RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000131398

Ensembl transcript IDs: ENST00000376959.6, ENST00000474951.1, ENST00000477616.2, ENST00000670667.1

Found 863 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTGTCCGTGCGTTCCCGGAGCGCAGGAGGGGTGCGACATGCGTGTaGGGGGCGCGTCATGCAGCGCATGCGTGTAGGTGCAGGCACCCT +
Preference number: 1 (lower is better)
Translates to: RVRAFPERRRGATCV*GARHAAHACRCRHP
Trigger: AGGGTGCCTGCACCTACACGCATGCGCTGCATGACGCGCCCCCCACACGCATGTCGCACCCCTCCTGCGCTCCGGGAACGCACGGACACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR TCA 90 bp GGAAGGGGCCACGCCGACCCCTCCCTCCCTGCCCTGCGGGTGGGCTaGGAAGACCCGCCATTAGCACCAGAGTTGGACGATTTGCAGACC +
Preference number: 1 (lower is better)
Translates to: GRGHADPSLPALRVG*EDPPLAPELDDLQT
Trigger: GGTCTGCAAATCGTCCAACTCTGGTGCTAATGGCGGGTCTTCTCAGCCCACCCGCAGGGCAGGGAGGGAGGGGTCGGCGTGGCCCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR TCA 90 bp CCCTCCCACCACCTGAGCTCAACTCGGCCCCGCCCTCCCGCCACCTaGGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCC +
Preference number: 1 (lower is better)
Translates to: PSHHLSSTRPRPPAT*AQLRSGAWVTVPPS
Trigger: GGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCGGGAGGGCGGGGCCGAGTTGAGCTCAGGTGGTGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 90 bp AAACCCGCGCATGCGGCCCCTGGCGGCTTATTGCTGAGGTGGACTTaGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGG +
Preference number: 1 (lower is better)
Translates to: KPAHAAPGGLLLRWT*SGGSRLGKACSVWG
Trigger: CCCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGCCGCATGCGCGGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 90 bp TGGGACTCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTaGGGCTGCCTGCAGGGTTCTGCACCCCCGCAGGGAGCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: WDSRSSNSVCGFCKA*GCLQGSAPPQGALW
Trigger: CCACAGAGCTCCCTGCGGGGGTGCAGAACCCTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGAGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR TCA 90 bp GGAGGGCTGGGGAGAGGGACATCTTTAAAGGGTCCAAGAAGGCTCTaGGCTTCTGACGGGTGCGGGAAGGCTCTCACAGGCATCTCACAG +
Preference number: 1 (lower is better)
Translates to: GGLGRGTSLKGPRRL*ASDGCGKALTGISQ
Trigger: CTGTGAGATGCCTGTGAGAGCCTTCCCGCACCCGTCAGAAGCTCAGAGCCTTCTTGGACCCTTTAAAGATGTCCCTCTCCCCAGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR CCA 90 bp GGCATCTCACAGCTAATGGGACTCAAGATCCAGCAACAGTGTGTGTaGTTTCTGCAAAGCCTGGGGCTGCCTGCAGGGTTCTGCACCCCC +
Preference number: 1 (lower is better)
Translates to: GISQLMGLKIQQQCV*FLQSLGLPAGFCTP
Trigger: GGGGGTGCAGAACCCTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGAGTCCCATTAGCTGTGAGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR TCA 90 bp GGCTGGGATCCCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTaGTACTCCAGTGTTCCTCCCTTCGGGAACAGCCTCTGTGATCAT +
Preference number: 1 (lower is better)
Translates to: GWDPSRAGCCRFPIF*YSSVPPFGNSLCDH
Trigger: ATGATCACAGAGGCTGTTCCCGAAGGGAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGGGATCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR TCA 90 bp GGGGAGAGGGACATCTTTAAAGGGTCCAAGAAGGCTCTGAGCTTCTaGCGGGTGCGGGAAGGCTCTCACAGGCATCTCACAGCTAATGGG +
Preference number: 1 (lower is better)
Translates to: GERDIFKGSKKALSF*RVREGSHRHLTANG
Trigger: CCCATTAGCTGTGAGATGCCTGTGAGAGCCTTCCCGCACCCGTCAGAAGCTCAGAGCCTTCTTGGACCCTTTAAAGATGTCCCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR GCA 90 bp CAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTaGCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCTG +
Preference number: 1 (lower is better)
Translates to: QRLSRRSVWGLGDVA*QGQSQNSGCRSHVL
Trigger: CAGGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR GCA 90 bp GGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGGTaGGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGT +
Preference number: 1 (lower is better)
Translates to: GNLGWTSLLGLWGYG*GTGLRLWGCPRNVS
Trigger: ACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR GCA 90 bp GAGGGTGCTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTaGGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGA +
Preference number: 1 (lower is better)
Translates to: EGAWGGSGSLELQTG*AYLGSSSIKGTWAG
Trigger: TCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CCA 90 bp CGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCTaGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCA +
Preference number: 1 (lower is better)
Translates to: RARVSLRILGAGLMS*EWREIVGEFRVLGP
Trigger: TGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 90 bp GGTTCAGGGAGCCTCTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTaGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCT +
Preference number: 1 (lower is better)
Translates to: GSGSLCVQRLSRRSV*GLGDVACQGQSQNS
Trigger: AGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAGAGGCTCCCTGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR GCA 90 bp GGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTaGAGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATT +
Preference number: 1 (lower is better)
Translates to: GLGDVACQGQSQNSG*RSHVLGMEGDSRGI
Trigger: AATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 90 bp TCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATaGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGT +
Preference number: 1 (lower is better)
Translates to: SREPGLDKSVRALGI*VRNRPEALGVSKKC
Trigger: ACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 90 bp AGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCTGGGAATaGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCAT +
Preference number: 1 (lower is better)
Translates to: RVSLRILGAGLMSWE*REIVGEFRVLGPDH
Trigger: ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR TCA 90 bp GGCAAGACAGACAGAGTCAGGCAGACAGAGACACAAAAGGACGGATaGCAAGAGACAGATGGACAGAGATGGACCAAGGAGATGGAGAGA +
Preference number: 1 (lower is better)
Translates to: GKTDRVRQTETQKDG*QETDGQRWTKEMER
Trigger: TCTCTCCATCTCCTTGGTCCATCTCTGTCCATCTGTCTCTTGTCATCCGTCCTTTTGTGTCTCTGTCTGCCTGACTCTGTCTGTCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR CCA 90 bp TACTCCAGTGTTCCTCCCTTCGGGAACAGCCTCTGTGATCATCTGTaGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGT +
Preference number: 1 (lower is better)
Translates to: YSSVPPFGNSLCDHL*TTLNGNTLNLNKPC
Trigger: ACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATGATCACAGAGGCTGTTCCCGAAGGGAGGAACACTGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGGGTCCAAGAAGGCTCTaGGCTTCTGACGGGTGCGGG +
Preference number: 2 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPGPRRL*ASDGCG
Trigger: CCCGCACCCGTCAGAAGCTCAGAGCCTTCTTGGACC...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR CCA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATGGCGTGGGGGAGGCTTaGGGAAGGGGCCACGCCGAC +
Preference number: 2 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNGVGEA*GRGHAD
Trigger: GTCGGCGTGGCCCCTTCCCCAAGCCTCCCCCACGCC...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACGGCCCGCGATGCTGCTaGGGCTGCGGGATTTCTCGT +
Preference number: 2 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYGPRCC*GCGISR
Trigger: ACGAGAAATCCCGCAGCCTCAGCAGCATCGCGGGCC...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CAA 90 bp CAAACCCGCGCATGCGGCCCCTGGCGGCTTATTGCTGAGGTGGACTaGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: QTRACGPWRLIAEVD*EWGLQVREGMQCVG
Trigger: CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGCCGCATGCGCGGGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATCGCCCTCCCGCCACCTaGGCTCAACTCCGATCTGGG +
Preference number: 2 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNRPPAT*AQLRSG
Trigger: CCCAGATCGGAGTTGAGCTCAGGTGGCGGGAGGGCG...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGGGGCCCGGGGGTGTCTaGTGGCATCGTCATCTCGGT +
Preference number: 2 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRGPGGV*WHRHLG
Trigger: ACCGAGATGACGATGCCAGCAGACACCCCCGGGCCC...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGAGGGCAGGGAACGGTaGGGCCGCCGTAGCGGGGCT +
Preference number: 2 (lower is better)
Translates to: VCGDWEMWRARVSLRILGEGRER*GRRSGA
Trigger: AGCCCCGCTACGGCGGCCGCACCGTTCCCTGCCCTC...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR TCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATCGCCCTCCCACCACCTaGGCTCAACTCGGCCCCGCC +
Preference number: 2 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHRPPTT*AQLGPA
Trigger: GGCGGGGCCGAGTTGAGCTCAGGTGGTGGGAGGGCG...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACTTCCACCCGCGAGCGTaGCGCGGTGAGGACCGCTGG +
Preference number: 2 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDFHPRA*RGEDRW
Trigger: CCAGCGGTCCTCACCGCGTCACGCTCGCGGGTGGAA...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACGAGGTAGCGCATCCTTaGGCCAGGATAGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYEVAHP*ARIGGG
Trigger: CCCACCTCCTATCCTGGCTCAAGGATGCGCTACCTC...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCGACCCCTCCCTCCCTaGCCTGCGGGTGGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDRPLPP*PAGGLR
Trigger: TCTCAGCCCACCCGCAGGGCAGGGAGGGAGGGGTCG...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGAAGCCTGGGGCTGCCTaGAGGGTTCTGCACCCCCGC +
Preference number: 2 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGKPGAA*RVLHPR
Trigger: GCGGGGGTGCAGAACCCTGCAGGCAGCCCCAGGCTT...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR TCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCGCCCTCCCGCCACCTaGGCTCAACTCCGATCTGGG +
Preference number: 2 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVRPPAT*AQLRSG
Trigger: CCCAGATCGGAGTTGAGCTCAGGTGGCGGGAGGGCG...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGCTCCTTCGGCTTTCGTaGAGGTCAGGGGAAACGGGG +
Preference number: 2 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRLLRLS*RSGETG
