RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCND3 (Homo sapiens)

Ensembl gene IDs: ENSG00000171385

Ensembl transcript IDs: ENST00000302127.5, ENST00000315987.6, ENST00000369697.5

Found 701 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAGACAGGGACAGACAAAGGGTAAGGATTGCCGTGTGGTCACTTaGCAGCTCTGCACAGGTCAGCTGGGCAGTGGGGGCCCAGGCTCA +
Preference number: 1 (lower is better)
Translates to: GRQGQTKGKDCRVVT*QLCTGQLGSGGPGS
Trigger: TGAGCCTGGGCCCCCACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAATCCTTACCCTTTGTCTGTCCCTGTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp GCAGCTCTGCACAGGTCAGCTGGGCAGTGGGGGCCCAGGCTCAGTTaGCCTCACCCACCTGGGGGAATGGAGAGAGAACTCAGCAATAAC +
Preference number: 1 (lower is better)
Translates to: AALHRSAGQWGPRLS*PHPPGGMERELSNN
Trigger: GTTATTGCTGAGTTCTCTCTCCATTCCCCCAGGTGGGTGAGGTCAACTGAGCCTGGGCCCCCACTGCCCAGCTGACCTGTGCAGAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 90 bp GGACAGACAAAGGGTAAGGATTGCCGTGTGGTCACTTGGCAGCTCTaGACAGGTCAGCTGGGCAGTGGGGGCCCAGGCTCAGTTGACCTC +
Preference number: 1 (lower is better)
Translates to: GQTKGKDCRVVTWQL*TGQLGSGGPGSVDL
Trigger: GAGGTCAACTGAGCCTGGGCCCCCACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAATCCTTACCCTTTGTCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp AGAGACAAGGGAGACAGGGACAGACAAAGGGTAAGGATTGCCGTGTaGTCACTTGGCAGCTCTGCACAGGTCAGCTGGGCAGTGGGGGCC +
Preference number: 1 (lower is better)
Translates to: RDKGDRDRQRVRIAV*SLGSSAQVSWAVGA
Trigger: GGCCCCCACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAATCCTTACCCTTTGTCTGTCCCTGTCTCCCTTGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 90 bp GAGGTACAGAGACAAGGGAGACAGGGACAGACAAAGGGTAAGGATTaGCGTGTGGTCACTTGGCAGCTCTGCACAGGTCAGCTGGGCAGT +
Preference number: 1 (lower is better)
Translates to: EVQRQGRQGQTKGKD*RVVTWQLCTGQLGS
Trigger: ACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAATCCTTACCCTTTGTCTGTCCCTGTCTCCCTTGTCTCTGTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp GCCCTCTCTGGAGAAAACTACTCCCGGGGCCTCTTGGAAGGGCTCTaGATGGGCTTTATGGTGGGTCTTGAAGGAAGGGTCCATAGCAAG +
Preference number: 1 (lower is better)
Translates to: ALSGENYSRGLLEGL*MGFMVGLEGRVHSK
Trigger: CTTGCTATGGACCCTTCCTTCAAGACCCACCATAAAGCCCATCCAGAGCCCTTCCAAGAGGCCCCGGGAGTAGTTTTCTCCAGAGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp CTGCCTTCTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTaGACCTACAGGGTCAATCGAGCTGGGGTCATAGGGAAGCCCACG +
Preference number: 1 (lower is better)
Translates to: LPSAHILVRCHLETF*TYRVNRAGVIGKPT
Trigger: CGTGGGCTTCCCTATGACCCCAGCTCGATTGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAGAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp TCTCTGGAGAAAACTACTCCCGGGGCCTCTTGGAAGGGCTCTGGATaGGCTTTATGGTGGGTCTTGAAGGAAGGGTCCATAGCAAGGTGC +
Preference number: 1 (lower is better)
Translates to: SLEKTTPGASWKGSG*ALWWVLKEGSIARC
Trigger: GCACCTTGCTATGGACCCTTCCTTCAAGACCCACCATAAAGCCCATCCAGAGCCCTTCCAAGAGGCCCCGGGAGTAGTTTTCTCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp CAGGCTTACCCTTCCACAGCCTCTGTGTGGGAGTTGCCTCTGGTTTaGTATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTC +
Preference number: 1 (lower is better)
Translates to: QAYPSTASVWELPLV*YKSEESWSPYHCPL
Trigger: GAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAACCAGAGGCAACTCCCACACAGAGGCTGTGGAAGGGTAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp GCACACAGGCTTACCCTTCCACAGCCTCTGTGTGGGAGTTGCCTCTaGTTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCC +
Preference number: 1 (lower is better)
Translates to: AHRLTLPQPLCGSCL*FDISQRNLGPRTTA
Trigger: GGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAACCAGAGGCAACTCCCACACAGAGGCTGTGGAAGGGTAAGCCTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp TCACTAACCCTGAGGCCCACCTACTCTGCTACAAGCAGTGAACAATaGTTAGGAGGATTCCAGAAATGCTGCCCCCAGCTCCACCAGGGT +
Preference number: 1 (lower is better)
Translates to: SLTLRPTYSATSSEQ*LGGFQKCCPQLHQG
Trigger: ACCCTGGTGGAGCTGGGGGCAGCATTTCTGGAATCCTCCTAACCATTGTTCACTGCTTGTAGCAGAGTAGGTGGGCCTCAGGGTTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp TCATGTATTTCAGAGCCCAGGCTACAGAGACTGCAGCAAGGTGGCTaGGTGTTGGGAAGGGCAGGAAAGGACTTGTCACTAACCCTGAGG +
Preference number: 1 (lower is better)
Translates to: SCISEPRLQRLQQGG*VLGRAGKDLSLTLR
Trigger: CCTCAGGGTTAGTGACAAGTCCTTTCCTGCCCTTCCCAACACCCAGCCACCTTGCTGCAGTCTCTGTAGCCTGGGCTCTGAAATACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp GGACTTGTCACTAACCCTGAGGCCCACCTACTCTGCTACAAGCAGTaGACAATGGTTAGGAGGATTCCAGAAATGCTGCCCCCAGCTCCA +
Preference number: 1 (lower is better)
Translates to: GLVTNPEAHLLCYKQ*TMVRRIPEMLPPAP
Trigger: TGGAGCTGGGGGCAGCATTTCTGGAATCCTCCTAACCATTGTTCACTGCTTGTAGCAGAGTAGGTGGGCCTCAGGGTTAGTGACAAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 90 bp CTTGAGGCACACAGGCTTACCCTTCCACAGCCTCTGTGTGGGAGTTaGCTCTGGTTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACC +
Preference number: 1 (lower is better)
Translates to: LEAHRLTLPQPLCGS*LWFDISQRNLGPRT
Trigger: GGTACGGGGACCAAGATTCCTCTGACTTATATCAAACCAGAGGCAACTCCCACACAGAGGCTGTGGAAGGGTAAGCCTGTGTGCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp GACAACTTGGCCTCTTTGCTGCTCTTGGTCTTGTATTTTCCTCACTaGGGTCTCCAGAAACGACTGTTATTTGGTCTGAGTCTGAGGCTC +
Preference number: 1 (lower is better)
Translates to: DNLASLLLLVLYFPH*GLQKRLLFGLSLRL
Trigger: GAGCCTCAGACTCAGACCAAATAACAGTCGTTTCTGGAGACCCCAGTGAGGAAAATACAAGACCAAGAGCAGCAAAGAGGCCAAGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp CTGATGTGTTTCAGGATCATTGGGATCCAGGTAGAGACAGATGGCTaGACACAGAAACAGCTAGGGGTAAGCAGAGAGGTACAGAGACAA +
Preference number: 1 (lower is better)
Translates to: LMCFRIIGIQVETDG*TQKQLGVSREVQRQ
Trigger: TTGTCTCTGTACCTCTCTGCTTACCCCTAGCTGTTTCTGTGTCCAGCCATCTGTCTCTACCTGGATCCCAATGATCCTGAAACACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp TACAGAGTTTGTTTCCAGAGATCTTGGTTCACGGTGGTTCTGAATTaGATACTTCCCTCCCCCACGTCACCACCCTGGAAATCCAGGTAT +
Preference number: 1 (lower is better)
Translates to: YRVCFQRSWFTVVLN*ILPSPTSPPWKSRY
Trigger: ATACCTGGATTTCCAGGGTGGTGACGTGGGGGAGGGAAGTATTCAATTCAGAACCACCGTGAACCAAGATCTCTGGAAACAAACTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 90 bp GCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTaGGTGGCAGTGATGAAGAAGGCTTTACTGATGTGTTTCAGGATC +
Preference number: 1 (lower is better)
Translates to: AVAFTQIELPGTSLL*VAVMKKALLMCFRI
Trigger: GATCCTGAAACACATCAGTAAAGCCTTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp TTTACTGATGTGTTTCAGGATCATTGGGATCCAGGTAGAGACAGATaGCTGGACACAGAAACAGCTAGGGGTAAGCAGAGAGGTACAGAG +
Preference number: 1 (lower is better)
Translates to: FTDVFQDHWDPGRDR*LDTETARGKQRGTE
Trigger: CTCTGTACCTCTCTGCTTACCCCTAGCTGTTTCTGTGTCCAGCCATCTGTCTCTACCTGGATCCCAATGATCCTGAAACACATCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp GATTCCAGAAATGCTGCCCCCAGCTCCACCAGGGTGCAAGCTAGTTaGATAGATATGTTGTCCAGGTGTTCAAGAAATAATCTTCACTCC +
Preference number: 1 (lower is better)
Translates to: DSRNAAPSSTRVQAS*IDMLSRCSRNNLHS
Trigger: GGAGTGAAGATTATTTCTTGAACACCTGGACAACATATCTATTCAACTAGCTTGCACCCTGGTGGAGCTGGGGGCAGCATTTCTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp AATAGTACAGAGTTTGTTTCCAGAGATCTTGGTTCACGGTGGTTCTaGATTGAATACTTCCCTCCCCCACGTCACCACCCTGGAAATCCA +
Preference number: 1 (lower is better)
Translates to: NSTEFVSRDLGSRWF*IEYFPPPRHHPGNP
Trigger: TGGATTTCCAGGGTGGTGACGTGGGGGAGGGAAGTATTCAATTCAGAACCACCGTGAACCAAGATCTCTGGAAACAAACTCTGTACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 90 bp CCTAAACTCTCCCAATTTTTGCTTCACTCTTTCCTCCTCTGCAGTTaGATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGT +
Preference number: 1 (lower is better)
Translates to: PKLSQFLLHSFLLCS*IHTDRTPRHKSVVR
Trigger: ACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAGGAAAGAGTGAAGCAAAAATTGGGAGAGTTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 90 bp CTCCAAAGCATCACTGCTCTCAGAGGCAGTGGGTGTGGTAGAAAATaGATTAGACTAATAGCCAAAAGACTCGTGTTCTGGTCTCAGATC +
Preference number: 1 (lower is better)
Translates to: LQSITALRGSGCGRK*IRLIAKRLVFWSQI
Trigger: GATCTGAGACCAGAACACGAGTCTTTTGGCTATTAGTCTAATGCATTTTCTACCACACCCACTGCCTCTGAGAGCAGTGATGCTTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 90 bp CTTACCCCTAAACTCTCCCAATTTTTGCTTCACTCTTTCCTCCTCTaGAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTT +
Preference number: 1 (lower is better)
Translates to: LTPKLSQFLLHSFLL*SCIHTDRTPRHKSV
Trigger: AACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAGGAAAGAGTGAAGCAAAAATTGGGAGAGTTTAGGGGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 90 bp GATATGTTGTCCAGGTGTTCAAGAAATAATCTTCACTCCTTTGCTTaGACAGAGGTGATGAGGCTTCTCCCCCATTTCAGCATCTTCAGG +
Preference number: 1 (lower is better)
Translates to: DMLSRCSRNNLHSFA*TEVMRLLPHFSIFR
Trigger: CCTGAAGATGCTGAAATGGGGGAGAAGCCTCATCACCTCTGTGCAAGCAAAGGAGTGAAGATTATTTCTTGAACACCTGGACAACATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp GTATTGACATATAAGACTATGTCTCCAATTACAGTATGGATTCTTTaGTGGATCTTCTCCAAAGCATCACTGCTCTCAGAGGCAGTGGGT +
Preference number: 1 (lower is better)
Translates to: VLTYKTMSPITVWIL*WIFSKASLLSEAVG
Trigger: ACCCACTGCCTCTGAGAGCAGTGATGCTTTGGAGAAGATCCATCAAAGAATCCATACTGTAATTGGAGACATAGTCTTATATGTCAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 90 bp CCCTGGAAATCCAGGTATGAAAAATATAAGCAAGCCTCAGAGCAGTaGAATATAATGTGGAGGAAAAATCCTAGGACAAGATGTCTTAAG +
Preference number: 1 (lower is better)
Translates to: PWKSRYEKYKQASEQ*NIMWRKNPRTRCLK
Trigger: CTTAAGACATCTTGTCCTAGGATTTTTCCTCCACATTATATTGCACTGCTCTGAGGCTTGCTTATATTTTTCATACCTGGATTTCCAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp TATGCAGTTAGTCCTGAGCTTGGCACTAGTTATGAAAATAGGAGATaGAGGAGAAATAGTACAGAGTTTGTTTCCAGAGATCTTGGTTCA +
Preference number: 1 (lower is better)
Translates to: YAVSPELGTSYENRR*RRNSTEFVSRDLGS
Trigger: TGAACCAAGATCTCTGGAAACAAACTCTGTACTATTTCTCCTTCATCTCCTATTTTCATAACTAGTGCCAAGCTCAGGACTAACTGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 90 bp AATATAATGTGGAGGAAAAATCCTAGGACAAGATGTCTTAAGTCCTaGATTGCAATAATGGTTCTGCCACTAACTTGTCATGTGAACTTG +
Preference number: 1 (lower is better)
Translates to: NIMWRKNPRTRCLKS*IAIMVLPLTCHVNL
Trigger: CAAGTTCACATGACAAGTTAGTGGCAGAACCATTATTGCAATCCAGGACTTAAGACATCTTGTCCTAGGATTTTTCCTCCACATTATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 90 bp GTGATTTCCAAGGGCTGTGTCCAAGTAGTATTGACATATACGTATTaGCATATAAGACTATGTCTCCAATTACAGTATGGATTCTTTGAT +
Preference number: 1 (lower is better)
Translates to: VISKGCVQVVLTYTY*HIRLCLQLQYGFFD
Trigger: ATCAAAGAATCCATACTGTAATTGGAGACATAGTCTTATATGTCAATACGTATATGTCAATACTACTTGGACACAGCCCTTGGAAATCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 90 bp CCCGGGGCCTCTTGGAAGGGCTCTGGATGGGCTTTATGGTGGGTCTaGAAGGAAGGGTCCATAGCAAGGTGCCCTAATGACCGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PGASWKGSGWALWWV*KEGSIARCPNDRLR
Trigger: CCTCAGCCGGTCATTAGGGCACCTTGCTATGGACCCTTCCTTCAAGACCCACCATAAAGCCCATCCAGAGCCCTTCCAAGAGGCCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGACCACCCACCAACATaGCAGTCCCCTTCATTCCCC +
Preference number: 2 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRDHPPT*QSPSFP
Trigger: GGGGAATGAAGGGGACTGGCATGTTGGTGGGTGGTC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
3UTR-3UTR TCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGGGGCCCAGGCTCAGTTaGCCTCACCCACCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: WHIPELTASQVLAICLFKGPRLS*PHPPGG
Trigger: TCCCCCAGGTGGGTGAGGTCAACTGAGCCTGGGCCC...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAGCCCTAATGACCGGCTaGGGCTGCGAGCCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSALMTG*GCEPWV
Trigger: GACCCAGGGCTCGCAGCCTCAGCCGGTCATTAGGGC...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGCCCTAATGACCGGCTaGGGCTGCGAGCCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKALMTG*GCEPWV
Trigger: GACCCAGGGCTCGCAGCCTCAGCCGGTCATTAGGGC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAAGGGAGTGGTCTCAGTaGCCACCCACCAACATGCCA +
Preference number: 2 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLREWSQ*PPTNMP
Trigger: TGGCATGTTGGTGGGTGGTCACTGAGACCACTCCCT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
3UTR-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGACCACCCACCAACATaGCAGTCCCCTTCATTCCCC +
Preference number: 2 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLDHPPT*QSPSFP
Trigger: GGGGAATGAAGGGGACTGGCATGTTGGTGGGTGGTC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
3UTR-3UTR TCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGGGCCCAGGCTCAGTTaGCCTCACCCACCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKGPRLS*PHPPGG
Trigger: TCCCCCAGGTGGGTGAGGTCAACTGAGCCTGGGCCC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATCCACGCTAGCAGCGTaGACCTCAGGTGCCCCTTTG +
Preference number: 2 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEESTLAA*TSGAPL
Trigger: CAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGACCACCCACCAACATaGCAGTCCCCTTCATTCCCC +
Preference number: 2 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKDHPPT*QSPSFP
Trigger: GGGGAATGAAGGGGACTGGCATGTTGGTGGGTGGTC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGTCACTTGGCAGCTCTaGACAGGTCAGCTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKVTWQL*TGQLGS
Trigger: ACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGAC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAAGGGAGTGGTCTCAGTaGCCACCCACCAACATGCCA +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKREWSQ*PPTNMP
Trigger: TGGCATGTTGGTGGGTGGTCACTGAGACCACTCCCT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGGCACATACCAGAGTTaGCCGCGTCTCAGGTGTTGG +
Preference number: 2 (lower is better)
Translates to: FDISQRNLGPRTTALSGEGTYQS*PRLRCW
Trigger: CCAACACCTGAGACGCGGTCAACTCTGGTATGTGCC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGTCACTTGGCAGCTCTaGACAGGTCAGCTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKVTWQL*TGQLGS
Trigger: ACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGAC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGGGTCCATAGCAAGGTaGCCTAATGACCGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: FDISQRNLGPRTTALSGEGSIAR*PNDRLR
Trigger: CCTCAGCCGGTCATTAGGGCACCTTGCTATGGACCC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGAGCGTGAACCTCAGGTaGCCCTTTGCTACCTCTTTT +
Preference number: 2 (lower is better)
Translates to: WHIPELTASQVLAICLFKSVNLR*PFATSF
Trigger: AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCT...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAATCCAGGCCCTGTCCTaGCACATAGCCTATATCCCC +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKIQALS*HIAYIP
Trigger: GGGGATATAGGCTATGTGCCAGGACAGGGCCTGGAT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAACTTCTGCCCACATTCTaGTTAGGTGCCACCTCGAAA +
Preference number: 2 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKLLPTF*LGATSK
Trigger: TTTCGAGGTGGCACCTAACCAGAATGTGGGCAGAAG...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCATTGACCTCACCCACCTaGGGGAATGGAGAGAGAACT +
Preference number: 2 (lower is better)
Translates to: IPELTASQVLAICLFKIPLTSPT*GNGERT
Trigger: AGTTCTCTCTCCATTCCCCCAGGTGGGTGAGGTCAA...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATTGACCTCACCCACCTaGGGGAATGGAGAGAGAACT +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKLTSPT*GNGERT
Trigger: AGTTCTCTCTCCATTCCCCCAGGTGGGTGAGGTCAA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAAAGTCAGAGGAATCTTaGTCCCCGTACCACTGCCCT +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKKSEES*SPYHCP
Trigger: AGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 90 bp GTACAGAGTTTGTTTCCAGAGATCTTGGTTCACGGTGGTTCTGAATaGAATACTTCCCTCCCCCACGTCACCACCCTGGAAATCCAGGTA +
Preference number: 2 (lower is better)
Translates to: VQSLFPEILVHGGSE*NTSLPHVTTLEIQV
Trigger: TACCTGGATTTCCAGGGTGGTGACGTGGGGGAGGGAAGTATTCAATTCAGAACCACCGTGAACCAAGATCTCTGGAAACAAACTCTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACTCCACGCTAGCAGCGTaGACCTCAGGTGCCCCTTTG +
Preference number: 2 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHSTLAA*TSGAPL
Trigger: CAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGA...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATTGAAGCATTTTTCTTaGGGCACACAGGCTTACCCT +
Preference number: 2 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKLKHFS*GTQAYP
Trigger: AGGGTAAGCCTGTGTGCCTCAAGAAAAATGCTTCAA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAAGGGTGCAAGCTAGTTaGATAGATATGTTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSRVQAS*IDMLSR
Trigger: CCTGGACAACATATCTATTCAACTAGCTTGCACCCT...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGGCACAAGTCTGTTGTaGGTGGCAGTGATGAAGAAG +
Preference number: 2 (lower is better)
Translates to: FDISQRNLGPRTTALSGEGTSLL*VAVMKK
Trigger: CTTCTTCATCACTGCCACGCACAACAGACTTGTGCC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAACCCACCTGGGGGAATaGAGAGAGAACTCAGCAATA +
Preference number: 2 (lower is better)
Translates to: IPELTASQVLAICLFKIPTHLGE*RENSAI
Trigger: TATTGCTGAGTTCTCTCTCCATTCCCCCAGGTGGGT...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAAACTGCAAACACGAGTaGTTCCAACCCCAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: FDISQRNLGPRTTALSGENCKHE*FQPQGK
Trigger: CTTCCCTTGGGGTTGGAACCACTCGTGTTTGCAGTT...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAAACTGCAAACACGAGTaGTTCCAACCCCAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKNCKHE*FQPQGK
Trigger: CTTCCCTTGGGGTTGGAACCACTCGTGTTTGCAGTT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 90 bp TCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTaGTGCGTGGCAGTGATGAAGAAGGCTTTACTGATGTGTTTCAGG +
Preference number: 2 (lower is better)
Translates to: SAVAFTQIELPGTSL*CVAVMKKALLMCFR
Trigger: CCTGAAACACATCAGTAAAGCCTTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACTTCCTCTGGCCCCAGTaGGATGCAGTATCACAGGGC +
Preference number: 2 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHFLWPQ*DAVSQG
Trigger: GCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAA...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTTCCTCCTCTGCAGTTaGATTCACACAGATAGAACT +
Preference number: 2 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDFLLCS*IHTDRT
Trigger: AGTTCTATCTGTGTGAATGCAACTGCAGAGGAGGAA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCATTCCTCCTCTGCAGTTaGATTCACACAGATAGAACT +
Preference number: 2 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSFLLCS*IHTDRT
Trigger: AGTTCTATCTGTGTGAATGCAACTGCAGAGGAGGAA...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAACTTCACTCCTTTGCTTaGACAGAGGTGATGAGGCTT +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKLHSFA*TEVMRL
Trigger: AAGCCTCATCACCTCTGTGCAAGCAAAGGAGTGAAG...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAATTCTTTCCCAGAAACTaGAACTGCAAACACGAGTGG +
Preference number: 2 (lower is better)
Translates to: FDISQRNLGPRTTALSGEFFPRN*NCKHEW
Trigger: CCACTCGTGTTTGCAGTTTCAGTTTCTGGGAAAGAA...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAAACAACTTGGCCTCTTTaGTGCTCTTGGTCTTGTATT +
Preference number: 2 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEETTWPL*CSWSCI
Trigger: AATACAAGACCAAGAGCAGCAAAGAGGCCAAGTTGT...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCACACTCTTTCCTCCTCTaGAGTTGCATTCACACAGAT +
Preference number: 2 (lower is better)
Translates to: IPELTASQVLAICLFKIPHSFLL*SCIHTD
Trigger: ATCTGTGTGAATGCAACTGCAGAGGAGGAAAGAGTG...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACATCCAGGCCCTGTCCTaGCACATAGCCTATATCCCC +
Preference number: 2 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHIQALS*HIAYIP
Trigger: GGGGATATAGGCTATGTGCCAGGACAGGGCCTGGAT...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGAAACGACTGTTATTTaGTCTGAGTCTGAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKETTVI*SESEAP
Trigger: AGGAGCCTCAGACTCAGACCAAATAACAGTCGTTTC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACCAAAATGCATTGTTTTaGTTCAAAGGTGTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDQNALF*FKGVGS
Trigger: GGACCCAACACCTTTGAACCAAAACAATGCATTTTG...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGGGATGGGCTTTATGGTaGGTCTTGAAGGAAGGGTCC +
Preference number: 2 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLGWALW*VLKEGS
Trigger: GGACCCTTCCTTCAAGACCCACCATAAAGCCCATCC...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAACAAGCAGTGAACAATaGTTAGGAGGATTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSTSSEQ*LGGFQK
Trigger: TTTCTGGAATCCTCCTAACCATTGTTCACTGCTTGT...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAGGGGAGAGAAATTCTTaGCCTACAATTAAACAGCTA +
