Pregenerated sensors for KCNE1B (Homo sapiens)
Ensembl gene IDs: ENSG00000276289Ensembl transcript IDs: ENST00000618699.2, ENST00000622690.4
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTGGGATGGGGATGCGCATCCATCCTCGGCCTTCCTTGGTTTGTaGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGCATGGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: SWDGDAHPSSAFLGL*LCHCTLCLCHGMVP Trigger: GGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAAGGAAGGCCGAGGATGGATGCGCATCCCCATCCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR GCA 90 bp | GATGCGCATCCATCCTCGGCCTTCCTTGGTTTGTGGCTGTGTCACTaGACCCTCTGCCTCTGTCACGGCATGGTGCCCTCCCTATGCATC | + |
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Preference number: 1 (lower is better) Translates to: DAHPSSAFLGLWLCH*TLCLCHGMVPSLCI Trigger: GATGCATAGGGAGGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAAGGAAGGCCGAGGATGGATGCGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 90 bp | CCTGTGGGAGAGGAGCCTTCCTGGCTTCTTCCCGACTTCTTGGGATaGGGATGCGCATCCATCCTCGGCCTTCCTTGGTTTGTGGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PVGEEPSWLLPDFLG*GCASILGLPWFVAV Trigger: CACAGCCACAAACCAAGGAAGGCCGAGGATGGATGCGCATCCCCATCCCAAGAAGTCGGGAAGAAGCCAGGAAGGCTCCTCTCCCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR GCA 90 bp | GGAGAGGAGCCTTCCTGGCTTCTTCCCGACTTCTTGGGATGGGGATaGGCATCCATCCTCGGCCTTCCTTGGTTTGTGGCTGTGTCACTG | + |
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Preference number: 1 (lower is better) Translates to: GEEPSWLLPDFLGWG*ASILGLPWFVAVSL Trigger: CAGTGACACAGCCACAAACCAAGGAAGGCCGAGGATGGATGCGCATCCCCATCCCAAGAAGTCGGGAAGAAGCCAGGAAGGCTCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 90 bp | AGCAGGGCTGTGCTTCCTCTGAAACCTGTGGGAGAGGAGCCTTCCTaGCTTCTTCCCGACTTCTTGGGATGGGGATGCGCATCCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: SRAVLPLKPVGEEPS*LLPDFLGWGCASIL Trigger: GAGGATGGATGCGCATCCCCATCCCAAGAAGTCGGGAAGAAGCCAGGAAGGCTCCTCTCCCACAGGTTTCAGAGGAAGCACAGCCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR GCA 90 bp | GGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTGGCTCTTTGAGTaGCCCATTCTTTCCCAGTCTCATAACTGCTCTCCACCTCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: GGSTSPRPRCVWLFE*PILSQSHNCSPPPP Trigger: TGGAGGAGGTGGAGAGCAGTTATGAGACTGGGAAAGAATGGGGCACTCAAAGAGCCACACACATCTGGGCCTGGGCGACGTGGATCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 90 bp | AAGGAAGAGTGGAGTGGATTTCTCTCTCCTGTAAATCTGGCCTGGTaGGTGGTAAGGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: KEEWSGFLSPVNLAW*VVRRIHVAQAQMCV Trigger: CACACACATCTGGGCCTGGGCGACGTGGATCCTCCTTACCACCCACCAGGCCAGATTTACAGGAGAGAGAAATCCACTCCACTCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 90 bp | CTTAAGGAAGAGTGGAGTGGATTTCTCTCTCCTGTAAATCTGGCCTaGTGGGTGGTAAGGAGGATCCACGTCGCCCAGGCCCAGATGTGT | + |
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Preference number: 1 (lower is better) Translates to: LKEEWSGFLSPVNLA*WVVRRIHVAQAQMC Trigger: ACACATCTGGGCCTGGGCGACGTGGATCCTCCTTACCACCCACCAGGCCAGATTTACAGGAGAGAGAAATCCACTCCACTCTTCCTTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR GCA 90 bp | CTGGTCATGAATCCTGGACACGGCAGGCAAGGTGTGGTGTCCATATaGATTATTCGGGTGGGGCAAAGATCACAGCTCTCACTAGACTTT | + |