Trigger: CCCCGTTTCCCCTGACCTTCACGAAAGCCGAAGGAG...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGGGGAGCGCTAAAGGATaGAGGGCAGGGTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGGSAKG*RAGSGE
Trigger: CTCCCCCGACCCTGCCCTCCATCCTTTAGCGCTCCC...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CAA 90 bp TCTGGGACCGGTGTGGTCTCTGGGCTTGGGGGAGGTAGCGCATCCTaGAGCCAGGATAGGAGGTGGGAAATGATTTTCCACCCGCGAGCG +
Preference number: 2 (lower is better)
Translates to: SGTGVVSGLGGGSAS*SQDRRWEMIFHPRA
Trigger: CGCTCGCGGGTGGAAAATCATTTCCCACCTCCTATCCTGGCTCAAGGATGCGCTACCTCCCCCAAGCCCAGAGACCACACCGGTCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCGGCCCGCGATGCTGCTaGGGCTGCGGGATTTCTCGT +
Preference number: 2 (lower is better)
Translates to: EMWRARVSLRILGAGLMSGPRCC*GCGISR
Trigger: ACGAGAAATCCCGCAGCCTCAGCAGCATCGCGGGCC...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGCGCCCTCCCGCCACCTaGGCTCAACTCCGATCTGGG +
Preference number: 2 (lower is better)
Translates to: GMEGDSRGISCARARSSQRPPAT*AQLRSG
Trigger: CCCAGATCGGAGTTGAGCTCAGGTGGCGGGAGGGCG...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACGGGCCCGGGGGTGTCTaGTGGCATCGTCATCTCGGT +
Preference number: 2 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYGPGGV*WHRHLG
Trigger: ACCGAGATGACGATGCCAGCAGACACCCCCGGGCCC...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCTTCCCAGAGTGCCTaGCCCTCAAACCCGCGCATG +
Preference number: 2 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCPSQSA*PSNPRM
Trigger: CATGCGCGGGTTTGAGGGGCAGGCACTCTGGGAAGG...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACGCATTGGGCGGTTCATaGACCCAGGGTGGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDALGGS*TQGGRG
Trigger: CCCACGCCCACCCTGGGTGCATGAACCGCCCAATGC...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCCCGGGGGTGTCTGCTaGCATCGTCATCTCGGTTGC +
Preference number: 2 (lower is better)
Translates to: EKGEPDLERVPLARSLPPPGGVC*HRHLGC
Trigger: GCAACCGAGATGACGATGCCAGCAGACACCCCCGGG...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCGCAGAGGGAGGGAGGTaGCTAATTCCGTGGGACCCC +
Preference number: 2 (lower is better)
Translates to: EKGEPDLERVPLARSLPPAEGGR*LIPWDP
Trigger: GGGGTCCCACGGAATTAGCCACCTCCCTCCCTCTGC...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGGCTAAGGGAGCTGTCTaGACAAAAGGTGTCTTGATC +
Preference number: 2 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPAKGAV*TKGVLI
Trigger: GATCAAGACACCTTTTGTCCAGACAGCTCCCTTAGC...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR CCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGGGGAGGGGCTGGGTaGAATGCATGTGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGWGGAG*NACGSS
Trigger: GCTGCTCCCACATGCATTCCACCCAGCCCCTCCCCA...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR TCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTCACCCCCAGCTCCTTTaGCCTTCTTCCCGGTCACCC +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPHPQLL*PSSRSP
Trigger: GGGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTG...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCTGGCGGCTTATTGCTaGGGTGGACTTGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCLAAYC*GGLGVG
Trigger: CCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAG...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACAATTCTCCTAAAGGCTaGGGGAGCAGGTCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYNSPKG*GSRSKA
Trigger: GGCTTTGGACCTGCTCCCTCAGCCTTTAGGAGAATT...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACAAACACTGGTGTCTGTaGAGAGGGTACCTTTGGGGC +
Preference number: 2 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYKHWCL*RGYLWG
Trigger: GCCCCAAAGGTACCCTCTTCACAGACACCAGTGTTT...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAGCGAGCGTGACGCGGTaGGGACCGCTGGGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: PWNCRQVAPILEVLASREASVTR*GPLGKG
Trigger: CCCCTTCCCCAGCGGTCCTCACCGCGTCACGCTCGC...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATCGAATCCCACACTATTaGCTTGGGGGATGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNRIPHY*LGGWGG
Trigger: CCCACCCCATCCCCCAAGTCAATAGTGTGGGATTCG...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGGGCCCGGGGGTGTCTaGTGGCATCGTCATCTCGGT +
Preference number: 2 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHGPGGV*WHRHLG
Trigger: ACCGAGATGACGATGCCAGCAGACACCCCCGGGCCC...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACAGGGGCTGGGTGGAATaGATGTGGGAGCAGCCAGCG +
Preference number: 2 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDRGWVE*MWEQPA
Trigger: CGCTGGCTGCTCCCACATGCATTCCACCCAGCCCCT...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR CCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGGGGAGCGCTAAAGGATaGAGGGCAGGGTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: GMEGDSRGISCARARSSQGSAKG*RAGSGE
Trigger: CTCCCCCGACCCTGCCCTCCATCCTTTAGCGCTCCC...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATGGCTTATTGCTGAGGTaGACTTGGAGTGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNGLLLR*TWSGGS
Trigger: GGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCC...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGCTCCGATCTGGGGCTTaGGTAACTGTTCCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRLRSGA*VTVPPS
Trigger: GGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAG...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGGGGGATTGGGAGATGTaGCGTGCCAGGGTCAGTCTC +
Preference number: 2 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGGDWEM*RARVSL
Trigger: GAGACTGACCCTGGCACGCCACATCTCCCAATCCCC...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
60% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGAGTGGGGAGGGAGGGTaGTTCAGGGAGCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGSGEGG*FREPLC
Trigger: ACACAGAGGCTCCCTGAACCACCCTCCCTCCCCACT...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTAGTCTGGGACCGGTGTaGTCTCTGGGCTTGGGGGAG +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPSLGPV*SLGLGE
Trigger: CTCCCCCAAGCCCAGAGACCACACCGGTCCCAGACT...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTGGGGAAGCACGAAGATaGGGTGCAGGGAAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCGEARR*GAGKGQ
Trigger: CTGACCCTTCCCTGCACCCCATCTTCGTGCTTCCCC...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR CAA 90 bp GGGAGCCTCTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATaGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: GSLCVQRLSRRSVWG*GDVACQGQSQNSGC
Trigger: GCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAGAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCTGGCGGCTTATTGCTaGGGTGGACTTGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVLAAYC*GGLGVG
Trigger: CCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAG...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAATTCCACCCGCGAGCGTaGCGCGGTGAGGACCGCTGG +
Preference number: 2 (lower is better)
Translates to: PWNCRQVAPILEVLASREFHPRA*RGEDRW
Trigger: CCAGCGGTCCTCACCGCGTCACGCTCGCGGGTGGAA...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCCCTTCCCAGAGTGCCTaGCCCTCAAACCCGCGCATG +
Preference number: 2 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLPSQSA*PSNPRM
Trigger: CATGCGCGGGTTTGAGGGGCAGGCACTCTGGGAAGG...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGGGAGGTCTGAGTCCATaGAGCAAGAATAGAGGCGAG +
Preference number: 2 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRGGLSP*SKNRGE
Trigger: CTCGCCTCTATTCTTGCTGCATGGACTCAGACCTCC...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCTGCCTGCAGGGTTCTaGACCCCCGCAGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHLPAGF*TPAGSS
Trigger: AGAGCTCCCTGCGGGGGTGCAGAACCCTGCAGGCAG...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR CCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATCCCGGGGGTGTCTGCTaGCATCGTCATCTCGGTTGC +
Preference number: 2 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHPGGVC*HRHLGC
Trigger: GCAACCGAGATGACGATGCCAGCAGACACCCCCGGG...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCAGGGCTTTGGGGATATaGGTGCGGAACAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: EKGEPDLERVPLARSLPPRALGI*VRNRPE
Trigger: CTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATTGCTTGGGGAGGGTCTaGTTCCCTGGAATTGCAGAC +
Preference number: 2 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNCLGRV*FPGIAD
Trigger: GTCTGCAATTCCAGGGAACCAGACCCTCCCCAAGCA...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCAAAGCTGGGTACGTGTaGCGGACTGGCGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLKAGYV*RTGEQG
Trigger: CCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTT...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CAA 90 bp GTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTaGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: VLASREPGLDKSVRA*GIWVRNRPEALGVS
Trigger: GGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCTTCCCAGAGTGCCTaGCCCTCAAACCCGCGCATG +
Preference number: 2 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHPSQSA*PSNPRM
Trigger: CATGCGCGGGTTTGAGGGGCAGGCACTCTGGGAAGG...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGCCTTCCCAGAGTGCCTaGCCCTCAAACCCGCGCATG +
Preference number: 2 (lower is better)
Translates to: CRQVAPILEVLASREPGLPSQSA*PSNPRM
Trigger: CATGCGCGGGTTTGAGGGGCAGGCACTCTGGGAAGG...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCAAGGCATGCAGTGTGTaGGGGGAGGTGCCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: EMWRARVSLRILGAGLMSKACSV*GEVPQD
Trigger: ATCTTGGGGCACCTCCCCCCACACACTGCATGCCTT...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGATCAACGCACAGGGTTaGTTGTCCTCCTGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: RALGIWVRNRPEALGVSKINAQG*LSSWGE
Trigger: TTCACCCCAGGAGGACAACCAACCCTGTGCGTTGAT...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAAGTCGCAGGAGTGTGTaGGGATTGGGAGATGTGGCG +
Preference number: 2 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKSRRSV*GLGDVA
