RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCND1 (Homo sapiens)

Ensembl gene IDs: ENSG00000102057

Ensembl transcript IDs: ENST00000218176.4, ENST00000376477.5, ENST00000419374.1

Found 399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGCTGGGAGAGTaGGGCCAGTCCCAGTGTGCTAGGGCAAGGAGGCCAGGGGCCTGT +
Preference number: 1 (lower is better)
Translates to: LRAQGEEHAGVQLGE*GQSQCARARRPGAC
Trigger: ACAGGCCCCTGGCCTCCTTGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR TCA 90 bp ATGGTAGAATTTGTGCTATCTGAGTGTGTGTTGGGAGAGGCAGCCTaGCCCCTCAGGCAAGGCCTGGGGATGGCAGGTCGCTGCAGAGGC +
Preference number: 1 (lower is better)
Translates to: MVEFVLSECVLGEAA*PLRQGLGMAGRCRG
Trigger: GCCTCTGCAGCGACCTGCCATCCCCAGGCCTTGCCTGAGGGGTCAGGCTGCCTCTCCCAACACACACTCAGATAGCACAAATTCTACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CCA 90 bp CCCAGGCCGGAGCCCCTGATGCTTCTGGACTGTTGCCCAAGAACATaGAATCAGCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGT +
Preference number: 1 (lower is better)
Translates to: PRPEPLMLLDCCPRT*NQPMISKYSPALAG
Trigger: ACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGCTGATTCCATGTTCTTGGGCAACAGTCCAGAAGCATCAGGGGCTCCGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR GCA 90 bp GGATGGCAGGTCGCTGCAGAGGCCACAGCCCATGAAGCCTGTGTTTaGATTCCAAGCTTCAGAATCTGGGAATTGTTGGGCCAGATGGAG +
Preference number: 1 (lower is better)
Translates to: GWQVAAEATAHEACV*IPSFRIWELLGQME
Trigger: CTCCATCTGGCCCAACAATTCCCAGATTCTGAAGCTTGGAATGCAAACACAGGCTTCATGGGCTGTGGCCTCTGCAGCGACCTGCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR GCA 90 bp TGGAATCAGCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTaGCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCCAG +
Preference number: 1 (lower is better)
Translates to: WNQPMISKYSPALAG*QALISASPDSSPTQ
Trigger: CTGGGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGCTGATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR GCA 90 bp AAGAACATGGAATCAGCCCATGATCTCCAAATACAGCCCAGCTCTTaGTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: KNMESAHDLQIQPSS*WLPGSYLSQSRLQP
Trigger: GGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGCTGATTCCATGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR GCA 90 bp GTTCAGAAACATCCCAGGCCGGAGCCCCTGATGCTTCTGGACTGTTaGCCAAGAACATGGAATCAGCCCATGATCTCCAAATACAGCCCA +
Preference number: 1 (lower is better)
Translates to: VQKHPRPEPLMLLDC*PRTWNQPMISKYSP
Trigger: TGGGCTGTATTTGGAGATCATGGGCTGATTCCATGTTCTTGGGCAACAGTCCAGAAGCATCAGGGGCTCCGGCCTGGGATGTTTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CCA 90 bp AACATGGAATCAGCCCATGATCTCCAAATACAGCCCAGCTCTTGCTaGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAAC +
Preference number: 1 (lower is better)
Translates to: NMESAHDLQIQPSSC*LPGSYLSQSRLQPN
Trigger: GTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGCTGATTCCATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CCA 90 bp GAGGTGGCCCCTCTGATTAGGGCAGATGTAAATGCTGCAGCAAACTaGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCT +
Preference number: 1 (lower is better)
Translates to: EVAPLIRADVNAAAN*SEALHNDTAAAAIA
Trigger: AGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCAGTTTGCTGCAGCATTTACATCTGCCCTAATCAGAGGGGCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR TCA 90 bp GCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGAATATGTaGAAAGGAATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: AEFWKVTQEGEERNM*KGIVGEEEEEKFLL
Trigger: CAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAATTCCTTTTCACATATTCCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGGGGTGCCCAAGCCTaGCCCTCTCTGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: YSPALAGCQALISASPDSRGAQA*PSLPPK
Trigger: TTTGGGAGGCAGAGAGGGGCAGGCTTGGGCACCCCT...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGAGGGGTGCCCAAGCCTaGCCCTCTCTGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQRGAQA*PSLPPK
Trigger: TTTGGGAGGCAGAGAGGGGCAGGCTTGGGCACCCCT...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGGAGGCCAGGGGCCTGTaGAAGCCCAGTGCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: CRIKALPSSESPRGGACREARGL*KPSASA
Trigger: AGCTGAAGCACTGGGCTTCCACAGGCCCCTGGCCTC...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCGGCAGATGTAAATGCTaGAGCAAACTGGTCAGAGGC +
Preference number: 2 (lower is better)
Translates to: ALAGCQALISASPDSSPTGRCKC*SKLVRG
Trigger: GCCTCTGACCAGTTTGCTGCAGCATTTACATCTGCC...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CAA 90 bp ATGGAATCAGCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTaGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCCA +
Preference number: 2 (lower is better)
Translates to: MESAHDLQIQPSSCW*PGSYLSQSRLQPNP
Trigger: TGGGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGCTGATTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR TCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCTGGGCCAGATGGAGATaGGGACCTCTCGTAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAWARWR*GPLVEA
Trigger: GGCCTCTACGAGAGGTCCTCATCTCCATCTGGCCCA...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCACTGGTCAGAGGCTTTaGATAATGACACGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: YSPALAGCQALISASPDSTGQRL*IMTRQQ
Trigger: CTGCTGCCGTGTCATTATGCAAAGCCTCTGACCAGT...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCTATCTGAGTGTGTGTTaGGAGAGGCAGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLYLSVC*ERQPDP
Trigger: GGGGTCAGGCTGCCTCTCCCAACACACACTCAGATA...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CAA 90 bp AGTTCAGAAACATCCCAGGCCGGAGCCCCTGATGCTTCTGGACTGTaGCCCAAGAACATGGAATCAGCCCATGATCTCCAAATACAGCCC +
Preference number: 2 (lower is better)
Translates to: SSETSQAGAPDASGL*PKNMESAHDLQIQP
Trigger: GGGCTGTATTTGGAGATCATGGGCTGATTCCATGTTCTTGGGCAACAGTCCAGAAGCATCAGGGGCTCCGGCCTGGGATGTTTCTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGAGCAGAGGACAGGGTTaGGGGGTCCATTTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERSRGQG*GVHFQQ
Trigger: CTGCTGGAAATGGACCCCGCAACCCTGTCCTCTGCT...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCTGCCTCCCAAAAATATaGCTTTGGAAAGGAGTTCCC +
Preference number: 2 (lower is better)
Translates to: ALAGCQALISASPDSSPTCLPKI*LWKGVP
Trigger: GGGAACTCCTTTCCAAAGCCATATTTTTGGGAGGCA...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CAA 90 bp TCAACTCTCCTTCTTAGGCTAGAGCTCAGATGTCGGATCAAAGCTTaGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCA +
Preference number: 2 (lower is better)
Translates to: STLLLRLELRCRIKA*PSSESPRGGACRSP
Trigger: TGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACATCTGAGCTCTAGCCTAAGAAGGAGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CAA 90 bp GCCCATGAAGCCTGTGTTTGCATTCCAAGCTTCAGAATCTGGGAATaGTTGGGCCAGATGGAGATGAGGACCTCTCGTAGAGGCCAGATC +
Preference number: 2 (lower is better)
Translates to: AHEACVCIPSFRIWE*LGQMEMRTSRRGQI
Trigger: GATCTGGCCTCTACGAGAGGTCCTCATCTCCATCTGGCCCAACAATTCCCAGATTCTGAAGCTTGGAATGCAAACACAGGCTTCATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGCTATTGCTAGAGTTTaGTGGGGGCCCAGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKAIARV*WGPSRG
Trigger: TCCTCTGCTGGGCCCCCAGCAAACTCTAGCAATAGC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR TCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCGAGGGTTCTCTTCTCTaGACCTCCAAAGCTCCATAT +
Preference number: 2 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLEGSLL*TSKAPY
Trigger: ATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTC...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCAGCTCTTGCTGGTTaGCAGGCTCTTATCTCAGCC +
Preference number: 2 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRPALAG*QALISA
Trigger: GGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGG...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAATGCTGCAGCAAACTaGTCAGAGGCTTTGCATAAT +
Preference number: 2 (lower is better)
Translates to: YSPALAGCQALISASPDSNAAAN*SEALHN
Trigger: ATTATGCAAAGCCTCTGACCAGTTTGCTGCAGCATT...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CAA 90 bp CATGAAGCCTGTGTTTGCATTCCAAGCTTCAGAATCTGGGAATTGTaGGGCCAGATGGAGATGAGGACCTCTCGTAGAGGCCAGATCAGA +
Preference number: 2 (lower is better)
Translates to: HEACVCIPSFRIWEL*GQMEMRTSRRGQIR
Trigger: TCTGATCTGGCCTCTACGAGAGGTCCTCATCTCCATCTGGCCCAACAATTCCCAGATTCTGAAGCTTGGAATGCAAACACAGGCTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR TCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGGAGTTCCCAAAAATaGAGAGGACCCTCTGAATCA +
Preference number: 2 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLRSSQK*RGPSES
Trigger: TGATTCAGAGGGTCCTCTTCATTTTTGGGAACTCCT...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCAAGCCTGCCCCTCTCTaGCTCCCAAAAATATGGCTT +
Preference number: 2 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAKPAPL*LPKIWL
Trigger: AAGCCATATTTTTGGGAGGCAGAGAGGGGCAGGCTT...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCAAGCCTGCCCCTCTCTaGCTCCCAAAAATATGGCTT +
Preference number: 2 (lower is better)
Translates to: WSEALHNDTAAAAIARVCKPAPL*LPKIWL
Trigger: AAGCCATATTTTTGGGAGGCAGAGAGGGGCAGGCTT...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAGTCGGATCAAAGCTTTaGCTTCATCTGAGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: DARFQPESRVLEGHPRGRVGSKL*LHLRAQ
Trigger: TTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGAC...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCATACAGCCCAGCTCTTaGTGGTTGCCAGGCTCTTAT +
Preference number: 2 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAIQPSS*WLPGSY
Trigger: ATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTAT...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CAA 90 bp CTGATTAGGGCAGATGTAAATGCTGCAGCAAACTGGTCAGAGGCTTaGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: LIRADVNAAANWSEA*HNDTAAAAIARVCW
Trigger: CCAGCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCAGTTTGCTGCAGCATTTACATCTGCCCTAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR GCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCCATGAAGCCTGTGTTTaGATTCCAAGCTTCAGAATC +
Preference number: 2 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLHEACV*IPSFRI
Trigger: GATTCTGAAGCTTGGAATGCAAACACAGGCTTCATG...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAATGTTGCCCAAGAACATaGAATCAGCCCATGATCTCC +
Preference number: 2 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKCCPRT*NQPMIS
Trigger: GGAGATCATGGGCTGATTCCATGTTCTTGGGCAACA...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR TCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGAGGAGTTCCCAAAAATaGAGAGGACCCTCTGAATCA +
Preference number: 2 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERRSSQK*RGPSES
Trigger: TGATTCAGAGGGTCCTCTTCATTTTTGGGAACTCCT...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAATGCCTCCCAAAAATATaGCTTTGGAAAGGAGTTCCC +
Preference number: 2 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKCLPKI*LWKGVP
Trigger: GGGAACTCCTTTCCAAAGCCATATTTTTGGGAGGCA...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCAAGCTTCAGAATCTaGGAATTGTTGGGCCAGATG +
Preference number: 2 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRPSFRI*ELLGQM
Trigger: CATCTGGCCCAACAATTCCCAGATTCTGAAGCTTGG...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGCCAAAAATATGGCTTTaGAAAGGAGTTCCCAAAAAT +
Preference number: 2 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRPKIWL*KGVPKN
Trigger: ATTTTTGGGAACTCCTTTCCAAAGCCATATTTTTGG...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCAATGCTGCAGCAAACTaGTCAGAGGCTTTGCATAAT +
Preference number: 2 (lower is better)
Translates to: GEVPPVSYNSQSSETSQANAAAN*SEALHN
Trigger: ATTATGCAAAGCCTCTGACCAGTTTGCTGCAGCATT...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCCCAAAAATATGGCTTTaGAAAGGAGTTCCCAAAAAT +
Preference number: 2 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLPKIWL*KGVPKN
Trigger: ATTTTTGGGAACTCCTTTCCAAAGCCATATTTTTGG...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCCAGCAGAGGACAGGGTaGCGGGGTCCATTTCCAGCA +
Preference number: 3 (lower is better)
Translates to: ALAGCQALISASPDSSPTQQRTG*RGPFPA
Trigger: TGCTGGAAATGGACCCCGCAACCCTGTCCTCTGCTG...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCTGTCGGATCAAAGCTTaGCCTTCATCTGAGAGCCCA +
Preference number: 3 (lower is better)
Translates to: ALAGCQALISASPDSSPTCRIKA*PSSESP