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Preference number: 1 (lower is better) Translates to: LVMNPGHGRQGVVSI*IIRVGQRSQLSLDF Trigger: AAAGTCTAGTGAGAGCTGTGATCTTTGCCCCACCCGAATAATGCATATGGACACCACACCTTGCCTGCCGTGTCCAGGATTCATGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 90 bp | GTATCCCAATACTGTATGGCAGTAGGCTGCCAGAGTATCCTAAGCTaGGTGGCTTCAACAACAGGTACTGACTCACAGTTCTGGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: VSQYCMAVGCQSILS*VASTTGTDSQFWRP Trigger: TGGCCTCCAGAACTGTGAGTCAGTACCTGTTGTTGAAGCCACCCAGCTTAGGATACTCTGGCAGCCTACTGCCATACAGTATTGGGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR TCA 90 bp | AGGCTGCCAGAGTATCCTAAGCTGGGTGGCTTCAACAACAGGTACTaGCTCACAGTTCTGGAGGCCAAAAGTTTGAATTCAAGCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: RLPEYPKLGGFNNRY*LTVLEAKSLNSSRA Trigger: AGCCCTGCTTGAATTCAAACTTTTGGCCTCCAGAACTGTGAGTCAGTACCTGTTGTTGAAGCCACCCAGCTTAGGATACTCTGGCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR TCA 90 bp | GTGTCTGAATTTCCCTCTTCCGATAAGGACTCCAGTCATATTGGGTaGGGGCCCACCCCAATGACCTCATCTCAACTAGATCATCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: VSEFPSSDKDSSHIG*GPTPMTSSQLDHLQ Trigger: TTGCAGATGATCTAGTTGAGATGAGGTCATTGGGGTGGGCCCTCACCCAATATGACTGGAGTCCTTATCGGAAGAGGGAAATTCAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTTGTGGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGCATGGTGCCCTAGGCCCAGATGTGTGTaGCTCTTTGAGTGCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: LVCGCVTAPSASVTAWCPRPRCV*LFECPI Trigger: AATGGGGCACTCAAAGAGCCACACACATCTGGGCCT...AGGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAAGAAGCTTAGAACAGTACATGGTGCATAGCAAAGACTCTGTGTATGTGTCTGTCACGGCATGGTaGCCTCCCTATGCATCTGTG | + |
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Preference number: 2 (lower is better) Translates to: FLRSLEQYMVHSKDSVYVSVTAW*PPYASV Trigger: CACAGATGCATAGGGAGGGCACCATGCCGTGACAGA...CACATACACAGAGTCTTTGCTATGCACCATGTACTGTTCTAAGCTTCTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR TCA 90 bp | TTTTTAAGAAGCTTAGAACAGTACATGGTGCATAGCAAAGACTCTGTGTATGTGATGTGTGTGGCTCTTTaGGTGCCCCATTCTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FLRSLEQYMVHSKDSVYVMCVAL*VPHSFP Trigger: TGGGAAAGAATGGGGCACTCAAAGAGCCACACACAT...CACATACACAGAGTCTTTGCTATGCACCATGTACTGTTCTAAGCTTCTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAAGAAGCTTAGAACAGTACATGGTGCATAGCAAAGACTCTGTGTATGTGGTGTGGCTCTTTGAGTaGCCCATTCTTTCCCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: FLRSLEQYMVHSKDSVYVVWLFE*PILSQS Trigger: AGACTGGGAAAGAATGGGGCACTCAAAGAGCCACAC...CACATACACAGAGTCTTTGCTATGCACCATGTACTGTTCTAAGCTTCTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | GGGGATGCGCATCCATCCTCGGCCTTCCTTGGTTTGTaGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGC | + |
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Preference number: 3 (lower is better) Translates to: GDAHPSSAFLGL*LCHCTLCLCHG Trigger: GCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAAGGAAGGCCGAGGATGGATGCGCATCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | TTGGGATGGGGATGCGCATCCATCCTCGGCCTTCCTTaGTTTGTGGCTGTGTCACTGCACCCTCTGCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LGWGCASILGLP*FVAVSLHPLPL Trigger: CAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAAGGAAGGCCGAGGATGGATGCGCATCCCCATCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | TGGGAGAGGAGCCTTCCTGGCTTCTTCCCGACTTCTTaGGATGGGGATGCGCATCCATCCTCGGCCTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: WERSLPGFFPTS*DGDAHPSSAFL Trigger: AAGGAAGGCCGAGGATGGATGCGCATCCCCATCCCAAGAAGTCGGGAAGAAGCCAGGAAGGCTCCTCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR GCA 72 bp | CCTTCCTGGCTTCTTCCCGACTTCTTGGGATGGGGATaGGCATCCATCCTCGGCCTTCCTTGGTTTGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: PSWLLPDFLGWG*ASILGLPWFVA Trigger: AGCCACAAACCAAGGAAGGCCGAGGATGGATGCGCATCCCCATCCCAAGAAGTCGGGAAGAAGCCAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | TGGAGTGGATTTCTCTCTCCTGTAAATCTGGCCTGGTaGGTGGTAAGGAGGATCCACGTCGCCCAGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: WSGFLSPVNLAW*VVRRIHVAQAQ Trigger: CTGGGCCTGGGCGACGTGGATCCTCCTTACCACCCACCAGGCCAGATTTACAGGAGAGAGAAATCCACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | GAGTGGAGTGGATTTCTCTCTCCTGTAAATCTGGCCTaGTGGGTGGTAAGGAGGATCCACGTCGCCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: EWSGFLSPVNLA*WVVRRIHVAQA Trigger: GGCCTGGGCGACGTGGATCCTCCTTACCACCCACCAGGCCAGATTTACAGGAGAGAGAAATCCACTCCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | GGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGCATaGTGCCCTCCCTATGCATCTGTGTCTGAATTTCCC | + |
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Preference number: 3 (lower is better) Translates to: GCVTAPSASVTA*CPPYASVSEFP Trigger: GGGAAATTCAGACACAGATGCATAGGGAGGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | GAGGAGCCTTCCTGGCTTCTTCCCGACTTCTTGGGATaGGGATGCGCATCCATCCTCGGCCTTCCTTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: EEPSWLLPDFLG*GCASILGLPWF Trigger: AAACCAAGGAAGGCCGAGGATGGATGCGCATCCCCATCCCAAGAAGTCGGGAAGAAGCCAGGAAGGCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | GTGCTTCCTCTGAAACCTGTGGGAGAGGAGCCTTCCTaGCTTCTTCCCGACTTCTTGGGATGGGGATGCGCA | + |
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Preference number: 3 (lower is better) Translates to: VLPLKPVGEEPS*LLPDFLGWGCA Trigger: TGCGCATCCCCATCCCAAGAAGTCGGGAAGAAGCCAGGAAGGCTCCTCTCCCACAGGTTTCAGAGGAAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTTGTGGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGCATGGTGCCCTGATGTGTGTGGCTCTTaGAGTGCCCCATTCTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: LVCGCVTAPSASVTAWCPDVCGS*SAPFFP Trigger: GGGAAAGAATGGGGCACTCAAAGAGCCACACACATC...AGGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR GCA 72 bp | AATCCTGGACACGGCAGGCAAGGTGTGGTGTCCATATaGATTATTCGGGTGGGGCAAAGATCACAGCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: NPGHGRQGVVSI*IIRVGQRSQLS Trigger: TGAGAGCTGTGATCTTTGCCCCACCCGAATAATGCATATGGACACCACACCTTGCCTGCCGTGTCCAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | TACTGTATGGCAGTAGGCTGCCAGAGTATCCTAAGCTaGGTGGCTTCAACAACAGGTACTGACTCACAGTTC | + |
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Preference number: 3 (lower is better) Translates to: YCMAVGCQSILS*VASTTGTDSQF Trigger: GAACTGTGAGTCAGTACCTGTTGTTGAAGCCACCCAGCTTAGGATACTCTGGCAGCCTACTGCCATACAGTA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR CCA 72 bp | TTACTTGGACATTACAGTCTTCACTTCCATGCCTACTaGCCAGGGCTTAGTCACACAACCTTGCTAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LLGHYSLHFHAY*PGLSHTTLLAA Trigger: TGCAGCTAGCAAGGTTGTGTGACTAAGCCCTGGCCAGTAGGCATGGAAGTGAAGACTGTAATGTCCAAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR CAA 90 bp | TTTTTAAGAAGCTTAGAACAGTACATGGTGCATAGCAAAGACTCTGTGTATGTGAGGACTCCAGTCATATaGGGTGAGGGCCCACCCCAA | + |