Trigger: CGCCACATCTCCCAATCCCCACACACTCCTGCGACT...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACGGATCCCAGCCGAGCTaGGTGTTGTCGGTTCCCAAT +
Preference number: 2 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDGSQPS*VLSVPN
Trigger: ATTGGGAACCGACAACACCCAGCTCGGCTGGGATCC...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCAGCAGGGGGAGACGTTaGGAAGAGGTCAGTACCCTT +
Preference number: 2 (lower is better)
Translates to: EKGEPDLERVPLARSLPPSRGRR*EEVSTL
Trigger: AAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCT...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTGCAAGGGGGCTGAGTaGAGCGAAGCTGGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQCKGAE*SEAGSA
Trigger: GGCACTGCCAGCTTCGCTCCACTCAGCCCCCTTGCA...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR TCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGGGGGAAGGGGCGGATaGGAGGGTGAAATTCACCAG +
Preference number: 2 (lower is better)
Translates to: CRQVAPILEVLASREPGLGGRGG*EGEIHQ
Trigger: CTGGTGAATTTCACCCTCTCATCCGCCCCTTCCCCC...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGGGGGGAAGGGGCGGATaGGAGGGTGAAATTCACCAG +
Preference number: 2 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQGGRGG*EGEIHQ
Trigger: CTGGTGAATTTCACCCTCTCATCCGCCCCTTCCCCC...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTGGTGCGGAACAGGCCTaGGGCTTTGGGGGTGTCCAA +
Preference number: 2 (lower is better)
Translates to: APILEVLASREPGLDKSVGAEQA*GFGGVQ
Trigger: TTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACC...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCTTGGGAGATGTGGCGTaGCAGGGTCAGTCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: EKGEPDLERVPLARSLPPLGDVA*QGQSQN
Trigger: ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGTTGGGAGATGTGGCGTaGCAGGGTCAGTCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGLGDVA*QGQSQN
Trigger: ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACACCTGGCCCGTGTCCGTaGGTTCCCGGAGCGCAGGAG +
Preference number: 2 (lower is better)
Translates to: QAAMPALIGFCTKCVLETPGPCP*VPGAQE
Trigger: CTCCTGCGCTCCGGGAACGCACGGACACGGGCCAGG...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGAAGGCATGCAGTGTGTaGGGGGAGGTGCCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: DKSVRALGIWVRNRPEALKACSV*GEVPQD
Trigger: ATCTTGGGGCACCTCCCCCCACACACTGCATGCCTT...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGAGGTGGACTTGGAGTaGGGGCTCCAGGTTAGGGAA +
Preference number: 2 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHEVDLE*GLQVRE
Trigger: TTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGTTGCTGAGGTGGACTTaGAGTGGGGGCTCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVLLRWT*SGGSRL
Trigger: TAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAA...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCATCAACGCACAGGGTTaGTTGTCCTCCTGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: EKGEPDLERVPLARSLPPINAQG*LSSWGE
Trigger: TTCACCCCAGGAGGACAACCAACCCTGTGCGTTGAT...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTCTCCGATCTGGGGCTTaGGTAACTGTTCCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPLRSGA*VTVPPS
Trigger: GGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAG...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGAGCTCAACTCCGATCTaGGGCTTGGGTAACTGTTCC +
Preference number: 2 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGSSTPI*GLGNCS
Trigger: GGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCT...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGAGTCGCAGGAGTGTGTaGGGATTGGGAGATGTGGCG +
Preference number: 2 (lower is better)
Translates to: GMEGDSRGISCARARSSQSRRSV*GLGDVA
Trigger: CGCCACATCTCCCAATCCCCACACACTCCTGCGACT...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGAGTGGGGAGGGAGGGTaGTTCAGGGAGCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQSGEGG*FREPLC
Trigger: ACACAGAGGCTCCCTGAACCACCCTCCCTCCCCACT...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGAGGGTCTGGTTCCCTaGAATTGCAGACAGGTTGCG +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPEGLVP*NCRQVA
Trigger: CGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCGGCCCGCGATGCTGCTaGGGCTGCGGGATTTCTCGT +
Preference number: 2 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTGPRCC*GCGISR
Trigger: ACGAGAAATCCCGCAGCCTCAGCAGCATCGCGGGCC...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCCGCCCTCCCGCCACCTaGGCTCAACTCCGATCTGGG +
Preference number: 2 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIRPPAT*AQLRSG
Trigger: CCCAGATCGGAGTTGAGCTCAGGTGGCGGGAGGGCG...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGCGCCCTCCCACCACCTaGGCTCAACTCGGCCCCGCC +
Preference number: 2 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGRPPTT*AQLGPA
Trigger: GGCGGGGCCGAGTTGAGCTCAGGTGGTGGGAGGGCG...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTAATTCTCCTAAAGGCTaGGGGAGCAGGTCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPNSPKG*GSRSKA
Trigger: GGCTTTGGACCTGCTCCCTCAGCCTTTAGGAGAATT...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAACAAGTCTTGGAGGTTTaGGAAGTGCTGGGACGCAGT +
Preference number: 2 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKQVLEV*EVLGRS
Trigger: ACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTG...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTATAGGAGGTGGGAAATaGTTTTCCACCCGCGAGCGT +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPIGGGK*FSTRER
Trigger: ACGCTCGCGGGTGGAAAATCATTTCCCACCTCCTAT...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTCTCCTTCGGCTTTCGTaGAGGTCAGGGGAAACGGGG +
Preference number: 2 (lower is better)
Translates to: APILEVLASREPGLDKSVLLRLS*RSGETG
Trigger: CCCCGTTTCCCCTGACCTTCACGAAAGCCGAAGGAG...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTAGCGGGGCTGGGGGCTaGCCTAGTTGTAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFSGAGG*PSCRER
Trigger: TCTTTCCCTACAACTAGGTCAGCCCCCAGCCCCGCT...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR GCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTCAAACCCGCGCATaGGGCCCCTGGCGGCTTATT +
Preference number: 2 (lower is better)
Translates to: PWNCRQVAPILEVLASREPQTRA*GPWRLI
Trigger: AATAAGCCGCCAGGGGCCGCATGCGCGGGTTTGAGG...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGCTTTGGGGATATGGGTaGGGAACAGGCCTGAGGCTT +
Preference number: 2 (lower is better)
Translates to: GMEGDSRGISCARARSSQLWGYG*GTGLRL
Trigger: AAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAG...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTCCAAGCAGCGATGCCTaGACTTATCGGCTTCTGTAC +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPPSSDA*TYRLLY
Trigger: GTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTGG...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATGGTTGGTTGTCCTCCTaGGGTGAAGGATGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHGWLSS*GEGWEG
Trigger: GCCTTCCCATCCTTCACCCCAGGAGGACAACCAACC...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGTCATCCCAGGAATTCTaGGATAGGAGGTCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGSSQEF*DRRSES
Trigger: GGACTCAGACCTCCTATCCCAGAATTCCTGGGATGA...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGAGTCGCAGGAGTGTGTaGGGATTGGGAGATGTGGCG +
Preference number: 2 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQSRRSV*GLGDVA
Trigger: CGCCACATCTCCCAATCCCCACACACTCCTGCGACT...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAGGTTTGAGAAGTGCTaGGACGCAGTTCAGGGAATT +
Preference number: 2 (lower is better)
Translates to: RALGIWVRNRPEALGVSKRFEKC*DAVQGI
Trigger: AATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCT...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGGTTGTGGGAAGGATTTaGAGCATCCCAAAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: RALGIWVRNRPEALGVSKVVGRI*SIPKAE
Trigger: TTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAAC...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGAGGGCTTTGGGGATATaGGTGCGGAACAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: CRQVAPILEVLASREPGLRALGI*VRNRPE
Trigger: CTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCAGTCTGTTAGGGCTTTaGGGATATGGGTGCGGAACA +
Preference number: 2 (lower is better)
Translates to: EKGEPDLERVPLARSLPPSLLGL*GYGCGT
Trigger: TGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGGGATCCCAGCCGAGCTaGGTGTTGTCGGTTCCCAAT +
Preference number: 2 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQGSQPS*VLSVPN
Trigger: ATTGGGAACCGACAACACCCAGCTCGGCTGGGATCC...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CAA 90 bp GGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTaGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTT +
Preference number: 2 (lower is better)
Translates to: GEGLVPWNCRQVAPI*EVLASREPGLDKSV
Trigger: AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGCTTATTTACACAAGTTaGTGGCAGGGGGATGTCCTA +
Preference number: 2 (lower is better)
Translates to: RALGIWVRNRPEALGVSKLIYTS*WQGDVL
Trigger: TAGGACATCCCCCTGCCATCAACTTGTGTAAATAAG...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCAATTCTCCTAAAGGCTaGGGGAGCAGGTCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLNSPKG*GSRSKA
Trigger: GGCTTTGGACCTGCTCCCTCAGCCTTTAGGAGAATT...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCATAGGAGGTGGGAAATaGTTTTCCACCCGCGAGCGT +
Preference number: 2 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLIGGGK*FSTRER
Trigger: ACGCTCGCGGGTGGAAAATCATTTCCCACCTCCTAT...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCCGCCCACATTTGAGTaGGAGAAACTTATTGCTCTG +
Preference number: 2 (lower is better)
Translates to: EKGEPDLERVPLARSLPPPPTFE*EKLIAL
Trigger: CAGAGCAATAAGTTTCTCTCACTCAAATGTGGGCGG...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAGGGCCCGGGGGTGTCTaGTGGCATCGTCATCTCGGT +
Preference number: 2 (lower is better)
Translates to: QAAMPALIGFCTKCVLETGPGGV*WHRHLG