Trigger: TGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR TCA 72 bp CGTAGAGGCCAGATCAGAGGTGAGGGTTCTCTTCTCTaGACCTCCAAAGCTCCATATCCCAGCCAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: RRGQIRGEGSLL*TSKAPYPSQRE
Trigger: CTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCACCTCTGATCTGGCCTCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR GCA 72 bp CCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTaGCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGC +
Preference number: 3 (lower is better)
Translates to: PMISKYSPALAG*QALISASPDSS
Trigger: GCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCACCCAAAAATATGGCTTaGGAAAGGAGTTCCCAAAAA +
Preference number: 3 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAPKNMA*ERSSQK
Trigger: TTTTTGGGAACTCCTTTCCAAAGCCATATTTTTGGG...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGCAGCAGAGGACAGGGTaGCGGGGTCCATTTCCAGCA +
Preference number: 3 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERQQRTG*RGPFPA
Trigger: TGCTGGAAATGGACCCCGCAACCCTGTCCTCTGCTG...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCCGGCAGCAGCTGCTATaGCTAGAGTTTGCTGGGGGC +
Preference number: 3 (lower is better)
Translates to: GEVPPVSYNSQSSETSQARQQLL*LEFAGG
Trigger: GCCCCCAGCAAACTCTAGCAATAGCAGCTGCTGCCG...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CCA 72 bp TCAGCCCATGATCTCCAAATACAGCCCAGCTCTTGCTaGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTC +
Preference number: 3 (lower is better)
Translates to: SAHDLQIQPSSC*LPGSYLSQSRL
Trigger: GAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCTTCAGAATCTGGGAATaGTTGGGCCAGATGGAGATG +
Preference number: 3 (lower is better)
Translates to: YSPALAGCQALISASPDSFRIWE*LGQMEM
Trigger: CATCTCCATCTGGCCCAACAATTCCCAGATTCTGAA...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAACCCAGCTCTTGCTGGTaGCCAGGCTCTTATCTCAGC +
Preference number: 3 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKPSSCW*PGSYLS
Trigger: GCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGG...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAACTGGTCAGAGGCTTaGCATAATGACACGGCAGCA +
Preference number: 3 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLNWSEA*HNDTAA
Trigger: TGCTGCCGTGTCATTATGCAAAGCCTCTGACCAGTT...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGTTTCATGAAACTCCATaGCATAGTTCTCAGTGGGGG +
Preference number: 3 (lower is better)
Translates to: CRIKALPSSESPRGGACRFHETP*HSSQWG
Trigger: CCCCCACTGAGAACTATGCAATGGAGTTTCATGAAA...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGAATACAGCCCAGCTCTaGCTGGTTGCCAGGCTCTTA +
Preference number: 3 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERNTAQL*LVARLL
Trigger: TAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATT...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CCA 72 bp CCTCTGATTAGGGCAGATGTAAATGCTGCAGCAAACTaGTCAGAGGCTTTGCATAATGACACGGCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: PLIRADVNAAAN*SEALHNDTAAA
Trigger: AGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCAGTTTGCTGCAGCATTTACATCTGCCCTAATCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGCCCAAAAATATGGCTTaGGAAAGGAGTTCCCAAAAA +
Preference number: 3 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQPKNMA*ERSSQK
Trigger: TTTTTGGGAACTCCTTTCCAAAGCCATATTTTTGGG...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAATTCAGAATCTGGGAATaGTTGGGCCAGATGGAGATG +
Preference number: 3 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKFRIWE*LGQMEM
Trigger: CATCTCCATCTGGCCCAACAATTCCCAGATTCTGAA...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR TCA 72 bp TGGAAGGTCACCCAAGAGGGAGAAGAAAGGAATATGTaGAAAGGAATTGTAGGGGAGGAGGAGGAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: WKVTQEGEERNM*KGIVGEEEEEK
Trigger: CTTCTCCTCCTCCTCCTCCCCTACAATTCCTTTTCACATATTCCTTTCTTCTCCCTCTTGGGTGACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR-3UTR CAA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAATTTCATGAAACTCCATaGCATAGTTCTCAGTGGGGG +
Preference number: 3 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKFHETP*HSSQWG
Trigger: CCCCCACTGAGAACTATGCAATGGAGTTTCATGAAA...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAAGGCTGGAACGGCTCTaGGGGGCATGGCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: EHAGVQLGEWGQSQCARARLERL*GAWLLR
Trigger: GCGCAGGAGCCATGCCCCTCAGAGCCGTTCCAGCCT...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGGCCCGCCAGAGCCGCTaGCGCAGGGAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGARQSR*RRELPA
Trigger: AGCAGGCAGCTCCCTGCGGCAGCGGCTCTGGCGGGC...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGCCAGGCTGGAGTTCCTaGGGGTGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGPGWSS*GCCRPC
Trigger: GCAGGGCCGGCAGCACCCTCAGGAACTCCAGCCTGG...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAGCCTGGATGCACTCCTaGCGTGGGCAATGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAAWMHS*RGQCSR
Trigger: GCGGCTGCATTGCCCACGGCAGGAGTGCATCCAGGC...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCACTGAGGCAGTGGAGTTaGCAAGGCGGATGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: EHAGVQLGEWGQSQCARALRQWS*QGGWRG
Trigger: GCCGCGCCATCCGCCTTGCCAACTCCACTGCCTCAG...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCACCCTCAGGCAAGGCCTaGGGATGGCAGGTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAPSGKA*GWQVAA
Trigger: TGCAGCGACCTGCCATCCCCAGGCCTTGCCTGAGGG...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCAGGTGCTACGGCTGGTaGGGCCACCCGGCGAGACGG +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTRCYGW*GHPARR
Trigger: CCGTCTCGCCGGGTGGCCGCACCAGCCGTAGCACCT...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCGGATGGCGCGGCGCTTaGCCCTGCGAGGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTGWRGA*PCEGSK
Trigger: CTTGCTGCCCTCGCAGGGCCAAGCGCCGCGCCATCC...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGCCGCAGGGAGCTGCCTaGTGGCAGGGCTGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQPQGAA*WQGWAV
Trigger: GACGGCCCAGCCCTGCCAGCAGGCAGCTCCCTGCGG...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGCCAGGCTGGAGTTCCTaGGGGTGCTGCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRPGWSS*GCCRPC
Trigger: GCAGGGCCGGCAGCACCCTCAGGAACTCCAGCCTGG...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGGTGCTACGGCTGGTaGGGCCACCCGGCGAGACGG +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRRCYGW*GHPARR
Trigger: CCGTCTCGCCGGGTGGCCGCACCAGCCGTAGCACCT...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCCGCGGCGCTTGGCCCTaGGAGGGCAGCAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTRGAWP*EGSKKT
Trigger: TGTCTTCTTGCTGCCCTCGCAGGGCCAAGCGCCGCG...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCGAGGGGCATGGCTCCTaGGCAGCCCTGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTEGHGS*AALPAC
Trigger: ACATGCTGGCAGGGCTGCGCAGGAGCCATGCCCCTC...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCCAGAGGTGCTACGGCTaGTGCGGCCACCCGGCGAGA +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSQRCYG*CGHPAR
Trigger: TCTCGCCGGGTGGCCGCACCAGCCGTAGCACCTCTG...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGTTGGCAAGGCGGATaGCGCGGCGCTTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSSWQGG*RGAWPC
Trigger: GCAGGGCCAAGCGCCGCGCCATCCGCCTTGCCAACT...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAGGGACCAGAGGTGCTTaGAAGAGACTGAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAGTRGA*KRLRVP
Trigger: AGGCACTCTCAGTCTCTTTCAAGCACCTCTGGTCCC...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCACAGGGCTGCTCCCTTaGGGACCTGCGTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSTGLLP*GPACRA
Trigger: GGCTCTGCACGCAGGTCCTCAAGGGAGCAGCCCTGT...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGCATGGGGCTTGGCATTaGGGCTGGAACGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGHGAWH*GWNGSE
Trigger: CTCAGAGCCGTTCCAGCCTCAATGCCAAGCCCCATG...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGGGGCCGTCCCCGGCCTaGTCTGCCTCCTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQGPSPA*SASSSS
Trigger: AGAGGATGAGGAGGCAGAGCAGGCCGGGGACGGCCC...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCGAGGGGCATGGCTCCTaGGCAGCCCTGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSEGHGS*AALPAC
Trigger: ACATGCTGGCAGGGCTGCGCAGGAGCCATGCCCCTC...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAAGGGCCTTGGGGACATaGAGAAGAGCAGAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: EHAGVQLGEWGQSQCARARALGT*RRAEKG
Trigger: CCCCTTTTCTGCTCTTCTCCATGTCCCCAAGGCCCT...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGAGGATGGTGGGGGCTTaGAGACACCTTGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGRMVGA*RHLEPP
Trigger: GGGTGGCTCAAGGTGTCTCCAAGCCCCCACCATCCT...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGCCGGGTCCCACTGGCTaGGAAGACACAGAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGPGPTG*EDTEVL
Trigger: TAGCACCTCTGTGTCTTCCCAGCCAGTGGGACCCGG...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCCCCTCAGGCAAGGCCTaGGGATGGCAGGTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSPSGKA*GWQVAA
Trigger: TGCAGCGACCTGCCATCCCCAGGCCTTGCCTGAGGG...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGGCTGGAACGGCTCTaGGGGGCATGGCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLRLERL*GAWLLR
Trigger: GCGCAGGAGCCATGCCCCTCAGAGCCGTTCCAGCCT...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCCTCATCTCCTCGAGATaGCTTCACCCCCGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSLISSR*LHPRCR
Trigger: CCGGCACCGGGGGTGAAGGCATCTCGAGGAGATGAG...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGAGCAGAGGACAGGGTTaGGGGGTCCATTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGSRGQG*GVHFQQ
Trigger: CTGCTGGAAATGGACCCCGCAACCCTGTCCTCTGCT...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCCAACAGCGGTGGGGCTaGGGGTACCAAACACCCGAG +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSQQRWG*GYQTPE
Trigger: CTCGGGTGTTTGGTACCCCCAGCCCCACCGCTGTTG...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCGGCTTTGCAGGAAGCTaGCAGGAGACGCCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTGFAGS*QETPGE
Trigger: TTCTCCCGGCGTCTCCTGCCAGCTTCCTGCAAAGCC...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAGGGCCAAGAAACACGTaGGGAATTCTCTGCACTCTC +
Preference number: 4 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAGPRNT*GILCTL
Trigger: GAGAGTGCAGAGAATTCCCCACGTGTTTCTTGGCCC...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGTGGCCAAGTGAGAAATaGGCCTGGCCCTCAACCCCT +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGWPSEK*AWPSTP
Trigger: AGGGGTTGAGGGCCAGGCCCATTTCTCACTTGGCCA...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR TCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGGCTGCCACGGCTGACTaGGGCAGTGGAGTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQAATAD*GSGVGK
Trigger: CTTGCCAACTCCACTGCCTCAGTCAGCCGTGGCAGC...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGGCATGCTGCCACGGCTaGCTGAGGCAGTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRACCHG*LRQWSW
Trigger: CCAACTCCACTGCCTCAGTCAGCCGTGGCAGCATGC...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGCACCTGTGTCCCCGCTaGAGGAGCAGCAACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQHLCPR*RSSNSG
Trigger: ACCGCTGTTGCTGCTCCTGCAGCGGGGACACAGGTG...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAACCACGTGGCCAGGCCTaGCGCCATCGTGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKPRGQA*RHRATP
Trigger: GGGAGTGGCACGATGGCGGCAGGCCTGGCCACGTGG...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGGGGTGCCCAAGCCTaGCCCTCTCTGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRRGAQA*PSLPPK
Trigger: TTTGGGAGGCAGAGAGGGGCAGGCTTGGGCACCCCT...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAGAGAAACACAGCCTCTaGAGTCTTCAGCCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAEKHSL*SLQPLS
Trigger: GCTTAGAGGCTGAAGACTGCAGAGGCTGTGTTTCTC...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGTATCTGAGTGTGTGTTaGGAGAGGCAGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGYLSVC*ERQPDP
Trigger: GGGGTCAGGCTGCCTCTCCCAACACACACTCAGATA...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGCCATTGCTGGCTCTGTaGTGTGTCATCTCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGPLLAL*CVISER
Trigger: ACGCTCTGAGATGACACATCACAGAGCCAGCAATGG...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTGGGCAGCCAGCCCACTaGTGCTGCCCGAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSGQPAH*CCPSKR