Preference number: 2 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSGERNS*PTIKQL
Trigger: TAGCTGTTTAATTGTAGGCCAAGAATTTCTCTCCCC...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 90 bp TCACTGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTaGCCTTTTCAAGATTCCAGTGTGATAAATCTGTTCATTCCCTTT +
Preference number: 2 (lower is better)
Translates to: SLAHTRVDRVSGVGD*PFQDSSVINLFIPF
Trigger: AAAGGGAATGAACAGATTTATCACACTGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATAGGGAGTGGTCTCAGTaGCCACCCACCAACATGCCA +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNREWSQ*PPTNMP
Trigger: TGGCATGTTGGTGGGTGGTCACTGAGACCACTCCCT...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGAACTCAGCAATAACTaGCTTCTTAGCCTAAAAGCT +
Preference number: 2 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVELSNN*LLSLKA
Trigger: AGCTTTTAGGCTAAGAAGTCAGTTATTGCTGAGTTC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGAGTTGCCTCTGGTTTaGTATAAGTCAGAGGAATCT +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKELPLV*YKSEES
Trigger: AGATTCCTCTGACTTATATCAAACCAGAGGCAACTC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGTTGGTTCAAAGGTGTTaGGTCCATGGAGAAAAACAT +
Preference number: 2 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVLVQRC*VHGEKH
Trigger: ATGTTTTTCTCCATGGACCCAACACCTTTGAACCAA...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGCCGCGTCTCAGGTGTTaGCGATTTGCCTTTTCAAGA +
Preference number: 2 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLPRLRC*RFAFSR
Trigger: TCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGG...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 90 bp ATAGGAGATGAAGGAGAAATAGTACAGAGTTTGTTTCCAGAGATCTaGGTTCACGGTGGTTCTGAATTGAATACTTCCCTCCCCCACGTC +
Preference number: 2 (lower is better)
Translates to: IGDEGEIVQSLFPEI*VHGGSELNTSLPHV
Trigger: GACGTGGGGGAGGGAAGTATTCAATTCAGAACCACCGTGAACCAAGATCTCTGGAAACAAACTCTGTACTATTTCTCCTTCATCTCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGAACTCAGCAATAACTaGCTTCTTAGCCTAAAAGCT +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKELSNN*LLSLKA
Trigger: AGCTTTTAGGCTAAGAAGTCAGTTATTGCTGAGTTC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACATTGGTACAGTCAGGTaGTTTCCAAGGGCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHIGTVR*FPRAVS
Trigger: GGACACAGCCCTTGGAAATCACCTGACTGTACCAAT...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCACAAAATGCATTGTTTTaGTTCAAAGGTGTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: IPELTASQVLAICLFKIPQNALF*FKGVGS
Trigger: GGACCCAACACCTTTGAACCAAAACAATGCATTTTG...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGGGGAGAGAAATTCTTaGCCTACAATTAAACAGCTA +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKGERNS*PTIKQL
Trigger: TAGCTGTTTAATTGTAGGCCAAGAATTTCTCTCCCC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGTTTAGATGGCTGTGGTaGGGAGAGAAATTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLFRWLW*GEKFLA
Trigger: GGCCAAGAATTTCTCTCCCCACCACAGCCATCTAAA...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGGAAGTGGCATGACGTaGGCTCTGAACGTGAAGTGG +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNGSGMT*ALNVKW
Trigger: CCACTTCACGTTCAGAGCCCACGTCATGCCACTTCC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGTTCTTTCCCAGAAACTaGAACTGCAAACACGAGTGG +
Preference number: 2 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLFFPRN*NCKHEW
Trigger: CCACTCGTGTTTGCAGTTTCAGTTTCTGGGAAAGAA...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAACCCAGTCAGATCTTATaGAGCATAACTAAGATACTT +
Preference number: 2 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKPSQIL*SITKIL
Trigger: AAGTATCTTAGTTATGCTTCATAAGATCTGACTGGG...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACGTGGTTCATGAACTATaGAAGCTCAAGGGTCATGGC +
Preference number: 2 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHVVHEL*KLKGHG
Trigger: GCCATGACCCTTGAGCTTTCATAGTTCATGAACCAC...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATTTTGAGACGGAGTCTTaGTGTGTCACCTGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNFETES*CVTWAG
Trigger: TCCAGCCCAGGTGACACAGCAAGACTCCGTCTCAAA...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATTCTCCAAAGCATCACTaGTCTCAGAGGCAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNSPKHH*SQRQWV
Trigger: CACCCACTGCCTCTGAGAGCAGTGATGCTTTGGAGA...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACGGACCAGAAGTGAGCTaGATCTTTTCTCTGGCTAAG +
Preference number: 2 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHGPEVS*IFSLAK
Trigger: CTTAGCCAGAGAAAAGATCCAGCTCACTTCTGGTCC...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATCCGCGTCTCAGGTGTTaGCGATTTGCCTTTTCAAGA +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNPRLRC*RFAFSR
Trigger: TCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGG...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGCTGGATCTTTTCTCTaGCTAAGGCTACAGTGGAGG +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNAGSFL*LRLQWR
Trigger: CCTCCACTGTAGCCTTAGCCAGAGAAAAGATCCAGC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATTTGCTTGTGACAACTTaGCCTCTTTGCTGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNLLVTT*PLCCSW
Trigger: CCAAGAGCAGCAAAGAGGCCAAGTTGTCACAAGCAA...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATCCATGTTGGCCAAGTTaGTCTTCAACTCCTGACTTC +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNPCWPS*SSTPDF
Trigger: GAAGTCAGGAGTTGAAGACCAACTTGGCCAACATGG...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGGGGTTTCACCATGTTaGCCAAGTTGGTCTTCAACT +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNGVSPC*PSWSST
Trigger: AGTTGAAGACCAACTTGGCCAACATGGTGAAACCCC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATTGGTCTTTTAGGAAGTaGCATGACGTGGGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNWSFRK*HDVGSE
Trigger: TTCAGAGCCCACGTCATGCCACTTCCTAAAAGACCA...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATAAAGCTCAAGGGTCATaGCTATTGGCCCCCAGAAAA +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNKAQGS*LLAPRK
Trigger: TTTTCTGGGGGCCAATAGCCATGACCCTTGAGCTTT...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGTTTCTACCCAGAGAATaGTGGTTTCCAAAGTATGGT +
Preference number: 2 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLFLPRE*WFPKYG
Trigger: ACCATACTTTGGAAACCACCATTCTCTGGGTAGAAA...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR TCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGTACTTGCTTTTGCTTTaGAGCATTTTTCTTGAGGCA +
Preference number: 2 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLYLLLL*SIFLEA
Trigger: TGCCTCAAGAAAAATGCTTCAAAGCAAAAGCAAGTA...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATAGGGGTCCACCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNRGPPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGTGGACCCCT...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATCTGAGTGGGACTGAATaGAATAGGTGGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNLSGTE*NRWFWE
Trigger: TTCCCAAAACCACCTATTCCATTCAGTCCCACTCAG...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 90 bp ATCTATTGGTCTTTTGAAAGGGAGTCTATGCAGTTAGTCCTGAGCTaGGCACTAGTTATGAAAATAGGAGATGAAGGAGAAATAGTACAG +
Preference number: 2 (lower is better)
Translates to: IYWSFERESMQLVLS*ALVMKIGDEGEIVQ
Trigger: CTGTACTATTTCTCCTTCATCTCCTATTTTCATAACTAGTGCCAAGCTCAGGACTAACTGCATAGACTCCCTTTCAAAAGACCAATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGCTGTCATTAAATAACTaGATGACCTTGAACAAGTCA +
Preference number: 2 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLLSLNN*MTLNKS
Trigger: TGACTTGTTCAAGGTCATGCAGTTATTTAATGACAG...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACCTGATGTGTTTAGGTTaGTTGTGTGTATACACATGT +
Preference number: 2 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHLMCLG*LCVYTC
Trigger: ACATGTGTATACACACAACCAACCTAAACACATCAG...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR GCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGGGTGTGGTAGAAAATaGATTAGACTAATAGCCAAA +
Preference number: 2 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNGCGRK*IRLIAK
Trigger: TTTGGCTATTAGTCTAATGCATTTTCTACCACACCC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 72 bp AAGGGTAAGGATTGCCGTGTGGTCACTTGGCAGCTCTaGACAGGTCAGCTGGGCAGTGGGGGCCCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: KGKDCRVVTWQL*TGQLGSGGPGS
Trigger: TGAGCCTGGGCCCCCACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAATCCTTACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 72 bp GGACAGACAAAGGGTAAGGATTGCCGTGTGGTCACTTaGCAGCTCTGCACAGGTCAGCTGGGCAGTGGGGGC +
Preference number: 3 (lower is better)
Translates to: GQTKGKDCRVVT*QLCTGQLGSGG
Trigger: GCCCCCACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAATCCTTACCCTTTGTCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 72 bp CCCGGGGCCTCTTGGAAGGGCTCTGGATGGGCTTTATaGTGGGTCTTGAAGGAAGGGTCCATAGCAAGGTGC +
Preference number: 3 (lower is better)
Translates to: PGASWKGSGWAL*WVLKEGSIARC
Trigger: GCACCTTGCTATGGACCCTTCCTTCAAGACCCACCATAAAGCCCATCCAGAGCCCTTCCAAGAGGCCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAGGGGCCCAGGCTCAGTaGACCTCACCCACCTGGGGG +
Preference number: 3 (lower is better)
Translates to: IPELTASQVLAICLFKIPGAQAQ*TSPTWG
Trigger: CCCCCAGGTGGGTGAGGTCAACTGAGCCTGGGCCCC...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 72 bp GGAGAAAACTACTCCCGGGGCCTCTTGGAAGGGCTCTaGATGGGCTTTATGGTGGGTCTTGAAGGAAGGGTC +
Preference number: 3 (lower is better)
Translates to: GENYSRGLLEGL*MGFMVGLEGRV
Trigger: GACCCTTCCTTCAAGACCCACCATAAAGCCCATCCAGAGCCCTTCCAAGAGGCCCCGGGAGTAGTTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 72 bp AGACAAGGGAGACAGGGACAGACAAAGGGTAAGGATTaGCGTGTGGTCACTTGGCAGCTCTGCACAGGTCAG +
Preference number: 3 (lower is better)
Translates to: RQGRQGQTKGKD*RVVTWQLCTGQ
Trigger: CTGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAATCCTTACCCTTTGTCTGTCCCTGTCTCCCTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 72 bp TCCTTCCGTTCTCCCCTCACTGGCACATACCAGAGTTaGCCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCA +
Preference number: 3 (lower is better)
Translates to: SFRSPLTGTYQS*PRLRCWRFAFS
Trigger: TGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCAGTGAGGGGAGAACGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 72 bp GCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTaGACCTACAGGGTCAATCGAGCTGGGGTCATAGGG +
Preference number: 3 (lower is better)
Translates to: AHILVRCHLETF*TYRVNRAGVIG
Trigger: CCCTATGACCCCAGCTCGATTGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 72 bp CTGAGGCCCACCTACTCTGCTACAAGCAGTGAACAATaGTTAGGAGGATTCCAGAAATGCTGCCCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: LRPTYSATSSEQ*LGGFQKCCPQL
Trigger: GAGCTGGGGGCAGCATTTCTGGAATCCTCCTAACCATTGTTCACTGCTTGTAGCAGAGTAGGTGGGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 72 bp CCTTCCACAGCCTCTGTGTGGGAGTTGCCTCTGGTTTaGTATAAGTCAGAGGAATCTTGGTCCCCGTACCAC +
Preference number: 3 (lower is better)
Translates to: PSTASVWELPLV*YKSEESWSPYH
Trigger: GTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAACCAGAGGCAACTCCCACACAGAGGCTGTGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAAGGGCAGGAAAGGACTaGTCACTAACCCTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKRAGKD*SLTLRP
Trigger: GGGCCTCAGGGTTAGTGACAAGTCCTTTCCTGCCCT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACCAGGCACAAGTCTGTaGTGCGTGGCAGTGATGAAG +
Preference number: 3 (lower is better)
Translates to: FDISQRNLGPRTTALSGEPGTSL*CVAVMK
Trigger: CTTCATCACTGCCACGCACAACAGACTTGTGCCTGG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 72 bp CTTACCCTTCCACAGCCTCTGTGTGGGAGTTGCCTCTaGTTTGATATAAGTCAGAGGAATCTTGGTCCCCGT +
Preference number: 3 (lower is better)
Translates to: LTLPQPLCGSCL*FDISQRNLGPR
Trigger: ACGGGGACCAAGATTCCTCTGACTTATATCAAACCAGAGGCAACTCCCACACAGAGGCTGTGGAAGGGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAGACAACTTGGCCTCTTaGCTGCTCTTGGTCTTGTAT +
Preference number: 3 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSDNLAS*LLLVLY
Trigger: ATACAAGACCAAGAGCAGCAAAGAGGCCAAGTTGTC...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCATTTGCTTGTGACAACTaGGCCTCTTTGCTGCTCTTG +
Preference number: 3 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSFACDN*ASLLLL
Trigger: CAAGAGCAGCAAAGAGGCCAAGTTGTCACAAGCAAA...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 72 bp TGTTTCCAGAGATCTTGGTTCACGGTGGTTCTGAATTaGATACTTCCCTCCCCCACGTCACCACCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: CFQRSWFTVVLN*ILPSPTSPPWK
Trigger: TTTCCAGGGTGGTGACGTGGGGGAGGGAAGTATTCAATTCAGAACCACCGTGAACCAAGATCTCTGGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 72 bp GAGTTTGTTTCCAGAGATCTTGGTTCACGGTGGTTCTaGATTGAATACTTCCCTCCCCCACGTCACCACCCT +
Preference number: 3 (lower is better)
Translates to: EFVSRDLGSRWF*IEYFPPPRHHP
Trigger: AGGGTGGTGACGTGGGGGAGGGAAGTATTCAATTCAGAACCACCGTGAACCAAGATCTCTGGAAACAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 72 bp TTCAGGATCATTGGGATCCAGGTAGAGACAGATGGCTaGACACAGAAACAGCTAGGGGTAAGCAGAGAGGTA +
Preference number: 3 (lower is better)
Translates to: FRIIGIQVETDG*TQKQLGVSREV
Trigger: TACCTCTCTGCTTACCCCTAGCTGTTTCTGTGTCCAGCCATCTGTCTCTACCTGGATCCCAATGATCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCATCAGGTGTTGGCGATTaGCCTTTTCAAGATTCCAGT +
Preference number: 3 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSSGVGD*PFQDSS
Trigger: ACTGGAATCTTGAAAAGGCAAATCGCCAACACCTGA...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATCTTCACTCCTTTGCTaGCACAGAGGTGATGAGGCT +
Preference number: 3 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKSSLLC*HRGDEA
Trigger: AGCCTCATCACCTCTGTGCAAGCAAAGGAGTGAAGA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGAGGGCAGGAAAGGACTaGTCACTAACCCTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLRAGKD*SLTLRP
Trigger: GGGCCTCAGGGTTAGTGACAAGTCCTTTCCTGCCCT...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACCCAGGCACAAGTCTGTaGTGCGTGGCAGTGATGAAG +
Preference number: 3 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHPGTSL*CVAVMK
Trigger: CTTCATCACTGCCACGCACAACAGACTTGTGCCTGG...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 72 bp TTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTaGGTGGCAGTGATGAAGAAGGCTTTACTGATGTGT +
Preference number: 3 (lower is better)
Translates to: FTQIELPGTSLL*VAVMKKALLMC
Trigger: ACACATCAGTAAAGCCTTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 72 bp GGATGGTCTAATGGTCTTTTAGGAAGTGGCATGACGTaGGCTCTGAACGTGAAGTGGAAGGAACACAAAACA +
Preference number: 3 (lower is better)
Translates to: GWSNGLLGSGMT*ALNVKWKEHKT
Trigger: TGTTTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAGACCATTAGACCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGTATTTTCTTCCTGTTTaGCTTGTGACAACTTGGCCT +
Preference number: 3 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVYFLPV*LVTTWP
Trigger: AGGCCAAGTTGTCACAAGCAAAACAGGAAGAAAATA...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGACAAAATGCATTGTTTaGGTTCAAAGGTGTTGGGTC +
Preference number: 3 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVTKCIV*VQRCWV
Trigger: GACCCAACACCTTTGAACCAAAACAATGCATTTTGT...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATTTGCCGTGTGGTCACTaGGCAGCTCTGCACAGGTCA +
Preference number: 3 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNLPCGH*AALHRS
Trigger: TGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAA...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 72 bp AAACTCTCCCAATTTTTGCTTCACTCTTTCCTCCTCTaGAGTTGCATTCACACAGATAGAACTCCCAGGCAC +
Preference number: 3 (lower is better)
Translates to: KLSQFLLHSFLL*SCIHTDRTPRH
Trigger: GTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAGGAAAGAGTGAAGCAAAAATTGGGAGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR GCA 72 bp ATCACTGCTCTCAGAGGCAGTGGGTGTGGTAGAAAATaGATTAGACTAATAGCCAAAAGACTCGTGTTCTGG +
Preference number: 3 (lower is better)
Translates to: ITALRGSGCGRK*IRLIAKRLVFW
Trigger: CCAGAACACGAGTCTTTTGGCTATTAGTCTAATGCATTTTCTACCACACCCACTGCCTCTGAGAGCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGGACAACTTGGCCTCTTaGCTGCTCTTGGTCTTGTAT +
Preference number: 3 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLDNLAS*LLLVLY
Trigger: ATACAAGACCAAGAGCAGCAAAGAGGCCAAGTTGTC...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCATATTTTCTTCCTGTTTaGCTTGTGACAACTTGGCCT +
Preference number: 3 (lower is better)
Translates to: IPELTASQVLAICLFKIPYFLPV*LVTTWP
Trigger: AGGCCAAGTTGTCACAAGCAAAACAGGAAGAAAATA...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAACAAAATGCATTGTTTaGGTTCAAAGGTGTTGGGTC +
Preference number: 3 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKTKCIV*VQRCWV
Trigger: GACCCAACACCTTTGAACCAAAACAATGCATTTTGT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR-3UTR CAA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACCCTCACAAAATGCATaGTTTTGGTTCAAAGGTGTT +
Preference number: 3 (lower is better)
Translates to: FDISQRNLGPRTTALSGEPSQNA*FWFKGV
Trigger: AACACCTTTGAACCAAAACAATGCATTTTGTGAGGG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 72 bp ATGCTCTTCATGGTGCTGTTTGGGCTCCGAGGGTCATaGGTCATAACAATGTTTTTCCTTCATCTAGTCATT +
Preference number: 3 (lower is better)
Translates to: MLFMVLFGLRGS*VITMFFLHLVI
Trigger: AATGACTAGATGAAGGAAAAACATTGTTATGACCCATGACCCTCGGAGCCCAAACAGCACCATGAAGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 72 bp ATGTTCCCTTGGTGCCCTATCAAACAGATCCTTTGTTaGATCTGTCACTATTCTAACCCTGTAATGATCTGT +
Preference number: 3 (lower is better)
Translates to: MFPWCPIKQILC*ICHYSNPVMIC
Trigger: ACAGATCATTACAGGGTTAGAATAGTGACAGATTCAACAAAGGATCTGTTTGATAGGGCACCAAGGGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CCA 72 bp TGGAGGAAAAATCCTAGGACAAGATGTCTTAAGTCCTaGATTGCAATAATGGTTCTGCCACTAACTTGTCAT +
Preference number: 3 (lower is better)
Translates to: WRKNPRTRCLKS*IAIMVLPLTCH
Trigger: ATGACAAGTTAGTGGCAGAACCATTATTGCAATCCAGGACTTAAGACATCTTGTCCTAGGATTTTTCCTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 72 bp TATAAGACTATGTCTCCAATTACAGTATGGATTCTTTaGTGGATCTTCTCCAAAGCATCACTGCTCTCAGAG +
Preference number: 3 (lower is better)
Translates to: YKTMSPITVWIL*WIFSKASLLSE
Trigger: CTCTGAGAGCAGTGATGCTTTGGAGAAGATCCATCAAAGAATCCATACTGTAATTGGAGACATAGTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR TCA 72 bp AAAAATTCTTTTCTAGTCCTTTGCCCGCCCTCTAAGTaGAGTTTAGCTTGGTCTTCTAATGAGATGTGTATA +
Preference number: 3 (lower is better)
Translates to: KNSFLVLCPPSK*SLAWSSNEMCI
Trigger: TATACACATCTCATTAGAAGACCAAGCTAAACTTCACTTAGAGGGCGGGCAAAGGACTAGAAAAGAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCCGGGGCCAGGGGCATaGGGCAGTTGGCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRPGPGA*GSWPPA
Trigger: TGCCGGTGGCCAACTGCCCCATGCCCCTGGCCCCGG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGGTGACTCCAGCTCTTaGGCCGGCAGCCGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRGDSSS*AGSRAD
Trigger: GTCCGCGCGGCTGCCGGCCCAAGAGCTGGAGTCACC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCCTCCGGCCGCCATGGTaGCTCCAGCTCTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPLRPPW*LQLLGR
Trigger: CCGGCCCAAGAGCTGGAGTCACCATGGCGGCCGGAG...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTGCTGCCCGGGACCGTaGCGCACGGCACCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPCCPGP*RTAPSP
Trigger: TGGAGACGGTGCCGTGCGGCACGGTCCCGGGCAGCA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCACGGCAGCTCCTTGCTaGCCGGGACCGTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPTAAPC*PGPCRT
Trigger: CGTGCGGCACGGTCCCGGGCAGCAAGGAGCTGCCGT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGCCCGCCACATGGTCTaGCGGAAGCTGAGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRARHMV*RKLSEG
Trigger: GCCCTCGCTCAGCTTCCGCCAGACCATGTGGCGGGC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCGCTCCAGCGCCTCGTTaGGGAGCCCGTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPAPAPR*GARCAC
Trigger: GCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGC...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCGCACGGCAGCTCCTTaGTGCCCGGGACCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFRTAAP*CPGPCR
Trigger: GCGGCACGGTCCCGGGCAGCAAGGAGCTGCCGTGCG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCCGGGGCCAGGGGCATaGGGCAGTTGGCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFPGPGA*GSWPPA
Trigger: TGCCGGTGGCCAACTGCCCCATGCCCCTGGCCCCGG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGTTCGTGTTGGGGCCTaGGCTGGCAGGGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLVRVGA*AGRGWP