Trigger: ACCGAGATGACGATGCCAGCAGACACCCCCGGGCCC...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAATGGAGGTTTGAGAAGTaGTGGGACGCAGTTCAGGGA +
Preference number: 2 (lower is better)
Translates to: LGEGLVPWNCRQVAPILEWRFEK*WDAVQG
Trigger: TCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCA...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGCTAGCCAAGCAGCGATaGCTGCACTTATCGGCTTCT +
Preference number: 2 (lower is better)
Translates to: DKSVRALGIWVRNRPEALLAKQR*LHLSAS
Trigger: AGAAGCCGATAAGTGCAGGCATCGCTGCTTGGCTAG...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCGGGAGCGCTAAAGGATaGAGGGCAGGGTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIGSAKG*RAGSGE
Trigger: CTCCCCCGACCCTGCCCTCCATCCTTTAGCGCTCCC...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGTCATCCCAGGAATTCTaGGATAGGAGGTCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVSSQEF*DRRSES
Trigger: GGACTCAGACCTCCTATCCCAGAATTCCTGGGATGA...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGACAGGCCTGAGGCTTTaGGGGTGTCCAAGAAATGTC +
Preference number: 2 (lower is better)
Translates to: GMEGDSRGISCARARSSQTGLRL*GCPRNV
Trigger: GACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGT...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGTGGCTAATTCCGTaGGACCCCGGCTCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: APILEVLASREPGLDKSVRWLIP*DPGSKR
Trigger: CCTTTTGGAGCCGGGGTCCCACGGAATTAGCCACCT...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTTGGGTGGAATGCATGTaGGAGCAGCCAGCGGAGAGG +
Preference number: 2 (lower is better)
Translates to: ARGCLLASSSRLHIINDFWVECM*EQPAER
Trigger: CCTCTCCGCTGGCTGCTCCCACATGCATTCCACCCA...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR TCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACACACCCCCAGCTCCTTTaGCCTTCTTCCCGGTCACCC +
Preference number: 2 (lower is better)
Translates to: QAAMPALIGFCTKCVLETHPQLL*PSSRSP
Trigger: GGGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTG...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCTTATTTACACAAGTTaGTGGCAGGGGGATGTCCTA +
Preference number: 2 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCLIYTS*WQGDVL
Trigger: TAGGACATCCCCCTGCCATCAACTTGTGTAAATAAG...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTAGGCTGAATTTGAGCTaGAAAGAGCTGGGTCAAGTC +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPRLNLS*KELGQV
Trigger: GACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCT...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTCCTTGGGGAATCCGATaGGAACTCCAGGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: ARGCLLASSSRLHIINDFPWGIR*ELQEQW
Trigger: CCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGG...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR GCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGGGAGGTCTGAGTCCATaGAGCAAGAATAGAGGCGAG +
Preference number: 2 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQGGLSP*SKNRGE
Trigger: CTCGCCTCTATTCTTGCTGCATGGACTCAGACCTCC...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGGGAGGTCTGAGTCCATaGAGCAAGAATAGAGGCGAG +
Preference number: 2 (lower is better)
Translates to: LASREPGLDKSVRALGIWGGLSP*SKNRGE
Trigger: CTCGCCTCTATTCTTGCTGCATGGACTCAGACCTCC...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAATCTCAGAATTCTGGGTaGAGGTCTCATGTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: LGEGLVPWNCRQVAPILESQNSG*RSHVLG
Trigger: TCCCAGGACATGAGACCTGCACCCAGAATTCTGAGA...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR GCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGTCTCAGAATTCTGGGTaGAGGTCTCATGTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: DKSVRALGIWVRNRPEALSQNSG*RSHVLG
Trigger: TCCCAGGACATGAGACCTGCACCCAGAATTCTGAGA...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGTGTGTGTGGTTTCTaGAAAGCCTGGGGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: APILEVLASREPGLDKSVSVCGF*KAWGCL
Trigger: CAGGCAGCCCCAGGCTTTGCAGAAACCACACACACT...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR CCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAAAGGCATGCAGTGTGTaGGGGGAGGTGCCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: PWNCRQVAPILEVLASREKACSV*GEVPQD
Trigger: ATCTTGGGGCACCTCCCCCCACACACTGCATGCCTT...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTGGTTGGTTGTCCTCCTaGGGTGAAGGATGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: ARGCLLASSSRLHIINDFGWLSS*GEGWEG
Trigger: GCCTTCCCATCCTTCACCCCAGGAGGACAACCAACC...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATAGCTCAACTCCGATCTaGGGCTTGGGTAACTGTTCC +
Preference number: 2 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHSSTPI*GLGNCS
Trigger: GGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCT...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGAGCCAGGATAGGAGGTaGGAAATGATTTTCCACCCG +
Preference number: 2 (lower is better)
Translates to: GMEGDSRGISCARARSSQSQDRR*EMIFHP
Trigger: CGGGTGGAAAATCATTTCCCACCTCCTATCCTGGCT...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR TCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCTTATTTACACAAGTTaGTGGCAGGGGGATGTCCTA +
Preference number: 2 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVLIYTS*WQGDVL
Trigger: TAGGACATCCCCCTGCCATCAACTTGTGTAAATAAG...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTCCAAGCAGCGATGCCTaGACTTATCGGCTTCTGTAC +
Preference number: 2 (lower is better)
Translates to: APILEVLASREPGLDKSVPSSDA*TYRLLY
Trigger: GTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTGG...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCGGCTTATTGCTGAGGTaGACTTGGAGTGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTGLLLR*TWSGGS
Trigger: GGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCC...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCGGTTGGTTGTCCTCCTaGGGTGAAGGATGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTGWLSS*GEGWEG
Trigger: GCCTTCCCATCCTTCACCCCAGGAGGACAACCAACC...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCGGGGATTGGGAGATGTaGCGTGCCAGGGTCAGTCTC +
Preference number: 2 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIGDWEM*RARVSL
Trigger: GAGACTGACCCTGGCACGCCACATCTCCCAATCCCC...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCAGGGCTTTGGGGATATaGGTGCGGAACAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTRALGI*VRNRPE
Trigger: CTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTACAAATACAACCCTCTaGGAAACACTGGTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPTNTTL*ETLVSV
Trigger: CACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGT...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCGAGGTGGACTTGGAGTaGGGGCTCCAGGTTAGGGAA +
Preference number: 2 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIEVDLE*GLQVRE
Trigger: TTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAGAGGTGGACTTGGAGTaGGGGCTCCAGGTTAGGGAA +
Preference number: 2 (lower is better)
Translates to: QAAMPALIGFCTKCVLETEVDLE*GLQVRE
Trigger: TTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCAGTCGCAGGAGTGTGTaGGGATTGGGAGATGTGGCG +
Preference number: 2 (lower is better)
Translates to: TLNLNKPCPSQAAMPALISRRSV*GLGDVA
Trigger: CGCCACATCTCCCAATCCCCACACACTCCTGCGACT...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCGTTCAGGGAATTTGGTaGGGGTGTTTGGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTVQGIW*GCLGWQ
Trigger: CTGCCACCCCAAACACCCCCACCAAATTCCCTGAAC...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCGGTTTCTGCAAAGCCTaGGGCTGCCTGCAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIGFCKA*GCLQGS
Trigger: AGAACCCTGCAGGCAGCCCCAGGCTTTGCAGAAACC...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR CAA 90 bp AAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTaGAGAAGTGCTGGGACGCAGTTCAGGGAATTTGGTGGGGGTGTT +
Preference number: 2 (lower is better)
Translates to: KAEFELKRAGSSLGG*RSAGTQFREFGGGV
Trigger: AACACCCCCACCAAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR TCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGCTGGCGGCTTATTGCTaGGGTGGACTTGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGLAAYC*GGLGVG
Trigger: CCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAG...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTTCTCAGAATTCTGGGTaGAGGTCTCATGTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: ARGCLLASSSRLHIINDFSQNSG*RSHVLG
Trigger: TCCCAGGACATGAGACCTGCACCCAGAATTCTGAGA...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGGTTGGTTGTCCTCCTaGGGTGAAGGATGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRGWLSS*GEGWEG
Trigger: GCCTTCCCATCCTTCACCCCAGGAGGACAACCAACC...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCACAGGCCTGAGGCTTTaGGGGTGTCCAAGAAATGTC +
Preference number: 2 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTTGLRL*GCPRNV
Trigger: GACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGT...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGGATTTCTCGTAACCTaGGGGGTGGGGAGGTGTGCA +
Preference number: 2 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRGFLVT*GVGRCA
Trigger: TGCACACCTCCCCACCCCCCAGGTTACGAGAAATCC...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR CAA 90 bp GTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTaGATGGCAGGGGGATGTCCTATGGCTCGTGGAGACCTGAGAAGG +
Preference number: 2 (lower is better)
Translates to: VPQDVTGIIWTYLHK*MAGGCPMARGDLRR
Trigger: CCTTCTCAGGTCTCCACGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACATTGGGAGATGTGGCGTaGCAGGGTCAGTCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: QAAMPALIGFCTKCVLETLGDVA*QGQSQN
Trigger: ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGGCCCCAAGATGTAACTaGCATAATTTGGACTTATTT +
Preference number: 2 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVAPRCN*HNLDLF
Trigger: AAATAAGTCCAAATTATGCCAGTTACATCTTGGGGC...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGATTGCTGAGGTGGACTTaGAGTGGGGGCTCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRLLRWT*SGGSRL