Trigger: CCTTTTGCTCGGGCAGCAGCAGTGGGCTGGCTGCCC...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGGTAGAAAACGAGGGCTaGGGTGCTCGTGTGTGGATT +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGVENEG*GARVWI
Trigger: AATCCACACACGAGCACCGCAGCCCTCGTTTTCTAC...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCGGGAAGACACAGAGGTaGTACGGCTGGTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLGKTQR*YGWCGH
Trigger: GTGGCCGCACCAGCCGTAGCACCTCTGTGTCTTCCC...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAGCTCCTGCGCAGCCCTaGCAGCATGTCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRAPAQP*QHVQLL
Trigger: CAGGAGCTGGACATGCTGGCAGGGCTGCGCAGGAGC...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTCGTTGGGGGCAGGTCTaGGGAAACCACACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSRWGQV*GNHTPR
Trigger: CCTCGGGGTGTGGTTTCCCCAGACCTGCCCCCAACG...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCACGCCGGGAGAAGGCTaGGTCCCACCGTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCTPGEG*VPPLGA
Trigger: TGCCCCCAACGGTGGGACCCAGCCTTCTCCCGGCGT...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGCCGCGGCATGGGATaGTCTCCACCACATTGGCGA +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRSRGMG*SPPHWR
Trigger: TCGCCAATGTGGTGGAGACCATCCCATGCCGCGGCT...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCCAGAGGTGCTACGGCTaGTGCGGCCACCCGGCGAGA +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCQRCYG*CGHPAR
Trigger: TCTCGCCGGGTGGCCGCACCAGCCGTAGCACCTCTG...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGGCTTCCGGGTCCCACTaGCTGGGAAGACACAGAGGT +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQASGSH*LGRHRG
Trigger: ACCTCTGTGTCTTCCCAGCCAGTGGGACCCGGAAGC...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGGGATGGCGCGGCGCTTaGCCCTGCGAGGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRGWRGA*PCEGSK
Trigger: CTTGCTGCCCTCGCAGGGCCAAGCGCCGCGCCATCC...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCACAGGGATGAGATCTTaGCAGTCTCGGGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSTGMRS*QSRGRG
Trigger: GCCTCTTCCCCGAGACTGTCAAGATCTCATCCCTGT...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCTACCCCTCACAGGGATaGGATCTTGACAGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSYPSQG*DLDSLG
Trigger: CCCGAGACTGTCAAGATCTCATCCCTGTGAGGGGTA...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGAGCCTGGAATTCCTTTaGAGTGGTGGAGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGSLEFL*SGGEET
Trigger: AGTCTCCTCTCCACCACTGCAAAGGAATTCCAGGCT...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTCCCCGGCCTGCTCTaGCTCCTCATCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKVPGLL*LLILCQ
Trigger: CTGGCAGAGGATGAGGAGGCAGAGCAGGCCGGGGAC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGGCTCCCTTGAGGACCTaGGTGCAGAGCCGCGGCATG +
Preference number: 4 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERAPLRT*VQSRGM
Trigger: CATGCCGCGGCTCTGCACGCAGGTCCTCAAGGGAGC...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTCGTTCGCCACAGGGCTaGTCCCTTGAGGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSRSPQG*SLEDLR
Trigger: ACGCAGGTCCTCAAGGGAGCAGCCCTGTGGCGAACG...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCCACAGGCTGTGTCCATaGAGAAAAAGGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTHRLCP*RKRPVG
Trigger: TCCCACAGGCCTTTTTCTGCATGGACACAGCCTGTG...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGGCGCACCTTCTGCTGTaGTCGGCGCTTGTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERAHLLL*SALVSP
Trigger: CGGGCTGACAAGCGCCGAGCACAGCAGAAGGTGCGC...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTGGGAAGACACAGAGGTaGTACGGCTGGTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSGKTQR*YGWCGH
Trigger: GTGGCCGCACCAGCCGTAGCACCTCTGTGTCTTCCC...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAACGCGGCGCTTGGCCCTaGGAGGGCAGCAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKRGAWP*EGSKKT
Trigger: TGTCTTCTTGCTGCCCTCGCAGGGCCAAGCGCCGCG...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCGCTCCTGCGCAGCCCTaGCAGCATGTCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCAPAQP*QHVQLL
Trigger: CAGGAGCTGGACATGCTGGCAGGGCTGCGCAGGAGC...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGGGCAGATGTAAATGCTaGAGCAAACTGGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGGRCKC*SKLVRG
Trigger: GCCTCTGACCAGTTTGCTGCAGCATTTACATCTGCC...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGATACAGCCCAGCTCTTaGTGGTTGCCAGGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGIQPSS*WLPGSY
Trigger: ATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTAT...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCGAGCAGCAACAGCGGTaGGGCTGGGGGTACCAAACA +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLEQQQR*GWGYQT
Trigger: TGTTTGGTACCCCCAGCCCCACCGCTGTTGCTGCTC...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAACACACCCCGAGGGGCTaGCGGTGTGTACTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKHTPRG*RCVLGS
Trigger: ACTGCCCAGTACACACCGCCAGCCCCTCGGGGTGTG...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGCTGGGTCCCACCGTTaGGGGCAGGTCTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKAGSHR*GQVWGN
Trigger: GTTTCCCCAGACCTGCCCCCAACGGTGGGACCCAGC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGAGGCTGAGAGTTATCTaGGGGAGGTGGGTATCTAGA +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGRLRVI*GRWVSR
Trigger: TCTAGATACCCACCTCCCCCAGATAACTCTCAGCCT...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAAAGGGGTGTGGGGATaGGGCCAAGAAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRKGVWG*GQEGAE
Trigger: CTCAGCTCCTTCTTGGCCCCATCCCCACACCCCTTT...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCCCCAAACAAGGAAACTaGGGGTGTCTAGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTPKQGN*GCLERP
Trigger: TGGCCTCTCTAGACACCCCCAGTTTCCTTGTTTGGG...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGATGCACTCCTGCCGTaGGCAATGCAGCCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKDALLP*AMQPPR
Trigger: ACGGGGCGGCTGCATTGCCCACGGCAGGAGTGCATC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCTCTTCGTCGAAGGCCTaGATGCACTCCTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLSSSKA*MHSCRG
Trigger: CCCACGGCAGGAGTGCATCCAGGCCTTCGACGAAGA...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGTGCAGAGCCGCGGCATaGGATGGTCTCCACCACATT +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRCRAAA*DGLHHI
Trigger: AATGTGGTGGAGACCATCCCATGCCGCGGCTCTGCA...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGGCAGAAAAAGGCCTGTaGGAAGCGTTCGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRAEKGL*EAFATG
Trigger: CCCTGTGGCGAACGCTTCCCACAGGCCTTTTTCTGC...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAACTGAGGCAGTGGAGTTaGCAAGGCGGATGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKLRQWS*QGGWRG
Trigger: GCCGCGCCATCCGCCTTGCCAACTCCACTGCCTCAG...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAGAGGCCAGGGGCCTGTaGAAGCCCAGTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGREARGL*KPSASA
Trigger: AGCTGAAGCACTGGGCTTCCACAGGCCCCTGGCCTC...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTGAGGCCAGGGGCCTGTaGAAGCCCAGTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSEARGL*KPSASA
Trigger: AGCTGAAGCACTGGGCTTCCACAGGCCCCTGGCCTC...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCGCTGCCACGGCTGACTaGGGCAGTGGAGTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAAATAD*GSGVGK
Trigger: CTTGCCAACTCCACTGCCTCAGTCAGCCGTGGCAGC...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCGCATGCTGCCACGGCTaGCTGAGGCAGTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAACCHG*LRQWSW
Trigger: CCAACTCCACTGCCTCAGTCAGCCGTGGCAGCATGC...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTCATGGGGCTTGGCATTaGGGCTGGAACGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSHGAWH*GWNGSE
Trigger: CTCAGAGCCGTTCCAGCCTCAATGCCAAGCCCCATG...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGACAGGGATGAGATCTTaGCAGTCTCGGGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRTGMRS*QSRGRG
Trigger: GCCTCTTCCCCGAGACTGTCAAGATCTCATCCCTGT...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCAGGCCGGAGCCCCTaGTGCTTCTGGACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRPGRSP*CFWTVA
Trigger: GGCAACAGTCCAGAAGCATCAGGGGCTCCGGCCTGG...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGATCCGGACTAGCTCTGTaGCCCTGGCCAGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRSGLAL*PWPGTQ
Trigger: TTGAGTGCCTGGCCAGGGTCACAGAGCTAGTCCGGA...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCCCAGCCCACTGCTGCTaGCCGAGCAAAAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAPAHCC*PSKRQP
Trigger: TGGCTGCCTTTTGCTCGGGCAGCAGCAGTGGGCTGG...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCCAGCCAGCCCACTGCTaGTGCCCGAGCAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAQPAHC*CPSKRQ
Trigger: CTGCCTTTTGCTCGGGCAGCAGCAGTGGGCTGGCTG...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGTGCCAATCGGATCCTTaGCAAGCGCACCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQCQSDP*QAHLLL
Trigger: CAGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCA...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCAAGCCTGCCCCTCTCTaGCTCCCAAAAATATGGCTT +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTKPAPL*LPKIWL
Trigger: AAGCCATATTTTTGGGAGGCAGAGAGGGGCAGGCTT...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGAGGGGTGCCCAAGCCTaGCCCTCTCTGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERRGAQA*PSLPPK
Trigger: TTTGGGAGGCAGAGAGGGGCAGGCTTGGGCACCCCT...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGGTCGGATCAAAGCTTTaGCTTCATCTGAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGVGSKL*LHLRAQ
Trigger: TTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGAC...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCAGAGGACAGGGTTaGGGGGTCCATTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLSRGQG*GVHFQQ
Trigger: CTGCTGGAAATGGACCCCGCAACCCTGTCCTCTGCT...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGGGACTATCCCAGGATaGGTTAGGGCGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKGTIPG*VRAWGL
Trigger: CAGCCCCCACGCCCTAACCCATCCTGGGATAGTCCC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTCCAGTGGGACCCCTaGGGACTATCCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKVQWDP*GLSQDG
Trigger: CCCATCCTGGGATAGTCCCCAGGGGTCCCACTGGAC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGGTGCATCTTGAGGGGTaGCTGTGGATCCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRVHLEG*LWIQEV
Trigger: AACCTCCTGGATCCACAGCCACCCCTCAAGATGCAC...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGTGCCTGAGAGGTGTCTaGGGGCGTCTAGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERCLRGV*GRLEGP
Trigger: TGGCCCCTCTAGACGCCCCCAGACACCTCTCAGGCA...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCGCAGGAAGGCATTGGTaGTACCACTCTTTGCCAATC +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTAGRHW*YHSLPI
Trigger: GATTGGCAAAGAGTGGTACCACCAATGCCTTCCTGC...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGTCAAGGCTGTCATaGGGCTTGGCATTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRRSRLS*GLALRL
Trigger: CAGCCTCAATGCCAAGCCCCATGACAGCCTTGACCT...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTGAGAAATGGGCCTaGCCCTCAACCCCTACCATC +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRSEKWA*PSTPTI
Trigger: GATGGTAGGGGTTGAGGGCCAGGCCCATTTCTCACT...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376477.5
3UTR CAA 72 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTaGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCW*PGSYLSQSRLQ
Trigger: CTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGGGCTTGGAGACACCTTaGGCCACCCAAACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRGLETP*ATQTRK
Trigger: TTTCCTTGTTTGGGTGGCTCAAGGTGTCTCCAAGCC...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAGGAACACACGCAGGGTaGCAAAGGCGCCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRGTHAG*QRRQRH
Trigger: ATGTCTCTGGCGCCTTTGTCACCCTGCGTGTGTTCC...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGCAAGACGCCACTGAGTaGGCAGATGGACCCGAAAAT +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQQDATE*ADGPEN