Trigger: CGGCCACCCCCTGCCAGCCCAGGCCCCAACACGAAC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGTTCGTGTTGGGGCCTaGGCTGGCAGGGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAVRVGA*AGRGWP
Trigger: CGGCCACCCCCTGCCAGCCCAGGCCCCAACACGAAC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTCGGGCAGGACCAGATaGACTGGCCCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRSGRTR*TGPQPL
Trigger: CAGAGGCTGGGGGCCAGTCCATCTGGTCCTGCCCGA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR TCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCTCCGGCCGCCATGGTaGCTCCAGCTCTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFLRPPW*LQLLGR
Trigger: CCGGCCCAAGAGCTGGAGTCACCATGGCGGCCGGAG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCAGCAGCAGTCCCCGATaGTCTCCGGGAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRSSSPR*SPGGCR
Trigger: ACGGCATCCTCCCGGAGATCATCGGGGACTGCTGCT...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGGAAGACCCGGAGCGTaGCGAAGGCGCCGGACACGT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLGRPGA*RRRRTR
Trigger: ACGTGTCCGGCGCCTTCGTCACGCTCCGGGTCTTCC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTGGAGCGACTGGTTGTaGGGGAGGGCTGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRWSDWL*GRAAHC
Trigger: GCAGTGAGCAGCCCTCCCTCACAACCAGTCGCTCCA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGCCCTAATGACCGGCTaGGGCTGCGAGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAALMTG*GCEPWV
Trigger: GACCCAGGGCTCGCAGCCTCAGCCGGTCATTAGGGC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTACGGCAGCTCCTTGCTaGCCGGGACCGTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFTAAPC*PGPCRT
Trigger: CGTGCGGCACGGTCCCGGGCAGCAAGGAGCTGCCGT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGGGGCATGGGGCAGTTaGCCACCGGCATCCACCCGA +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAGAWGS*PPASTR
Trigger: TCGGGTGGATGCCGGTGGCCAACTGCCCCATGCCCC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGGTAGCGCTCCAGCGTaGTCCTCCAGGTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRGSAPA*SSRSGT
Trigger: GGTTCCAGACCTGGAGGACCACGCTGGAGCGCTACC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTGTTGGGGCCTGGGCTaGCAGGGGGTGGCCGACTTT +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPCWGLG*QGVADF
Trigger: AAAGTCGGCCACCCCCTGCCAGCCCAGGCCCCAACA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCGCCGGCTCGCCGAGCTaGAGAACTTTGCGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPAGSPS*RTLRSA
Trigger: GGCGCTTCGCAAAGTTCTCCAGCTCGGCGAGCCGGC...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACCAGAGCTCGCGGGGTaGAAGTGGCGTCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLPELAG*KWRRAG
Trigger: TCCTGCCCGACGCCACTTCCACCCCGCGAGCTCTGG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCAGCAGCAGTCCCCGATaGTCTCCGGGAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPSSSPR*SPGGCR
Trigger: ACGGCATCCTCCCGGAGATCATCGGGGACTGCTGCT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTGGTCTGGCGGAAGCTaGGCGAGGGCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPWSGGS*ARAWTP
Trigger: AGGAGTCCATGCCCTCGCTCAGCTTCCGCCAGACCA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGCTCCAGCGCCTCGTTaGGGAGCCCGTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFAPAPR*GARCAC
Trigger: GCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTCCACGCTAGCAGCGTaGACCTCAGGTGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRSTLAA*TSGAPL
Trigger: CAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGTGGTCTTGCCCATGTaGTCCTCTTCTGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRVVLPM*SSSGVP
Trigger: GGGCACCCCAGAAGAGGAGCACATGGGCAAGACCAC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCCGGGGCCAGGGGCATaGGGCAGTTGGCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKPGPGA*GSWPPA
Trigger: TGCCGGTGGCCAACTGCCCCATGCCCCTGGCCCCGG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGCCCGCCACATGGTCTaGCGGAAGCTGAGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFARHMV*RKLSEG
Trigger: GCCCTCGCTCAGCTTCCGCCAGACCATGTGGCGGGC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGGCTGCTCACTGCCCTaGATGTGGATCGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRGCSLP*MWIVLS
Trigger: GCTCAGCACGATCCACATCCAGGGCAGTGAGCAGCC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTGGGCTGGCAGGGGGTaGCCGACTTTCCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFWAGRG*PTFPLW
Trigger: CCAGAGGGGGAAAGTCGGCCACCCCCTGCCAGCCCA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCAAGGAATGTTCGTGTTaGGGCCTGGGCTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRKECSC*GLGWQG
Trigger: CCCCTGCCAGCCCAGGCCCCAACACGAACATTCCTT...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACTCGCGGGGTGGAAGTaGCGTCGGGCAGGACCAGAT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLLAGWK*RRAGPD
Trigger: ATCTGGTCCTGCCCGACGCCACTTCCACCCCGCGAG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR CCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCGGCCGCGACGGCCCTTaGCGTCACGTAGAGACCTTT +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPGRDGP*RHVETF
Trigger: AAAGGTCTCTACGTGACGCCAAGGGCCGTCGCGGCC...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR TCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTAGTCGTTGTCGTCCATaGGCCGCTCGGCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFASRCRP*AARRSP
Trigger: GGGAGAACGCCGAGCGGCTCATGGACGACAACGACT...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTATGGTCTGGCGGAAGCTaGGCGAGGGCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLWSGGS*ARAWTP
Trigger: AGGAGTCCATGCCCTCGCTCAGCTTCCGCCAGACCA...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCTGGCTCTCGATGAGTaGGGTGGTCTTGCCCATGTG +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRLALDE*GGLAHV
Trigger: CACATGGGCAAGACCACCTCACTCATCGAGAGCCAG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTCCACGCTAGCAGCGTaGACCTCAGGTGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPSTLAA*TSGAPL
Trigger: CAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTTCCTCTGGCCCCAGTaGGATGCAGTATCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRFLWPQ*DAVSQG
Trigger: GCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATGCTGCCCGGGACCGTaGCGCACGGCACCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKCCPGP*RTAPSP
Trigger: TGGAGACGGTGCCGTGCGGCACGGTCCCGGGCAGCA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAACGCACGGCAGCTCCTTaGTGCCCGGGACCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEERTAAP*CPGPCR
Trigger: GCGGCACGGTCCCGGGCAGCAAGGAGCTGCCGTGCG...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGGGAGGGCTGCTCACTaGCCTGGATGTGGATCGTGC +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLGRAAH*PGCGSC
Trigger: GCACGATCCACATCCAGGGCAGTGAGCAGCCCTCCC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGGGAGGGCTGCTCACTaGCCTGGATGTGGATCGTGC +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAGRAAH*PGCGSC
Trigger: GCACGATCCACATCCAGGGCAGTGAGCAGCCCTCCC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCGAGCTGGAGAACTTTaGGAAGCGCCCCAAACCGCT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRRAGEL*EAPQTA
Trigger: AGCGGTTTGGGGCGCTTCGCAAAGTTCTCCAGCTCG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR CCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAGGTGACTCCAGCTCTTaGGCCGGCAGCCGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSGDSSS*AGSRAD
Trigger: GTCCGCGCGGCTGCCGGCCCAAGAGCTGGAGTCACC...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCCATGTGCTCCTCTTCTaGGGTGCCCGTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPHVLLF*GARQLQ
Trigger: CTGGAGCTGACGGGCACCCCAGAAGAGGAGCACATG...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTGTTGGGGCCTGGGCTaGCAGGGGGTGGCCGACTTT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFCWGLG*QGVADF
Trigger: AAAGTCGGCCACCCCCTGCCAGCCCAGGCCCCAACA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACGTTCGTGTTGGGGCCTaGGCTGGCAGGGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDVRVGA*AGRGWP
Trigger: CGGCCACCCCCTGCCAGCCCAGGCCCCAACACGAAC...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCCAGGACCAGATGGACTaGCCCCCAGCCTCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPQDQMD*PPASGR
Trigger: TCTACCAGAGGCTGGGGGCCAGTCCATCTGGTCCTG...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR TCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCCGTGCGGTAGAAGTTaGGCACGCAGCGGAACACCT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAPCGRS*ARSGTP
Trigger: AGGTGTTCCGCTGCGTGCTCAACTTCTACCGCACGG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTGGTCTGGCGGAAGCTaGGCGAGGGCATGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFWSGGS*ARAWTP
Trigger: AGGAGTCCATGCCCTCGCTCAGCTTCCGCCAGACCA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGGCTCCAGCGCCTCGTTaGGGAGCCCGTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKAPAPR*GARCAC
Trigger: GCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGC...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCGATGCTGGCTCTCGATaGGTGAGGTGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPDAGSR*VRWSCP
Trigger: TGGGCAAGACCACCTCACTCATCGAGAGCCAGCATC...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTGGAGCGACTGGTTGTaGGGGAGGGCTGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFWSDWL*GRAAHC
Trigger: GCAGTGAGCAGCCCTCCCTCACAACCAGTCGCTCCA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCAGGGAGTGGTCTCAGTaGCCACCCACCAACATGCCA +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPREWSQ*PPTNMP
Trigger: TGGCATGTTGGTGGGTGGTCACTGAGACCACTCCCT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCGGCACATACCAGAGTTaGCCGCGTCTCAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPGTYQS*PRLRCW
Trigger: CCAACACCTGAGACGCGGTCAACTCTGGTATGTGCC...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAACCTCAGCCTGTTGCTaGCATATCAGGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLTSACC*HIRAAR
Trigger: CCGGGCAGCCCTGATATGTCAGCAACAGGCTGAGGT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR GCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTACTCCTTCTCCGTGCTaGCCAGCAGGGTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFTPSPC*PAGCPG
Trigger: ACCCGGACACCCTGCTGGGCAGCACGGAGAAGGAGT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAAGAACTCCTTCTCCGTaGTGCCCAGCAGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLRTPSP*CPAGCP
Trigger: CGGACACCCTGCTGGGCAGCACGGAGAAGGAGTTCT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCCGTCGTAGGCAGAGATaGACTCGTAGCGCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPRRRQR*TRSAGS
Trigger: ACTACCCGCGCTACGAGTGCATCTCTGCCTACGACG...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACGCACGGCAGCTCCTTaGTGCCCGGGACCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGERTAAP*CPGPCR
Trigger: GCGGCACGGTCCCGGGCAGCAAGGAGCTGCCGTGCG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGTGGTCTTGCCCATGTaGTCCTCTTCTGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLVVLPM*SSSGVP
Trigger: GGGCACCCCAGAAGAGGAGCACATGGGCAAGACCAC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTCACTGCCCTGGATGTaGATCGTGCTGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRSLPWM*IVLSSC
Trigger: GCAAGAGCTCAGCACGATCCACATCCAGGGCAGTGA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTAAGGAATGTTCGTGTTaGGGCCTGGGCTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAKECSC*GLGWQG
Trigger: CCCCTGCCAGCCCAGGCCCCAACACGAACATTCCTT...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCTTCATGGTGCTGTTTaGGCTCCGAGGGTCATGGGT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRLHGAV*APRVMG
Trigger: ACCCATGACCCTCGGAGCCCAAACAGCACCATGAAG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACTCCGGCCGCCATGGTaGCTCCAGCTCTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGELRPPW*LQLLGR
Trigger: CCGGCCCAAGAGCTGGAGTCACCATGGCGGCCGGAG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTATTCCTCTGGCCCCAGTaGGATGCAGTATCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLFLWPQ*DAVSQG
Trigger: GCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAA...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGCCCTAATGACCGGCTaGGGCTGCGAGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVALMTG*GCEPWV
Trigger: GACCCAGGGCTCGCAGCCTCAGCCGGTCATTAGGGC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCAAACACCTCGCAGAGTaGGTCTTTCGATCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRKHLAE*VFRSLS
Trigger: GGAGAGGGATCGAAAGACTCACTCTGCGAGGTGTTT...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACGTCGTAGGCAGAGATaGACTCGTAGCGCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLRRRQR*TRSAGS
Trigger: ACTACCCGCGCTACGAGTGCATCTCTGCCTACGACG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCATGCTGCCCGGGACCGTaGCGCACGGCACCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPCCPGP*RTAPSP
Trigger: TGGAGACGGTGCCGTGCGGCACGGTCCCGGGCAGCA...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAACGGCAGCTCCTTGCTaGCCGGGACCGTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPTAAPC*PGPCRT
Trigger: CGTGCGGCACGGTCCCGGGCAGCAAGGAGCTGCCGT...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGGAGCCCGTTGCGCTTaGTGTGCAGGTATGCATTCG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLGARCA*CAGMHS
Trigger: CGAATGCATACCTGCACAGCAAGCGCAACGGGCTCC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCATCGTGCTGAGCTCTTaGATGCTGCGCAGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPIVLSS*MLRRRV
Trigger: TACTCGCCTGCGCAGCATGCAAGAGCTCAGCACGAT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGTCACTTGGCAGCTCTaGACAGGTCAGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLVTWQL*TGQLGS
Trigger: ACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGAC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGGGTCCATAGCAAGGTaGCCTAATGACCGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAGSIAR*PNDRLR
Trigger: CCTCAGCCGGTCATTAGGGCACCTTGCTATGGACCC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGGTGACTCCAGCTCTTaGGCCGGCAGCCGCGCGGAC +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEGDSSS*AGSRAD
Trigger: GTCCGCGCGGCTGCCGGCCCAAGAGCTGGAGTCACC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCGAGGGCATGGACTCCTaGTTGTTCTCCGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPEGMDS*LFSESL
Trigger: CAACGACTCGGAGAACAACCAGGAGTCCATGCCCTC...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTATGGCCACACGGATCCTaGCAAGGCGGGCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLWPHGS*QGGPSF
Trigger: AAAAGAAGGCCCGCCTTGCCAGGATCCGTGTGGCCA...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTTGGCCACACGGATCCTaGCAAGGCGGGCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAWPHGS*QGGPSF
Trigger: AAAAGAAGGCCCGCCTTGCCAGGATCCGTGTGGCCA...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCATGTGCTCCTCTTCTaGGGTGCCCGTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFHVLLF*GARQLQ
Trigger: CTGGAGCTGACGGGCACCCCAGAAGAGGAGCACATG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGTAGTGAGGCCTGGGTaGCTGGACAGTGAGGGACTT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAVVRPG*LDSEGL
Trigger: AAGTCCCTCACTGTCCAGCCACCCAGGCCTCACTAC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGCGCAGGCGAGTAGCTaGCAGGTTAGAATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLAQASS*QVRIGQ
Trigger: CTGCCCAATTCTAACCTGCCAGCTACTCGCCTGCGC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATGGGCTGGCAGGGGGTaGCCGACTTTCCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEWAGRG*PTFPLW
Trigger: CCAGAGGGGGAAAGTCGGCCACCCCCTGCCAGCCCA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCCCCACTACCCACTCTaGCCCTCTGTCCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAPHYPL*PSVQWF
Trigger: AAACCACTGGACAGAGGGCCAGAGTGGGTAGTGGGG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCAAGTCAGAGGAATCTTaGTCCCCGTACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRKSEES*SPYHCP
Trigger: AGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTT...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTATCCGCCCACTCACGTTaGGGACAATCAGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLSAHSR*GQSAHP
Trigger: AGGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGA...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAAGTCGTTGTCGTCCATaGGCCGCTCGGCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSSRCRP*AARRSP
Trigger: GGGAGAACGCCGAGCGGCTCATGGACGACAACGACT...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGGATGTGGATCGTGCTaGGCTCTTGCATGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFGCGSC*ALACCA
Trigger: TGCGCAGCATGCAAGAGCTCAGCACGATCCACATCC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCACAAGGCGGAGACCTTaGCAACATTGCTGGCTATGG +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPTRRRP*QHCWLW
Trigger: CCATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGGTTCACGGTGGTTCTaGATTGAATACTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRGSRWF*IEYFPP
Trigger: GGGAGGGAAGTATTCAATTCAGAACCACCGTGAACC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCACAATCAGCTCATCCTaGCGCTTGTTCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPTISSS*RLFLSA
Trigger: GGCCGACAAGAACAAGCGGCAGGATGAGCTGATTGT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGGTATGCATTCGAACTaGCTGTTTTGGCCACACGGA +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRGMHSN*LFWPHG
Trigger: TCCGTGTGGCCAAAACAGGCAGTTCGAATGCATACC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAATCGTGCTGAGCTCTTaGATGCTGCGCAGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLIVLSS*MLRRRV
Trigger: TACTCGCCTGCGCAGCATGCAAGAGCTCAGCACGAT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGGGAGGGCTGCTCACTaGCCTGGATGTGGATCGTGC +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKGRAAH*PGCGSC
Trigger: GCACGATCCACATCCAGGGCAGTGAGCAGCCCTCCC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGAGACGGAGTCTTaGTGTGTCACCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPFETES*CVTWAG
Trigger: TCCAGCCCAGGTGACACAGCAAGACTCCGTCTCAAA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACGGTAGCGCTCCAGCGTaGTCCTCCAGGTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDGSAPA*SSRSGT
Trigger: GGTTCCAGACCTGGAGGACCACGCTGGAGCGCTACC...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGCGCAGGCGAGTAGCTaGCAGGTTAGAATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFAQASS*QVRIGQ
Trigger: CTGCCCAATTCTAACCTGCCAGCTACTCGCCTGCGC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGTGTTGGGGCCTGGGCTaGCAGGGGGTGGCCGACTTT +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVCWGLG*QGVADF
Trigger: AAAGTCGGCCACCCCCTGCCAGCCCAGGCCCCAACA...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCCCCACTACCCACTCTaGCCCTCTGTCCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFPHYPL*PSVQWF
Trigger: AAACCACTGGACAGAGGGCCAGAGTGGGTAGTGGGG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAATCCAGGCCCTGTCCTaGCACATAGCCTATATCCCC +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLIQALS*HIAYIP
Trigger: GGGGATATAGGCTATGTGCCAGGACAGGGCCTGGAT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCAAGTCAGAGGAATCTTaGTCCCCGTACCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPKSEES*SPYHCP
Trigger: AGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGGAAGTGGCATGACGTaGGCTCTGAACGTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAGSGMT*ALNVKW
Trigger: CCACTTCACGTTCAGAGCCCACGTCATGCCACTTCC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACCTTGGTGTCCTCGTTaGAGAAGAACTCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLPWCPR*RRTPSP
Trigger: CGGAGAAGGAGTTCTTCTTCAACGAGGACACCAAGG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACCGTGCGGTAGAAGTTaGGCACGCAGCGGAACACCT +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSPCGRS*ARSGTP
Trigger: AGGTGTTCCGCTGCGTGCTCAACTTCTACCGCACGG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCCTCGTTGTTGGTCATaGCCAGACCGATGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAPRCWS*PDRCSR
Trigger: CCTACTACATCGGTCTGGTCATGACCAACAACGAGG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAACAAGGCGGAGACCTTaGCAACATTGCTGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLTRRRP*QHCWLW
Trigger: CCATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCAGTACCTCTGTTCTGTaGGGTAGACTTCCCTTACCC +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPSTSVL*GRLPLP
Trigger: GGGTAAGGGAAGTCTACCTCACAGAACAGAGGTACT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGTGGTTCATGAACTATaGAAGCTCAAGGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRVVHEL*KLKGHG