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Preference number: 3 (lower is better) Translates to: FLRSLEQYMVHSKDSVYVRTPVI*GEGPPQ Trigger: TTGGGGTGGGCCCTCACCCAATATGACTGGAGTCCT...CACATACACAGAGTCTTTGCTATGCACCATGTACTGTTCTAAGCTTCTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR CAA 90 bp | TTTTTAAGAAGCTTAGAACAGTACATGGTGCATAGCAAAGACTCTGTGTATGTGGATGTGTGTGGCTCTTaGAGTGCCCCATTCTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: FLRSLEQYMVHSKDSVYVDVCGS*SAPFFP Trigger: GGGAAAGAATGGGGCACTCAAAGAGCCACACACATC...CACATACACAGAGTCTTTGCTATGCACCATGTACTGTTCTAAGCTTCTTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR CAA 90 bp | TTTTTAAGAAGCTTAGAACAGTACATGGTGCATAGCAAAGACTCTGTGTATGTGCTGGAGGCCAAAAGTTaGAATTCAAGCAGGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: FLRSLEQYMVHSKDSVYVLEAKS*NSSRAV Trigger: CACAGCCCTGCTTGAATTCAAACTTTTGGCCTCCAG...CACATACACAGAGTCTTTGCTATGCACCATGTACTGTTCTAAGCTTCTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR CAA 90 bp | TTTTTAAGAAGCTTAGAACAGTACATGGTGCATAGCAAAGACTCTGTGTATGTGAAGGTACCTGTCTTTTaGGGGGATACAATTCATCTC | + |
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Preference number: 3 (lower is better) Translates to: FLRSLEQYMVHSKDSVYVKVPVF*GDTIHL Trigger: GAGATGAATTGTATCCCCCAAAAAGACAGGTACCTT...CACATACACAGAGTCTTTGCTATGCACCATGTACTGTTCTAAGCTTCTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| 3UTR-3UTR CAA 90 bp | TTTTTAAGAAGCTTAGAACAGTACATGGTGCATAGCAAAGACTCTGTGTATGTGCTTTCCAAGGATTACTaGGACATTACAGTCTTCACT | + |
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Preference number: 3 (lower is better) Translates to: FLRSLEQYMVHSKDSVYVLSKDY*DITVFT Trigger: AGTGAAGACTGTAATGTCCAAGTAATCCTTGGAAAG...CACATACACAGAGTCTTTGCTATGCACCATGTACTGTTCTAAGCTTCTTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000618699.2 ENST00000622690.4 |
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| CDS-3UTR GCA 90 bp | AAGGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTGGCTCTTTGAGTGCCCCATTGTGGCTGTGTCACTaGACCCTCTGCCTCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: KEDPRRPGPDVCGSLSAPLWLCH*TLCLCH Trigger: GTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAA...TGGGGCACTCAAAGAGCCACACACATCTGGGCCTGGGCGACGTGGATCCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR GCA 90 bp | AAGGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTGGCTCTTTGAGTGCCCCATTCTTGGGATGGGGATaGGCATCCATCCTCGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KEDPRRPGPDVCGSLSAPFLGWG*ASILGL Trigger: AAGGCCGAGGATGGATGCGCATCCCCATCCCAAGAA...TGGGGCACTCAAAGAGCCACACACATCTGGGCCTGGGCGACGTGGATCCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR GCA 90 bp | TTGGTTTGTGGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGCATGGTGCCCTTCTGTCACGGCATGGTaGCCTCCCTATGCATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LVCGCVTAPSASVTAWCPSVTAW*PPYASV Trigger: CACAGATGCATAGGGAGGGCACCATGCCGTGACAGA...AGGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR TCA 90 bp | AAGGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTGGCTCTTTGAGTGCCCCATCCCAGGCACACCTCTaGATATCCTTGGCTATTTCC | + |