Trigger: ATTTTCGGGTCCATCTGCTCACTCAGTGGCGTCTTG...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGCAGAACGGTTCCTaGCACAAAGAGCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRRQNGS*HKEPVP
Trigger: AGGAACAGGCTCTTTGTGTCAGGAACCGTTCTGCCT...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGGCCAGATCAGAGGTaGGGGTTCTCTTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRRPDQR*GFSSLN
Trigger: GTTCAGAGAAGAGAACCCTCACCTCTGATCTGGCCT...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCTGCCAGATTTCAGCCTaGGAGCAGAGTTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSCQISA*EQSFGR
Trigger: CCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCA...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAGCGTGTCCTCAACTGTaGGACATGGGCAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRACPQL*DMGSHP
Trigger: TGGATGGCTGCCCATGTCTCACAGTTGAGGACACGC...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR TCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCGGCACTCAAACCTTCTaGGTCCCTCAGTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSGTQTF*VPQFLA
Trigger: AGCAAGAAACTGAGGGACTCAGAAGGTTTGAGTGCC...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGCCCCCTCTGCAGAGCTaGCTGAGTTCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERPPLQS*LSSPPP
Trigger: AGGAGGAGGAGAACTCAGGCAGCTCTGCAGAGGGGG...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAAAGGAGTCAGCCTGTaGCTGAGAGGTGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRKGVSL*LRGVWG
Trigger: CCCCCAGACACCTCTCAGGCACAGGCTGACTCCTTT...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCCGTCGAAGGCCTGGATaGACTCCTGCCGTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQARRRPG*TPAVGN
Trigger: ATTGCCCACGGCAGGAGTGCATCCAGGCCTTCGACG...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAATGCCTCCTCATCCTCTaGCAGGCGCTCGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKCLLIL*QALGIL
Trigger: GAGAATGCCGAGCGCCTGGCAGAGGATGAGGAGGCA...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGTGGACCCGAAAATCTTaGCAGCAATGGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRWTRKS*QQWCWA
Trigger: TGCCCAGCACCATTGCTGGCAAGATTTTCGGGTCCA...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGTCAAGGCCCCCATTCTaGTTGTACTGCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRSRPPF*LYCRKA
Trigger: TGCCTTCCTGCAGTACAAGCAGAATGGGGGCCTTGA...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGCATGTCCAGCTCCTaGATGCTGCCACGGCTGACT +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRSMSSS*MLPRLT
Trigger: AGTCAGCCGTGGCAGCATGCAGGAGCTGGACATGCT...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCCCAGCTCTTGCTGGTTaGCAGGCTCTTATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLPALAG*QALISA
Trigger: GGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGG...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGACCCCTACCATCTGCTaGCCCTGTCCAAGCTACATA +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQTPTIC*PCPSYI
Trigger: TATGTAGCTTGGACAGGGGCAGCAGATGGTAGGGGT...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR CCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCGTGTTGAAAGGGAGTTaGGTGTGTCTCCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLVLKGS*VCLQGG
Trigger: CCCTCCCTGGAGACACACCCAACTCCCTTTCAACAC...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCGAGGAAAAAGGGGCCTaGGGAATTCCAAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCEEKGA*GIPRAG
Trigger: CCCGGCCCTTGGAATTCCCCAGGCCCCTTTTTCCTC...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCCCGGGTCCCACTGGCTaGGAAGACACAGAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAPGPTG*EDTEVL
Trigger: TAGCACCTCTGTGTCTTCCCAGCCAGTGGGACCCGG...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGTGCCTCCCAAAAATATaGCTTTGGAAAGGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGCLPKI*LWKGVP
Trigger: GGGAACTCCTTTCCAAAGCCATATTTTTGGGAGGCA...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGCCTGGGCAATGTTCTaGGGGACTGAGAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKAWAMF*GTEKGL
Trigger: AAGGCCCTTCTCAGTCCCTCAGAACATTGCCCAGGC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGTGCCTGGAGAACTTaGAGATGCGAAACACCCGGA +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLSAWRT*RCETPG
Trigger: TCCGGGTGTTTCGCATCTTCAAGTTCTCCAGGCACT...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCCAAGACGCCACTGAGTaGGCAGATGGACCCGAAAAT +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLQDATE*ADGPEN
Trigger: ATTTTCGGGTCCATCTGCTCACTCAGTGGCGTCTTG...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAATGAAGAGGACCCTCTaGATCAGCAGGCCTACCCCT +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRMKRTL*ISRPTP
Trigger: AGGGGTAGGCCTGCTGATTCAGAGGGTCCTCTTCAT...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGGCCAGATCAGAGGTaGGGGTTCTCTTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLRPDQR*GFSSLN
Trigger: GTTCAGAGAAGAGAACCCTCACCTCTGATCTGGCCT...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGTGCCAGATTTCAGCCTaGGAGCAGAGTTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRCQISA*EQSFGR
Trigger: CCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCA...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCATTTGTTTGTCAGTCTaGTCCTGGACCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSICLSV*SWTSNQ
Trigger: CTGGTTGGAGGTCCAGGATCAGACTGACAAACAAAT...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTTGGAAAGGGAGCTGGTaGATCTTGAGGGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSWKGSW*ILRGGC
Trigger: ACAGCCACCCCTCAAGATGCACCAGCTCCCTTTCCA...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGATGCCAATCGGATCCTTaGCAAGCGCACCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRCQSDP*QAHLLL
Trigger: CAGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCA...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGGGTGGTACCACTCTTTaGCAATCGGATCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQGGTTL*QSDPCQ
Trigger: TTGGCAAGGATCCGATTGGCAAAGAGTGGTACCACC...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCAGCATGTCCAGCTCCTaGATGCTGCCACGGCTGACT +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQASMSSS*MLPRLT
Trigger: AGTCAGCCGTGGCAGCATGCAGGAGCTGGACATGCT...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAGCTATTGCTAGAGTTTaGTGGGGGCCCAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRAIARV*WGPSRG
Trigger: TCCTCTGCTGGGCCCCCAGCAAACTCTAGCAATAGC...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTGCTATTGCTAGAGTTTaGTGGGGGCCCAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSAIARV*WGPSRG
Trigger: TCCTCTGCTGGGCCCCCAGCAAACTCTAGCAATAGC...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGACTGGTCAGAGGCTTTaGATAATGACACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRTGQRL*IMTRQQ
Trigger: CTGCTGCCGTGTCATTATGCAAAGCCTCTGACCAGT...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATAAGGGTGCGGGGTCCCTaGAAGGAGGCCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCIRVRGP*KEAWEG
Trigger: CCCTTCCCAGGCCTCCTTCCAGGGACCCCGCACCCT...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGGCTGGCGGTGTGTACTaGGCAGTGGCAGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRAGGVY*AVAVAA
Trigger: TGCTGCTACTGCCACTGCCCAGTACACACCGCCAGC...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAATCTGGAAAGGGAGCTaGTGCATCTTGAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRIWKGS*CILRGG
Trigger: GCCACCCCTCAAGATGCACCAGCTCCCTTTCCAGAT...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCCTGTCTCCAGGATGGTaGGGGCTTGGAGACACCTTG +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQALSPGW*GLGDTL
Trigger: CAAGGTGTCTCCAAGCCCCCACCATCCTGGAGACAG...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCGCCCAGCAAGGTGTCTaGGTAGCGGTCCAGCGTATT +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCAQQGV*VAVQRI
Trigger: AATACGCTGGACCGCTACCCAGACACCTTGCTGGGC...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATAAGTTGGCAAGGCGGATaGCGCGGCGCTTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCISWQGG*RGAWPC
Trigger: GCAGGGCCAAGCGCCGCGCCATCCGCCTTGCCAACT...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTTATCTGAGTGTGTGTTaGGAGAGGCAGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSYLSVC*ERQPDP
Trigger: GGGGTCAGGCTGCCTCTCCCAACACACACTCAGATA...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCTGTTGCCCAAGAACATaGAATCAGCCCATGATCTCC +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSCCPRT*NQPMIS
Trigger: GGAGATCATGGGCTGATTCCATGTTCTTGGGCAACA...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGGTGAACACAGCCTCCTaGGGAGAGAGTCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRVNTAS*GESPST
Trigger: GGTGCTGGGACTCTCTCCCCAGGAGGCTGTGTTCAC...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
3UTR CAA 72 bp CTTCTTAGGCTAGAGCTCAGATGTCGGATCAAAGCTTaGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGC +
Preference number: 4 (lower is better)
Translates to: LLRLELRCRIKA*PSSESPRGGAC
Trigger: GCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACATCTGAGCTCTAGCCTAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGGAAGAAGTACTCGCCTaGGTCAGCATCGTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGREEVLA*VSIVEE
Trigger: TTCTTCTACGATGCTGACTCAGGCGAGTACTTCTTC...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCATGAAGAGGACCCTCTaGATCAGCAGGCCTACCCCT +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCMKRTL*ISRPTP
Trigger: AGGGGTAGGCCTGCTGATTCAGAGGGTCCTCTTCAT...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGGAGGGTTCTCTTCTCTaGACCTCCAAAGCTCCATAT +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGREGSLL*TSKAPY
Trigger: ATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTC...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGAGAATTTGTGCTATCTaGGTGTGTGTTGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQRICAI*VCVGRG
Trigger: GCCTCTCCCAACACACACTCAGATAGCACAAATTCT...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATACCAGGCCGGAGCCCCTaGTGCTTCTGGACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCIPGRSP*CFWTVA
Trigger: GGCAACAGTCCAGAAGCATCAGGGGCTCCGGCCTGG...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAAGGTGTCTTGGGACTaGCTAGAGTTGCCAAGAATA +
Preference number: 4 (lower is better)
Translates to: YSPALAGCQALISASPDSKVSWD*LELPRI
Trigger: TATTCTTGGCAACTCTAGGCAGTCCCAAGACACCTT...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGAAACGAGGGCTGCGGTaGTCGTGTGTGGATTCTCGA +
Preference number: 4 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERKRGLR*SCVDSR
Trigger: TCGAGAATCCACACACGAGCACCGCAGCCCTCGTTT...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGATGGACCCGAAAATCTTaGCAGCAATGGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRWTRKS*QQWCWA
Trigger: TGCCCAGCACCATTGCTGGCAAGATTTTCGGGTCCA...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATAGCGCACCTTCTGCTGTaGTCGGCGCTTGTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCIAHLLL*SALVSP
Trigger: CGGGCTGACAAGCGCCGAGCACAGCAGAAGGTGCGC...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGCCATTCTGCTTGTACTaGAGGAAGGCATTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRPFCLY*RKALVV
Trigger: TACCACCAATGCCTTCCTGCAGTACAAGCAGAATGG...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGATCAAGGCCCCCATTCTaGTTGTACTGCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRSRPPF*LYCRKA
Trigger: TGCCTTCCTGCAGTACAAGCAGAATGGGGGCCTTGA...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCCATGAAGCCTGTGTTTaGATTCCAAGCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTHEACV*IPSFRI
Trigger: GATTCTGAAGCTTGGAATGCAAACACAGGCTTCATG...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCCCAGCTCTTGCTGGTTaGCAGGCTCTTATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCPALAG*QALISA
Trigger: GGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGG...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCGTTATCTGGGGGAGGTaGGTATCTAGACGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCVIWGR*VSRRAN
Trigger: GTTGGCCCGTCTAGATACCCACCTCCCCCAGATAAC...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGGGAATTCCTTTGCAGTaGTGGAGAGGAGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERGIPLQ*WRGDWG
Trigger: GCCCCAGTCTCCTCTCCACCACTGCAAAGGAATTCC...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGAGACATCGTCGTTCTTaGGCACCAAAAGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQRHRRS*APKAQC