Trigger: GCCATGACCCTTGAGCTTTCATAGTTCATGAACCAC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAACGGTGGTTCTGAATTaGATACTTCCCTCCCCCACG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLTVVLN*ILPSPT
Trigger: CGTGGGGGAGGGAAGTATTCAATTCAGAACCACCGT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAACAATCAGCTCATCCTaGCGCTTGTTCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLTISSS*RLFLSA
Trigger: GGCCGACAAGAACAAGCGGCAGGATGAGCTGATTGT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGCGGGCCTTCTTTTGTaGCCTGCGTTTATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAAGLLL*PAFISS
Trigger: AGAGCTGATAAACGCAGGGCACAAAAGAAGGCCCGC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCGGTATGCATTCGAACTaGCTGTTTTGGCCACACGGA +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPGMHSN*LFWPHG
Trigger: TCCGTGTGGCCAAAACAGGCAGTTCGAATGCATACC...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCCGTTGCGCTTGCTGTaGAGGTATGCATTCGAACTG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAPLRLL*RYAFEL
Trigger: CAGTTCGAATGCATACCTGCACAGCAAGCGCAACGG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCAGCGTGAACCTCAGGTaGCCCTTTGCTACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPSVNLR*PFATSF
Trigger: AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACTGGCCCCAGTGAGATaGAGTATCACAGGGCTATGT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLLAPVR*SITGLC
Trigger: ACATAGCCCTGTGATACTGCATCTCACTGGGGCCAG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCTGGCCCCAGTGAGATaGAGTATCACAGGGCTATGT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFALAPVR*SITGLC
Trigger: ACATAGCCCTGTGATACTGCATCTCACTGGGGCCAG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCGGCACAAGTCTGTTGTaGGTGGCAGTGATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPGTSLL*VAVMKK
Trigger: CTTCTTCATCACTGCCACGCACAACAGACTTGTGCC...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTTCTCCAAAGCATCACTaGTCTCAGAGGCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFASPKHH*SQRQWV
Trigger: CACCCACTGCCTCTGAGAGCAGTGATGCTTTGGAGA...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCCCTTTTTCTTGCAGTaGGATTTCAGGTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRPFFLQ*DFRSGT
Trigger: GGTTCCAGACCTGAAATCGCACTGCAAGAAAAAGGG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR CCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGGTAGCGCTCCAGCGTaGTCCTCCAGGTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVGSAPA*SSRSGT
Trigger: GGTTCCAGACCTGGAGGACCACGCTGGAGCGCTACC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGAGGGCATGGACTCCTaGTTGTTCTCCGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFEGMDS*LFSESL
Trigger: CAACGACTCGGAGAACAACCAGGAGTCCATGCCCTC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCACTCAAGGAGCAGATaGAGCCGAAGATCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAHSRSR*SRRSSL
Trigger: CAGGGAAGATCTTCGGCTCCATCTGCTCCTTGAGTG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCATGTGCTCCTCTTCTaGGGTGCCCGTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKHVLLF*GARQLQ
Trigger: CTGGAGCTGACGGGCACCCCAGAAGAGGAGCACATG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGGCTGCTCACTGCCCTaGATGTGGATCGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKGCSLP*MWIVLS
Trigger: GCTCAGCACGATCCACATCCAGGGCAGTGAGCAGCC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGGACCAGAAGTGAGCTaGATCTTTTCTCTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRGPEVS*IFSLAK
Trigger: CTTAGCCAGAGAAAAGATCCAGCTCACTTCTGGTCC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCAAAGCTCAAGGGTCATaGCTATTGGCCCCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRKAQGS*LLAPRK
Trigger: TTTTCTGGGGGCCAATAGCCATGACCCTTGAGCTTT...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCATCAGGTACAGCAGTaGCACACGACTCAATACTGT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRHQVQQ*HTTQYC
Trigger: ACAGTATTGAGTCGTGTGCCACTGCTGTACCTGATG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 72 bp GTCCTTCCGTTCTCCCCTCACTGGCACATACCAGAGTaGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VLPFSPHWHIPE*TASQVLAICLF
Trigger: GAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCAGTGAGGGGAGAACGGAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAACCGTGCGGTAGAAGTTaGGCACGCAGCGGAACACCT +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEPCGRS*ARSGTP
Trigger: AGGTGTTCCGCTGCGTGCTCAACTTCTACCGCACGG...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAAGTCGTTGTCGTCCATaGGCCGCTCGGCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPSRCRP*AARRSP
Trigger: GGGAGAACGCCGAGCGGCTCATGGACGACAACGACT...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACTGGCTCTCGATGAGTaGGGTGGTCTTGCCCATGTG +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSLALDE*GGLAHV
Trigger: CACATGGGCAAGACCACCTCACTCATCGAGAGCCAG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCATGGAGCGACTGGTTGTaGGGGAGGGCTGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPWSDWL*GRAAHC
Trigger: GCAGTGAGCAGCCCTCCCTCACAACCAGTCGCTCCA...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCCACCTCGAAACCTTTTaGACCTACAGGGTCAATCGA +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPHLETF*TYRVNR
Trigger: TCGATTGACCCTGTAGGTTCAAAAGGTTTCGAGGTG...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTTGCCCGCCCTCTAAGTaGAGTTTAGCTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFACPPSK*SLAWSS
Trigger: AGAAGACCAAGCTAAACTTCACTTAGAGGGCGGGCA...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAACTCCTTCTCCGTGCTaGCCAGCAGGGTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKTPSPC*PAGCPG
Trigger: ACCCGGACACCCTGCTGGGCAGCACGGAGAAGGAGT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAAAGAACTCCTTCTCCGTaGTGCCCAGCAGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEERTPSP*CPAGCP
Trigger: CGGACACCCTGCTGGGCAGCACGGAGAAGGAGTTCT...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGGTATGCATTCGAACTaGCTGTTTTGGCCACACGGA +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAGMHSN*LFWPHG
Trigger: TCCGTGTGGCCAAAACAGGCAGTTCGAATGCATACC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCTTGCTGTGCAGGTATaGATTCGAACTGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRLAVQV*IRTACF
Trigger: AAAACAGGCAGTTCGAATGCATACCTGCACAGCAAG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGGGAGCCCGTTGCGCTTaGTGTGCAGGTATGCATTCG +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKGARCA*CAGMHS
Trigger: CGAATGCATACCTGCACAGCAAGCGCAACGGGCTCC...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTCTCAGTCCGTCGTCTaGTTTCAAATTAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRSQSVV*FQIKAG
Trigger: TCCAGCCTTAATTTGAAAGCAGACGACGGACTGAGA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACGTCACTTGGCAGCTCTaGACAGGTCAGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDVTWQL*TGQLGS
Trigger: ACTGCCCAGCTGACCTGTGCAGAGCTGCCAAGTGAC...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGGAGGATTCCAGAAATaGTGCCCCCAGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKGGFQK*CPQLHQ
Trigger: CTGGTGGAGCTGGGGGCAGCATTTCTGGAATCCTCC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCCAGGCTACAGAGACTaGAGCAAGGTGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKPGYRD*SKVAGC
Trigger: ACACCCAGCCACCTTGCTGCAGTCTCTGTAGCCTGG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCAAACCCCTTTTTCTTaGAGTGCGATTTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRQTPFS*SAISGL
Trigger: CAGACCTGAAATCGCACTGCAAGAAAAAGGGGTTTG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCACTCAAGGAGCAGATaGAGCCGAAGATCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFHSRSR*SRRSSL
Trigger: CAGGGAAGATCTTCGGCTCCATCTGCTCCTTGAGTG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATGGCCACACGGATCCTaGCAAGGCGGGCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKWPHGS*QGGPSF
Trigger: AAAAGAAGGCCCGCCTTGCCAGGATCCGTGTGGCCA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTCGAACTGCCTGTTTTaGCCACACGGATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFSNCLF*PHGSWQ
Trigger: TTGCCAGGATCCGTGTGGCCAAAACAGGCAGTTCGA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAGTAGTGAGGCCTGGGTaGCTGGACAGTGAGGGACTT +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSVVRPG*LDSEGL
Trigger: AAGTCCCTCACTGTCCAGCCACCCAGGCCTCACTAC...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGTAGTGAGGCCTGGGTaGCTGGACAGTGAGGGACTT +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKVVRPG*LDSEGL
Trigger: AAGTCCCTCACTGTCCAGCCACCCAGGCCTCACTAC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGGATGTTTTGCAGTTTaGTCTCAGTCCGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLGCFAV*SQSVVC
Trigger: GCAGACGACGGACTGAGACCAAACTGCAAAACATCC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCATGGCTGTGGTGATCTaGGATGTTTTGCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRMAVVI*DVLQFG
Trigger: ACCAAACTGCAAAACATCCCAGATCACCACAGCCAT...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCAACATTGCTGGCTATaGAAGGAATGTTCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRQHCWL*KECSCW
Trigger: CCAACACGAACATTCCTTCCATAGCCAGCAATGTTG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGAAACGACTGTTATTTaGTCTGAGTCTGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRETTVI*SESEAP
Trigger: AGGAGCCTCAGACTCAGACCAAATAACAGTCGTTTC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAACAGGGTCAATCGAGCTaGGGTCATAGGGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKQGQSS*GHREAH
Trigger: GTGGGCTTCCCTATGACCCCAGCTCGATTGACCCTG...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGCTGGATCTTTTCTCTaGCTAAGGCTACAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLAGSFL*LRLQWR
Trigger: CCTCCACTGTAGCCTTAGCCAGAGAAAAGATCCAGC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCCCCACGTCACCACCCTaGAAATCCAGGTATGAAAAA +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPPTSPP*KSRYEK
Trigger: TTTTTCATACCTGGATTTCCAGGGTGGTGACGTGGG...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGTGCGATTTCAGGTCTaGAACCTCAGCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFVRFQV*NLSLLL
Trigger: CAGCAACAGGCTGAGGTTCCAGACCTGAAATCGCAC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR TCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGGGAAGACCCGGAGCGTaGCGAAGGCGCCGGACACGT +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLGRPGA*RRRRTR
Trigger: ACGTGTCCGGCGCCTTCGTCACGCTCCGGGTCTTCC...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAAGATGCTGGCTCTCGATaGGTGAGGTGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEDAGSR*VRWSCP
Trigger: TGGGCAAGACCACCTCACTCATCGAGAGCCAGCATC...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTATGGGTAGTTCTGCATTaGACTCTCCATGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLWVVLH*TLHAVL
Trigger: CAGAACTGCATGGAGAGTTCAATGCAGAACTACCCA...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGGATGTGGATCGTGCTaGGCTCTTGCATGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVGCGSC*ALACCA
Trigger: TGCGCAGCATGCAAGAGCTCAGCACGATCCACATCC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGAGGGAGTGGTCTCAGTaGCCACCCACCAACATGCCA +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVREWSQ*PPTNMP
Trigger: TGGCATGTTGGTGGGTGGTCACTGAGACCACTCCCT...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTGTCAAAGTGGTTCATaGACTATGAAAGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRCQSGS*TMKAQG
Trigger: CCCTTGAGCTTTCATAGTTCATGAACCACTTTGACA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGCGCAGGAATTTAGTTaGGTCCAGGTAACTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFAQEFS*VQVTLP
Trigger: GGGCAAAGTTACCTGGACTCAACTAAATTCCTGCGC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR GCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGCCGAAGATCTTCCCTaGAATCGTCTTAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFAEDLP*NRLRHH
Trigger: ATGGTGCCTAAGACGATTGCAGGGAAGATCTTCGGC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAGTGGTCTTGCCCATGTaGTCCTCTTCTGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPVVLPM*SSSGVP
Trigger: GGGCACCCCAGAAGAGGAGCACATGGGCAAGACCAC...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGCATTGAACTCTCCATaGAGTTCTGCTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRALNSP*SSAQTS
Trigger: AGATGTTTGAGCAGAACTGCATGGAGAGTTCAATGC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGGCACAAGTCTGTTGTaGGTGGCAGTGATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFGTSLL*VAVMKK
Trigger: CTTCTTCATCACTGCCACGCACAACAGACTTGTGCC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCTTCACTCCTTTGCTTaGACAGAGGTGATGAGGCTT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFALHSFA*TEVMRL
Trigger: AAGCCTCATCACCTCTGTGCAAGCAAAGGAGTGAAG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAAGGAGGATTCCAGAAATaGTGCCCCCAGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEGGFQK*CPQLHQ
Trigger: CTGGTGGAGCTGGGGGCAGCATTTCTGGAATCCTCC...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGTGAGGGACTTCTTGTaGATGGGTAGTTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAVRDFL*MGSSAL
Trigger: CAATGCAGAACTACCCATCCACAAGAAGTCCCTCAC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTAATTGGGCAGGTGTGTaGTCTTCTTACTACGACGGG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFNWAGV*SSYYDG
Trigger: CCCGTCGTAGTAAGAAGACCACACACCTGCCCAATT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAACCCCACTACCCACTCTaGCCCTCTGTCCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEPHYPL*PSVQWF
Trigger: AAACCACTGGACAGAGGGCCAGAGTGGGTAGTGGGG...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTTTGCTTGTGACAACTTaGCCTCTTTGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFALLVTT*PLCCSW
Trigger: CCAAGAGCAGCAAAGAGGCCAAGTTGTCACAAGCAA...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTACCACTGCCCTCTCTaGAGAAAACTACTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDYHCPL*RKLLPG
Trigger: CCCCGGGAGTAGTTTTCTCCAGAGAGGGCAGTGGTA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACCCACGTCACCACCCTaGAAATCCAGGTATGAAAAA +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLPTSPP*KSRYEK
Trigger: TTTTTCATACCTGGATTTCCAGGGTGGTGACGTGGG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGGGCTCCGAGGGTCATaGGTCATAACAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLGLRGS*VITMFF
Trigger: GAAAAACATTGTTATGACCCATGACCCTCGGAGCCC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACCTTCATGGTGCTGTTTaGGCTCCGAGGGTCATGGGT +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDLHGAV*APRVMG
Trigger: ACCCATGACCCTCGGAGCCCAAACAGCACCATGAAG...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 72 bp TCTTGGAAGGGCTCTGGATGGGCTTTATGGTGGGTCTaGAAGGAAGGGTCCATAGCAAGGTGCCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: SWKGSGWALWWV*KEGSIARCPND
Trigger: GTCATTAGGGCACCTTGCTATGGACCCTTCCTTCAAGACCCACCATAAAGCCCATCCAGAGCCCTTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGTCCGCCCACTCACGTTaGGGACAATCAGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVSAHSR*GQSAHP
Trigger: AGGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGA...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACCTTGGTGTCCTCGTTaGAGAAGAACTCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSPWCPR*RRTPSP
Trigger: CGGAGAAGGAGTTCTTCTTCAACGAGGACACCAAGG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCCTTGGTGTCCTCGTTaGAGAAGAACTCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKPWCPR*RRTPSP
Trigger: CGGAGAAGGAGTTCTTCTTCAACGAGGACACCAAGG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACCCTCGTTGTTGGTCATaGCCAGACCGATGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDPRCWS*PDRCSR
Trigger: CCTACTACATCGGTCTGGTCATGACCAACAACGAGG...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGATGCTGGCTCTCGATaGGTGAGGTGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEDAGSR*VRWSCP
Trigger: TGGGCAAGACCACCTCACTCATCGAGAGCCAGCATC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAACAAGGCGGAGACCTTaGCAACATTGCTGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSTRRRP*QHCWLW
Trigger: CCATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGT...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAATTCCTCTGGCCCCAGTaGGATGCAGTATCACAGGGC +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEFLWPQ*DAVSQG
Trigger: GCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAA...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAACTCCTGACTTCAGGTaGTCTGTTCACCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKTPDFR*SVHLGF
Trigger: GAAGCCGAGGTGAACAGATCACCTGAAGTCAGGAGT...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGTGGTTCATGAACTATaGAAGCTCAAGGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFVVHEL*KLKGHG
Trigger: GCCATGACCCTTGAGCTTTCATAGTTCATGAACCAC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACACAATCAGCTCATCCTaGCGCTTGTTCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDTISSS*RLFLSA
Trigger: GGCCGACAAGAACAAGCGGCAGGATGAGCTGATTGT...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCCTTCTTTTGTGCCCTaGGTTTATCAGCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAPSFVP*VYQLSD
Trigger: ATCAGAGAGCTGATAAACGCAGGGCACAAAAGAAGG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACCGTTGCGCTTGCTGTaGAGGTATGCATTCGAACTG +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSPLRLL*RYAFEL
Trigger: CAGTTCGAATGCATACCTGCACAGCAAGCGCAACGG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGGAGCCCGTTGCGCTTaGTGTGCAGGTATGCATTCG +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEGARCA*CAGMHS
Trigger: CGAATGCATACCTGCACAGCAAGCGCAACGGGCTCC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACTCTCCATGCAGTTCTaGTCAAACATCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLLSMQF*SNICSS
Trigger: TGATGAGCAGATGTTTGAGCAGAACTGCATGGAGAG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCGCATTGAACTCTCCATaGAGTTCTGCTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPALNSP*SSAQTS
Trigger: AGATGTTTGAGCAGAACTGCATGGAGAGTTCAATGC...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTTCTCAGTCCGTCGTCTaGTTTCAAATTAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFASQSVV*FQIKAG
Trigger: TCCAGCCTTAATTTGAAAGCAGACGACGGACTGAGA...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGACCACCCACCAACATaGCAGTCCCCTTCATTCCCC +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKDHPPT*QSPSFP
Trigger: GGGGAATGAAGGGGACTGGCATGTTGGTGGGTGGTC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACCTGGCCCCAGTGAGATaGAGTATCACAGGGCTATGT +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDLAPVR*SITGLC
Trigger: ACATAGCCCTGTGATACTGCATCTCACTGGGGCCAG...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACAGGTGTTGGCGATTTaGCTTTTCAAGATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLQVLAI*LFKIPV
Trigger: CACTGGAATCTTGAAAAGGCAAATCGCCAACACCTG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGGGTCCATAGCAAGGTaGCCTAATGACCGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKGSIAR*PNDRLR
Trigger: CCTCAGCCGGTCATTAGGGCACCTTGCTATGGACCC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACCTCTGTGTGGGAGTTaGCTCTGGTTTGATATAAGT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLPLCGS*LWFDIS
Trigger: ACTTATATCAAACCAGAGGCAACTCCCACACAGAGG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAACCAGGCTACAGAGACTaGAGCAAGGTGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKPGYRD*SKVAGC
Trigger: ACACCCAGCCACCTTGCTGCAGTCTCTGTAGCCTGG...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAAGGGGTCCACCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLRGPPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGTGGACCCCT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGTTTGAGACGGAGTCTTaGTGTGTCACCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKFETES*CVTWAG
Trigger: TCCAGCCCAGGTGACACAGCAAGACTCCGTCTCAAA...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCAGGACTTGGGTCAGTaGCGTACACTGGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKQDLGQ*RTLVRV
Trigger: CACTCTAACCAGTGTACGGCACTGACCCAAGTCCTG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATCGAACTGCCTGTTTTaGCCACACGGATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKSNCLF*PHGSWQ
Trigger: TTGCCAGGATCCGTGTGGCCAAAACAGGCAGTTCGA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTCGAACTGCCTGTTTTaGCCACACGGATCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDSNCLF*PHGSWQ