Trigger: TAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAA...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTTTGCTGAGGTGGACTTaGAGTGGGGGCTCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLLLRWT*SGGSRL
Trigger: TAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAA...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGTTCAGGGAATTTGGTaGGGGTGTTTGGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRVQGIW*GCLGWQ
Trigger: CTGCCACCCCAAACACCCCCACCAAATTCCCTGAAC...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTGTTGTGGGAAGGATTTaGAGCATCCCAAAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: ARGCLLASSSRLHIINDFVVGRI*SIPKAE
Trigger: TTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAAC...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGATGGAGGTTTGAGAAGTaGTGGGACGCAGTTCAGGGA +
Preference number: 2 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRWRFEK*WDAVQG
Trigger: TCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCA...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR GCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGGCTTCTGTACAAAATaGGTATTAGAGACAAAACTT +
Preference number: 2 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPGFCTK*VLETKL
Trigger: AAGTTTTGTCTCTAATACGCATTTTGTACAGAAGCC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGCCCCAAGATGTAACTaGCATAATTTGGACTTATTT +
Preference number: 2 (lower is better)
Translates to: DKSVRALGIWVRNRPEALAPRCN*HNLDLF
Trigger: AAATAAGTCCAAATTATGCCAGTTACATCTTGGGGC...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGCCCCAAGATGTAACTaGCATAATTTGGACTTATTT +
Preference number: 2 (lower is better)
Translates to: LGEGLVPWNCRQVAPILEAPRCN*HNLDLF
Trigger: AAATAAGTCCAAATTATGCCAGTTACATCTTGGGGC...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGACTCATGTCCTGGGAATaGAGGGAGATAGTCGGGGAA +
Preference number: 2 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRLMSWE*REIVGE
Trigger: TTCCCCGACTATCTCCCTCCATTCCCAGGACATGAG...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCGTTGTGGGAAGGATTTaGAGCATCCCAAAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTVVGRI*SIPKAE
Trigger: TTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAAC...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGCTCTGTGATCATCTGTaGACTACTTTAAATGGAAAC +
Preference number: 2 (lower is better)
Translates to: DKSVRALGIWVRNRPEALLCDHL*TTLNGN
Trigger: GTTTCCATTTAAAGTAGTCCACAGATGATCACAGAG...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTAAAGCTGGGTACGTGTaGCGGACTGGCGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPKAGYV*RTGEQG
Trigger: CCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGCTCATGTCCTGGGAATaGAGGGAGATAGTCGGGGAA +
Preference number: 2 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGLMSWE*REIVGE
Trigger: TTCCCCGACTATCTCCCTCCATTCCCAGGACATGAG...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGTCATCCCAGGAATTCTaGGATAGGAGGTCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGSSQEF*DRRSES
Trigger: GGACTCAGACCTCCTATCCCAGAATTCCTGGGATGA...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAAGGTTTGAGAAGTGCTaGGACGCAGTTCAGGGAATT +
Preference number: 2 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRRFEKC*DAVQGI
Trigger: AATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCT...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTCTCTGTGATCATCTGTaGACTACTTTAAATGGAAAC +
Preference number: 2 (lower is better)
Translates to: APILEVLASREPGLDKSVLCDHL*TTLNGN
Trigger: GTTTCCATTTAAAGTAGTCCACAGATGATCACAGAG...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATCAGCAACAGTGTGTGTaGTTTCTGCAAAGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDQQQCV*FLQSLG
Trigger: CCCCAGGCTTTGCAGAAACCACACACACTGTTGCTG...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR CCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCAAGAAATGTCAGTTGTaGGAAGGATTTGGAGCATCC +
Preference number: 2 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIKKCQL*EGFGAS
Trigger: GGATGCTCCAAATCCTTCCCACAACTGACATTTCTT...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGCTGAACTCAAAAGCTaGGTACGTGTGGCGGACTGG +
Preference number: 2 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPAELKS*VRVADW
Trigger: CCAGTCCGCCACACGTACCCAGCTTTTGAGTTCAGC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTAGCTCAACTCCGATCTaGGGCTTGGGTAACTGTTCC +
Preference number: 2 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPSSTPI*GLGNCS
Trigger: GGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTAGTCTGTTAGGGCTTTaGGGATATGGGTGCGGAACA +
Preference number: 2 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPSLLGL*GYGCGT
Trigger: TGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CCA 72 bp GCGTTCCCGGAGCGCAGGAGGGGTGCGACATGCGTGTaGGGGGCGCGTCATGCAGCGCATGCGTGTAGGTGC +
Preference number: 3 (lower is better)
Translates to: AFPERRRGATCV*GARHAAHACRC
Trigger: GCACCTACACGCATGCGCTGCATGACGCGCCCCCCACACGCATGTCGCACCCCTCCTGCGCTCCGGGAACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR TCA 72 bp CACGCCGACCCCTCCCTCCCTGCCCTGCGGGTGGGCTaGGAAGACCCGCCATTAGCACCAGAGTTGGACGAT +
Preference number: 3 (lower is better)
Translates to: HADPSLPALRVG*EDPPLAPELDD
Trigger: ATCGTCCAACTCTGGTGCTAATGGCGGGTCTTCTCAGCCCACCCGCAGGGCAGGGAGGGAGGGGTCGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CCA 72 bp CCCGCGCATGCGGCCCCTGGCGGCTTATTGCTGAGGTaGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: PAHAAPGGLLLR*TWSGGSRLGKA
Trigger: TGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGCCGCATGCGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 72 bp AGAGTGCCTGCCCCTCAAACCCGCGCATGCGGCCCCTaGCGGCTTATTGCTGAGGTGGACTTGGAGTGGGGG +
Preference number: 3 (lower is better)
Translates to: RVPAPQTRACGP*RLIAEVDLEWG
Trigger: CCCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGCCGCATGCGCGGGTTTGAGGGGCAGGCACTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 72 bp GCCCCGCCCTCCCGCCACCTGAGCTCAACTCCGATCTaGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACT +
Preference number: 3 (lower is better)
Translates to: APPSRHLSSTPI*GLGNCSSFPYT
Trigger: AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCGGGAGGGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACGCCCCTGGCGGCTTATaGCTGAGGTGGACTTGGAGT +
Preference number: 3 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYAPGGL*LRWTWS
Trigger: ACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGC...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACATTGCTGAGGTGGACTaGGAGTGGGGGCTCCAGGTT +
Preference number: 3 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYIAEVD*EWGLQV
Trigger: AACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAAT...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTTGAAGCCCAGTGTCTaGGGGACACCCCCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPLKPSV*GTPPPS
Trigger: GCTGGGAGGGGGTGTCCCCAAGACACTGGGCTTCAA...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR GCA 72 bp AGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTaGCTGCAGGGTTCTGCACCCCCGCAGGGAGCTCTG +
Preference number: 3 (lower is better)
Translates to: SNSVCGFCKAWG*LQGSAPPQGAL
Trigger: CAGAGCTCCCTGCGGGGGTGCAGAACCCTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR CCA 72 bp CATGCGGCCCCTGGCGGCTTATTGCTGAGGTGGACTTaGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGT +
Preference number: 3 (lower is better)
Translates to: HAAPGGLLLRWT*SGGSRLGKACS
Trigger: ACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGCCGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATCCACCCCCAGCTCCTTaGACCTTCTTCCCGGTCACC +
Preference number: 3 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNPPPAP*TFFPVT
Trigger: GGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTGG...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 72 bp CCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATaGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCC +
Preference number: 3 (lower is better)
Translates to: PGLDKSVRALGI*VRNRPEALGVS
Trigger: GGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 72 bp AGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTaGGGCTGCCTGCAGGGTTCTGCACCCCCGCAGGGA +
Preference number: 3 (lower is better)
Translates to: RSSNSVCGFCKA*GCLQGSAPPQG
Trigger: TCCCTGCGGGGGTGCAGAACCCTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR-3UTR CAA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCGCCCCTGGCGGCTTATaGCTGAGGTGGACTTGGAGT +
Preference number: 3 (lower is better)
Translates to: EKGEPDLERVPLARSLPPAPGGL*LRWTWS
Trigger: ACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGC...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGTGTGGTCTCTGGGCTaGGGGGAGGTAGCGCATCCT +
Preference number: 3 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPVWSLG*GEVAHP
Trigger: AGGATGCGCTACCTCCCCCAAGCCCAGAGACCACAC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CCA 72 bp GGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTaGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTCA +
Preference number: 3 (lower is better)
Translates to: GTCGGLASRGRR*EEVSTLWKRPS
Trigger: TGAGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGCCACCCCCAGCTCCTTaGACCTTCTTCCCGGTCACC +
Preference number: 3 (lower is better)
Translates to: GMEGDSRGISCARARSSQPPPAP*TFFPVT
Trigger: GGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTGG...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATAACGCACAGGGTTGGTaGTCCTCCTGGGGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNNAQGW*SSWGEG
Trigger: TCCTTCACCCCAGGAGGACAACCAACCCTGTGCGTT...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGCGCAGTTCAGGGAATTaGGTGGGGGTGTTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGRSSGN*VGVFGV
Trigger: CACCCCAAACACCCCCACCAAATTCCCTGAACTGCG...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATAGAGGTCAGTACCCTTaGGAAAAGACCCTCACCCCC +