Trigger: ACATTGGGCTTTTGGTGCCCAAGAACGACGATGTCT...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCAATGCTGCAGCAAACTaGTCAGAGGCTTTGCATAAT +
Preference number: 4 (lower is better)
Translates to: ALAGCQALISASPDSSPTNAAAN*SEALHN
Trigger: ATTATGCAAAGCCTCTGACCAGTTTGCTGCAGCATT...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGCACCCAGGGGATCTATaGAGACTAAATAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRHPGDL*RLNKRK
Trigger: CTTCCTCTTATTTAGTCTTCATAGATCCCCTGGGTG...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGTACCCCTCACAGGGATaGGATCTTGACAGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRYPSQG*DLDSLG
Trigger: CCCGAGACTGTCAAGATCTCATCCCTGTGAGGGGTA...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCTGGGGACAGGGAACCTaGGATGATGCCAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCWGQGT*DDARFQ
Trigger: CTGAAATCTGGCATCATCTCAGGTTCCCTGTCCCCA...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAATGGGGACAGGGAACCTaGGATGATGCCAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKWGQGT*DDARFQ
Trigger: CTGAAATCTGGCATCATCTCAGGTTCCCTGTCCCCA...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGTCCTTCAACAGATACTaGGCACCAACTGTATACCCA +
Preference number: 4 (lower is better)
Translates to: CRIKALPSSESPRGGACRSFNRY*APTVYP
Trigger: TGGGTATACAGTTGGTGCTCAGTATCTGTTGAAGGA...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTAAGCCTGCCCCTCTCTaGCTCCCAAAAATATGGCTT +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSKPAPL*LPKIWL
Trigger: AAGCCATATTTTTGGGAGGCAGAGAGGGGCAGGCTT...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAATTCCTTTGCAGTGGTaGAGAGGAGACTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKIPLQW*RGDWGI
Trigger: GATGCCCCAGTCTCCTCTCCACCACTGCAAAGGAAT...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCGCGTTTAGGAGAATGTaGCTGTCTCCAGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCAFRRM*LSPGWW
Trigger: CCACCATCCTGGAGACAGCCACATTCTCCTAAACGC...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGAGGTCAAGGCTGTCATaGGGCTTGGCATTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRRSRLS*GLALRL
Trigger: CAGCCTCAATGCCAAGCCCCATGACAGCCTTGACCT...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGTGCCTCCCAAAAATATaGCTTTGGAAAGGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRCLPKI*LWKGVP
Trigger: GGGAACTCCTTTCCAAAGCCATATTTTTGGGAGGCA...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCCCAAGCTTCAGAATCTaGGAATTGTTGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLPSFRI*ELLGQM
Trigger: CATCTGGCCCAACAATTCCCAGATTCTGAAGCTTGG...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCTGTTGCCCAAGAACATaGAATCAGCCCATGATCTCC +
Preference number: 4 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLCCPRT*NQPMIS
Trigger: GGAGATCATGGGCTGATTCCATGTTCTTGGGCAACA...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATAGGAGCTGGTGCATCTTaGGGGGTGGCTGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCIGAGAS*GVAVDP
Trigger: TGGATCCACAGCCACCCCTCAAGATGCACCAGCTCC...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR TCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATATGGGCCAGATGGAGATaGGGACCTCTCGTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCIWARWR*GPLVEA
Trigger: GGCCTCTACGAGAGGTCCTCATCTCCATCTGGCCCA...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTAGAATTTGTGCTATCTaGGTGTGTGTTGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSRICAI*VCVGRG
Trigger: GCCTCTCCCAACACACACTCAGATAGCACAAATTCT...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCGGTGGTACCACTCTTTaGCAATCGGATCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAGGTTL*QSDPCQ
Trigger: TTGGCAAGGATCCGATTGGCAAAGAGTGGTACCACC...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTCCATTCTGCTTGTACTaGAGGAAGGCATTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSPFCLY*RKALVV
Trigger: TACCACCAATGCCTTCCTGCAGTACAAGCAGAATGG...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGGCAGATGTAAATGCTaGAGCAAACTGGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKGRCKC*SKLVRG
Trigger: GCCTCTGACCAGTTTGCTGCAGCATTTACATCTGCC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTGAAGAACTAAAGAGATaGGAAGGAGTCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSEELKR*EGVWGT
Trigger: TGTCCCCCAGACTCCTTCCCATCTCTTTAGTTCTTC...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATATGGCTGTCTCCAGGATaGTGGGGGCTTGGAGACACC +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCIWLSPG*WGLGDT
Trigger: GGTGTCTCCAAGCCCCCACCATCCTGGAGACAGCCA...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGCAGGAAGGCATTGGTaGTACCACTCTTTGCCAATC +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKAGRHW*YHSLPI
Trigger: GATTGGCAAAGAGTGGTACCACCAATGCCTTCCTGC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCACTGCAGGAAGGCATTaGTGGTACCACTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCTAGRH*WYHSLP
Trigger: TGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGT...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTCCAAGCTTCAGAATCTaGGAATTGTTGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSPSFRI*ELLGQM
Trigger: CATCTGGCCCAACAATTCCCAGATTCTGAAGCTTGG...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGAATGCTGCAGCAAACTaGTCAGAGGCTTTGCATAAT +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQNAAAN*SEALHN
Trigger: ATTATGCAAAGCCTCTGACCAGTTTGCTGCAGCATT...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGACCTCCAACCAGAATTaGGGTTTCTACGCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRTSNQN*GFYALE
Trigger: TTCTAAAGCGTAGAAACCCCAATTCTGGTTGGAGGT...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGGCTGTGCCCTAGGATaGCTGTTCCTTATTTCGGTA +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKGCALG*LFLISV
Trigger: TACCGAAATAAGGAACAGCCATCCTAGGGCACAGCC...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
3UTR CAA 72 bp TGTGTTTGCATTCCAAGCTTCAGAATCTGGGAATTGTaGGGCCAGATGGAGATGAGGACCTCTCGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: CVCIPSFRIWEL*GQMEMRTSRRG
Trigger: GCCTCTACGAGAGGTCCTCATCTCCATCTGGCCCAACAATTCCCAGATTCTGAAGCTTGGAATGCAAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
3UTR CAA 72 bp GCCTGTGTTTGCATTCCAAGCTTCAGAATCTGGGAATaGTTGGGCCAGATGGAGATGAGGACCTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: ACVCIPSFRIWE*LGQMEMRTSRR
Trigger: TCTACGAGAGGTCCTCATCTCCATCTGGCCCAACAATTCCCAGATTCTGAAGCTTGGAATGCAAACACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR GCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCGTCGGATCAAAGCTTTaGCTTCATCTGAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCVGSKL*LHLRAQ
Trigger: TTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGAC...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAACAAATGTTAGGAAGTTaGGCACAATCCCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKQMLGS*AQSQST
Trigger: GGTGCTCTGGGATTGTGCCCAACTTCCTAACATTTG...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGGAAGGCAGAAGAGCCTaGAATTCCTTTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: EEKFLLSPITPKVQKHPREGRRA*NSFAVV
Trigger: CACCACTGCAAAGGAATTCCAGGCTCTTCTGCCTTC...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAAGATGGGAAGGAGTCTaGGGGACATTTACAGAACCT +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKRWEGV*GTFTEP
Trigger: AGGTTCTGTAAATGTCCCCCAGACTCCTTCCCATCT...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CCA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGCCTAGACAGTATCTTTaGAAAGCTCATGAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQPRQYL*KAHEFD
Trigger: ATCGAACTCATGAGCTTTCCAAAGATACTGTCTAGG...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR CCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCCAACTTGGCCATTGCTaGCTCTGTGATGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCQLGHC*LCDVSS
Trigger: AGATGACACATCACAGAGCCAGCAATGGCCAAGTTG...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
3UTR CAA 72 bp GCAGATGTAAATGCTGCAGCAAACTGGTCAGAGGCTTaGCATAATGACACGGCAGCAGCTGCTATTGCTAGA +
Preference number: 4 (lower is better)
Translates to: ADVNAAANWSEA*HNDTAAAAIAR
Trigger: TCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCAGTTTGCTGCAGCATTTACATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCAGGAGTTCCCAAAAATaGAGAGGACCCTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: GEVPPVSYNSQSSETSQARSSQK*RGPSES
Trigger: TGATTCAGAGGGTCCTCTTCATTTTTGGGAACTCCT...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCAAAACTGTCCACATATaGCAAAACAGGGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: WSEALHNDTAAAAIARVCKTVHI*QNREEP
Trigger: AGGCTCCTCCCTGTTTTGTCATATGTGGACAGTTTT...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAAAATGGGACCAGAGGTaGTTGAAAGAGACTGAGAGT +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKKWDQR*LKETES
Trigger: ACTCTCAGTCTCTTTCAAGCACCTCTGGTCCCATTT...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATAGCCTTGAAACCCTCCTaGCTTTCTCCATGCCACCCA +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCIALKPS*LSPCHP
Trigger: TGGGTGGCATGGAGAAAGGCAGGAGGGTTTCAAGGC...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAATTTGTTGGTTTTGGCTaGCTCTGTCTTACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKFVGFG*LCLTCS
Trigger: AGAGCAGGTAAGACAGAGGCAGCCAAAACCAACAAA...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATATCAACCCCTACCATCTaGTGCCCCTGTCCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCISTPTI*CPCPSY
Trigger: GTAGCTTGGACAGGGGCAGCAGATGGTAGGGGTTGA...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAAGCATTCAGGACTCTaGTCAAAAGTCTTTCCAACT +
Preference number: 4 (lower is better)
Translates to: DARFQPESRVLEGHPRGRKHSGL*SKVFPT
Trigger: AGTTGGAAAGACTTTTGAGCAGAGTCCTGAATGCTT...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR GCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATAACGTGGGGAATTCTCTaGACTCTCAAGAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCITWGIL*TLKSLR
Trigger: CCTGAGACTCTTGAGAGTGCAGAGAATTCCCCACGT...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAAGTTGGTCTTGTTTGTaGCCTTCTCAGCATAAAACA +
Preference number: 4 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKSWSCL*PSQHKT
Trigger: TGTTTTATGCTGAGAAGGGCACAAACAAGACCAACT...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR GCA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCATGAAGCCTGTGTTTaGATTCCAAGCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRHEACV*IPSFRI
Trigger: GATTCTGAAGCTTGGAATGCAAACACAGGCTTCATG...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATAACTGCAGGAAGGCATTaGTGGTACCACTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCITAGRH*WYHSLP
Trigger: TGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGT...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR TCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATAGAGGGTTCTCTTCTCTaGACCTCCAAAGCTCCATAT +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCIEGSLL*TSKAPY
Trigger: ATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTC...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CCA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATAGGAGGAGTGTTTTGTTaGTTTTGGCTGCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCIGGVFC*FWLPLS
Trigger: AGACAGAGGCAGCCAAAACCAACAAAACACTCCTCC...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR CCA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGCCAAAAATATGGCTTTaGAAAGGAGTTCCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERPKIWL*KGVPKN
Trigger: ATTTTTGGGAACTCCTTTCCAAAGCCATATTTTTGG...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CCA 90 bp GGCCCTGCGAGGGCAGCAAGAAGACAGCAGGCTTCCGGGTCCCACTaGCTGGGAAGACACAGAGGTGCTACGGCTGGTGCGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: GPARAARRQQASGSH*LGRHRGATAGAATR
Trigger: CCGGGTGGCCGCACCAGCCGTAGCACCTCTGTGTCTTCCCAGCCAGTGGGACCCGGAAGCCTGCTGTCTTCTTGCTGCCCTCGCAGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS GCA 90 bp AAGACAGCAGGCTTCCGGGTCCCACTGGCTGGGAAGACACAGAGGTaGTACGGCTGGTGCGGCCACCCGGCGAGACGGCTCCCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: KTAGFRVPLAGKTQR*YGWCGHPARRLPGL
Trigger: AAGCCCTGGGAGCCGTCTCGCCGGGTGGCCGCACCAGCCGTAGCACCTCTGTGTCTTCCCAGCCAGTGGGACCCGGAAGCCTGCTGTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS GCA 90 bp CTGAGGCAGTGGAGTTGGCAAGGCGGATGGCGCGGCGCTTGGCCCTaGGAGGGCAGCAAGAAGACAGCAGGCTTCCGGGTCCCACTGGCT +
Preference number: 5 (lower is better)