Trigger: TTGCCAGGATCCGTGTGGCCAAAACAGGCAGTTCGA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATCACTGCCCTGGATGTaGATCGTGCTGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEESLPWM*IVLSSC
Trigger: GCAAGAGCTCAGCACGATCCACATCCAGGGCAGTGA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTATGGCTGTGGTGATCTaGGATGTTTTGCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAMAVVI*DVLQFG
Trigger: ACCAAACTGCAAAACATCCCAGATCACCACAGCCAT...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGGATGGGCTTTATGGTaGGTCTTGAAGGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKGWALW*VLKEGS
Trigger: GGACCCTTCCTTCAAGACCCACCATAAAGCCCATCC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACTCTTGGAAGGGCTCTaGATGGGCTTTATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSLLEGL*MGFMVG
Trigger: ACCCACCATAAAGCCCATCCAGAGCCCTTCCAAGAG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACAGGGTCAATCGAGCTaGGGTCATAGGGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEQGQSS*GHREAH
Trigger: GTGGGCTTCCCTATGACCCCAGCTCGATTGACCCTG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAAGTACCTCTGTTCTGTaGGGTAGACTTCCCTTACCC +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKSTSVL*GRLPLP
Trigger: GGGTAAGGGAAGTCTACCTCACAGAACAGAGGTACT...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTAGGGTGCAAGCTAGTTaGATAGATATGTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFRVQAS*IDMLSR
Trigger: CCTGGACAACATATCTATTCAACTAGCTTGCACCCT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCTCTGCTACAAGCAGTaGACAATGGTTAGGAGGATT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFLCYKQ*TMVRRI
Trigger: AATCCTCCTAACCATTGTTCACTGCTTGTAGCAGAG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTATCTATTGGTCTTTTaGAAGGGAGTCTATGCAGTT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRYLLVF*KGVYAV
Trigger: AACTGCATAGACTCCCTTTCAAAAGACCAATAGATA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGGCCGAAGATCTTCCCTaGAATCGTCTTAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKAEDLP*NRLRHH
Trigger: ATGGTGCCTAAGACGATTGCAGGGAAGATCTTCGGC...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGCCGAAGATCTTCCCTaGAATCGTCTTAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKAEDLP*NRLRHH
Trigger: ATGGTGCCTAAGACGATTGCAGGGAAGATCTTCGGC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGCGGGCCTTCTTTTGTaGCCTGCGTTTATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVAGLLL*PAFISS
Trigger: AGAGCTGATAAACGCAGGGCACAAAAGAAGGCCCGC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCCGTTGCGCTTGCTGTaGAGGTATGCATTCGAACTG +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVPLRLL*RYAFEL
Trigger: CAGTTCGAATGCATACCTGCACAGCAAGCGCAACGG...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCTCTCCATGCAGTTCTaGTCAAACATCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFLSMQF*SNICSS
Trigger: TGATGAGCAGATGTTTGAGCAGAACTGCATGGAGAG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAATCGTGCTGAGCTCTTaGATGCTGCGCAGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEIVLSS*MLRRRV
Trigger: TACTCGCCTGCGCAGCATGCAAGAGCTCAGCACGAT...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAGAGGGCATGGACTCCTaGTTGTTCTCCGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPEGMDS*LFSESL
Trigger: CAACGACTCGGAGAACAACCAGGAGTCCATGCCCTC...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACAATTGGGCAGGTGTGTaGTCTTCTTACTACGACGGG +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDNWAGV*SSYYDG
Trigger: CCCGTCGTAGTAAGAAGACCACACACCTGCCCAATT...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATCACTGCCCTGGATGTaGATCGTGCTGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKSLPWM*IVLSSC
Trigger: GCAAGAGCTCAGCACGATCCACATCCAGGGCAGTGA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAGGATGTTTTGCAGTTTaGTCTCAGTCCGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSGCFAV*SQSVVC
Trigger: GCAGACGACGGACTGAGACCAAACTGCAAAACATCC...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTATGGCTGTGGTGATCTaGGATGTTTTGCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFMAVVI*DVLQFG
Trigger: ACCAAACTGCAAAACATCCCAGATCACCACAGCCAT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCAACATTGCTGGCTATaGAAGGAATGTTCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFQHCWL*KECSCW
Trigger: CCAACACGAACATTCCTTCCATAGCCAGCAATGTTG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAATCCAGGCCCTGTCCTaGCACATAGCCTATATCCCC +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPIQALS*HIAYIP
Trigger: GGGGATATAGGCTATGTGCCAGGACAGGGCCTGGAT...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGAACTGCAAACACGAGTaGTTCCAACCCCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKNCKHE*FQPQGK
Trigger: CTTCCCTTGGGGTTGGAACCACTCGTGTTTGCAGTT...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGGATGGGCTTTATGGTaGGTCTTGAAGGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVGWALW*VLKEGS
Trigger: GGACCCTTCCTTCAAGACCCACCATAAAGCCCATCC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGTCTGGATGGGCTTTATaGTGGGTCTTGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKSGWAL*WVLKEG
Trigger: CCCTTCCTTCAAGACCCACCATAAAGCCCATCCAGA...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAACTCTTGGAAGGGCTCTaGATGGGCTTTATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEELLEGL*MGFMVG
Trigger: ACCCACCATAAAGCCCATCCAGAGCCCTTCCAAGAG...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAATACCACTGCCCTCTCTaGAGAAAACTACTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEYHCPL*RKLLPG
Trigger: CCCCGGGAGTAGTTTTCTCCAGAGAGGGCAGTGGTA...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACTTCTGCCCACATTCTaGTTAGGTGCCACCTCGAAA +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSLLPTF*LGATSK
Trigger: TTTCGAGGTGGCACCTAACCAGAATGTGGGCAGAAG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGGAAGTGGCATGACGTaGGCTCTGAACGTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEGSGMT*ALNVKW
Trigger: CCACTTCACGTTCAGAGCCCACGTCATGCCACTTCC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAAGGCTACAGTGGAGGATaGAGGAAAAGGGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEGYSGG*RKRGWS
Trigger: AGACCATCCCCTTTTCCTCCATCCTCCACTGTAGCC...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCTGAGTGGGACTGAATaGAATAGGTGGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFLSGTE*NRWFWE
Trigger: TTCCCAAAACCACCTATTCCATTCAGTCCCACTCAG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCAGTGCAATATAATGTaGAGGAAAAATCCTAGGACA +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRQCNIM*RKNPRT
Trigger: TGTCCTAGGATTTTTCCTCCACATTATATTGCACTG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTTGTTTAATCCAGATTaGATACATCAGGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRLFNPD*IHQVQQ
Trigger: CTGCTGTACCTGATGTATCCAATCTGGATTAAACAA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATGGGTAGTTCTGCATTaGACTCTCCATGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKWVVLH*TLHAVL
Trigger: CAGAACTGCATGGAGAGTTCAATGCAGAACTACCCA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTGGGTAGTTCTGCATTaGACTCTCCATGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDWVVLH*TLHAVL
Trigger: CAGAACTGCATGGAGAGTTCAATGCAGAACTACCCA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCACCTCGAAACCTTTTaGACCTACAGGGTCAATCGA +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKHLETF*TYRVNR
Trigger: TCGATTGACCCTGTAGGTTCAAAAGGTTTCGAGGTG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGCATTGAACTCTCCATaGAGTTCTGCTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFALNSP*SSAQTS
Trigger: AGATGTTTGAGCAGAACTGCATGGAGAGTTCAATGC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTACAACTTGGCCTCTTTaGTGCTCTTGGTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFTTWPL*CSWSCI
Trigger: AATACAAGACCAAGAGCAGCAAAGAGGCCAAGTTGT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACAGGACTTGGGTCAGTaGCGTACACTGGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEQDLGQ*RTLVRV
Trigger: CACTCTAACCAGTGTACGGCACTGACCCAAGTCCTG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGGGGCATGGGGCAGTTaGCCACCGGCATCCACCCGA +
Preference number: 4 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNGAWGS*PPASTR
Trigger: TCGGGTGGATGCCGGTGGCCAACTGCCCCATGCCCC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTATCATCAATAAACTCGTaGTTCTTGATGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLSSINS*FLMVEV
Trigger: AACCTCCACCATCAAGAACCACGAGTTTATTGATGA...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000315987.6
CDS-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATTGGGCTGGCAGGGGGTaGCCGACTTTCCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNWAGRG*PTFPLW
Trigger: CCAGAGGGGGAAAGTCGGCCACCCCCTGCCAGCCCA...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTTGCTTGTGACAACTTaGCCTCTTTGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDLLVTT*PLCCSW
Trigger: CCAAGAGCAGCAAAGAGGCCAAGTTGTCACAAGCAA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATCTGGATGGGCTTTATaGTGGGTCTTGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEESGWAL*WVLKEG
Trigger: CCCTTCCTTCAAGACCCACCATAAAGCCCATCCAGA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCATGGAAGGGCTCTGGATaGGCTTTATGGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPWKGSG*ALWWVL
Trigger: CAAGACCCACCATAAAGCCCATCCAGAGCCCTTCCA...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAATGGAAGGGCTCTGGATaGGCTTTATGGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEWKGSG*ALWWVL
Trigger: CAAGACCCACCATAAAGCCCATCCAGAGCCCTTCCA...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAACTTCTGCCCACATTCTaGTTAGGTGCCACCTCGAAA +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEELLPTF*LGATSK
Trigger: TTTCGAGGTGGCACCTAACCAGAATGTGGGCAGAAG...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCCATGTTGGCCAAGTTaGTCTTCAACTCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKPCWPS*SSTPDF
Trigger: GAAGTCAGGAGTTGAAGACCAACTTGGCCAACATGG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAACCATGTTGGCCAAGTTaGTCTTCAACTCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKPCWPS*SSTPDF
Trigger: GAAGTCAGGAGTTGAAGACCAACTTGGCCAACATGG...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACGGGGTTTCACCATGTTaGCCAAGTTGGTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDGVSPC*PSWSST
Trigger: AGTTGAAGACCAACTTGGCCAACATGGTGAAACCCC...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAAGCCTTCCAAGTAGCTaGGATTACAGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGESLPSS*DYRGPP
Trigger: TGGTGGACCCCTGTAATCCCAGCTACTTGGAAGGCT...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGGCTACAGTGGAGGATaGAGGAAAAGGGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEGYSGG*RKRGWS
Trigger: AGACCATCCCCTTTTCCTCCATCCTCCACTGTAGCC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAAAAATCCTGATATCCTaGTTTTTCAGTCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLKILIS*FFSHWP
Trigger: TGGCCAGTGACTGAAAAACCAGGATATCAGGATTTT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCAAGTATGGTTTGTATTaGTACAGTCAGGTGATTTCC +
Preference number: 4 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPKYGLY*YSQVIS
Trigger: GGAAATCACCTGACTGTACCAATACAAACCATACTT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCTACCCAGAGAATGGTaGTTTCCAAAGTATGGTTTG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFLPREW*FPKYGL
Trigger: CAAACCATACTTTGGAAACCACCATTCTCTGGGTAG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCACTGAGAATATCTATTaGTCTTTTGAAAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRTENIY*SFERES
Trigger: AGACTCCCTTTCAAAAGACCAATAGATATTCTCAGT...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 72 bp TTGTTTCCAGAGATCTTGGTTCACGGTGGTTCTGAATaGAATACTTCCCTCCCCCACGTCACCACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LFPEILVHGGSE*NTSLPHVTTLE
Trigger: TTCCAGGGTGGTGACGTGGGGGAGGGAAGTATTCAATTCAGAACCACCGTGAACCAAGATCTCTGGAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGTTCTTTCCCAGAAACTaGAACTGCAAACACGAGTGG +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKFFPRN*NCKHEW
Trigger: CCACTCGTGTTTGCAGTTTCAGTTTCTGGGAAAGAA...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTTACTTGCTTTTGCTTTaGAGCATTTTTCTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAYLLLL*SIFLEA
Trigger: TGCCTCAAGAAAAATGCTTCAAAGCAAAAGCAAGTA...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATGCCCGCCCTCTAAGTaGAGTTTAGCTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKCPPSK*SLAWSS
Trigger: AGAAGACCAAGCTAAACTTCACTTAGAGGGCGGGCA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACCCAGTCAGATCTTATaGAGCATAACTAAGATACTT +
Preference number: 4 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLPSQIL*SITKIL
Trigger: AAGTATCTTAGTTATGCTTCATAAGATCTGACTGGG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTTTTTGGACCAGAAGTaGGCTGGATCTTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDFLDQK*AGSFLW
Trigger: CCAGAGAAAAGATCCAGCTCACTTCTGGTCCAAAAA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAACCTTCTTTTGTGCCCTaGGTTTATCAGCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKPSFVP*VYQLSD
Trigger: ATCAGAGAGCTGATAAACGCAGGGCACAAAAGAAGG...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCTTGCTGTGCAGGTATaGATTCGAACTGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKLAVQV*IRTACF
Trigger: AAAACAGGCAGTTCGAATGCATACCTGCACAGCAAG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTTCTGCTCAAACATCTaGTCATCAATAAACTCGTGG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFFCSNI*SSINSW
Trigger: CCACGAGTTTATTGATGAGCAGATGTTTGAGCAGAA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAAGCGTGAACCTCAGGTaGCCCTTTGCTACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKSVNLR*PFATSF
Trigger: AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAACACTCTTTCCTCCTCTaGAGTTGCATTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKHSFLL*SCIHTD
Trigger: ATCTGTGTGAATGCAACTGCAGAGGAGGAAAGAGTG...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAAGGGGTCCACCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSRGPPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGTGGACCCCT...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGGGTGTGGTAGAAAATaGATTAGACTAATAGCCAAA +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAGCGRK*IRLIAK
Trigger: TTTGGCTATTAGTCTAATGCATTTTCTACCACACCC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACGGCTGCTCACTGCCCTaGATGTGGATCGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHGCSLP*MWIVLS
Trigger: GCTCAGCACGATCCACATCCAGGGCAGTGAGCAGCC...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAGGATGTTTTGCAGTTTaGTCTCAGTCCGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPGCFAV*SQSVVC
Trigger: GCAGACGACGGACTGAGACCAAACTGCAAAACATCC...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGGAAACGACTGTTATTTaGTCTGAGTCTGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKETTVI*SESEAP
Trigger: AGGAGCCTCAGACTCAGACCAAATAACAGTCGTTTC...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATTGTATTTTCCTCACTaGGGTCTCCAGAAACGACTG +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKLYFPH*GLQKRL
Trigger: CAGTCGTTTCTGGAGACCCCAGTGAGGAAAATACAA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTTGGTTCAAAGGTGTTaGGTCCATGGAGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFLVQRC*VHGEKH
Trigger: ATGTTTTTCTCCATGGACCCAACACCTTTGAACCAA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAACCCACCTGGGGGAATaGAGAGAGAACTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGETHLGE*RENSAI
Trigger: TATTGCTGAGTTCTCTCTCCATTCCCCCAGGTGGGT...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACCGCGTCTCAGGTGTTaGCGATTTGCCTTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEPRLRC*RFAFSR
Trigger: TCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGTTTAGATGGCTGTGGTaGGGAGAGAAATTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVFRWLW*GEKFLA
Trigger: GGCCAAGAATTTCTCTCCCCACCACAGCCATCTAAA...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTAGTAAAATGTTCCCTTaGTGCCCTATCAAACAGATC +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFSKMFP*CPIKQI
Trigger: GATCTGTTTGATAGGGCACCAAGGGAACATTTTACT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATGGTCTTTTAGGAAGTaGCATGACGTGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEWSFRK*HDVGSE
Trigger: TTCAGAGCCCACGTCATGCCACTTCCTAAAAGACCA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGGACCAGAAGTGAGCTaGATCTTTTCTCTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVGPEVS*IFSLAK
Trigger: CTTAGCCAGAGAAAAGATCCAGCTCACTTCTGGTCC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACCTGAGTGGGACTGAATaGAATAGGTGGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDLSGTE*NRWFWE
Trigger: TTCCCAAAACCACCTATTCCATTCAGTCCCACTCAG...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTTTCTACCCAGAGAATaGTGGTTTCCAAAGTATGGT +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFFLPRE*WFPKYG
Trigger: ACCATACTTTGGAAACCACCATTCTCTGGGTAGAAA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 72 bp GCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTaGTGCGTGGCAGTGATGAAGAAGGCTTTACTGATG +
Preference number: 4 (lower is better)
Translates to: AFTQIELPGTSL*CVAVMKKALLM
Trigger: CATCAGTAAAGCCTTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACGGATGTGGATCGTGCTaGGCTCTTGCATGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHGCGSC*ALACCA
Trigger: TGCGCAGCATGCAAGAGCTCAGCACGATCCACATCC...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATTCCTGTTTTGCTTGTaGCAACTTGGCCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEFLFCL*QLGLFA
Trigger: AGCAAAGAGGCCAAGTTGTCACAAGCAAAACAGGAA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACGGCACATACCAGAGTTaGCCGCGTCTCAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHGTYQS*PRLRCW
Trigger: CCAACACCTGAGACGCGGTCAACTCTGGTATGTGCC...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCTCTGCTACAAGCAGTaGACAATGGTTAGGAGGATT +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVLCYKQ*TMVRRI
Trigger: AATCCTCCTAACCATTGTTCACTGCTTGTAGCAGAG...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATCAGTCACTGGCCAATaGGTTAGACTTATGAAACCA +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKSVTGQ*VRLMKP
Trigger: TGGTTTCATAAGTCTAACTCATTGGCCAGTGACTGA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACTTCACTCCTTTGCTTaGACAGAGGTGATGAGGCTT +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGELHSFA*TEVMRL
Trigger: AAGCCTCATCACCTCTGTGCAAGCAAAGGAGTGAAG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGTGAGGGACTTCTTGTaGATGGGTAGTTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKVRDFL*MGSSAL
Trigger: CAATGCAGAACTACCCATCCACAAGAAGTCCCTCAC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGGGGTTTCACCATGTTaGCCAAGTTGGTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEGVSPC*PSWSST
Trigger: AGTTGAAGACCAACTTGGCCAACATGGTGAAACCCC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAATGGTCTTTTAGGAAGTaGCATGACGTGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEWSFRK*HDVGSE
Trigger: TTCAGAGCCCACGTCATGCCACTTCCTAAAAGACCA...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAAAAGCTCAAGGGTCATaGCTATTGGCCCCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEKAQGS*LLAPRK
Trigger: TTTTCTGGGGGCCAATAGCCATGACCCTTGAGCTTT...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGTGTTTCCAGAGATCTTaGTTCACGGTGGTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKCFQRS*FTVVLN
Trigger: ATTCAGAACCACCGTGAACCAAGATCTCTGGAAACA...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTGTTTCCAGAGATCTTaGTTCACGGTGGTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDCFQRS*FTVVLN
Trigger: ATTCAGAACCACCGTGAACCAAGATCTCTGGAAACA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACTGAGAATATCTATTaGTCTTTTGAAAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VSQGYVHASSVNLRCPFATENIY*SFERES
Trigger: AGACTCCCTTTCAAAAGACCAATAGATATTCTCAGT...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGGGAGACTGGAAAACTaGAATTCTTTAGTAACCTCG +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKGRLEN*NSLVTS
Trigger: CGAGGTTACTAAAGAATTCCAGTTTTCCAGTCTCCC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAACATCAGGTACAGCAGTaGCACACGACTCAATACTGT +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKHQVQQ*HTTQYC
Trigger: ACAGTATTGAGTCGTGTGCCACTGCTGTACCTGATG...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTTGTTTAATCCAGATTaGATACATCAGGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: GYVHASSVNLRCPFATSFLFNPD*IHQVQQ