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Preference number: 4 (lower is better) Translates to: KEDPRRPGPDVCGSLSAPSQAHL*ISLAIS Trigger: GGAAATAGCCAAGGATATTCAGAGGTGTGCCTGGGA...TGGGGCACTCAAAGAGCCACACACATCTGGGCCTGGGCGACGTGGATCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR TCA 90 bp | AAGGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTGGCTCTTTGAGTGCCCCATGGAGGCCAAAAGTTTaGATTCAAGCAGGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: KEDPRRPGPDVCGSLSAPWRPKV*IQAGLC Trigger: GCACAGCCCTGCTTGAATTCAAACTTTTGGCCTCCA...TGGGGCACTCAAAGAGCCACACACATCTGGGCCTGGGCGACGTGGATCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR GCA 90 bp | AAGGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTGGCTCTTTGAGTGCCCCATCCCAGTCTCATAACTaGTCTCCACCTCCTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: KEDPRRPGPDVCGSLSAPSQSHN*SPPPPH Trigger: ATGTGGAGGAGGTGGAGAGCAGTTATGAGACTGGGA...TGGGGCACTCAAAGAGCCACACACATCTGGGCCTGGGCGACGTGGATCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR GCA 90 bp | AAGGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTGGCTCTTTGAGTGCCCCAGGTGTGGTGTCCATATaGATTATTCGGGTGGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: KEDPRRPGPDVCGSLSAPGVVSI*IIRVGQ Trigger: TTGCCCCACCCGAATAATGCATATGGACACCACACC...TGGGGCACTCAAAGAGCCACACACATCTGGGCCTGGGCGACGTGGATCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR TCA 90 bp | TTGGTTTGTGGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGCATGGTGCCCTTTCAACAACAGGTACTaGCTCACAGTTCTGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LVCGCVTAPSASVTAWCPFNNRY*LTVLEA Trigger: GGCCTCCAGAACTGTGAGTCAGTACCTGTTGTTGAA...AGGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR GCA 90 bp | AAGGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTGGCTCTTTGAGTGCCCCATCTGGGAAATGCAGCTaGTATTCTCAGAGGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: KEDPRRPGPDVCGSLSAPSGKCS*YSQRPC Trigger: ACATGGCCTCTGAGAATAGCAGCTGCATTTCCCAGA...TGGGGCACTCAAAGAGCCACACACATCTGGGCCTGGGCGACGTGGATCCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR GCA 90 bp | TTGGTTTGTGGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGCATGGTGCCCTAGGGAGTCTGGGAAATaGAGCTGCTATTCTCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LVCGCVTAPSASVTAWCPRESGK*SCYSQR Trigger: CCTCTGAGAATAGCAGCTGCATTTCCCAGACTCCCT...AGGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR GCA 90 bp | TTGGTTTGTGGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGCATGGTGCCCTGTATATGAGTGTATGTaGCTGTGTGTTTTCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LVCGCVTAPSASVTAWCPVYECM*LCVFRE Trigger: CTCCCTGAAAACACACAGGCACATACACTCATATAC...AGGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR TCA 90 bp | TTGGTTTGTGGCTGTGTCACTGCACCCTCTGCCTCTGTCACGGCATGGTGCCCTAAGTTCTTTCTAGATTaGGGTGTGTATGTGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: LVCGCVTAPSASVTAWCPKFFLD*GVYVCL Trigger: TAGACACACATACACACCTCAATCTAGAAAGAACTT...AGGGCACCATGCCGTGACAGAGGCAGAGGGTGCAGTGACACAGCCACAAACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR TCA 90 bp | TTTTTAAGAAGCTTAGAACAGTACATGGTGCATAGCAAAGACTCTGTGTATGTGCCAATTAGGTCACATTaGAGGTACCTGTCTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: FLRSLEQYMVHSKDSVYVPIRSH*RYLSFW Trigger: CCAAAAAGACAGGTACCTTCAATGTGACCTAATTGG...CACATACACAGAGTCTTTGCTATGCACCATGTACTGTTCTAAGCTTCTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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| CDS-3UTR CAA 90 bp | AAGGAGGATCCACGTCGCCCAGGCCCAGATGTGTGTGGCTCTTTGAGTGCCCCAGATGTGTGTGGCTCTTaGAGTGCCCCATTCTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: KEDPRRPGPDVCGSLSAPDVCGS*SAPFFP Trigger: GGGAAAGAATGGGGCACTCAAAGAGCCACACACATC...TGGGGCACTCAAAGAGCCACACACATCTGGGCCTGGGCGACGTGGATCCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622690.4 |
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