Translates to: LRQWSWQGGWRGAWP*EGSKKTAGFRVPLA
Trigger: AGCCAGTGGGACCCGGAAGCCTGCTGTCTTCTTGCTGCCCTCGCAGGGCCAAGCGCCGCGCCATCCGCCTTGCCAACTCCACTGCCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS CCA 90 bp GCCGGCCCTGCCACCGCCGCCAGGGGAGGAAGGTTGGCTCTCATCTaGGGTGTTGGCAGGAGGGGTAGGGATGCTGATAATGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: AGPATAARGGRLALI*GVGRRGRDADNGSH
Trigger: GTGGCTGCCATTATCAGCATCCCTACCCCTCCTGCCAACACCCCAGATGAGAGCCAACCTTCCTCCCCTGGCGGCGGTGGCAGGGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS GCA 90 bp TGGCAGGGCTGGGCCGTCCCCGGCCTGCTCTGCCTCCTCATCCTCTaGCAGGCGCTCGGCATTCTCCTTCTTTCGGTCCCGATACTCTTC +
Preference number: 5 (lower is better)
Translates to: WQGWAVPGLLCLLIL*QALGILLLSVPILF
Trigger: GAAGAGTATCGGGACCGAAAGAAGGAGAATGCCGAGCGCCTGGCAGAGGATGAGGAGGCAGAGCAGGCCGGGGACGGCCCAGCCCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCATGCTGTGCTCGGCGCTaGTCAGCCCGCTGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: EHAGVQLGEWGQSQCARACCARR*SARWFW
Trigger: CCAGAACCAGCGGGCTGACAAGCGCCGAGCACAGCA...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS TCA 90 bp GCAGAAAAAGGCCTGTGGGAAGCGTTCGCCACAGGGCTGCTCCCTTaGGGACCTGCGTGCAGAGCCGCGGCATGGGATGGTCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: AEKGLWEAFATGLLP*GPACRAAAWDGLHH
Trigger: GTGGTGGAGACCATCCCATGCCGCGGCTCTGCACGCAGGTCCTCAAGGGAGCAGCCCTGTGGCGAACGCTTCCCACAGGCCTTTTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAGGGAGCTGGTGCATCTaGAGGGGTGGCTGTGGATCC +
Preference number: 5 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAGSWCI*RGGCGS
Trigger: GGATCCACAGCCACCCCTCAAGATGCACCAGCTCCC...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCCGGATGGCGCGGCGCTaGGCCCTGCGAGGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: YSPALAGCQALISASPDSRMARR*ALRGQQ
Trigger: TTGCTGCCCTCGCAGGGCCAAGCGCCGCGCCATCCG...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS GCA 90 bp CGGGAACCAGGCCGTAGAAAGCCAGCTCTTCGTCGAAGGCCTGGATaGACTCCTGCCGTGGGCAATGCAGCCGCCCCGTTCGGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: REPGRRKPALRRRPG*TPAVGNAAAPFGRS
Trigger: ACTTCTACCGAACGGGGCGGCTGCATTGCCCACGGCAGGAGTGCATCCAGGCCTTCGACGAAGAGCTGGCTTTCTACGGCCTGGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCGGCTGGGTCCCACCGTaGGGGGCAGGTCTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: ALAGCQALISASPDSSPTGWVPP*GAGLGK
Trigger: TTTCCCCAGACCTGCCCCCAACGGTGGGACCCAGCC...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGGGGGGCTCCTGGGCTTaGCAGGAAGCTGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGGGSWA*QEAGRR
Trigger: TCTCCTGCCAGCTTCCTGCAAAGCCCAGGAGCCCCC...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
63% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGACTGAGGCAGTGGAGTaGGCAAGGCGGATGGCGCGG +
Preference number: 5 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGTEAVE*ARRMAR
Trigger: CCGCGCCATCCGCCTTGCCAACTCCACTGCCTCAGT...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CCA 90 bp GCAGAGGGGAGCATGAGGAAGTCACAGGCAGTGAACACAGCCTCCTaGGGAGAGAGTCCCAGCACCACAGGCCAGCCGAAGGGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: AEGSMRKSQAVNTAS*GESPSTTGQPKGFK
Trigger: CTTGAAGCCCTTCGGCTGGCCTGTGGTGCTGGGACTCTCTCCCCAGGAGGCTGTGTTCACTGCCTGTGACTTCCTCATGCTCCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CCA 90 bp CGGTTCCTGACACAAAGAGCCTGTTCCTCGCCACTGCCGCTGTCCTaGAGTAGATGGAGCAGAGCGATAAGGGCAGCACCTTCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: RFLTQRACSSPLPLS*SRWSRAIRAAPSSP
Trigger: CGGGGAGGAAGGTGCTGCCCTTATCGCTCTGCTCCATCTACTCCAGGACAGCGGCAGTGGCGAGGAACAGGCTCTTTGTGTCAGGAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419374.1
CDS-3UTR CAA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGTGGGACTGCCTAGAGTaGCCAAGAATAGCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGWDCLE*PRIARG
Trigger: CCCCCGGGCTATTCTTGGCAACTCTAGGCAGTCCCA...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAAGGCTGAAAGGTGTCTaGGGACTGCCTAGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: EHAGVQLGEWGQSQCARARLKGV*GLPRVA
Trigger: GGCAACTCTAGGCAGTCCCAAGACACCTTTCAGCCT...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAGAGTGCCTGGAGAACTaGAAGATGCGAAACACCCGG +
Preference number: 5 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAECLEN*KMRNTR
Trigger: CCGGGTGTTTCGCATCTTCAAGTTCTCCAGGCACTC...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGCGGCAGCAGCTGCTATaGCTAGAGTTTGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGRQQLL*LEFAGG
Trigger: GCCCCCAGCAAACTCTAGCAATAGCAGCTGCTGCCG...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCAGAGACATCGTCGTTCTaGGGCACCAAAAGCCCAATG +
Preference number: 5 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAETSSF*GTKSPM
Trigger: CATTGGGCTTTTGGTGCCCAAGAACGACGATGTCTC...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCATGGTGGTACCACTCTTaGCCAATCGGATCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAWWYHS*PIGSLP
Trigger: TGGCAAGGATCCGATTGGCAAAGAGTGGTACCACCA...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GAGCATGCAGGAGTCCAGCTGGGAGAGTGGGGCCAGTCCCAGTGTGCTAGGGCATACTGCAGGAAGGCATaGGTGGTACCACTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: EHAGVQLGEWGQSQCARAYCRKA*VVPLFA
Trigger: GGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTA...TGCCCTAGCACACTGGGACTGGCCCCACTCTCCCAGCTGGACTCCTGCATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCCGGATGGCGCGGCGCTaGGCCCTGCGAGGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: GEVPPVSYNSQSSETSQARMARR*ALRGQQ
Trigger: TTGCTGCCCTCGCAGGGCCAAGCGCCGCGCCATCCG...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS TCA 90 bp GGAGAATGTGGCTGTCTCCAGGATGGTGGGGGCTTGGAGACACCTTaGGCCACCCAAACAAGGAAACTGGGGGTGTCTAGAGAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: GECGCLQDGGGLETP*ATQTRKLGVSREAK
Trigger: CTTGGCCTCTCTAGACACCCCCAGTTTCCTTGTTTGGGTGGCTCAAGGTGTCTCCAAGCCCCCACCATCCTGGAGACAGCCACATTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGCTGTCATGGGGCTaGGCATTGAGGCTGGAACGG +
Preference number: 5 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRRLSWG*ALRLER
Trigger: CCGTTCCAGCCTCAATGCCAAGCCCCATGACAGCCT...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCCACAGGGATGAGATCTaGACAGTCTCGGGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: ALAGCQALISASPDSSPTHRDEI*TVSGKR
Trigger: CCTCTTCCCCGAGACTGTCAAGATCTCATCCCTGTG...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS GCA 90 bp CCCATTCTGCTTGTACTGCAGGAAGGCATTGGTGGTACCACTCTTTaGCAATCGGATCCTTGCCAAGCGCACCTTCTGCTGTGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: PILLVLQEGIGGTTL*QSDPCQAHLLLCSA
Trigger: CGCCGAGCACAGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTACAAGCAGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS GCA 90 bp TCCTCGCCACTGCCGCTGTCCTCAAGGCCCCCATTCTGCTTGTACTaGAGGAAGGCATTGGTGGTACCACTCTTTGCCAATCGGATCCTT +
Preference number: 5 (lower is better)
Translates to: SSPLPLSSRPPFCLY*RKALVVPLFANRIL
Trigger: AAGGATCCGATTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTACAAGCAGAATGGGGGCCTTGAGGACAGCGGCAGTGGCGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CCA 90 bp TGCCTGAGAGGTGTCTGGGGGCGTCTAGAGGGGCCAAGAAACACGTaGGGAATTCTCTGCACTCTCAAGAGTCTCAGGGAAGGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: CLRGVWGRLEGPRNT*GILCTLKSLREGRR
Trigger: TCTTCTGCCTTCCCTGAGACTCTTGAGAGTGCAGAGAATTCCCCACGTGTTTCTTGGCCCCTCTAGACGCCCCCAGACACCTCTCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCCACAGGGCTGCTCCCTaGAGGACCTGCGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: WSEALHNDTAAAAIARVCHRAAP*RTCVQS
Trigger: GCTCTGCACGCAGGTCCTCAAGGGAGCAGCCCTGTG...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCTGCTGTGCTCGGCGCTaGTCAGCCCGCTGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: GEVPPVSYNSQSSETSQACCARR*SARWFW
Trigger: CCAGAACCAGCGGGCTGACAAGCGCCGAGCACAGCA...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCACTGAGGCAGTGGAGTaGGCAAGGCGGATGGCGCGG +
Preference number: 5 (lower is better)
Translates to: WSEALHNDTAAAAIARVCTEAVE*ARRMAR
Trigger: CCGCGCCATCCGCCTTGCCAACTCCACTGCCTCAGT...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCGCCAGGGGAGGAAGGTaGGCTCTCATCTGGGGTGTT +
Preference number: 5 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLARGGR*ALIWGV
Trigger: AACACCCCAGATGAGAGCCAACCTTCCTCCCCTGGC...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GCCCATGATCTCCAAATACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCCAGCAGAGGACAGGGTaGCGGGGTCCATTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: AHDLQIQPSSCWLPGSYLQQRTG*RGPFPA
Trigger: TGCTGGAAATGGACCCCGCAACCCTGTCCTCTGCTG...GAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATTTGGAGATCATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GGCCTGTGGAAGCCCAGTGCTTCAGCTCCCACCAGGAAAAATGTCTGGGGTGGGAACTGGTCAGAGGCTTaGCATAATGACACGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GLWKPSASAPTRKNVWGGNWSEA*HNDTAA
Trigger: TGCTGCCGTGTCATTATGCAAAGCCTCTGACCAGTT...CCCACCCCAGACATTTTTCCTGGTGGGAGCTGAAGCACTGGGCTTCCACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CCA 90 bp AGAGTCTCAGGGAAGGCAGAAGAGCCTGGAATTCCTTTGCAGTGGTaGAGAGGAGACTGGGGCATCCAGAGGGGTAGAAATGGGACCAGA +
Preference number: 5 (lower is better)
Translates to: RVSGKAEEPGIPLQW*RGDWGIQRGRNGTR
Trigger: TCTGGTCCCATTTCTACCCCTCTGGATGCCCCAGTCTCCTCTCCACCACTGCAAAGGAATTCCAGGCTCTTCTGCCTTCCCTGAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 90 bp TCAAGAGTCTCAGGGAAGGCAGAAGAGCCTGGAATTCCTTTGCAGTaGTGGAGAGGAGACTGGGGCATCCAGAGGGGTAGAAATGGGACC +
Preference number: 5 (lower is better)
Translates to: SRVSGKAEEPGIPLQ*WRGDWGIQRGRNGT
Trigger: GGTCCCATTTCTACCCCTCTGGATGCCCCAGTCTCCTCTCCACCACTGCAAAGGAATTCCAGGCTCTTCTGCCTTCCCTGAGACTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 90 bp TTAGTGAGGGTGGCGTTTAGGAGAATGTGGCTGTCTCCAGGATGGTaGGGGCTTGGAGACACCTTGAGCCACCCAAACAAGGAAACTGGG +
Preference number: 5 (lower is better)
Translates to: LVRVAFRRMWLSPGW*GLGDTLSHPNKETG
Trigger: CCCAGTTTCCTTGTTTGGGTGGCTCAAGGTGTCTCCAAGCCCCCACCATCCTGGAGACAGCCACATTCTCCTAAACGCCACCCTCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGATGGACCCGAAAATCTaGCCAGCAATGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: CRIKALPSSESPRGGACRMDPKI*PAMVLG
Trigger: GCCCAGCACCATTGCTGGCAAGATTTTCGGGTCCAT...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCCAGCAAGTGGTGATGTaGCTGTTCAAAGGCAGAACG +
Preference number: 5 (lower is better)
Translates to: ALAGCQALISASPDSSPTQQVVM*LFKGRT
Trigger: CGTTCTGCCTTTGAACAGCAACATCACCACTTGCTG...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTAGGCTGTCATGGGGCTaGGCATTGAGGCTGGAACGG +
Preference number: 5 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSRLSWG*ALRLER
Trigger: CCGTTCCAGCCTCAATGCCAAGCCCCATGACAGCCT...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGACTCTCATCTGGGGTGTaGGCAGGAGGGGTAGGGATG +
Preference number: 5 (lower is better)
Translates to: DARFQPESRVLEGHPRGRLSSGV*AGGVGM
Trigger: CATCCCTACCCCTCCTGCCAACACCCCAGATGAGAG...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTGCCAGGGGAGGAAGGTaGGCTCTCATCTGGGGTGTT +
Preference number: 5 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSARGGR*ALIWGV
Trigger: AACACCCCAGATGAGAGCCAACCTTCCTCCCCTGGC...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTCAGCAGAGGACAGGGTaGCGGGGTCCATTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSQQRTG*RGPFPA
Trigger: TGCTGGAAATGGACCCCGCAACCCTGTCCTCTGCTG...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGCCTGAGAGCAGAGTTTaGGAAGGTCACCCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: CRIKALPSSESPRGGACRPESRV*EGHPRG
Trigger: CCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGG...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGCCCGGGAGGAGTGTTTaGTTGGTTTTGGCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRPGRSV*LVLAAS
Trigger: AGAGGCAGCCAAAACCAACAAAACACTCCTCCCGGG...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CCA 90 bp GGAATTCTCTGCACTCTCAAGAGTCTCAGGGAAGGCAGAAGAGCCTaGAATTCCTTTGCAGTGGTGGAGAGGAGACTGGGGCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: GILCTLKSLREGRRA*NSFAVVERRLGHPE
Trigger: CTCTGGATGCCCCAGTCTCCTCTCCACCACTGCAAAGGAATTCCAGGCTCTTCTGCCTTCCCTGAGACTCTTGAGAGTGCAGAGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 90 bp GACTTAGTGAGGGTGGCGTTTAGGAGAATGTGGCTGTCTCCAGGATaGTGGGGGCTTGGAGACACCTTGAGCCACCCAAACAAGGAAACT +
Preference number: 5 (lower is better)