Trigger: CTGCTGTACCTGATGTATCCAATCTGGATTAAACAA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATTCTTTCCCAGAAACTaGAACTGCAAACACGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKFFPRN*NCKHEW
Trigger: CCACTCGTGTTTGCAGTTTCAGTTTCTGGGAAAGAA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAAGAGTTGCCTCTGGTTTaGTATAAGTCAGAGGAATCT +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEELPLV*YKSEES
Trigger: AGATTCCTCTGACTTATATCAAACCAGAGGCAACTC...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATTGAAGCATTTTTCTTaGGGCACACAGGCTTACCCT +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKLKHFS*GTQAYP
Trigger: AGGGTAAGCCTGTGTGCCTCAAGAAAAATGCTTCAA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAAGGGTGCAAGCTAGTTaGATAGATATGTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGERVQAS*IDMLSR
Trigger: CCTGGACAACATATCTATTCAACTAGCTTGCACCCT...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGACTCCTGACTTCAGGTaGTCTGTTCACCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLTPDFR*SVHLGF
Trigger: GAAGCCGAGGTGAACAGATCACCTGAAGTCAGGAGT...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATTTTTGGACCAGAAGTaGGCTGGATCTTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKFLDQK*AGSFLW
Trigger: CCAGAGAAAAGATCCAGCTCACTTCTGGTCCAAAAA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATCAGTCACTGGCCAATaGGTTAGACTTATGAAACCA +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEESVTGQ*VRLMKP
Trigger: TGGTTTCATAAGTCTAACTCATTGGCCAGTGACTGA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAATGTTTTCCCCTCTCTaGATCAAGGATTTAGCTACT +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKMFSPL*IKDLAT
Trigger: AGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACAT...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGACGGTGGTTCTGAATTaGATACTTCCCTCCCCCACG +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLTVVLN*ILPSPT
Trigger: CGTGGGGGAGGGAAGTATTCAATTCAGAACCACCGT...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAACCTTCTTTTGTGCCCTaGGTTTATCAGCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKPSFVP*VYQLSD
Trigger: ATCAGAGAGCTGATAAACGCAGGGCACAAAAGAAGG...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGTTCTGCTCAAACATCTaGTCATCAATAAACTCGTGG +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKFCSNI*SSINSW
Trigger: CCACGAGTTTATTGATGAGCAGATGTTTGAGCAGAA...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACTCTCCATGCAGTTCTaGTCAAACATCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGELSMQF*SNICSS
Trigger: TGATGAGCAGATGTTTGAGCAGAACTGCATGGAGAG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACACTCTTTCCTCCTCTaGAGTTGCATTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEHSFLL*SCIHTD
Trigger: ATCTGTGTGAATGCAACTGCAGAGGAGGAAAGAGTG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAACCTCTGTGTGGGAGTTaGCTCTGGTTTGATATAAGT +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKPLCGS*LWFDIS
Trigger: ACTTATATCAAACCAGAGGCAACTCCCACACAGAGG...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGCACTCAAGGAGCAGATaGAGCCGAAGATCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLHSRSR*SRRSSL
Trigger: CAGGGAAGATCTTCGGCTCCATCTGCTCCTTGAGTG...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATCATCAATAAACTCGTaGTTCTTGATGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKSSINS*FLMVEV
Trigger: AACCTCCACCATCAAGAACCACGAGTTTATTGATGA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302127.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACAACATTGCTGGCTATaGAAGGAATGTTCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEQHCWL*KECSCW
Trigger: CCAACACGAACATTCCTTCCATAGCCAGCAATGTTG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGAGCCTTCCAAGTAGCTaGGATTACAGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLSLPSS*DYRGPP
Trigger: TGGTGGACCCCTGTAATCCCAGCTACTTGGAAGGCT...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGAAAATCCTGATATCCTaGTTTTTCAGTCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKKILIS*FFSHWP
Trigger: TGGCCAGTGACTGAAAAACCAGGATATCAGGATTTT...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAACTACCCAGAGAATGGTaGTTTCCAAAGTATGGTTTG +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEELPREW*FPKYGL
Trigger: CAAACCATACTTTGGAAACCACCATTCTCTGGGTAG...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACCCTCGTTGTTGGTCATaGCCAGACCGATGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHPRCWS*PDRCSR
Trigger: CCTACTACATCGGTCTGGTCATGACCAACAACGAGG...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACCCAGTCAGATCTTATaGAGCATAACTAAGATACTT +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSPSQIL*SITKIL
Trigger: AAGTATCTTAGTTATGCTTCATAAGATCTGACTGGG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGGGTTCACGGTGGTTCTaGATTGAATACTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLGSRWF*IEYFPP
Trigger: GGGAGGGAAGTATTCAATTCAGAACCACCGTGAACC...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAACAACTTGGCCTCTTTaGTGCTCTTGGTCTTGTATT +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKTTWPL*CSWSCI
Trigger: AATACAAGACCAAGAGCAGCAAAGAGGCCAAGTTGT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCATTCCTCCTCTGCAGTTaGATTCACACAGATAGAACT +
Preference number: 4 (lower is better)
Translates to: IPELTASQVLAICLFKIPFLLCS*IHTDRT
Trigger: AGTTCTATCTGTGTGAATGCAACTGCAGAGGAGGAA...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCAAAATGCATTGTTTTaGTTCAAAGGTGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVQNALF*FKGVGS
Trigger: GGACCCAACACCTTTGAACCAAAACAATGCATTTTG...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGGGGAGAGAAATTCTTaGCCTACAATTAAACAGCTA +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVGERNS*PTIKQL
Trigger: TAGCTGTTTAATTGTAGGCCAAGAATTTCTCTCCCC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGAGTAAAATGTTCCCTTaGTGCCCTATCAAACAGATC +
Preference number: 4 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVSKMFP*CPIKQI
Trigger: GATCTGTTTGATAGGGCACCAAGGGAACATTTTACT...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAAAGTATGGTTTGTATTaGTACAGTCAGGTGATTTCC +
Preference number: 4 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSKYGLY*YSQVIS
Trigger: GGAAATCACCTGACTGTACCAATACAAACCATACTT...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATTTCTACCCAGAGAATaGTGGTTTCCAAAGTATGGT +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEFLPRE*WFPKYG
Trigger: ACCATACTTTGGAAACCACCATTCTCTGGGTAGAAA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGAGATGTCTTAAGTCCTaGATTGCAATAATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKRCLKS*IAIMVL
Trigger: CAGAACCATTATTGCAATCCAGGACTTAAGACATCT...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAAGATGTCTTAAGTCCTaGATTGCAATAATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKRCLKS*IAIMVL
Trigger: CAGAACCATTATTGCAATCCAGGACTTAAGACATCT...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCAGTGCAATATAATGTaGAGGAAAAATCCTAGGACA +
Preference number: 4 (lower is better)
Translates to: WHIPELTASQVLAICLFKQCNIM*RKNPRT
Trigger: TGTCCTAGGATTTTTCCTCCACATTATATTGCACTG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAGGGAGACTGGAAAACTaGAATTCTTTAGTAACCTCG +
Preference number: 4 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKGRLEN*NSLVTS
Trigger: CGAGGTTACTAAAGAATTCCAGTTTTCCAGTCTCCC...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 72 bp CATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTaGCCTTTTCAAGATTCCAGTGTGATAAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: HTRVDRVSGVGD*PFQDSSVINLF
Trigger: GAACAGATTTATCACACTGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAATGTTTTCCCCTCTCTaGATCAAGGATTTAGCTACT +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEMFSPL*IKDLAT
Trigger: AGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACAT...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATATCTATTGGTCTTTTaGAAGGGAGTCTATGCAGTT +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEYLLVF*KGVYAV
Trigger: AACTGCATAGACTCCCTTTCAAAAGACCAATAGATA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACCTGTCATTAAATAACTaGATGACCTTGAACAAGTCA +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDLSLNN*MTLNKS
Trigger: TGACTTGTTCAAGGTCATGCAGTTATTTAATGACAG...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAACTGATGTGTTTAGGTTaGTTGTGTGTATACACATGT +
Preference number: 4 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEELMCLG*LCVYTC
Trigger: ACATGTGTATACACACAACCAACCTAAACACATCAG...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACGCTGGATCTTTTCTCTaGCTAAGGCTACAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHAGSFL*LRLQWR
Trigger: CCTCCACTGTAGCCTTAGCCAGAGAAAAGATCCAGC...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACAATAAAAGTTTGTCATaGTTACCATGCCAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDNKSLS*LPCQVV
Trigger: CACTACTTGGCATGGTAACCATGACAAACTTTTATT...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAATACTTGCTTTTGCTTTaGAGCATTTTTCTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGEYLLLL*SIFLEA
Trigger: TGCCTCAAGAAAAATGCTTCAAAGCAAAAGCAAGTA...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGCAGGTGTTGGCGATTTaGCTTTTCAAGATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLQVLAI*LFKIPV
Trigger: CACTGGAATCTTGAAAAGGCAAATCGCCAACACCTG...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAACTGATGTGTTTAGGTTaGTTGTGTGTATACACATGT +
Preference number: 4 (lower is better)
Translates to: FDISQRNLGPRTTALSGELMCLG*LCVYTC
Trigger: ACATGTGTATACACACAACCAACCTAAACACATCAG...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACTTCCTGTTTTGCTTGTaGCAACTTGGCCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHFLFCL*QLGLFA
Trigger: AGCAAAGAGGCCAAGTTGTCACAAGCAAAACAGGAA...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACTTGAAGCATTTTTCTTaGGGCACACAGGCTTACCCT +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHLKHFS*GTQAYP
Trigger: AGGGTAAGCCTGTGTGCCTCAAGAAAAATGCTTCAA...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACTTGTATTTTCCTCACTaGGGTCTCCAGAAACGACTG +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHLYFPH*GLQKRL
Trigger: CAGTCGTTTCTGGAGACCCCAGTGAGGAAAATACAA...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 72 bp GAAGGAGAAATAGTACAGAGTTTGTTTCCAGAGATCTaGGTTCACGGTGGTTCTGAATTGAATACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: EGEIVQSLFPEI*VHGGSELNTSL
Trigger: GAGGGAAGTATTCAATTCAGAACCACCGTGAACCAAGATCTCTGGAAACAAACTCTGTACTATTTCTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGGAACTCAGCAATAACTaGCTTCTTAGCCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLELSNN*LLSLKA
Trigger: AGCTTTTAGGCTAAGAAGTCAGTTATTGCTGAGTTC...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACTGTCAAAGTGGTTCATaGACTATGAAAGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHCQSGS*TMKAQG
Trigger: CCCTTGAGCTTTCATAGTTCATGAACCACTTTGACA...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGACAGTATGGATTCTTTaGTGGATCTTCTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLTVWIL*WIFSKA
Trigger: TGCTTTGGAGAAGATCCATCAAAGAATCCATACTGT...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGCAAAATGCATTGTTTTaGTTCAAAGGTGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLQNALF*FKGVGS
Trigger: GGACCCAACACCTTTGAACCAAAACAATGCATTTTG...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGACAAGCAGTGAACAATaGTTAGGAGGATTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLTSSEQ*LGGFQK
Trigger: TTTCTGGAATCCTCCTAACCATTGTTCACTGCTTGT...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATTTTAGATGGCTGTGGTaGGGAGAGAAATTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNFRWLW*GEKFLA
Trigger: GGCCAAGAATTTCTCTCCCCACCACAGCCATCTAAA...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACACAGTATGGATTCTTTaGTGGATCTTCTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHTVWIL*WIFSKA
Trigger: TGCTTTGGAGAAGATCCATCAAAGAATCCATACTGT...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATCTTGCTGTGCAGGTATaGATTCGAACTGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNLAVQV*IRTACF
Trigger: AAAACAGGCAGTTCGAATGCATACCTGCACAGCAAG...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACTTCTGCTCAAACATCTaGTCATCAATAAACTCGTGG +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHFCSNI*SSINSW
Trigger: CCACGAGTTTATTGATGAGCAGATGTTTGAGCAGAA...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATTCTCAGTCCGTCGTCTaGTTTCAAATTAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNSQSVV*FQIKAG
Trigger: TCCAGCCTTAATTTGAAAGCAGACGACGGACTGAGA...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGGGGTGTGGTAGAAAATaGATTAGACTAATAGCCAAA +
Preference number: 4 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLGCGRK*IRLIAK
Trigger: TTTGGCTATTAGTCTAATGCATTTTCTACCACACCC...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACTTGGTTCAAAGGTGTTaGGTCCATGGAGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHLVQRC*VHGEKH
Trigger: ATGTTTTTCTCCATGGACCCAACACCTTTGAACCAA...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
3UTR CAA 72 bp TCTTTTGAAAGGGAGTCTATGCAGTTAGTCCTGAGCTaGGCACTAGTTATGAAAATAGGAGATGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SFERESMQLVLS*ALVMKIGDEGE
Trigger: TTCTCCTTCATCTCCTATTTTCATAACTAGTGCCAAGCTCAGGACTAACTGCATAGACTCCCTTTCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGAGTTGCCTCTGGTTTaGTATAAGTCAGAGGAATCT +
Preference number: 4 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNELPLV*YKSEES
Trigger: AGATTCCTCTGACTTATATCAAACCAGAGGCAACTC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR TCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGAACTCAGCAATAACTaGCTTCTTAGCCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNELSNN*LLSLKA
Trigger: AGCTTTTAGGCTAAGAAGTCAGTTATTGCTGAGTTC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR GCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACCTGTCATTAAATAACTaGATGACCTTGAACAAGTCA +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHLSLNN*MTLNKS
Trigger: TGACTTGTTCAAGGTCATGCAGTTATTTAATGACAG...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATACAAGCAGTGAACAATaGTTAGGAGGATTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNTSSEQ*LGGFQK
Trigger: TTTCTGGAATCCTCCTAACCATTGTTCACTGCTTGT...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CCA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAATAAAAGTTTGTCATaGTTACCATGCCAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHNKSLS*LPCQVV
Trigger: CACTACTTGGCATGGTAACCATGACAAACTTTTATT...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS CCA 90 bp CAGAGCTCGCGGGGTGGAAGTGGCGTCGGGCAGGACCAGATGGACTaGCCCCCAGCCTCTGGTAGACACACCGCCGGCTCGCCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QSSRGGSGVGQDQMD*PPASGRHTAGSPSW
Trigger: CCAGCTCGGCGAGCCGGCGGTGTGTCTACCAGAGGCTGGGGGCCAGTCCATCTGGTCCTGCCCGACGCCACTTCCACCCCGCGAGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS CCA 90 bp AGGCAGCCAGGCCGCAACTCCGGCCGCCATGGTGACTCCAGCTCTTaGGCCGGCAGCCGCGCGGACGCTAGGCACACCAGCTTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: RQPGRNSGRHGDSSS*AGSRADARHTSLEL
Trigger: TAACTCCAAGCTGGTGTGCCTAGCGTCCGCGCGGCTGCCGGCCCAAGAGCTGGAGTCACCATGGCGGCCGGAGTTGCGGCCTGGCTGCCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCCCGCACGGCAGCTCCTaGCTGCCCGGGACCGTGCCG +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRPHGSS*LPGTVP
Trigger: CGGCACGGTCCCGGGCAGCAAGGAGCTGCCGTGCGG...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CCA 90 bp GACTGGCCCCCAGCCTCTGGTAGACACACCGCCGGCTCGCCGAGCTaGAGAACTTTGCGAAGCGCCCCAAACCGCTCCGGGTTTCCACTT +
Preference number: 5 (lower is better)
Translates to: DWPPASGRHTAGSPS*RTLRSAPNRSGFPL
Trigger: AAGTGGAAACCCGGAGCGGTTTGGGGCGCTTCGCAAAGTTCTCCAGCTCGGCGAGCCGGCGGTGTGTCTACCAGAGGCTGGGGGCCAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGGGGCCCAGGCTCAGTaGACCTCACCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRGAQAQ*TSPTWG
Trigger: CCCCCAGGTGGGTGAGGTCAACTGAGCCTGGGCCCC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS CCA 90 bp GCCCGCCACATGGTCTGGCGGAAGCTGAGCGAGGGCATGGACTCCTaGTTGTTCTCCGAGTCGTTGTCGTCCATGAGCCGCTCGGCGTTC +
Preference number: 5 (lower is better)
Translates to: ARHMVWRKLSEGMDS*LFSESLSSMSRSAF
Trigger: GAACGCCGAGCGGCTCATGGACGACAACGACTCGGAGAACAACCAGGAGTCCATGCCCTCGCTCAGCTTCCGCCAGACCATGTGGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCAGGGGCATGGGGCAGTaGGCCACCGGCATCCACCCG +
Preference number: 5 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPRGMGQ*ATGIHP
Trigger: CGGGTGGATGCCGGTGGCCAACTGCCCCATGCCCCT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTCCGCACGGCAGCTCCTaGCTGCCCGGGACCGTGCCG +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFPHGSS*LPGTVP
Trigger: CGGCACGGTCCCGGGCAGCAAGGAGCTGCCGTGCGG...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS TCA 90 bp GCTCCAGCGTGGTCCTCCAGGTCTGGAACCTCCGCCCACTCACGTTaGGGACAATCAGCTCATCCTGCCGCTTGTTCTTGTCGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: APAWSSRSGTSAHSR*GQSAHPAACSCRPG
Trigger: CCCCGGCCGACAAGAACAAGCGGCAGGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGAGGTTCCAGACCTGGAGGACCACGCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTAGGGGCATGGGGCAGTaGGCCACCGGCATCCACCCG +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFARGMGQ*ATGIHP
Trigger: CGGGTGGATGCCGGTGGCCAACTGCCCCATGCCCCT...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTCCTGCCGCTTGTTCTaGTCGGCCGGGGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFSCRLF*SAGARG
Trigger: GCCCCTGGCCCCGGCCGACAAGAACAAGCGGCAGGA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAACCGCACGGCAGCTCCTaGCTGCCCGGGACCGTGCCG +
Preference number: 5 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKPHGSS*LPGTVP
Trigger: CGGCACGGTCCCGGGCAGCAAGGAGCTGCCGTGCGG...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCAGCTCCAGCGCCTCGTaGAGGAGCCCGTTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPSSSAS*RSPLRL
Trigger: CAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGAAGGAATGTTCGTGTaGGGGCCTGGGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPREGMFV*GPGLAG
Trigger: CCCTGCCAGCCCAGGCCCCAACACGAACATTCCTTC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGGGCCGCGACGGCCCTaGGCGTCACGTAGAGACCTT +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAGPRRP*ASRRDL
Trigger: AAGGTCTCTACGTGACGCCAAGGGCCGTCGCGGCCC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS GCA 90 bp CTCCAGCGCCTCGTTGAGGAGCCCGTTGCGCTTGCTGTGCAGGTATaGATTCGAACTGCCTGTTTTGGCCACACGGATCCTGGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: LQRLVEEPVALAVQV*IRTACFGHTDPGKA
Trigger: CGCCTTGCCAGGATCCGTGTGGCCAAAACAGGCAGTTCGAATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 90 bp CCCGTCAGCTCCAGCGCCTCGTTGAGGAGCCCGTTGCGCTTGCTGTaGAGGTATGCATTCGAACTGCCTGTTTTGGCCACACGGATCCTG +
Preference number: 5 (lower is better)
Translates to: PVSSSASLRSPLRLL*RYAFELPVLATRIL
Trigger: CAGGATCCGTGTGGCCAAAACAGGCAGTTCGAATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCTGACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 90 bp AGGGAGGGCTGCTCACTGCCCTGGATGTGGATCGTGCTGAGCTCTTaGATGCTGCGCAGGCGAGTAGCTGGCAGGTTAGAATTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: REGCSLPWMWIVLSS*MLRRRVAGRLELGR
Trigger: CCTGCCCAATTCTAACCTGCCAGCTACTCGCCTGCGCAGCATGCAAGAGCTCAGCACGATCCACATCCAGGGCAGTGAGCAGCCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 90 bp CAGCCTCTGGTAGACACACCGCCGGCTCGCCGAGCTGGAGAACTTTaGGAAGCGCCCCAAACCGCTCCGGGTTTCCACTTTCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: QPLVDTPPARRAGEL*EAPQTAPGFHFQPF
Trigger: AAATGGCTGAAAGTGGAAACCCGGAGCGGTTTGGGGCGCTTCGCAAAGTTCTCCAGCTCGGCGAGCCGGCGGTGTGTCTACCAGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTAGCTCCAGCGCCTCGTaGAGGAGCCCGTTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFASSSAS*RSPLRL
Trigger: CAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCT...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTCCTGCCGCTTGTTCTaGTCGGCCGGGGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDSCRLF*SAGARG
Trigger: GCCCCTGGCCCCGGCCGACAAGAACAAGCGGCAGGA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTAGCTCATCCTGCCGCTaGTTCTTGTCGGCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFSSSCR*FLSAGA
Trigger: GGCCCCGGCCGACAAGAACAAGCGGCAGGATGAGCT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTTGTTCTCCGAGTCGTaGTCGTCCATGAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRLFSES*SSMSRS
Trigger: CGAGCGGCTCATGGACGACAACGACTCGGAGAACAA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGGCATGGACTCCTGGTaGTTCTCCGAGTCGTTGTCG +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRGMDSW*FSESLS
