRILAGTTFPLP*ARPIKLVRGAN
Trigger: ATTGGCACCCCTTACCAGTTTAATGGGTCTGGCTCAGGGAAGTGGGAAGGTGGTCCCAGCAAGAATTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CCA 72 bp CATAGAGAAGTGCTGACTCTCTCTCCCCTCCAGTGGTaGTGGAATCTGATCAGCAAAACCAATCTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: HREVLTLSPLQW*WNLISKTNLPW
Trigger: CCAGGGAAGATTGGTTTTGCTGATCAGATTCCACCACCACTGGAGGGGAGAGAGAGTCAGCACTTCTCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS CCA 72 bp TGGCATAGAGAAGTGCTGACTCTCTCTCCCCTCCAGTaGTGGTGGAATCTGATCAGCAAAACCAATCTTCCC +
Preference number: 6 (lower is better)
Translates to: WHREVLTLSPLQ*WWNLISKTNLP
Trigger: GGGAAGATTGGTTTTGCTGATCAGATTCCACCACCACTGGAGGGGAGAGAGAGTCAGCACTTCTCTATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640522.1
CDS CAA 72 bp CCATCGCTAGTTGGTACAGCCAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAAAGATCTCATAGTCCC +
Preference number: 6 (lower is better)
Translates to: PSLVGTASCCCG*SWCPRQRSHSP
Trigger: GGGACTATGAGATCTTTGACGAGGACACCAAGACAATCCGCAACAACAGCTGGCTGTACCAACTAGCGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639385.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 72 bp GTGCCAATGTCCATCGCTAGTTGGTACAGCCAGCTGTaGTTGCGGATTGTCTTGGTGTCCTCGTCAAAGATC +
Preference number: 6 (lower is better)
Translates to: VPMSIASWYSQL*LRIVLVSSSKI
Trigger: GATCTTTGACGAGGACACCAAGACAATCCGCAACAACAGCTGGCTGTACCAACTAGCGATGGACATTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639385.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 90 bp TGCCAATGTCCATCGCTAGTTGGTACAGCCAGCTGTTGTTGCGGATaGTCTTGGTGTCCTCGTCAAAGATCTCATAGTCCCCAATGCTGT +
Preference number: 6 (lower is better)
Translates to: CQCPSLVGTASCCCG*SWCPRQRSHSPQCC
Trigger: ACAGCATTGGGGACTATGAGATCTTTGACGAGGACACCAAGACAATCCGCAACAACAGCTGGCTGTACCAACTAGCGATGGACATTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639385.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CCA 72 bp CTAGTTGGTACAGCCAGCTGTTGTTGCGGATTGTCTTaGTGTCCTCGTCAAAGATCTCATAGTCCCCAATGC +
Preference number: 6 (lower is better)
Translates to: LVGTASCCCGLS*CPRQRSHSPQC
Trigger: GCATTGGGGACTATGAGATCTTTGACGAGGACACCAAGACAATCCGCAACAACAGCTGGCTGTACCAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639385.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 72 bp CCAATGTCCATCGCTAGTTGGTACAGCCAGCTGTTGTaGCGGATTGTCTTGGTGTCCTCGTCAAAGATCTCA +
Preference number: 6 (lower is better)
Translates to: PMSIASWYSQLL*RIVLVSSSKIS
Trigger: TGAGATCTTTGACGAGGACACCAAGACAATCCGCAACAACAGCTGGCTGTACCAACTAGCGATGGACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639385.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS TCA 72 bp GTTTCATGCGTTCTTCCTCTTCACGTTTCACATCGCTaGTCTTCCGGAACACAATCTAGAATGGCCACCACC +
Preference number: 6 (lower is better)
Translates to: VSCVLPLHVSHR*SSGTQSRMATT
Trigger: GGTGGTGGCCATTCTAGATTGTGTTCCGGAAGATCAGCGATGTGAAACGTGAAGAGGAAGAACGCATGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638357.1
CDS GCA 72 bp CAATGTCCATCGCTAGTTGGTACAGCCAGCTGTTGTTaGGGATTGTCTTGGTGTCCTCGTCAAAGATCTCAT +
Preference number: 6 (lower is better)
Translates to: QCPSLVGTASCC*GLSWCPRQRSH
Trigger: ATGAGATCTTTGACGAGGACACCAAGACAATCCGCAACAACAGCTGGCTGTACCAACTAGCGATGGACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639385.1