Preference number: 3 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNRGQYP*EKTLTP
Trigger: GGGGGTGAGGGTCTTTTCCAAAGGGTACTGACCTCT...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCGTGTGTGTGTGTGTGTaGGGGAGGGTGAGCCGCGGA +
Preference number: 3 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLVCVCV*GRVSRG
Trigger: TCCGCGGCTCACCCTCCCCAACACACACACACACAC...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGCCACCCCCAGCTCCTTaGACCTTCTTCCCGGTCACC +
Preference number: 3 (lower is better)
Translates to: CRQVAPILEVLASREPGLPPPAP*TFFPVT
Trigger: GGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTGG...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACATTGCTGAGGTGGACTaGGAGTGGGGGCTCCAGGTT +
Preference number: 3 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDIAEVD*EWGLQV
Trigger: AACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAAT...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAAACGCACAGGGTTGGTaGTCCTCCTGGGGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKNAQGW*SSWGEG
Trigger: TCCTTCACCCCAGGAGGACAACCAACCCTGTGCGTT...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATTCTGGTTCCCTGGAATaGCAGACAGGTTGCGCCTAT +
Preference number: 3 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNSGSLE*QTGCAY
Trigger: ATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGA...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR TCA 72 bp CCCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTaGTACTCCAGTGTTCCTCCCTTCGGGAACAGCCTC +
Preference number: 3 (lower is better)
Translates to: PSRAGCCRFPIF*YSSVPPFGNSL
Trigger: GAGGCTGTTCCCGAAGGGAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR TCA 72 bp GGGAGAGGGACATCTTTAAAGGGTCCAAGAAGGCTCTaGGCTTCTGACGGGTGCGGGAAGGCTCTCACAGGC +
Preference number: 3 (lower is better)
Translates to: GRGTSLKGPRRL*ASDGCGKALTG
Trigger: GCCTGTGAGAGCCTTCCCGCACCCGTCAGAAGCTCAGAGCCTTCTTGGACCCTTTAAAGATGTCCCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR GCA 72 bp AGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTaGCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: SRRSVWGLGDVA*QGQSQNSGCRS
Trigger: AGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR GCA 72 bp GGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGGTaGGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGA +
Preference number: 3 (lower is better)
Translates to: GWTSLLGLWGYG*GTGLRLWGCPR
Trigger: TCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR GCA 72 bp TGGGACTCAAGATCCAGCAACAGTGTGTGTGGTTTCTaGAAAGCCTGGGGCTGCCTGCAGGGTTCTGCACCC +
Preference number: 3 (lower is better)
Translates to: WDSRSSNSVCGF*KAWGCLQGSAP
Trigger: GGGTGCAGAACCCTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGAGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR CCA 72 bp AGCCTCTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTaGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCT +
Preference number: 3 (lower is better)
Translates to: SLCVQRLSRRSV*GLGDVACQGQS
Trigger: AGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGGCCCCTGGCGGCTTATaGCTGAGGTGGACTTGGAGT +
Preference number: 3 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQAPGGL*LRWTWS
Trigger: ACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGC...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGAACGCACAGGGTTGGTaGTCCTCCTGGGGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWNAQGW*SSWGEG
Trigger: TCCTTCACCCCAGGAGGACAACCAACCCTGTGCGTT...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCTCAAGTCTTGGAGGTTaGAGAAGTGCTGGGACGCAG +
Preference number: 3 (lower is better)
Translates to: EKGEPDLERVPLARSLPPSSLGG*RSAGTQ
Trigger: CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGA...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGTCAAGTCTTGGAGGTTaGAGAAGTGCTGGGACGCAG +
Preference number: 3 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGSSLGG*RSAGTQ
Trigger: CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGA...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCCATTAGCACCAGAGTaGGACGATTTGCAGACCTCC +
Preference number: 3 (lower is better)
Translates to: EKGEPDLERVPLARSLPPPLAPE*DDLQTS
Trigger: GGAGGTCTGCAAATCGTCCAACTCTGGTGCTAATGG...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CCA 72 bp AAAGCTGAACTCAAAAGCTGGGTACGTGTGGCGGACTaGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTA +
Preference number: 3 (lower is better)
Translates to: KAELKSWVRVAD*RAGGDVGKRSV
Trigger: TACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTTGAGTTCAGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGATTGCTGAGGTGGACTaGGAGTGGGGGCTCCAGGTT +
Preference number: 3 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQIAEVD*EWGLQV
Trigger: AACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAAT...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACTCAAGTCTTGGAGGTTaGAGAAGTGCTGGGACGCAG +
Preference number: 3 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDSSLGG*RSAGTQ
Trigger: CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGA...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCAGGTTGCGCCTATCTaGGAAGTTCTAGCATCAAGG +
Preference number: 3 (lower is better)
Translates to: EKGEPDLERVPLARSLPPQVAPI*EVLASR
Trigger: CCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTG...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGGACAAAAGGTGTCTaGATCGTAGGAGGGAGGGCT +
Preference number: 3 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKWTKGV*IVGGRA
Trigger: AGCCCTCCCTCCTACGATCAAGACACCTTTTGTCCA...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR GCA 72 bp GATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTaGAGGTCTCATGTCCTGGGAATGGAGGGAGATAGT +
Preference number: 3 (lower is better)
Translates to: DVACQGQSQNSG*RSHVLGMEGDS
Trigger: ACTATCTCCCTCCATTCCCAGGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGAACAGGCCTGAGGCTTaGGGGGTGTCCAAGAAATGT +
Preference number: 3 (lower is better)
Translates to: GMEGDSRGISCARARSSQNRPEA*GVSKKC
Trigger: ACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTT...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAAAGTCTGTTAGGGCTTaGGGGATATGGGTGCGGAAC +
Preference number: 3 (lower is better)
Translates to: LGEGLVPWNCRQVAPILEKSVRA*GIWVRN
Trigger: GTTCCGCACCCATATCCCCAAAGCCCTAACAGACTT...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAGGAGGTAGCGCATCCTaGAGCCAGGATAGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: PWNCRQVAPILEVLASREGGSAS*SQDRRW
Trigger: CCACCTCCTATCCTGGCTCAAGGATGCGCTACCTCC...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCGACTCAAAATGCCCCTaGCATAGGAATCGTTGCATC +
Preference number: 3 (lower is better)
Translates to: EKGEPDLERVPLARSLPPDSKCP*HRNRCI
Trigger: GATGCAACGATTCCTATGCAAGGGGCATTTTGAGTC...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGAAGCTGGCAGTGCCCTaGGGGAATCCGATGAGAACT +
Preference number: 3 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQKLAVP*GNPMRT
Trigger: AGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTT...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR GCA 72 bp TGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTaGGCCTATCTTGGAAGTTCTAGCATCAAGGGAACC +
Preference number: 3 (lower is better)
Translates to: WGGSGSLELQTG*AYLGSSSIKGT
Trigger: GGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATACTTATTTACACAAGTaGATGGCAGGGGGATGTCCT +
Preference number: 3 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNTYLHK*MAGGCP
Trigger: AGGACATCCCCCTGCCATCAACTTGTGTAAATAAGT...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTATTGCTGAGGTGGACTaGGAGTGGGGGCTCCAGGTT +
Preference number: 3 (lower is better)
Translates to: ARGCLLASSSRLHIINDFIAEVD*EWGLQV
Trigger: AACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAAT...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTACTCCGATCTGGGGCTaGGGTAACTGTTCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFTPIWG*GNCSSF
Trigger: GAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGT...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTCGCAGTTCAGGGAATTaGGTGGGGGTGTTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: ARGCLLASSSRLHIINDFRSSGN*VGVFGV
Trigger: CACCCCAAACACCCCCACCAAATTCCCTGAACTGCG...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTGTGAAGAGGGTACCTTaGGGGCACCATCTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: APILEVLASREPGLDKSVVKRVP*GHHLRE
Trigger: TTCCCTGAGATGGTGCCCCAAAGGTACCCTCTTCAC...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATAGTGAGAGAAACTTATaGCTCTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNSERNL*LCVCVC
Trigger: ACACACACACACACAGAGCAATAAGTTTCTCTCACT...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CCA 72 bp GTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCTaGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTG +
Preference number: 3 (lower is better)
Translates to: VSLRILGAGLMS*EWREIVGEFRV
Trigger: CACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCTGCACCCAGAATTCTGAGACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGACCACCCCCAGCTCCTTaGACCTTCTTCCCGGTCACC +
Preference number: 3 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRPPPAP*TFFPVT
Trigger: GGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTGG...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGGCATCGTCATCTCGGTaGCATATTATTAATGACTTT +
Preference number: 3 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRASSSR*HIINDF
Trigger: AAAGTCATTAATAATATGCAACCGAGATGACGATGC...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATACTTATTTACACAAGTaGATGGCAGGGGGATGTCCT +
Preference number: 3 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHTYLHK*MAGGCP
Trigger: AGGACATCCCCCTGCCATCAACTTGTGTAAATAAGT...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTGCCCCTGGCGGCTTATaGCTGAGGTGGACTTGGAGT +