Translates to: DLVRVAFRRMWLSPG*WGLGDTLSHPNKET
Trigger: AGTTTCCTTGTTTGGGTGGCTCAAGGTGTCTCCAAGCCCCCACCATCCTGGAGACAGCCACATTCTCCTAAACGCCACCCTCACTAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAGGTGTTGAAAGGGAGTaGGGTGTGTCTCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: DARFQPESRVLEGHPRGRGVERE*GVSPGR
Trigger: CCTCCCTGGAGACACACCCAACTCCCTTTCAACACC...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGTACTGCAGGAAGGCATaGGTGGTACCACTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: CRIKALPSSESPRGGACRYCRKA*VVPLFA
Trigger: GGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTA...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAACTCTCATCTGGGGTGTaGGCAGGAGGGGTAGGGATG +
Preference number: 5 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKLSSGV*AGGVGM
Trigger: CATCCCTACCCCTCCTGCCAACACCCCAGATGAGAG...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCTTCAGAATCTGGGAATaGTTGGGCCAGATGGAGATG +
Preference number: 5 (lower is better)
Translates to: ALAGCQALISASPDSSPTFRIWE*LGQMEM
Trigger: CATCTCCATCTGGCCCAACAATTCCCAGATTCTGAA...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCCGGCAGCAGCTGCTATaGCTAGAGTTTGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: WSEALHNDTAAAAIARVCRQQLL*LEFAGG
Trigger: GCCCCCAGCAAACTCTAGCAATAGCAGCTGCTGCCG...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAATACAGCCCAGCTCTaGCTGGTTGCCAGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: CRIKALPSSESPRGGACRNTAQL*LVARLL
Trigger: TAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATT...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCATGGAAACTACATCTTaGTCAGCCACCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: ALAGCQALISASPDSSPTMETTS*SATSSM
Trigger: CATGGAGCTGGTGGCTGACAAAGATGTAGTTTCCAT...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCGAGTCCCTCAGTTTCTaGCTCTGTAAAATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ALAGCQALISASPDSSPTESLSF*LCKMLG
Trigger: ACCCAGCATTTTACAGAGCAAGAAACTGAGGGACTC...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CCA 90 bp GCCAAGAGGAACCAGGAGGAAGAACTAAAGAGATGGGAAGGAGTCTaGGGGACATTTACAGAACCTAGGAGGGGCCTGGGCAATGTTCTG +
Preference number: 5 (lower is better)
Translates to: AKRNQEEELKRWEGV*GTFTEPRRGLGNVL
Trigger: CAGAACATTGCCCAGGCCCCTCCTAGGTTCTGTAAATGTCCCCCAGACTCCTTCCCATCTCTTTAGTTCTTCCTCCTGGTTCCTCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTTGGGACCAGAGGTGCTaGAAAGAGACTGAGAGTGCC +
Preference number: 5 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSWDQRC*KETESA
Trigger: GGCACTCTCAGTCTCTTTCAAGCACCTCTGGTCCCA...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGATTGCCAATCGGATCCTaGCCAAGCGCACCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: DARFQPESRVLEGHPRGRLPIGS*PSAPSA
Trigger: AGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCAA...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGCCCAGCTCTTGCTGGTaGCCAGGCTCTTATCTCAGC +
Preference number: 5 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERPSSCW*PGSYLS
Trigger: GCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGG...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCGACCTCCAACCAGAATaGGGGTTTCTACGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: YSPALAGCQALISASPDSDLQPE*GFLRFR
Trigger: TCTAAAGCGTAGAAACCCCAATTCTGGTTGGAGGTC...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR CAA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCTTGCCAATCGGATCCTaGCCAAGCGCACCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: WSEALHNDTAAAAIARVCLPIGS*PSAPSA
Trigger: AGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCAA...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTTGGTGGTACCACTCTTaGCCAATCGGATCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSWWYHS*PIGSLP
Trigger: TGGCAAGGATCCGATTGGCAAAGAGTGGTACCACCA...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAACACAGGGATGAGATCTaGACAGTCTCGGGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKHRDEI*TVSGKR
Trigger: CCTCTTCCCCGAGACTGTCAAGATCTCATCCCTGTG...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TGTCGGATCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGTTCAGAATCTGGGAATaGTTGGGCCAGATGGAGATG +
Preference number: 5 (lower is better)
Translates to: CRIKALPSSESPRGGACRFRIWE*LGQMEM
Trigger: CATCTCCATCTGGCCCAACAATTCCCAGATTCTGAA...CCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCCCTGAGAGCAGAGTTTaGGAAGGTCACCCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAPESRV*EGHPRG
Trigger: CCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGG...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGATGGAAACTACATCTTaGTCAGCCACCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQMETTS*SATSSM
Trigger: CATGGAGCTGGTGGCTGACAAAGATGTAGTTTCCAT...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TCAAAGCTTTGCCTTCATCTGAGAGCCCAAGGGGAGGAGCATGCAGGAGTCCAGCTTGTAAAGTTGGTCTaGTTTGTGCCCTTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SKLCLHLRAQGEEHAGVQLVKLV*FVPFSA
Trigger: TGCTGAGAAGGGCACAAACAAGACCAACTTTACAAG...CTGGACTCCTGCATGCTCCTCCCCTTGGGCTCTCAGATGAAGGCAAAGCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp CTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGAGGAAATCTCAGCAAGTGGTGATGTaGCTGTTCAAAGGCAGAACG +
Preference number: 5 (lower is better)
Translates to: LFSEPPKLHIPARGRRKSQQVVM*LFKGRT
Trigger: CGTTCTGCCTTTGAACAGCAACATCACCACTTGCTG...AGATTTCCTCCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GTGAGGGTTCTCTTCTCTGAACCTCCAAAGCTCCATATCCCAGCCAGAGGGAGGTTTCATGAAACTCCATaGCATAGTTCTCAGTGGGGG +
Preference number: 5 (lower is better)
Translates to: VRVLFSEPPKLHIPARGRFHETP*HSSQWG
Trigger: CCCCCACTGAGAACTATGCAATGGAGTTTCATGAAA...CCTCCCTCTGGCTGGGATATGGAGCTTTGGAGGTTCAGAGAAGAGAACCCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCAGCCCAACCTCCTCTCAGGTTTTATaGACTGATGGAAACTACATC +
Preference number: 5 (lower is better)
Translates to: ALAGCQALISASPDSSPTSSQVL*TDGNYI
Trigger: GATGTAGTTTCCATCAGTCAATAAAACCTGAGAGGA...GGTTGGGCTGGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCGGGAGGAGTGTTTTGTaGGTTTTGGCTGCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: WSEALHNDTAAAAIARVCGRSVL*VLAASV
Trigger: GACAGAGGCAGCCAAAACCAACAAAACACTCCTCCC...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR CAA 90 bp TACAGCCCAGCTCTTGCTGGTTGCCAGGCTCTTATCTCAGCCAGTCCAGACTCCCCCAAAAATATGGCTTaGGAAAGGAGTTCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: YSPALAGCQALISASPDSPKNMA*ERSSQK
Trigger: TTTTTGGGAACTCCTTTCCAAAGCCATATTTTTGGG...GGAGTCTGGACTGGCTGAGATAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAATGTCGGATCAAAGCTTaGCCTTCATCTGAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKCRIKA*PSSESP
Trigger: TGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGAATACAGCCCAGCTCTaGCTGGTTGCCAGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRNTAQL*LVARLL
Trigger: TAAGAGCCTGGCAACCAGCAAGAGCTGGGCTGTATT...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGCCGCCAACCTTACTAACTaGTTCACAGAGAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GEVPPVSYNSQSSETSQAANLTN*FTESSP
Trigger: AGGGGAGCTCTCTGTGAACAAGTTAGTAAGGTTGGC...GGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CCA 90 bp AGCATTCAGGACTCTGCTCAAAAGTCTTTCCAACTTGGCCATTGCTaGCTCTGTGATGTGTCATCTCAGAGCGTGTCCTCAACTGTGAGA +
Preference number: 5 (lower is better)
Translates to: SIQDSAQKSFQLGHC*LCDVSSQSVSSTVR
Trigger: TCTCACAGTTGAGGACACGCTCTGAGATGACACATCACAGAGCCAGCAATGGCCAAGTTGGAAAGACTTTTGAGCAGAGTCCTGAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR CAA 90 bp ATTGTAGGGGAGGAGGAGGAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAATCAAATGTTAGGAAGTaGGGCACAATCCCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: IVGEEEEEKFLLSPITPKSNVRK*GTIPEH
Trigger: GTGCTCTGGGATTGTGCCCAACTTCCTAACATTTGA...TTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTCCTCCTCCTCCCCTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGAAGAAAGGGGGATGCTTGTAAAGTaGGTCTTGTTTGTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: DFSLRAEFWKVTQEGEERGMLVK*VLFVPF
Trigger: GAAGGGCACAAACAAGACCAACTTTACAAGCATCCC...CCTTTCTTCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS-3UTR CAA 90 bp GATGCCAGATTTCAGCCTGAGAGCAGAGTTTTGGAAGGTCACCCAAGAGGGAGATTTCATGAAACTCCATaGCATAGTTCTCAGTGGGGG +
Preference number: 5 (lower is better)
Translates to: DARFQPESRVLEGHPRGRFHETP*HSSQWG
Trigger: CCCCCACTGAGAACTATGCAATGGAGTTTCATGAAA...TCTCCCTCTTGGGTGACCTTCCAAAACTCTGCTCTCAGGCTGAAATCTGGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGTGTCGGATCAAAGCTTaGCCTTCATCTGAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRCRIKA*PSSESP
Trigger: TGGGCTCTCAGATGAAGGCAAAGCTTTGATCCGACA...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp GAGGAGAAGTTCCTCCTGTCTCCTATAACTCCCAAAGTTCAGAAACATCCCAGGAACTGGTCAGAGGCTTaGCATAATGACACGGCAGCA +
Preference number: 5 (lower is better)
Translates to: EEKFLLSPITPKVQKHPRNWSEA*HNDTAA
Trigger: TGCTGCCGTGTCATTATGCAAAGCCTCTGACCAGTT...CCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGGAGGAACTTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCGTCAGCGCTCAGTATTaGTTTGTCAGTCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: WSEALHNDTAAAAIARVCVSAQY*FVSLIL
Trigger: CAGGATCAGACTGACAAACAAATACTGAGCGCTGAC...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS TCA 90 bp AAATATGGCTTTGGAAAGGAGTTCCCAAAAATGAAGAGGACCCTCTaGATCAGCAGGCCTACCCCTCACAGGGATGAGATCTTGACAGTC +
Preference number: 5 (lower is better)
Translates to: KYGFGKEFPKMKRTL*ISRPTPHRDEILTV
Trigger: GACTGTCAAGATCTCATCCCTGTGAGGGGTAGGCCTGCTGATTCAGAGGGTCCTCTTCATTTTTGGGAACTCCTTTCCAAAGCCATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS-3UTR CAA 90 bp TGGTCAGAGGCTTTGCATAATGACACGGCAGCAGCTGCTATTGCTAGAGTTTGCAGTGTTTTGTTGGTTTaGGCTGCCTCTGTCTTACCT +
Preference number: 5 (lower is better)
Translates to: WSEALHNDTAAAAIARVCSVLLV*AASVLP
Trigger: AGGTAAGACAGAGGCAGCCAAAACCAACAAAACACT...GCAAACTCTAGCAATAGCAGCTGCTGCCGTGTCATTATGCAAAGCCTCTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS GCA 90 bp ATACCCAATCCCAGTGATGGAAACTTAGAGAAGGATCACAGCATCTaGCCTAGACAGTATCTTTGGAAAGCTCATGAGTTCGATGATTCC +
Preference number: 5 (lower is better)
Translates to: IPNPSDGNLEKDHSI*PRQYLWKAHEFDDS
Trigger: GGAATCATCGAACTCATGAGCTTTCCAAAGATACTGTCTAGGGCAGATGCTGTGATCCTTCTCTAAGTTTCCATCACTGGGATTGGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS-3UTR CAA 90 bp ATTTCCTGGCTACTTCCCCACTATGTGGACCATTTCATGAAACTCCATTGCATATCCTCTCAGGTTTTATaGACTGATGGAAACTACATC +
Preference number: 5 (lower is better)
Translates to: ISWLLPHYVDHFMKLHCISSQVL*TDGNYI
Trigger: GATGTAGTTTCCATCAGTCAATAAAACCTGAGAGGA...TATGCAATGGAGTTTCATGAAATGGTCCACATAGTGGGGAAGTAGCCAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS TCA 90 bp CCTAGACAGTATCTTTGGAAAGCTCATGAGTTCGATGATTCCATTTaGTACTTTTATCCCAACTCTGTTTCTTCTGCAGGGATCGACAAA +
Preference number: 5 (lower is better)
Translates to: PRQYLWKAHEFDDSI*YFYPNSVSSAGIDK
Trigger: TTTGTCGATCCCTGCAGAAGAAACAGAGTTGGGATAAAAGTATCAAATGGAATCATCGAACTCATGAGCTTTCCAAAGATACTGTCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS GCA 72 bp GGCTTCCGGGTCCCACTGGCTGGGAAGACACAGAGGTaGTACGGCTGGTGCGGCCACCCGGCGAGACGGCTC +
Preference number: 6 (lower is better)
Translates to: GFRVPLAGKTQR*YGWCGHPARRL
Trigger: GAGCCGTCTCGCCGGGTGGCCGCACCAGCCGTAGCACCTCTGTGTCTTCCCAGCCAGTGGGACCCGGAAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS CAA 90 bp CGGCTGACTGAGGCAGTGGAGTTGGCAAGGCGGATGGCGCGGCGCTaGGCCCTGCGAGGGCAGCAAGAAGACAGCAGGCTTCCGGGTCCC +
Preference number: 6 (lower is better)
Translates to: RLTEAVELARRMARR*ALRGQQEDSRLPGP
Trigger: GGGACCCGGAAGCCTGCTGTCTTCTTGCTGCCCTCGCAGGGCCAAGCGCCGCGCCATCCGCCTTGCCAACTCCACTGCCTCAGTCAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS CCA 72 bp GTCCCACTGGCTGGGAAGACACAGAGGTGCTACGGCTaGTGCGGCCACCCGGCGAGACGGCTCCCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: VPLAGKTQRCYG*CGHPARRLPGL
Trigger: AAGCCCTGGGAGCCGTCTCGCCGGGTGGCCGCACCAGCCGTAGCACCTCTGTGTCTTCCCAGCCAGTGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS TCA 72 bp GGCCTGTGGGAAGCGTTCGCCACAGGGCTGCTCCCTTaGGGACCTGCGTGCAGAGCCGCGGCATGGGATGGT +
Preference number: 6 (lower is better)
Translates to: GLWEAFATGLLP*GPACRAAAWDG
Trigger: ACCATCCCATGCCGCGGCTCTGCACGCAGGTCCTCAAGGGAGCAGCCCTGTGGCGAACGCTTCCCACAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS GCA 72 bp TGGAGTTGGCAAGGCGGATGGCGCGGCGCTTGGCCCTaGGAGGGCAGCAAGAAGACAGCAGGCTTCCGGGTC +