Trigger: CGACAACGACTCGGAGAACAACCAGGAGTCCATGCC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTCGTTGAGGAGCCCGTaGCGCTTGCTGTGCAGGTAT +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRSLRSP*RLLCRY
Trigger: ATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGGGGGCCCAGGCTCAGTaGACCTCACCCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: WHIPELTASQVLAICLFKGAQAQ*TSPTWG
Trigger: CCCCCAGGTGGGTGAGGTCAACTGAGCCTGGGCCCC...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCCGAGCTGGAGAACTTaGCGAAGCGCCCCAAACCGC +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAPSWRT*RSAPNR
Trigger: GCGGTTTGGGGCGCTTCGCAAAGTTCTCCAGCTCGG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR CAA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGAGGGGCATGGGGCAGTaGGCCACCGGCATCCACCCG +
Preference number: 5 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVRGMGQ*ATGIHP
Trigger: CGGGTGGATGCCGGTGGCCAACTGCCCCATGCCCCT...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACCGGACACGTCCTCGTaGTTGGTCATGACCAGACCG +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLPDTSS*LVMTRP
Trigger: CGGTCTGGTCATGACCAACAACGAGGACGTGTCCGG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTGGCACATACCAGAGTaGACCGCGTCTCAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRWHIPE*TASQVL
Trigger: CAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTCTTCATGGTGCTGTTaGGGCTCCGAGGGTCATGGG +
Preference number: 5 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPSSWCC*GSEGHG
Trigger: CCCATGACCCTCGGAGCCCAAACAGCACCATGAAGA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTGGAACCTCAGCCTGTaGCTGACATATCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRWNLSL*LTYQGC
Trigger: GCAGCCCTGATATGTCAGCAACAGGCTGAGGTTCCA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATCCTGCCGCTTGTTCTaGTCGGCCGGGGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKSCRLF*SAGARG
Trigger: GCCCCTGGCCCCGGCCGACAAGAACAAGCGGCAGGA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGAGCTCATCCTGCCGCTaGTTCTTGTCGGCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: WHIPELTASQVLAICLFKSSSCR*FLSAGA
Trigger: GGCCCCGGCCGACAAGAACAAGCGGCAGGATGAGCT...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCTCCGCCCACTCACGTaGAGGACAATCAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFALRPLT*RTISSS
Trigger: GGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGAG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACTCCGCCCACTCACGTaGAGGACAATCAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLLRPLT*RTISSS
Trigger: GGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGAG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGGGATGCTTGTGAACTaGCTGGCCGAGGAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFGMLVN*LAEEPF
Trigger: GAAGGGCTCCTCGGCCAGCAAGTTCACAAGCATCCC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTCGAACTGCCTGTTTaGGCCACACGGATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPFELPV*ATRILA
Trigger: TGCCAGGATCCGTGTGGCCAAAACAGGCAGTTCGAA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTAGGAGCCCGTTGCGCTaGCTGTGCAGGTATGCATTC +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFARSPLR*LCRYAF
Trigger: GAATGCATACCTGCACAGCAAGCGCAACGGGCTCCT...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGGGATGTTTTGCAGTTaGGTCTCAGTCCGTCGTCTG +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRGMFCS*VSVRRL
Trigger: CAGACGACGGACTGAGACCAAACTGCAAAACATCCC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGGCATGGACTCCTGGTaGTTCTCCGAGTCGTTGTCG +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFGMDSW*FSESLS
Trigger: CGACAACGACTCGGAGAACAACCAGGAGTCCATGCC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCACAGTGAGGGACTTCTaGTGGATGGGTAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRTVRDF*WMGSSA
Trigger: TGCAGAACTACCCATCCACAAGAAGTCCCTCACTGT...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAGAAGGAATGTTCGTGTaGGGGCCTGGGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKEGMFV*GPGLAG
Trigger: CCCTGCCAGCCCAGGCCCCAACACGAACATTCCTTC...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTACCAGGCACAAGTCTGTaGTGCGTGGCAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLPGTSL*CVAVMK
Trigger: CTTCATCACTGCCACGCACAACAGACTTGTGCCTGG...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGCTAGGCACACCAGCTaGGAGTTAGTTCAGCAAACC +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLARHTS*ELVQQT
Trigger: GGTTTGCTGAACTAACTCCAAGCTGGTGTGCCTAGC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000315987.6
CDS-3UTR CAA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTCCTTGGTGTCCTCGTaGAAGAAGAACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPSLVSS*KKNSFS
Trigger: GGAGAAGGAGTTCTTCTTCAACGAGGACACCAAGGA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTCGAAGAAGTACTCCTaGGTGTCCTCGTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRSKKYS*VSSLKK
Trigger: CTTCTTCAACGAGGACACCAAGGAGTACTTCTTCGA...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGACACGTCCTCGTTGTaGGTCATGACCAGACCGATG +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFDTSSL*VMTRPM
Trigger: CATCGGTCTGGTCATGACCAACAACGAGGACGTGTC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACCGGACACGTCCTCGTaGTTGGTCATGACCAGACCG +
Preference number: 5 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSPDTSS*LVMTRP
Trigger: CGGTCTGGTCATGACCAACAACGAGGACGTGTCCGG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTAAGGCGGGCCTTCTTTaGTGCCCTGCGTTTATCAGC +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFKAGLL*CPAFIS
Trigger: GCTGATAAACGCAGGGCACAAAAGAAGGCCCGCCTT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTATGAGTGAGGTGGTCTaGCCCATGTGCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAMSEVV*PMCSSS
Trigger: AGAAGAGGAGCACATGGGCAAGACCACCTCACTCAT...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGAAGGAATGTTCGTGTaGGGGCCTGGGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVEGMFV*GPGLAG
Trigger: CCCTGCCAGCCCAGGCCCCAACACGAACATTCCTTC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCGAGACCTTGACAACATaGCTGGCTATGGAAGGAATG +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRETLTT*LAMEGM
Trigger: CATTCCTTCCATAGCCAGCAATGTTGTCAAGGTCTC...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTACAAGGCGGAGACCTaGACAACATTGCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPYKAET*TTLLAM
Trigger: CATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGTA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAACCGCGTCTCAGGTGTaGGCGATTTGCCTTTTCAAG +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLTASQV*AICLFK
Trigger: CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS TCA 90 bp ACCCACTCTGGCCCTCTGTCCAGTGGTTTTACAAGGCGGAGACCTTaGCAACATTGCTGGCTATGGAAGGAATGTTCGTGTTGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: THSGPLSSGFTRRRP*QHCWLWKECSCWGL
Trigger: CAGGCCCCAACACGAACATTCCTTCCATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGTAAAACCACTGGACAGAGGGCCAGAGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGCTCCGCCCACTCACGTaGAGGACAATCAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: WHIPELTASQVLAICLFKLRPLT*RTISSS
Trigger: GGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGAG...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCATTGTTCTCCGAGTCGTaGTCGTCCATGAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSLFSES*SSMSRS
Trigger: CGAGCGGCTCATGGACGACAACGACTCGGAGAACAA...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAAGGGATGCTTGTGAACTaGCTGGCCGAGGAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEGMLVN*LAEEPF
Trigger: GAAGGGCTCCTCGGCCAGCAAGTTCACAAGCATCCC...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGAGGAGCCCGTTGCGCTaGCTGTGCAGGTATGCATTC +
Preference number: 5 (lower is better)
Translates to: WHIPELTASQVLAICLFKRSPLR*LCRYAF
Trigger: GAATGCATACCTGCACAGCAAGCGCAACGGGCTCCT...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACAGTGAGGGACTTCTaGTGGATGGGTAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFATVRDF*WMGSSA
Trigger: TGCAGAACTACCCATCCACAAGAAGTCCCTCACTGT...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAACAGTGAGGGACTTCTaGTGGATGGGTAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLTVRDF*WMGSSA
Trigger: TGCAGAACTACCCATCCACAAGAAGTCCCTCACTGT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGTGATCTGGGATGTTTaGCAGTTTGGTCTCAGTCCG +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLVIWDV*QFGLSP
Trigger: CGGACTGAGACCAAACTGCAAAACATCCCAGATCAC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGTGATCTGGGATGTTTaGCAGTTTGGTCTCAGTCCG +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAVIWDV*QFGLSP
Trigger: CGGACTGAGACCAAACTGCAAAACATCCCAGATCAC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCATTGCCGTGTGGTCACTaGGCAGCTCTGCACAGGTCA +
Preference number: 5 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSLPCGH*AALHRS
Trigger: TGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAA...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTTCTTCACTCCTTTGCTaGCACAGAGGTGATGAGGCT +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFASSLLC*HRGDEA
Trigger: AGCCTCATCACCTCTGTGCAAGCAAAGGAGTGAAGA...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGAGGGCAGGAAAGGACTaGTCACTAACCCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WHIPELTASQVLAICLFKRAGKD*SLTLRP
Trigger: GGGCCTCAGGGTTAGTGACAAGTCCTTTCCTGCCCT...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTTCCTTGGTGTCCTCGTaGAAGAAGAACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFSLVSS*KKNSFS
Trigger: GGAGAAGGAGTTCTTCTTCAACGAGGACACCAAGGA...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATTGTTCTCCGAGTCGTaGTCGTCCATGAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEELFSES*SSMSRS
Trigger: CGAGCGGCTCATGGACGACAACGACTCGGAGAACAA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTGAGACCTTGACAACATaGCTGGCTATGGAAGGAATG +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAETLTT*LAMEGM
Trigger: CATTCCTTCCATAGCCAGCAATGTTGTCAAGGTCTC...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGACAACTTGGCCTCTTaGCTGCTCTTGGTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLDNLAS*LLLVLY
Trigger: ATACAAGACCAAGAGCAGCAAAGAGGCCAAGTTGTC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTATTTGCTTGTGACAACTaGGCCTCTTTGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLFACDN*ASLLLL
Trigger: CAAGAGCAGCAAAGAGGCCAAGTTGTCACAAGCAAA...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTTTTGCTTGTGACAACTaGGCCTCTTTGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAFACDN*ASLLLL
Trigger: CAAGAGCAGCAAAGAGGCCAAGTTGTCACAAGCAAA...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACCCAGGCACAAGTCTGTaGTGCGTGGCAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDPGTSL*CVAVMK
Trigger: CTTCATCACTGCCACGCACAACAGACTTGTGCCTGG...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTCAGGTGTTGGCGATTaGCCTTTTCAAGATTCCAGT +
Preference number: 5 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPSGVGD*PFQDSS
Trigger: ACTGGAATCTTGAAAAGGCAAATCGCCAACACCTGA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAGCAAACCCCTTTTTCTaGCAGTGCGATTTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLANPFF*QCDFRS
Trigger: AGACCTGAAATCGCACTGCAAGAAAAAGGGGTTTGC...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS GCA 90 bp TGTGGTGATCTGGGATGTTTTGCAGTTTGGTCTCAGTCCGTCGTCTaGTTTCAAATTAAGGCTGGAGCGACTGGTTGTGAGGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: CGDLGCFAVWSQSVV*FQIKAGATGCEGGL
Trigger: CAGCCCTCCCTCACAACCAGTCGCTCCAGCCTTAATTTGAAAGCAGACGACGGACTGAGACCAAACTGCAAAACATCCCAGATCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGAAGGCGGGCCTTCTTTaGTGCCCTGCGTTTATCAGC +
Preference number: 5 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVKAGLL*CPAFIS
Trigger: GCTGATAAACGCAGGGCACAAAAGAAGGCCCGCCTT...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAAGGAGCCCGTTGCGCTaGCTGTGCAGGTATGCATTC +
Preference number: 5 (lower is better)
Translates to: FDISQRNLGPRTTALSGERSPLR*LCRYAF
Trigger: GAATGCATACCTGCACAGCAAGCGCAACGGGCTCCT...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCATCGTTGAGGAGCCCGTaGCGCTTGCTGTGCAGGTAT +
Preference number: 5 (lower is better)
Translates to: IPELTASQVLAICLFKIPSLRSP*RLLCRY
Trigger: ATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGA...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATCGTTGAGGAGCCCGTaGCGCTTGCTGTGCAGGTAT +
Preference number: 5 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKSLRSP*RLLCRY
Trigger: ATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACATGAGTGAGGTGGTCTaGCCCATGTGCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDMSEVV*PMCSSS
Trigger: AGAAGAGGAGCACATGGGCAAGACCACCTCACTCAT...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTAATAAACTCGTGGTTCTaGATGGTGGAGGTTCGTACA +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLINSWF*MVEVRT
Trigger: TGTACGAACCTCCACCATCAAGAACCACGAGTTTAT...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000315987.6
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGAGACCTTGACAACATaGCTGGCTATGGAAGGAATG +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFETLTT*LAMEGM
Trigger: CATTCCTTCCATAGCCAGCAATGTTGTCAAGGTCTC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGACAACTTGGCCTCTTaGCTGCTCTTGGTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFDNLAS*LLLVLY
Trigger: ATACAAGACCAAGAGCAGCAAAGAGGCCAAGTTGTC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGGTTCAAAGGTGTaGGGTCCATGGAGAAAAACA +
Preference number: 5 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPFGSKV*GPWRKT
Trigger: TGTTTTTCTCCATGGACCCAACACCTTTGAACCAAA...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATTGCCGTGTGGTCACTaGGCAGCTCTGCACAGGTCA +
Preference number: 5 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKLPCGH*AALHRS
Trigger: TGACCTGTGCAGAGCTGCCAAGTGACCACACGGCAA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACACGGTGGTTCTGAATaGAATACTTCCCTCCCCCAC +
Preference number: 5 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSHGGSE*NTSLPH
Trigger: GTGGGGGAGGGAAGTATTCAATTCAGAACCACCGTG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACCACGGTGGTTCTGAATaGAATACTTCCCTCCCCCAC +
Preference number: 5 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDHGGSE*NTSLPH
Trigger: GTGGGGGAGGGAAGTATTCAATTCAGAACCACCGTG...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCTATTGTTTCCAGAGATCTaGGTTCACGGTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LPSSGPSEMQYHRAMSTLLFPEI*VHGGSE
Trigger: TTCAGAACCACCGTGAACCAAGATCTCTGGAAACAA...TAGCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS CCA 90 bp GGGGATGCTGATGATGGCTGTGGTGATCTGGGATGTTTTGCAGTTTaGTCTCAGTCCGTCGTCTGCTTTCAAATTAAGGCTGGAGCGACT +
Preference number: 5 (lower is better)
Translates to: GDADDGCGDLGCFAV*SQSVVCFQIKAGAT
Trigger: AGTCGCTCCAGCCTTAATTTGAAAGCAGACGACGGACTGAGACCAAACTGCAAAACATCCCAGATCACCACAGCCATCATCAGCATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp TTTGATATAAGTCAGAGGAATCTTGGTCCCCGTACCACTGCCCTCTCTGGAGAAGACACGTCCTCGTTGTaGGTCATGACCAGACCGATG +
Preference number: 5 (lower is better)
Translates to: FDISQRNLGPRTTALSGEDTSSL*VMTRPM
Trigger: CATCGGTCTGGTCATGACCAACAACGAGGACGTGTC...TTCTCCAGAGAGGGCAGTGGTACGGGGACCAAGATTCCTCTGACTTATATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAAAAGGCGGGCCTTCTTTaGTGCCCTGCGTTTATCAGC +
Preference number: 5 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKKAGLL*CPAFIS
Trigger: GCTGATAAACGCAGGGCACAAAAGAAGGCCCGCCTT...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATTCGAACTGCCTGTTTaGGCCACACGGATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKFELPV*ATRILA
Trigger: TGCCAGGATCCGTGTGGCCAAAACAGGCAGTTCGAA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTATGGGTAGTTCTGCATaGAACTCTCCATGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFMGSSA*NSPCSS
Trigger: AGAACTGCATGGAGAGTTCAATGCAGAACTACCCAT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGGGGATGTTTTGCAGTTaGGTCTCAGTCCGTCGTCTG +
Preference number: 5 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVGMFCS*VSVRRL
Trigger: CAGACGACGGACTGAGACCAAACTGCAAAACATCCC...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GATGCAGTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCACAAAATGCATTGTTTaGGTTCAAAGGTGTTGGGTC +
Preference number: 5 (lower is better)
Translates to: DAVSQGYVHASSVNLRCPTKCIV*VQRCWV
Trigger: GACCCAACACCTTTGAACCAAAACAATGCATTTTGT...GGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATACTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGACCGCGTCTCAGGTGTaGGCGATTTGCCTTTTCAAG +
Preference number: 5 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVTASQV*AICLFK
Trigger: CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGT...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCATGGCACATACCAGAGTaGACCGCGTCTCAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: IPELTASQVLAICLFKIPWHIPE*TASQVL
Trigger: CAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TGGCACATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGTCTTCACTCCTTTGCTaGCACAGAGGTGATGAGGCT +
Preference number: 5 (lower is better)
Translates to: WHIPELTASQVLAICLFKSSLLC*HRGDEA
Trigger: AGCCTCATCACCTCTGTGCAAGCAAAGGAGTGAAGA...CTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTATGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAACCACCTCGAAACCTTTaGAACCTACAGGGTCAATCG +
Preference number: 5 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKPPRNL*NLQGQS
Trigger: CGATTGACCCTGTAGGTTCAAAAGGTTTCGAGGTGG...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCCTCCCTTCCTCTGGCCCCAGTGAGATGCAGTATCACAGGGCTATGTCCACGCAAAGTATGGTTTGTATaGGTACAGTCAGGTGATTTC +
Preference number: 5 (lower is better)
Translates to: PSLPLAPVRCSITGLCPRKVWFV*VQSGDF
Trigger: GAAATCACCTGACTGTACCAATACAAACCATACTTT...GCGTGGACATAGCCCTGTGATACTGCATCTCACTGGGGCCAGAGGAAGGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATCCTTGGTGTCCTCGTaGAAGAAGAACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEESLVSS*KKNSFS
Trigger: GGAGAAGGAGTTCTTCTTCAACGAGGACACCAAGGA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATCGAAGAAGTACTCCTaGGTGTCCTCGTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKSKKYS*VSSLKK
Trigger: CTTCTTCAACGAGGACACCAAGGAGTACTTCTTCGA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATACAAGGCGGAGACCTaGACAACATTGCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEYKAET*TTLLAM
Trigger: CATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGTA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTATCACAGGGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTCAGTTAGTCCTGAGCTaGGCACTAGTTATGAAAATA +
Preference number: 5 (lower is better)
Translates to: VSQGYVHASSVNLRCPFAQLVLS*ALVMKI
Trigger: TATTTTCATAACTAGTGCCAAGCTCAGGACTAACTG...AGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCCCTGTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCATACAAGGCGGAGACCTaGACAACATTGCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: IPELTASQVLAICLFKIPYKAET*TTLLAM
Trigger: CATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGTA...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTACAAAATGCATTGTTTaGGTTCAAAGGTGTTGGGTC +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFTKCIV*VQRCWV
Trigger: GACCCAACACCTTTGAACCAAAACAATGCATTTTGT...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAGCTTTATGGTGGGTCTaGAAGGAAGGGTCCATAGCA +
Preference number: 5 (lower is better)
Translates to: IPELTASQVLAICLFKIPALWWV*KEGSIA
Trigger: TGCTATGGACCCTTCCTTCAAGACCCACCATAAAGC...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTTTGAAGCATTTTTCTaGAGGCACACAGGCTTACCC +
Preference number: 5 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDFEAFF*RHTGLP
Trigger: GGGTAAGCCTGTGTGCCTCAAGAAAAATGCTTCAAA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAACCACCTCGAAACCTTTaGAACCTACAGGGTCAATCG +
Preference number: 5 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKPPRNL*NLQGQS
Trigger: CGATTGACCCTGTAGGTTCAAAAGGTTTCGAGGTGG...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCATTGTTTCCAGAGATCTaGGTTCACGGTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSLFPEI*VHGGSE
Trigger: TTCAGAACCACCGTGAACCAAGATCTCTGGAAACAA...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGTTCGAACTGCCTGTTTaGGCCACACGGATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLFELPV*ATRILA
Trigger: TGCCAGGATCCGTGTGGCCAAAACAGGCAGTTCGAA...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAAATAAACTCGTGGTTCTaGATGGTGGAGGTTCGTACA +