Preference number: 3 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLAPGGL*LRWTWS
Trigger: ACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGC...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAAACAGGCCTGAGGCTTaGGGGGTGTCCAAGAAATGT +
Preference number: 3 (lower is better)
Translates to: PWNCRQVAPILEVLASRENRPEA*GVSKKC
Trigger: ACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTT...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CCA 72 bp TTTCTGGTTTGTTTTCTCCTAATCAACGCACAGGGTTaGTTGTCCTCCTGGGGTGAAGGATGGGAAGGCTGG +
Preference number: 3 (lower is better)
Translates to: FLVCFLLINAQG*LSSWGEGWEGW
Trigger: CCAGCCTTCCCATCCTTCACCCCAGGAGGACAACCAACCCTGTGCGTTGATTAGGAGAAAACAAACCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR-3UTR CAA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTAACGCACAGGGTTGGTaGTCCTCCTGGGGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLNAQGW*SSWGEG
Trigger: TCCTTCACCCCAGGAGGACAACCAACCCTGTGCGTT...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 72 bp CCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTaGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTG +
Preference number: 3 (lower is better)
Translates to: PEALGVSKKCQL*EGFGASQRLNL
Trigger: CAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR TCA 72 bp ATACTCCAGTGTTCCTCCCTTCGGGAACAGCCTCTGTaGTCATCTGTGGACTACTTTAAATGGAAACACTCT +
Preference number: 3 (lower is better)
Translates to: ILQCSSLREQPL*SSVDYFKWKHS
Trigger: AGAGTGTTTCCATTTAAAGTAGTCCACAGATGATCACAGAGGCTGTTCCCGAAGGGAGGAACACTGGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTACTCCGATCTGGGGCTaGGGTAACTGTTCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPTPIWG*GNCSSF
Trigger: GAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTAGAGGTCAGTACCCTTaGGAAAAGACCCTCACCCCC +
Preference number: 3 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPRGQYP*EKTLTP
Trigger: GGGGGTGAGGGTCTTTTCCAAAGGGTACTGACCTCT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGACTTATTTACACAAGTaGATGGCAGGGGGATGTCCT +
Preference number: 3 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGTYLHK*MAGGCP
Trigger: AGGACATCCCCCTGCCATCAACTTGTGTAAATAAGT...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
3UTR CCA 72 bp GTTCCTCCCTTCGGGAACAGCCTCTGTGATCATCTGTaGACTACTTTAAATGGAAACACTCTTAACCTAAAT +
Preference number: 3 (lower is better)
Translates to: VPPFGNSLCDHL*TTLNGNTLNLN
Trigger: ATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATGATCACAGAGGCTGTTCCCGAAGGGAGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGGAATTGCAGACAGGTaGCGCCTATCTTGGAAGTTC +
Preference number: 3 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPGIADR*RLSWKF
Trigger: GAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR-3UTR CAA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTACTTATTTACACAAGTaGATGGCAGGGGGATGTCCT +
Preference number: 3 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPTYLHK*MAGGCP
Trigger: AGGACATCCCCCTGCCATCAACTTGTGTAAATAAGT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGGCCCACACGCGGGGCTaGCAGCGGCGCCACCATGTG +
Preference number: 4 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPAHTRG*QRRHHV
Trigger: CACATGGTGGCGCCGCTGGCAGCCCCGCGTGTGGGC...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR GCA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGGGCAAGCGCAGCTGCTaGCGGATCCCCATTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPGKRSC*RIPIGA
Trigger: CGCCCCAATGGGGATCCGGCAGCAGCTGCGCTTGCC...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR GCA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGGTGGGCAAGCGCAGCTaGTGCCGGATCCCCATTGGG +
Preference number: 4 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPVGKRS*CRIPIG
Trigger: CCCAATGGGGATCCGGCAGCAGCTGCGCTTGCCCAC...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGTCCCTGCCCTGCGGGTaGGCTGAGAAGACCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPSLPCG*AEKTRH
Trigger: ATGGCGGGTCTTCTCAGCCCACCCGCAGGGCAGGGA...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCCAGGCCTCCGTCGTaGGCGCCTGCGGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRSRPPS*APAALA
Trigger: CGCCAACGCCGCAGGCGCCCACGACGGAGGCCTGGA...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACAGGCTCGCCGGGGGCTaGCAGAGGAGGCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYRLAGG*QRRQPH
Trigger: ATGGGGCTGCCTCCTCTGCCAGCCCCCGGCGAGCCT...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR GCA 90 bp GCGAAGCTGGCAGTGCCCTTGGGGAATCCGATGAGAACTCCAGGAGCAGTGGGGGCGCATGCGTGTAGGTaGAGGCACCCTGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: AKLAVPLGNPMRTPGAVGAHACR*RHPGGR
Trigger: CCGGCCGCCAGGGTGCCTGCACCTACACGCATGCGC...CCCCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGTGCTTGCTGGCCCCCTaGCGCCCGCGGAAGGACGAG +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGCLLAP*RPRKDE
Trigger: CTCGTCCTTCCGCGGGCGCCAGGGGGCCAGCAAGCA...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGCCGCCGCCCGCGTCCTaGAAGCAGAGGCGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRPPPAS*KQRRLS
Trigger: GCTCAAGCGCCTCTGCTTCCAGGACGCGGGCGGCGG...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGGGGTGGGGTGATGGGTaGCGGCGGGCTGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKGWGDG*RRADAP
Trigger: GGGGGCATCAGCCCGCCGCCACCCATCACCCCACCC...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTGGCGGCCTTGGAGCTaGGGCCCGAGAGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPWRPWS*GPRGPP
Trigger: AGGTGGGCCTCTCGGGCCTCAGCTCCAAGGCCGCCA...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTTGGGTGGCGGCGGGCTaGTGCCCCCGCTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGWVAAG*CPRCRG
Trigger: ACCACGGCAGCGGGGGCATCAGCCCGCCGCCACCCA...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGCCCTCCCACCACCTaGGCTCAACTCGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: EKGEPDLERVPLARSLPPRPPTT*AQLGPA
Trigger: GGCGGGGCCGAGTTGAGCTCAGGTGGTGGGAGGGCG...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGCGCCCTCCCACCACCTaGGCTCAACTCGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGRPPTT*AQLGPA
Trigger: GGCGGGGCCGAGTTGAGCTCAGGTGGTGGGAGGGCG...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCTGCGCAGGCTGCTGCTaGTGCGGCGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: EKGEPDLERVPLARSLPPCAGCC*CGGSGG
Trigger: GCCACCGCTGCCGCCGCAGCAGCAGCAGCCTGCGCA...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR GCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACGTGGGCAAGCGCAGCTaGTGCCGGATCCCCATTGGG +
Preference number: 4 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYVGKRS*CRIPIG
Trigger: CCCAATGGGGATCCGGCAGCAGCTGCGCTTGCCCAC...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGAGTCGCAGGAGTGTGTaGGGATTGGGAGATGTGGCG +
Preference number: 4 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPSRRSV*GLGDVA
Trigger: CGCCACATCTCCCAATCCCCACACACTCCTGCGACT...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTGGAAGCAGAGGCGCTTaGGCTCGCCGCCCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCGSRGA*ARRPLR
Trigger: ACGGAGCGGGCGGCGAGCTCAAGCGCCTCTGCTTCC...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGGGAAGCAGAGGCGCTTaGGCTCGCCGCCCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGGSRGA*ARRPLR
Trigger: ACGGAGCGGGCGGCGAGCTCAAGCGCCTCTGCTTCC...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTTGGGTGGCGGCGGGCTaGTGCCCCCGCTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTWVAAG*CPRCRG
Trigger: ACCACGGCAGCGGGGGCATCAGCCCGCCGCCACCCA...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATGAGGAGGCAGCCCCATaGTCCCCAGCCCACCCGCTC +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNEEAAP*SPAHPL
Trigger: GAGCGGGTGGGCTGGGGATCATGGGGCTGCCTCCTC...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGGGCCCGCGATGCTGCTaGGGCTGCGGGATTTCTCGT +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGGPRCC*GCGISR
Trigger: ACGAGAAATCCCGCAGCCTCAGCAGCATCGCGGGCC...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTTCCACCCGCGAGCGTaGCGCGGTGAGGACCGCTGG +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNFHPRA*RGEDRW
Trigger: CCAGCGGTCCTCACCGCGTCACGCTCGCGGGTGGAA...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGGCCCTGCGGGTGGGCTaGGAAGACCCGCCATTAGCA +
Preference number: 4 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRALRVG*EDPPLA
Trigger: TGCTAATGGCGGGTCTTCTCAGCCCACCCGCAGGGC...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACTCCGTCGTGGGCGCCTaGGGCGTTGGCGGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDSVVGA*GVGGVG
Trigger: GCCAACGCCGCCAACGCCGCAGGCGCCCACGACGGA...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR GCA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCGCCCACACGCGGGGCTaGCAGCGGCGCCACCATGTG +
Preference number: 4 (lower is better)
Translates to: EMWRARVSLRILGAGLMSAHTRG*QRRHHV
Trigger: CACATGGTGGCGCCGCTGGCAGCCCCGCGTGTGGGC...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATCCTGGCCCGTGTCCGTaGGTTCCCGGAGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNPGPCP*VPGAQE
Trigger: CTCCTGCGCTCCGGGAACGCACGGACACGGGCCAGG...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTTCCAGGCCTCCGTCGTaGGCGCCTGCGGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPSRPPS*APAALA
Trigger: CGCCAACGCCGCAGGCGCCCACGACGGAGGCCTGGA...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGCAGGCTTGCAGTAGTTaGGCGAGCCCGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGQACSS*ASPVAG
Trigger: CCCCGCAACCGGGCTCGCCCAACTACTGCAAGCCTG...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
3UTR CAA 72 bp GCAAGGGGGCTGAGTGGAGCGAAGCTGGCAGTGCCCTaGGGGAATCCGATGAGAACTCCAGGAGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARGLSGAKLAVP*GNPMRTPGAVG