Preference number: 6 (lower is better)
Translates to: WSWQGGWRGAWP*EGSKKTAGFRV
Trigger: GACCCGGAAGCCTGCTGTCTTCTTGCTGCCCTCGCAGGGCCAAGCGCCGCGCCATCCGCCTTGCCAACTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS CAA 72 bp TCCTGCATGCTGCCACGGCTGACTGAGGCAGTGGAGTaGGCAAGGCGGATGGCGCGGCGCTTGGCCCTGCGA +
Preference number: 6 (lower is better)
Translates to: SCMLPRLTEAVE*ARRMARRLALR
Trigger: TCGCAGGGCCAAGCGCCGCGCCATCCGCCTTGCCAACTCCACTGCCTCAGTCAGCCGTGGCAGCATGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS CAA 90 bp ATGTCCAGCTCCTGCATGCTGCCACGGCTGACTGAGGCAGTGGAGTaGGCAAGGCGGATGGCGCGGCGCTTGGCCCTGCGAGGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: MSSSCMLPRLTEAVE*ARRMARRLALRGQQ
Trigger: TTGCTGCCCTCGCAGGGCCAAGCGCCGCGCCATCCGCCTTGCCAACTCCACTGCCTCAGTCAGCCGTGGCAGCATGCAGGAGCTGGACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS CCA 72 bp AGGCAGTGGAGTTGGCAAGGCGGATGGCGCGGCGCTTaGCCCTGCGAGGGCAGCAAGAAGACAGCAGGCTTC +
Preference number: 6 (lower is better)
Translates to: RQWSWQGGWRGA*PCEGSKKTAGF
Trigger: GAAGCCTGCTGTCTTCTTGCTGCCCTCGCAGGGCCAAGCGCCGCGCCATCCGCCTTGCCAACTCCACTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS GCA 72 bp GGCCGTAGAAAGCCAGCTCTTCGTCGAAGGCCTGGATaGACTCCTGCCGTGGGCAATGCAGCCGCCCCGTTC +
Preference number: 6 (lower is better)
Translates to: GRRKPALRRRPG*TPAVGNAAAPF
Trigger: GAACGGGGCGGCTGCATTGCCCACGGCAGGAGTGCATCCAGGCCTTCGACGAAGAGCTGGCTTTCTACGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS GCA 72 bp TGGCTCCTGCGCAGCCCTGCCAGCATGTCCAGCTCCTaGATGCTGCCACGGCTGACTGAGGCAGTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: WLLRSPASMSSS*MLPRLTEAVEL
Trigger: CAACTCCACTGCCTCAGTCAGCCGTGGCAGCATGCAGGAGCTGGACATGCTGGCAGGGCTGCGCAGGAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CCA 72 bp AGGGCAGCAAGAAGACAGCAGGCTTCCGGGTCCCACTaGCTGGGAAGACACAGAGGTGCTACGGCTGGTGCG +
Preference number: 6 (lower is better)
Translates to: RAARRQQASGSH*LGRHRGATAGA
Trigger: CGCACCAGCCGTAGCACCTCTGTGTCTTCCCAGCCAGTGGGACCCGGAAGCCTGCTGTCTTCTTGCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218176.4
ENST00000376477.5
ENST00000419374.1
CDS TCA 72 bp CGCAGTTCAGGTCAAGGCTGTCATGGGGCTTGGCATTaGGGCTGGAACGGCTCTGAGGGGCATGGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RSSGQGCHGAWH*GWNGSEGHGSC
Trigger: GCAGGAGCCATGCCCCTCAGAGCCGTTCCAGCCTCAATGCCAAGCCCCATGACAGCCTTGACCTGAACTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CCA 72 bp AGCATGAGGAAGTCACAGGCAGTGAACACAGCCTCCTaGGGAGAGAGTCCCAGCACCACAGGCCAGCCGAAG +
Preference number: 6 (lower is better)
Translates to: SMRKSQAVNTAS*GESPSTTGQPK
Trigger: CTTCGGCTGGCCTGTGGTGCTGGGACTCTCTCCCCAGGAGGCTGTGTTCACTGCCTGTGACTTCCTCATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CAA 90 bp GCACCACAGGCCAGCCGAAGGGCTTCAAGTCCCGGGAGGAGTGTTTaGTTGGTTTTGGCTGCCTCTGTCTTACCTGCTCTAGGTAGGACC +
Preference number: 6 (lower is better)
Translates to: APQASRRASSPGRSV*LVLAASVLPALGRT
Trigger: GGTCCTACCTAGAGCAGGTAAGACAGAGGCAGCCAAAACCAACAAAACACTCCTCCCGGGACTTGAAGCCCTTCGGCTGGCCTGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS TCA 72 bp GGCTGTCTCCAGGATGGTGGGGGCTTGGAGACACCTTaGGCCACCCAAACAAGGAAACTGGGGGTGTCTAGA +
Preference number: 6 (lower is better)
Translates to: GCLQDGGGLETP*ATQTRKLGVSR
Trigger: TCTAGACACCCCCAGTTTCCTTGTTTGGGTGGCTCAAGGTGTCTCCAAGCCCCCACCATCCTGGAGACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS GCA 72 bp GGCATTGGTGGTACCACTCTTTGCCAATCGGATCCTTaGCAAGCGCACCTTCTGCTGTGCTCGGCGCTTGTC +
Preference number: 6 (lower is better)
Translates to: GIGGTTLCQSDP*QAHLLLCSALV
Trigger: GACAAGCGCCGAGCACAGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCAAAGAGTGGTACCACCAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CCA 72 bp AGGGTGGCGTTTAGGAGAATGTGGCTGTCTCCAGGATaGTGGGGGCTTGGAGACACCTTGAGCCACCCAAAC +
Preference number: 6 (lower is better)
Translates to: RVAFRRMWLSPG*WGLGDTLSHPN
Trigger: GTTTGGGTGGCTCAAGGTGTCTCCAAGCCCCCACCATCCTGGAGACAGCCACATTCTCCTAAACGCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 72 bp CAGGGAGACTTAGTGAGGGTGGCGTTTAGGAGAATGTaGCTGTCTCCAGGATGGTGGGGGCTTGGAGACACC +
Preference number: 6 (lower is better)
Translates to: QGDLVRVAFRRM*LSPGWWGLGDT
Trigger: GGTGTCTCCAAGCCCCCACCATCCTGGAGACAGCCACATTCTCCTAAACGCCACCCTCACTAAGTCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 72 bp ACACAAAGAGCCTGTTCCTCGCCACTGCCGCTGTCCTaGAGTAGATGGAGCAGAGCGATAAGGGCAGCACCT +
Preference number: 6 (lower is better)
Translates to: TQRACSSPLPLS*SRWSRAIRAAP
Trigger: AGGTGCTGCCCTTATCGCTCTGCTCCATCTACTCCAGGACAGCGGCAGTGGCGAGGAACAGGCTCTTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419374.1
CDS CAA 90 bp CCCCATTCTGCTTGTACTGCAGGAAGGCATTGGTGGTACCACTCTTaGCCAATCGGATCCTTGCCAAGCGCACCTTCTGCTGTGCTCGGC +
Preference number: 6 (lower is better)
Translates to: PHSACTAGRHWWYHS*PIGSLPSAPSAVLG
Trigger: GCCGAGCACAGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTACAAGCAGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS TCA 72 bp CCCCCTCATGGATCTGGAAAGGGAGCTGGTGCATCTTaGGGGGTGGCTGTGGATCCAGGAGGTTGTAAAGAG +
Preference number: 6 (lower is better)
Translates to: PPHGSGKGAGAS*GVAVDPGGCKE
Trigger: CTCTTTACAACCTCCTGGATCCACAGCCACCCCTCAAGATGCACCAGCTCCCTTTCCAGATCCATGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 72 bp GAGCCTGGAATTCCTTTGCAGTGGTGGAGAGGAGACTaGGGCATCCAGAGGGGTAGAAATGGGACCAGAGGT +
Preference number: 6 (lower is better)
Translates to: EPGIPLQWWRGD*GIQRGRNGTRG
Trigger: ACCTCTGGTCCCATTTCTACCCCTCTGGATGCCCCAGTCTCCTCTCCACCACTGCAAAGGAATTCCAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 72 bp GGTGTCTGGGGGCGTCTAGAGGGGCCAAGAAACACGTaGGGAATTCTCTGCACTCTCAAGAGTCTCAGGGAA +
Preference number: 6 (lower is better)
Translates to: GVWGRLEGPRNT*GILCTLKSLRE
Trigger: TTCCCTGAGACTCTTGAGAGTGCAGAGAATTCCCCACGTGTTTCTTGGCCCCTCTAGACGCCCCCAGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 72 bp GCTTGGAGACACCTTGAGCCACCCAAACAAGGAAACTaGGGGTGTCTAGAGAGGCCAAGAGGAACCAGGAGG +
Preference number: 6 (lower is better)
Translates to: AWRHLEPPKQGN*GCLERPRGTRR
Trigger: CCTCCTGGTTCCTCTTGGCCTCTCTAGACACCCCCAGTTTCCTTGTTTGGGTGGCTCAAGGTGTCTCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 72 bp GTGGCGTTTAGGAGAATGTGGCTGTCTCCAGGATGGTaGGGGCTTGGAGACACCTTGAGCCACCCAAACAAG +
Preference number: 6 (lower is better)
Translates to: VAFRRMWLSPGW*GLGDTLSHPNK
Trigger: CTTGTTTGGGTGGCTCAAGGTGTCTCCAAGCCCCCACCATCCTGGAGACAGCCACATTCTCCTAAACGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CAA 72 bp AGGCATTGGTGGTACCACTCTTTGCCAATCGGATCCTaGCCAAGCGCACCTTCTGCTGTGCTCGGCGCTTGT +
Preference number: 6 (lower is better)
Translates to: RHWWYHSLPIGS*PSAPSAVLGAC
Trigger: ACAAGCGCCGAGCACAGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCAAAGAGTGGTACCACCAATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CAA 72 bp GCCAGCCGAAGGGCTTCAAGTCCCGGGAGGAGTGTTTaGTTGGTTTTGGCTGCCTCTGTCTTACCTGCTCTA +
Preference number: 6 (lower is better)
Translates to: ASRRASSPGRSV*LVLAASVLPAL
Trigger: TAGAGCAGGTAAGACAGAGGCAGCCAAAACCAACAAAACACTCCTCCCGGGACTTGAAGCCCTTCGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CAA 90 bp TGTGACCCTGGCCAGGCACTCAAACCTTCTGAGTCCCTCAGTTTCTaGCTCTGTAAAATGCTGGGTGGCCAAGTGAGAAATGGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: CDPGQALKPSESLSF*LCKMLGGQVRNGPG
Trigger: GCCAGGCCCATTTCTCACTTGGCCACCCAGCATTTTACAGAGCAAGAAACTGAGGGACTCAGAAGGTTTGAGTGCCTGGCCAGGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS GCA 72 bp CTTGTACTGCAGGAAGGCATTGGTGGTACCACTCTTTaGCAATCGGATCCTTGCCAAGCGCACCTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: LVLQEGIGGTTL*QSDPCQAHLLL
Trigger: CAGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CAA 72 bp GCTTGTACTGCAGGAAGGCATTGGTGGTACCACTCTTaGCCAATCGGATCCTTGCCAAGCGCACCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: ACTAGRHWWYHS*PIGSLPSAPSA
Trigger: AGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTACAAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CAA 72 bp AGGGCTTCAAGTCCCGGGAGGAGTGTTTTGTTGGTTTaGGCTGCCTCTGTCTTACCTGCTCTAGGTAGGACC +
Preference number: 6 (lower is better)
Translates to: RASSPGRSVLLV*AASVLPALGRT
Trigger: GGTCCTACCTAGAGCAGGTAAGACAGAGGCAGCCAAAACCAACAAAACACTCCTCCCGGGACTTGAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CAA 72 bp AGCCGAAGGGCTTCAAGTCCCGGGAGGAGTGTTTTGTaGGTTTTGGCTGCCTCTGTCTTACCTGCTCTAGGT +
Preference number: 6 (lower is better)
Translates to: SRRASSPGRSVL*VLAASVLPALG
Trigger: ACCTAGAGCAGGTAAGACAGAGGCAGCCAAAACCAACAAAACACTCCTCCCGGGACTTGAAGCCCTTCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CCA 72 bp GGAATTCCAAGGGCCGGGACTCAAATGTTAGGAAGTTaGGCACAATCCCAGAGCACCCAGGGGATCTATGAA +
Preference number: 6 (lower is better)
Translates to: GIPRAGTQMLGS*AQSQSTQGIYE
Trigger: TTCATAGATCCCCTGGGTGCTCTGGGATTGTGCCCAACTTCCTAACATTTGAGTCCCGGCCCTTGGAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218176.4
CDS CCA 72 bp TGTGTCATCTCAGAGCGTGTCCTCAACTGTGAGACATaGGCAGCCATCCACCATCACAGAGTTGTTGTGAGG +
Preference number: 6 (lower is better)
Translates to: CVISERVLNCET*AAIHHHRVVVR
Trigger: CCTCACAACAACTCTGTGATGGTGGATGGCTGCCCATGTCTCACAGTTGAGGACACGCTCTGAGATGACACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS TCA 72 bp TCTGTGATGTGTCATCTCAGAGCGTGTCCTCAACTGTaGGACATGGGCAGCCATCCACCATCACAGAGTTGT +
Preference number: 6 (lower is better)
Translates to: SVMCHLRACPQL*DMGSHPPSQSC
Trigger: ACAACTCTGTGATGGTGGATGGCTGCCCATGTCTCACAGTTGAGGACACGCTCTGAGATGACACATCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CAA 72 bp CTCCCACAGAGACAGAGCAGAGCCAACCTTACTAACTaGTTCACAGAGAGCTCCCCTGAAGATCAGGGAGAT +
Preference number: 6 (lower is better)
Translates to: LPQRQSRANLTN*FTESSPEDQGD
Trigger: ATCTCCCTGATCTTCAGGGGAGCTCTCTGTGAACAAGTTAGTAAGGTTGGCTCTGCTCTGTCTCTGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS TCA 72 bp TTTGGAAAGGAGTTCCCAAAAATGAAGAGGACCCTCTaGATCAGCAGGCCTACCCCTCACAGGGATGAGATC +
Preference number: 6 (lower is better)
Translates to: FGKEFPKMKRTL*ISRPTPHRDEI
Trigger: GATCTCATCCCTGTGAGGGGTAGGCCTGCTGATTCAGAGGGTCCTCTTCATTTTTGGGAACTCCTTTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218176.4
ENST00000376477.5
CDS CCA 72 bp GACTCTGCTCAAAAGTCTTTCCAACTTGGCCATTGCTaGCTCTGTGATGTGTCATCTCAGAGCGTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: DSAQKSFQLGHC*LCDVSSQSVSS
Trigger: TGAGGACACGCTCTGAGATGACACATCACAGAGCCAGCAATGGCCAAGTTGGAAAGACTTTTGAGCAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS TCA 72 bp TCAAAAGTCTTTCCAACTTGGCCATTGCTGGCTCTGTaGTGTGTCATCTCAGAGCGTGTCCTCAACTGTGAG +
Preference number: 6 (lower is better)
Translates to: SKVFPTWPLLAL*CVISERVLNCE
Trigger: CTCACAGTTGAGGACACGCTCTGAGATGACACATCACAGAGCCAGCAATGGCCAAGTTGGAAAGACTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CAA 72 bp AATACTCAGTTCCAGCCCACTGTCAGCGCTCAGTATTaGTTTGTCAGTCTGATCCTGGACCTCCAACCAGAA +
Preference number: 6 (lower is better)
Translates to: NTQFQPTVSAQY*FVSLILDLQPE
Trigger: TTCTGGTTGGAGGTCCAGGATCAGACTGACAAACAAATACTGAGCGCTGACAGTGGGCTGGAACTGAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CAA 90 bp AGCCATCAAAATACTCAGTTCCAGCCCACTGTCAGCGCTCAGTATTaGTTTGTCAGTCTGATCCTGGACCTCCAACCAGAATTGGGGTTT +
Preference number: 6 (lower is better)
Translates to: SHQNTQFQPTVSAQY*FVSLILDLQPELGF
Trigger: AAACCCCAATTCTGGTTGGAGGTCCAGGATCAGACTGACAAACAAATACTGAGCGCTGACAGTGGGCTGGAACTGAGTATTTTGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS TCA 72 bp ACAGATACTGAGCACCAACTGTATACCCAATCCCAGTaGTGGAAACTTAGAGAAGGATCACAGCATCTGCCC +
Preference number: 6 (lower is better)
Translates to: TDTEHQLYTQSQ*WKLREGSQHLP
Trigger: GGGCAGATGCTGTGATCCTTCTCTAAGTTTCCATCACTGGGATTGGGTATACAGTTGGTGCTCAGTATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS GCA 72 bp CCCAGTGATGGAAACTTAGAGAAGGATCACAGCATCTaGCCTAGACAGTATCTTTGGAAAGCTCATGAGTTC +
Preference number: 6 (lower is better)
Translates to: PSDGNLEKDHSI*PRQYLWKAHEF
Trigger: GAACTCATGAGCTTTCCAAAGATACTGTCTAGGGCAGATGCTGTGATCCTTCTCTAAGTTTCCATCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376477.5
CDS CAA 72 bp TTGTTTGTCAGTCTGATCCTGGACCTCCAACCAGAATaGGGGTTTCTACGCTTTAGAAACCCCAAATCAACT +
Preference number: 6 (lower is better)
Translates to: LFVSLILDLQPE*GFLRFRNPKST
Trigger: AGTTGATTTGGGGTTTCTAAAGCGTAGAAACCCCAATTCTGGTTGGAGGTCCAGGATCAGACTGACAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376477.5