Preference number: 5 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEINSWF*MVEVRT
Trigger: TGTACGAACCTCCACCATCAAGAACCACGAGTTTAT...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302127.5
CDS-3UTR CAA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGGGCAGGAAAGGACTaGTCACTAACCCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHRAGKD*SLTLRP
Trigger: GGGCCTCAGGGTTAGTGACAAGTCCTTTCCTGCCCT...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GGCTATGTCCACGCTAGCAGCGTGAACCTCAGGTGCCCCTTTGCTACCTCTTTTGAAATAGTACAGAGTTaGTTTCCAGAGATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: GYVHASSVNLRCPFATSFEIVQS*FPEILV
Trigger: AACCAAGATCTCTGGAAACAAACTCTGTACTATTTC...AAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCGTGGACATAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACTCTTCATGGTGCTGTTaGGGCTCCGAGGGTCATGGG +
Preference number: 5 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHSSWCC*GSEGHG
Trigger: CCCATGACCCTCGGAGCCCAAACAGCACCATGAAGA...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGGCTAGGCACACCAGCTaGGAGTTAGTTCAGCAAACC +
Preference number: 5 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLARHTS*ELVQQT
Trigger: GGTTTGCTGAACTAACTCCAAGCTGGTGTGCCTAGC...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302127.5
CDS-3UTR CAA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACGACACGTCCTCGTTGTaGGTCATGACCAGACCGATG +
Preference number: 5 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHDTSSL*VMTRPM
Trigger: CATCGGTCTGGTCATGACCAACAACGAGGACGTGTC...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATCCGGACACGTCCTCGTaGTTGGTCATGACCAGACCG +
Preference number: 5 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNPDTSS*LVMTRP
Trigger: CGGTCTGGTCATGACCAACAACGAGGACGTGTCCGG...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAATATTTTCTTCCTGTTTaGCTTGTGACAACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKYFLPV*LVTTWP
Trigger: AGGCCAAGTTGTCACAAGCAAAACAGGAAGAAAATA...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGCGTGGCAGTGATGAAGAATTTGGTTCAAAGGTGTaGGGTCCATGGAGAAAAACA +
Preference number: 5 (lower is better)
Translates to: HTDRTPRHKSVVRGSDEEFGSKV*GPWRKT
Trigger: TGTTTTTCTCCATGGACCCAACACCTTTGAACCAAA...TTCTTCATCACTGCCACGCACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CAAACACGAGTGGTTCCAACCCCAAGGGAAGTACCTCTGTTCTGTGAGGTAGACTACAGTATGGATTCTTaGATGGATCTTCTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: QTRVVPTPREVPLFCEVDYSMDS*MDLLQS
Trigger: GCTTTGGAGAAGATCCATCAAAGAATCCATACTGTA...GTCTACCTCACAGAACAGAGGTACTTCCCTTGGGGTTGGAACCACTCGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCACAGTTAGTCCTGAGCTaGGCACTAGTTATGAAAATA +
Preference number: 5 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSQLVLS*ALVMKI
Trigger: TATTTTCATAACTAGTGCCAAGCTCAGGACTAACTG...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGGCTTTATGGTGGGTCTaGAAGGAAGGGTCCATAGCA +
Preference number: 5 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLALWWV*KEGSIA
Trigger: TGCTATGGACCCTTCCTTCAAGACCCACCATAAAGC...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp GTAAGCTCAGAGGGCAAGAACCACTCCATTCCCACATTAGGGGACCCAGAGAAAAAAGTATGGTTTGTATaGGTACAGTCAGGTGATTTC +
Preference number: 5 (lower is better)
Translates to: VSSEGKNHSIPTLGDPEKKVWFV*VQSGDF
Trigger: GAAATCACCTGACTGTACCAATACAAACCATACTTT...TTTCTCTGGGTCCCCTAATGTGGGAATGGAGTGGTTCTTGCCCTCTGAGCTTAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTCCTCTGCAGTTGCATTCACACAGATAGAACTCCCAGGCACAAGTCTGTTGTGTTTCCAAAGTATGGTTaGTATTGGTACAGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLCSCIHTDRTPRHKSVVFPKYG*YWYSQV
Trigger: CACCTGACTGTACCAATACAAACCATACTTTGGAAA...CACAACAGACTTGTGCCTGGGAGTTCTATCTGTGTGAATGCAACTGCAGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTGCCCACATTCTGGTTAGGTGCCACCTCGAAACCTTTTGAACCTACAGGGTCAATATCTATTGGTCTTTaGAAAGGGAGTCTATGCAGT +
Preference number: 5 (lower is better)
Translates to: LPTFWLGATSKPFEPTGSISIGL*KGSLCS
Trigger: ACTGCATAGACTCCCTTTCAAAAGACCAATAGATAT...TGACCCTGTAGGTTCAAAAGGTTTCGAGGTGGCACCTAACCAGAATGTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAACCCTCACAAAATGCATaGTTTTGGTTCAAAGGTGTT +
Preference number: 5 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKPSQNA*FWFKGV
Trigger: AACACCTTTGAACCAAAACAATGCATTTTGTGAGGG...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CTTTTAGGAAGTGGCATGACGTGGGCTCTGAACGTGAAGTGGAAGGAACACAAATACAGTATGGATTCTTaGATGGATCTTCTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: LLGSGMTWALNVKWKEHKYSMDS*MDLLQS
Trigger: GCTTTGGAGAAGATCCATCAAAGAATCCATACTGTA...TTTGTGTTCCTTCCACTTCACGTTCAGAGCCCACGTCATGCCACTTCCTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATATGAGTGAGGTGGTCTaGCCCATGTGCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNMSEVV*PMCSSS
Trigger: AGAAGAGGAGCACATGGGCAAGACCACCTCACTCAT...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGGGATGTTTTGCAGTTaGGTCTCAGTCCGTCGTCTG +
Preference number: 5 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNGMFCS*VSVRRL
Trigger: CAGACGACGGACTGAGACCAAACTGCAAAACATCCC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGTTTGAAGCATTTTTCTaGAGGCACACAGGCTTACCC +
Preference number: 5 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLFEAFF*RHTGLP
Trigger: GGGTAAGCCTGTGTGCCTCAAGAAAAATGCTTCAAA...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAATATCTATTGGTCTTTaGAAAGGGAGTCTATGCAGT +
Preference number: 5 (lower is better)
Translates to: IPELTASQVLAICLFKIPISIGL*KGSLCS
Trigger: ACTGCATAGACTCCCTTTCAAAAGACCAATAGATAT...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp ATACCAGAGTTGACCGCGTCTCAGGTGTTGGCGATTTGCCTTTTCAAGATTCCAAGCATTGGGATATTTTaGCCTTATAGTTACCTGGTA +
Preference number: 5 (lower is better)
Translates to: IPELTASQVLAICLFKIPSIGIF*PYSYLV
Trigger: TACCAGGTAACTATAAGGCAAAAATATCCCAATGCT...TGGAATCTTGAAAAGGCAAATCGCCAACACCTGAGACGCGGTCAACTCTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACATGGGTAGTTCTGCATaGAACTCTCCATGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHMGSSA*NSPCSS
Trigger: AGAACTGCATGGAGAGTTCAATGCAGAACTACCCAT...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGTGATCTGGGATGTTTaGCAGTTTGGTCTCAGTCCG +
Preference number: 5 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNVIWDV*QFGLSP
Trigger: CGGACTGAGACCAAACTGCAAAACATCCCAGATCAC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp TTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGACTGTTTCCAAAGTATGGTTaGTATTGGTACAGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: FPSLNQGFSYFTYYHHRLFPKYG*YWYSQV
Trigger: CACCTGACTGTACCAATACAAACCATACTTTGGAAA...CAGTCTGTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATATGGGTAGTTCTGCATaGAACTCTCCATGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNMGSSA*NSPCSS
Trigger: AGAACTGCATGGAGAGTTCAATGCAGAACTACCCAT...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CATGTTTTCCCCTCTCTGAATCAAGGATTTAGCTACTTTACCTACTACCATCACAGCATTGGGATATTTTaGCCTTATAGTTACCTGGTA +
Preference number: 5 (lower is better)
Translates to: HVFPSLNQGFSYFTYYHHSIGIF*PYSYLV
Trigger: TACCAGGTAACTATAAGGCAAAAATATCCCAATGCT...GTGATGGTAGTAGGTAAAGTAGCTAAATCCTTGATTCAGAGAGGGGAAAACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATTATTTTCTTCCTGTTTaGCTTGTGACAACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNYFLPV*LVTTWP
Trigger: AGGCCAAGTTGTCACAAGCAAAACAGGAAGAAAATA...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATCCCTCACAAAATGCATaGTTTTGGTTCAAAGGTGTT +
Preference number: 5 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNPSQNA*FWFKGV
Trigger: AACACCTTTGAACCAAAACAATGCATTTTGTGAGGG...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS-3UTR CAA 90 bp CCATCACAGACTGTCATAAGAACCACAAGGAGTATAAAAGGTATGCTTCAAAATGAAATAGTACAGAGTTaGTTTCCAGAGATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: PSQTVIRTTRSIKGMLQNEIVQS*FPEILV
Trigger: AACCAAGATCTCTGGAAACAAACTCTGTACTATTTC...ATTTTGAAGCATACCTTTTATACTCCTTGTGGTTCTTATGACAGTCTGTGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000369697.5
CDS GCA 72 bp CCACCGAGTAGCGCTCCCCGCACGGCAGCTCCTTGCTaGCCGGGACCGTGCCGCACGGCACCGTCTCCACCA +
Preference number: 6 (lower is better)
Translates to: PPSSAPRTAAPC*PGPCRTAPSPP
Trigger: TGGTGGAGACGGTGCCGTGCGGCACGGTCCCGGGCAGCAAGGAGCTGCCGTGCGGGGAGCGCTACTCGGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CCA 72 bp GGCCGCAACTCCGGCCGCCATGGTGACTCCAGCTCTTaGGCCGGCAGCCGCGCGGACGCTAGGCACACCAGC +
Preference number: 6 (lower is better)
Translates to: GRNSGRHGDSSS*AGSRADARHTS
Trigger: GCTGGTGTGCCTAGCGTCCGCGCGGCTGCCGGCCCAAGAGCTGGAGTCACCATGGCGGCCGGAGTTGCGGCC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CCA 72 bp CGGGGTGGAAGTGGCGTCGGGCAGGACCAGATGGACTaGCCCCCAGCCTCTGGTAGACACACCGCCGGCTCG +
Preference number: 6 (lower is better)
Translates to: RGGSGVGQDQMD*PPASGRHTAGS
Trigger: CGAGCCGGCGGTGTGTCTACCAGAGGCTGGGGGCCAGTCCATCTGGTCCTGCCCGACGCCACTTCCACCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS CCA 72 bp CCAGCCTCTGGTAGACACACCGCCGGCTCGCCGAGCTaGAGAACTTTGCGAAGCGCCCCAAACCGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: PASGRHTAGSPS*RTLRSAPNRSG
Trigger: CCCGGAGCGGTTTGGGGCGCTTCGCAAAGTTCTCCAGCTCGGCGAGCCGGCGGTGTGTCTACCAGAGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS CCA 72 bp TCTTTCGATCCCTCTCCCCGGGGCCGCGACGGCCCTTaGCGTCACGTAGAGACCTTTCCCAGAGCTCGCGGG +
Preference number: 6 (lower is better)
Translates to: SFDPSPRGRDGP*RHVETFPRARG
Trigger: CCCGCGAGCTCTGGGAAAGGTCTCTACGTGACGCCAAGGGCCGTCGCGGCCCCGGGGAGAGGGATCGAAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS CAA 72 bp GTCTTTCGATCCCTCTCCCCGGGGCCGCGACGGCCCTaGGCGTCACGTAGAGACCTTTCCCAGAGCTCGCGG +
Preference number: 6 (lower is better)
Translates to: VFRSLSPGPRRP*ASRRDLSQSSR
Trigger: CCGCGAGCTCTGGGAAAGGTCTCTACGTGACGCCAAGGGCCGTCGCGGCCCCGGGGAGAGGGATCGAAAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS CAA 72 bp TGGGCCGGCAGCCGCGCGGACGCTAGGCACACCAGCTaGGAGTTAGTTCAGCAAACCCTTCCGCGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: WAGSRADARHTS*ELVQQTLPRSQ
Trigger: CTGGCTTCGCGGAAGGGTTTGCTGAACTAACTCCAAGCTGGTGTGCCTAGCGTCCGCGCGGCTGCCGGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302127.5
CDS TCA 72 bp CCTCTTCTGGGGTGCCCGTCAGCTCCAGCGCCTCGTTaGGGAGCCCGTTGCGCTTGCTGTGCAGGTATGCAT +
Preference number: 6 (lower is better)
Translates to: PLLGCPSAPAPR*GARCACCAGMH
Trigger: ATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCTGACGGGCACCCCAGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 72 bp CTCCGCCCACTCACGTTGAGGACAATCAGCTCATCCTaGCGCTTGTTCTTGTCGGCCGGGGCCAGGGGCATG +
Preference number: 6 (lower is better)
Translates to: LRPLTLRTISSS*RLFLSAGARGM
Trigger: CATGCCCCTGGCCCCGGCCGACAAGAACAAGCGGCAGGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 72 bp TGCTGGCTCTCGATGAGTGAGGTGGTCTTGCCCATGTaGTCCTCTTCTGGGGTGCCCGTCAGCTCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: CWLSMSEVVLPM*SSSGVPVSSSA
Trigger: GGCGCTGGAGCTGACGGGCACCCCAGAAGAGGAGCACATGGGCAAGACCACCTCACTCATCGAGAGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp TCCTCTTCTGGGGTGCCCGTCAGCTCCAGCGCCTCGTaGAGGAGCCCGTTGCGCTTGCTGTGCAGGTATGCA +
Preference number: 6 (lower is better)
Translates to: SSSGVPVSSSAS*RSPLRLLCRYA
Trigger: TGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCTGACGGGCACCCCAGAAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp GGTAGACACACCGCCGGCTCGCCGAGCTGGAGAACTTaGCGAAGCGCCCCAAACCGCTCCGGGTTTCCACTT +
Preference number: 6 (lower is better)
Translates to: GRHTAGSPSWRT*RSAPNRSGFPL
Trigger: AAGTGGAAACCCGGAGCGGTTTGGGGCGCTTCGCAAAGTTCTCCAGCTCGGCGAGCCGGCGGTGTGTCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS CAA 90 bp CGCTCCAGCGTGGTCCTCCAGGTCTGGAACCTCCGCCCACTCACGTaGAGGACAATCAGCTCATCCTGCCGCTTGTTCTTGTCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: RSSVVLQVWNLRPLT*RTISSSCRLFLSAG
Trigger: CCCGGCCGACAAGAACAAGCGGCAGGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGAGGTTCCAGACCTGGAGGACCACGCTGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 90 bp GGGGTGCCCGTCAGCTCCAGCGCCTCGTTGAGGAGCCCGTTGCGCTaGCTGTGCAGGTATGCATTCGAACTGCCTGTTTTGGCCACACGG +
Preference number: 6 (lower is better)
Translates to: GVPVSSSASLRSPLR*LCRYAFELPVLATR
Trigger: CCGTGTGGCCAAAACAGGCAGTTCGAATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCTGACGGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 90 bp CCAGCCTCTGGTAGACACACCGCCGGCTCGCCGAGCTGGAGAACTTaGCGAAGCGCCCCAAACCGCTCCGGGTTTCCACTTTCAGCCATT +
Preference number: 6 (lower is better)
Translates to: PASGRHTAGSPSWRT*RSAPNRSGFPLSAI
Trigger: AATGGCTGAAAGTGGAAACCCGGAGCGGTTTGGGGCGCTTCGCAAAGTTCTCCAGCTCGGCGAGCCGGCGGTGTGTCTACCAGAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS TCA 72 bp GGTTCTCGAAGGCCCGCCACATGGTCTGGCGGAAGCTaGGCGAGGGCATGGACTCCTGGTTGTTCTCCGAGT +
Preference number: 6 (lower is better)
Translates to: GSRRPATWSGGS*ARAWTPGCSPS
Trigger: ACTCGGAGAACAACCAGGAGTCCATGCCCTCGCTCAGCTTCCGCCAGACCATGTGGCGGGCCTTCGAGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp GTGCCCGTCAGCTCCAGCGCCTCGTTGAGGAGCCCGTaGCGCTTGCTGTGCAGGTATGCATTCGAACTGCCT +
Preference number: 6 (lower is better)
Translates to: VPVSSSASLRSP*RLLCRYAFELP
Trigger: AGGCAGTTCGAATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCTGACGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 90 bp TCTTCTGGGGTGCCCGTCAGCTCCAGCGCCTCGTTGAGGAGCCCGTaGCGCTTGCTGTGCAGGTATGCATTCGAACTGCCTGTTTTGGCC +
Preference number: 6 (lower is better)
Translates to: SSGVPVSSSASLRSP*RLLCRYAFELPVLA
Trigger: GGCCAAAACAGGCAGTTCGAATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCTGACGGGCACCCCAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 90 bp GAGGGAGGGCTGCTCACTGCCCTGGATGTGGATCGTGCTGAGCTCTaGCATGCTGCGCAGGCGAGTAGCTGGCAGGTTAGAATTGGGCAG +
Preference number: 6 (lower is better)
Translates to: EGGLLTALDVDRAEL*HAAQASSWQVRIGQ
Trigger: CTGCCCAATTCTAACCTGCCAGCTACTCGCCTGCGCAGCATGCAAGAGCTCAGCACGATCCACATCCAGGGCAGTGAGCAGCCCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CCA 72 bp ATGGTCTGGCGGAAGCTGAGCGAGGGCATGGACTCCTaGTTGTTCTCCGAGTCGTTGTCGTCCATGAGCCGC +
Preference number: 6 (lower is better)
Translates to: MVWRKLSEGMDS*LFSESLSSMSR
Trigger: GCGGCTCATGGACGACAACGACTCGGAGAACAACCAGGAGTCCATGCCCTCGCTCAGCTTCCGCCAGACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp AGCGAGGGCATGGACTCCTGGTTGTTCTCCGAGTCGTaGTCGTCCATGAGCCGCTCGGCGTTCTCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: SEGMDSWLFSES*SSMSRSAFSLL
Trigger: CAAGAGGGAGAACGCCGAGCGGCTCATGGACGACAACGACTCGGAGAACAACCAGGAGTCCATGCCCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp TGGGCCGGCAGCCGCGCGGACGCTAGGCACACCAGCTaGGAGTTAGTTCAGCAAACCCCTTTTTCTTGCAGT +
Preference number: 6 (lower is better)
Translates to: WAGSRADARHTS*ELVQQTPFSCS
Trigger: ACTGCAAGAAAAAGGGGTTTGCTGAACTAACTCCAAGCTGGTGTGCCTAGCGTCCGCGCGGCTGCCGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315987.6
CDS TCA 72 bp GCAGTGCAGCAGGTGATGATGCTGGCTCTCGATGAGTaGGGTGGTCTTGCCCATGTGCTCCTCTTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: AVQQVMMLALDE*GGLAHVLLFWG
Trigger: ACCCCAGAAGAGGAGCACATGGGCAAGACCACCTCACTCATCGAGAGCCAGCATCATCACCTGCTGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 72 bp TCCAGCGCCTCGTTGAGGAGCCCGTTGCGCTTGCTGTaGAGGTATGCATTCGAACTGCCTGTTTTGGCCACA +
Preference number: 6 (lower is better)
Translates to: SSASLRSPLRLL*RYAFELPVLAT
Trigger: TGTGGCCAAAACAGGCAGTTCGAATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 72 bp TGCTCACTGCCCTGGATGTGGATCGTGCTGAGCTCTTaGATGCTGCGCAGGCGAGTAGCTGGCAGGTTAGAA +
Preference number: 6 (lower is better)
Translates to: CSLPWMWIVLSS*MLRRRVAGRLE
Trigger: TTCTAACCTGCCAGCTACTCGCCTGCGCAGCATGCAAGAGCTCAGCACGATCCACATCCAGGGCAGTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp GTGGTCCTCCAGGTCTGGAACCTCCGCCCACTCACGTaGAGGACAATCAGCTCATCCTGCCGCTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: VVLQVWNLRPLT*RTISSSCRLFL
Trigger: CAAGAACAAGCGGCAGGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGAGGTTCCAGACCTGGAGGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp GTCAGCTCCAGCGCCTCGTTGAGGAGCCCGTTGCGCTaGCTGTGCAGGTATGCATTCGAACTGCCTGTTTTG +
Preference number: 6 (lower is better)
Translates to: VSSSASLRSPLR*LCRYAFELPVL
Trigger: CAAAACAGGCAGTTCGAATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS TCA 72 bp TGGTCCTCCAGGTCTGGAACCTCCGCCCACTCACGTTaGGGACAATCAGCTCATCCTGCCGCTTGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: WSSRSGTSAHSR*GQSAHPAACSC
Trigger: ACAAGAACAAGCGGCAGGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGAGGTTCCAGACCTGGAGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 72 bp CTCGTTGAGGAGCCCGTTGCGCTTGCTGTGCAGGTATaGATTCGAACTGCCTGTTTTGGCCACACGGATCCT +
Preference number: 6 (lower is better)
Translates to: LVEEPVALAVQV*IRTACFGHTDP
Trigger: AGGATCCGTGTGGCCAAAACAGGCAGTTCGAATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 72 bp AAATTAAGGCTGGAGCGACTGGTTGTGAGGGAGGGCTaGTCACTGCCCTGGATGTGGATCGTGCTGAGCTCT +
Preference number: 6 (lower is better)
Translates to: KLRLERLVVREG*SLPWMWIVLSS
Trigger: AGAGCTCAGCACGATCCACATCCAGGGCAGTGAGCAGCCCTCCCTCACAACCAGTCGCTCCAGCCTTAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 90 bp TGGCCCTCTGTCCAGTGGTTTTACAAGGCGGAGACCTTGACAACATaGCTGGCTATGGAAGGAATGTTCGTGTTGGGGCCTGGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: WPSVQWFYKAETLTT*LAMEGMFVLGPGLA
Trigger: TGCCAGCCCAGGCCCCAACACGAACATTCCTTCCATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGTAAAACCACTGGACAGAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CCA 72 bp ATGCATTCGAACTGCCTGTTTTGGCCACACGGATCCTaGCAAGGCGGGCCTTCTTTTGTGCCCTGCGTTTAT +
Preference number: 6 (lower is better)
Translates to: MHSNCLFWPHGS*QGGPSFVPCVY
Trigger: ATAAACGCAGGGCACAAAAGAAGGCCCGCCTTGCCAGGATCCGTGTGGCCAAAACAGGCAGTTCGAATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 90 bp TACCCACTCTGGCCCTCTGTCCAGTGGTTTTACAAGGCGGAGACCTaGACAACATTGCTGGCTATGGAAGGAATGTTCGTGTTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: YPLWPSVQWFYKAET*TTLLAMEGMFVLGP
Trigger: AGGCCCCAACACGAACATTCCTTCCATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGTAAAACCACTGGACAGAGGGCCAGAGTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 90 bp GGGGGAGTGGGGATGCTGATGATGGCTGTGGTGATCTGGGATGTTTaGCAGTTTGGTCTCAGTCCGTCGTCTGCTTTCAAATTAAGGCTG +
Preference number: 6 (lower is better)
Translates to: GGVGMLMMAVVIWDV*QFGLSPSSAFKLRL
Trigger: CAGCCTTAATTTGAAAGCAGACGACGGACTGAGACCAAACTGCAAAACATCCCAGATCACCACAGCCATCATCAGCATCCCCACTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS TCA 72 bp GGCCCTCTGTCCAGTGGTTTTACAAGGCGGAGACCTTaGCAACATTGCTGGCTATGGAAGGAATGTTCGTGT +
Preference number: 6 (lower is better)
Translates to: GPLSSGFTRRRP*QHCWLWKECSC
Trigger: ACACGAACATTCCTTCCATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGTAAAACCACTGGACAGAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp TGGCCCTCTGTCCAGTGGTTTTACAAGGCGGAGACCTaGACAACATTGCTGGCTATGGAAGGAATGTTCGTG +
Preference number: 6 (lower is better)
Translates to: WPSVQWFYKAET*TTLLAMEGMFV
Trigger: CACGAACATTCCTTCCATAGCCAGCAATGTTGTCAAGGTCTCCGCCTTGTAAAACCACTGGACAGAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 72 bp CTGGGATGTTTTGCAGTTTGGTCTCAGTCCGTCGTCTaGTTTCAAATTAAGGCTGGAGCGACTGGTTGTGAG +
Preference number: 6 (lower is better)
Translates to: LGCFAVWSQSVV*FQIKAGATGCE
Trigger: CTCACAACCAGTCGCTCCAGCCTTAATTTGAAAGCAGACGACGGACTGAGACCAAACTGCAAAACATCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp GGGATGCTGATGATGGCTGTGGTGATCTGGGATGTTTaGCAGTTTGGTCTCAGTCCGTCGTCTGCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: GMLMMAVVIWDV*QFGLSPSSAFK
Trigger: TTTGAAAGCAGACGACGGACTGAGACCAAACTGCAAAACATCCCAGATCACCACAGCCATCATCAGCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS CAA 72 bp ACAGTGAGGGACTTCTTGTGGATGGGTAGTTCTGCATaGAACTCTCCATGCAGTTCTGCTCAAACATCTGCT +
Preference number: 6 (lower is better)
Translates to: TVRDFLWMGSSA*NSPCSSAQTSA
Trigger: AGCAGATGTTTGAGCAGAACTGCATGGAGAGTTCAATGCAGAACTACCCATCCACAAGAAGTCCCTCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302127.5
ENST00000315987.6
ENST00000369697.5
CDS GCA 72 bp TGCATTGAACTCTCCATGCAGTTCTGCTCAAACATCTaGTCATCAATAAACTCGTGGTTCTTGATGGTGGAG +
Preference number: 6 (lower is better)
Translates to: CIELSMQFCSNI*SSINSWFLMVE
Trigger: CTCCACCATCAAGAACCACGAGTTTATTGATGAGCAGATGTTTGAGCAGAACTGCATGGAGAGTTCAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302127.5
ENST00000315987.6