ENST00000639754.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 72 bp AGGCTGCTGATGCCCTCATCCACGTTCTCAAAAGCGTaGATGACATCATATGGCAAACAGGACAGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: RLLMPSSTFSKA*MTSYGKQDRRS
Trigger: TGACCTTCTGTCCTGTTTGCCATATGATGTCATCAACGCTTTTGAGAACGTGGATGAGGGCATCAGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367007.5
ENST00000638357.1
ENST00000638960.1
ENST00000639952.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CCA 72 bp TGGTGGTGGAATCTGATCAGCAAAACCAATCTTCCCTaGATCACCCATAAAGGCACTAACCTCATCCACGTT +
Preference number: 6 (lower is better)
Translates to: WWWNLISKTNLP*ITHKGTNLIHV
Trigger: AACGTGGATGAGGTTAGTGCCTTTATGGGTGATCCAGGGAAGATTGGTTTTGCTGATCAGATTCCACCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271751.10
ENST00000638498.1
ENST00000639385.1
ENST00000639754.1
ENST00000640522.1
CDS CAA 72 bp GGCATAGAGAAGTGCTCATCCACGTTCTCAAAAGCGTaGATGACATCATATGGCAAACAGGACAGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: GIEKCSSTFSKA*MTSYGKQDRRS
Trigger: TGACCTTCTGTCCTGTTTGCCATATGATGTCATCAACGCTTTTGAGAACGTGGATGAGCACTTCTCTATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640243.1
CDS TCA 72 bp CCATCATTGCTGTACACAATAGGCCAGTCCACTATCTaGGCATTCCCCAACACAAAATTAGTATCATTGGAC +
Preference number: 6 (lower is better)
Translates to: PSLLYTIGQSTI*AFPNTKLVSLD
Trigger: GTCCAATGATACTAATTTTGTGTTGGGGAATGCTCAGATAGTGGACTGGCCTATTGTGTACAGCAATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640044.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640566.1
ENST00000640710.1
ENST00000640890.1
CDS TCA 72 bp GAAATCACCTCCCCTGCTGGTCCAACAAAGGTGGTATaGAAATTGAGCACAATGTCCACCAAAAAGATAACA +
Preference number: 6 (lower is better)
Translates to: EITSPAGPTKVV*KLSTMSTKKIT
Trigger: TGTTATCTTTTTGGTGGACATTGTGCTCAATTTTCATACCACCTTTGTTGGACCAGCAGGGGAGGTGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638357.1
ENST00000638498.1
ENST00000638960.1
ENST00000639385.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 90 bp GTACATCAGAATTTCAAAGGAATTCATCTCATAGTTCTCAAATGTTaGCCGCACTTTTTCAATCGTGTCTTTATCAGTCAGCTCCCCATA +
Preference number: 6 (lower is better)
Translates to: VHQNFKGIHLIVLKC*PHFFNRVFISQLPI
Trigger: TATGGGGAGCTGACTGATAAAGACACGATTGAAAAAGTGCGGCAAACATTTGAGAACTATGAGATGAATTCCTTTGAAATTCTGATGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640044.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640566.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 72 bp AAAGAAATAAAACCACTTTATCCTGTTCGTTTCGAATaGGAGCAATTTTCACAAAGAACCACACAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: KEIKPLYPVRFE*EQFSQRTTQVS
Trigger: GGACACCTGTGTGGTTCTTTGTGAAAATTGCTCCAATTCGAAACGAACAGGATAAAGTGGTTTTATTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000624583.2
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640710.1
ENST00000640890.1
CDS CAA 72 bp AATTTCAAAGGAATTCATCTCATAGTTCTCAAATGTTaGCCGCACTTTTTCAATCGTGTCTTTATCAGTCAG +
Preference number: 6 (lower is better)
Translates to: NFKGIHLIVLKC*PHFFNRVFISQ
Trigger: CTGACTGATAAAGACACGATTGAAAAAGTGCGGCAAACATTTGAGAACTATGAGATGAATTCCTTTGAAATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000271751.10
ENST00000367007.5
ENST00000638498.1
ENST00000638960.1
ENST00000639754.1
ENST00000639952.1
ENST00000640044.1
ENST00000640243.1
ENST00000640522.1
ENST00000640528.1
ENST00000640566.1
ENST00000640710.1
ENST00000640890.1