Trigger: CCCCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTTCGCTCCACTCAGCCCCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGGAAGCAGAGGCGCTTaGGCTCGCCGCCCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGGSRGA*ARRPLR
Trigger: ACGGAGCGGGCGGCGAGCTCAAGCGCCTCTGCTTCC...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGTGGGTGGCGGCGGGCTaGTGCCCCCGCTGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARWVAAG*CPRCRG
Trigger: ACCACGGCAGCGGGGGCATCAGCCCGCCGCCACCCA...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGGGGCGGATGAGAGGGTaGAATTCACCAGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPGRMRG*NSPEEF
Trigger: GAATTCCTCTGGTGAATTTCACCCTCTCATCCGCCC...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR GCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGGCCCACACGCGGGGCTaGCAGCGGCGCCACCATGTG +
Preference number: 4 (lower is better)
Translates to: GMEGDSRGISCARARSSQAHTRG*QRRHHV
Trigger: CACATGGTGGCGCCGCTGGCAGCCCCGCGTGTGGGC...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATGATGTTCTCCGGAGGTaGCCCGGGGATCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNDVLRR*PGDRGG
Trigger: GCCTCCCCGATCCCCGGGGCACCTCCGGAGAACATC...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATGGGCCCGGGGGTGTCTaGTGGCATCGTCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNGPGGV*WHRHLG
Trigger: ACCGAGATGACGATGCCAGCAGACACCCCCGGGCCC...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACGCGCATGCGTGTAGGTaGAGGCACCCTGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYAHACR*RHPGGR
Trigger: CCGGCCGCCAGGGTGCCTGCACCTACACGCATGCGC...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCCCTGGCCCGTGTCCGTaGGTTCCCGGAGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EMWRARVSLRILGAGLMSPGPCP*VPGAQE
Trigger: CTCCTGCGCTCCGGGAACGCACGGACACGGGCCAGG...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTCGACCCCTCCCTCCCTaGCCTGCGGGTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGRPLPP*PAGGLR
Trigger: TCTCAGCCCACCCGCAGGGCAGGGAGGGAGGGGTCG...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGCTTGCTGGCCCCCTaGCGCCCGCGGAAGGACGAG +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKCLLAP*RPRKDE
Trigger: CTCGTCCTTCCGCGGGCGCCAGGGGGCCAGCAAGCA...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAAGGCTCGCCGGGGGCTaGCAGAGGAGGCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKRLAGG*QRRQPH
Trigger: ATGGGGCTGCCTCCTCTGCCAGCCCCCGGCGAGCCT...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGGCTGGGCAGTCCTCGTaGGCAAGCGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGAGQSS*ASAAAA
Trigger: GGCAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGC...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTGGCAGGCTGGTCAATaGCTGGGCAGTCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRWQAGQ*LGSPRG
Trigger: CCCACGAGGACTGCCCAGCCATTGACCAGCCTGCCA...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCGGGAGCGCTAAAGGATaGAGGGCAGGGTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPGSAKG*RAGSGE
Trigger: CTCCCCCGACCCTGCCCTCCATCCTTTAGCGCTCCC...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAATGGCGGCCTTGGAGCTaGGGCCCGAGAGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LGEGLVPWNCRQVAPILEWRPWS*GPRGPP
Trigger: AGGTGGGCCTCTCGGGCCTCAGCTCCAAGGCCGCCA...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR TCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATTGGCGGCCTTGGAGCTaGGGCCCGAGAGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHWRPWS*GPRGPP
Trigger: AGGTGGGCCTCTCGGGCCTCAGCTCCAAGGCCGCCA...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGGAGGAGGCAGCCCCATaGTCCCCAGCCCACCCGCTC +
Preference number: 4 (lower is better)
Translates to: GMEGDSRGISCARARSSQEEAAP*SPAHPL
Trigger: GAGCGGGTGGGCTGGGGATCATGGGGCTGCCTCCTC...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGCACGGCTTCCAGGCGTaGTGGGGCTCTTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKHGFQA*WGSCLP
Trigger: CGGAAGACAAGAGCCCCATCACGCCTGGAAGCCGTG...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATCACCCCCAGCTCCTTTaGCCTTCTTCCCGGTCACCC +
Preference number: 4 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNHPQLL*PSSRSP
Trigger: GGGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTG...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCCGCCCTCCCGCCACCTaGGCTCAACTCCGATCTGGG +
Preference number: 4 (lower is better)
Translates to: EMWRARVSLRILGAGLMSRPPAT*AQLRSG
Trigger: CCCAGATCGGAGTTGAGCTCAGGTGGCGGGAGGGCG...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCGCCCTCCCACCACCTaGGCTCAACTCGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHRPPTT*AQLGPA
Trigger: GGCGGGGCCGAGTTGAGCTCAGGTGGTGGGAGGGCG...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GCGAAGCTGGCAGTGCCCTTGGGGAATCCGATGAGAACTCCAGGAGCAGTGGGGGGGGGAAGGGGCGGATaGGAGGGTGAAATTCACCAG +
Preference number: 4 (lower is better)
Translates to: AKLAVPLGNPMRTPGAVGGGRGG*EGEIHQ
Trigger: CTGGTGAATTTCACCCTCTCATCCGCCCCTTCCCCC...CCCCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTTCGC
62% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGGTGTGTTGGGGAGGGTaGGCCGCGGAGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGVCWGG*AAELRK
Trigger: CTTCCTGAGCTCCGCGGCTCACCCTCCCCAACACAC...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGTGCGCAGGCTGCTGCTaGTGCGGCGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWCAGCC*CGGSGG
Trigger: GCCACCGCTGCCGCCGCAGCAGCAGCAGCCTGCGCA...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGTCGTAGTCGAAGCGTaGCGCCGCCTCGGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPVVVEA*RRLGLR
Trigger: ACGGAGCCCGAGGCGGCGGCACGCTTCGACTACGAC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR GCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGTCCGTCGTGGGCGCCTaGGGCGTTGGCGGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARSVVGA*GVGGVG
Trigger: GCCAACGCCGCCAACGCCGCAGGCGCCCACGACGGA...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATGGGGTGGGTCAGGCTTaGAGTAGTTGGGCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNGVGQA*SSWASP
Trigger: CGGGCTCGCCCAACTACTGCAAGCCTGACCCACCCC...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGGGGCCCGGGGGTGTCTaGTGGCATCGTCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGGPGGV*WHRHLG
Trigger: ACCGAGATGACGATGCCAGCAGACACCCCCGGGCCC...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
62% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGGGGCCCGGGGGTGTCTaGTGGCATCGTCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGGPGGV*WHRHLG
Trigger: ACCGAGATGACGATGCCAGCAGACACCCCCGGGCCC...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGCCTCAAACCCGCGCATaGGGCCCCTGGCGGCTTATT +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKPQTRA*GPWRLI
Trigger: AATAAGCCGCCAGGGGCCGCATGCGCGGGTTTGAGG...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCCCTTCCCAGAGTGCCTaGCCCTCAAACCCGCGCATG +
Preference number: 4 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPPSQSA*PSNPRM
Trigger: CATGCGCGGGTTTGAGGGGCAGGCACTCTGGGAAGG...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGTCTCAGAATTCTGGGTaGAGGTCTCATGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPSQNSG*RSHVLG
Trigger: TCCCAGGACATGAGACCTGCACCCAGAATTCTGAGA...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAGAGACCGACGGGATTaGGTGGGAGGAGGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKRDRRD*VGGGAR
Trigger: CCTCGCTCCTCCTCCCACCCAATCCCGTCGGTCTCT...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGTGCTTGCTGGCCCCCTaGCGCCCGCGGAAGGACGAG +
Preference number: 4 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWCLLAP*RPRKDE
Trigger: CTCGTCCTTCCGCGGGCGCCAGGGGGCCAGCAAGCA...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCGAAGCTGGCAGTGCCCTTGGGGAATCCGATGAGAACTCCAGGAGCAGTGGGGAGGCTGGTCAATGGCTaGGCAGTCCTCGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AKLAVPLGNPMRTPGAVGRLVNG*AVLVGK
Trigger: CTTGCCCACGAGGACTGCCCAGCCATTGACCAGCCT...CCCCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTGGCAGGCTGGTCAATaGCTGGGCAGTCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPWQAGQ*LGSPRG
Trigger: CCCACGAGGACTGCCCAGCCATTGACCAGCCTGCCA...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCCCCGGGGGTGTCTGCTaGCATCGTCATCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPPGGVC*HRHLGC
Trigger: GCAACCGAGATGACGATGCCAGCAGACACCCCCGGG...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCGAAGCTGGCAGTGCCCTTGGGGAATCCGATGAGAACTCCAGGAGCAGTGGGGAGTGGGGAGGGAGGGTaGTTCAGGGAGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AKLAVPLGNPMRTPGAVGSGEGG*FREPLC
Trigger: ACACAGAGGCTCCCTGAACCACCCTCCCTCCCCACT...CCCCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACAGGGCTTTGGGGATATaGGTGCGGAACAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYRALGI*VRNRPE
Trigger: CTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGGGTGCGACATGCGTGTaGGGGGCGCGTCATGCAGCG +
Preference number: 4 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVGATCV*GARHAA
Trigger: CGCTGCATGACGCGCCCCCCACACGCATGTCGCACC...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGAATCGCCCCGCCCCCTaGCCCGTGTCCGTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWNRPAP*PVSVRS
Trigger: GGAACGCACGGACACGGGCCAGGGGGCGGGGCGATT...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGGGCGTGGGGGAGGCTTaGGGAAGGGGCCACGCCGAC +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQGVGEA*GRGHAD
Trigger: GTCGGCGTGGCCCCTTCCCCAAGCCTCCCCCACGCC...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTTTCATGCACCCAGGGTaGGCGTGGGGGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCFMHPG*AWGRLG
Trigger: CCCAAGCCTCCCCCACGCCCACCCTGGGTGCATGAA...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGTGCAAGGGGGCTGAGTaGAGCGAAGCTGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKCKGAE*SEAGSA
Trigger: GGCACTGCCAGCTTCGCTCCACTCAGCCCCCTTGCA...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GCGAAGCTGGCAGTGCCCTTGGGGAATCCGATGAGAACTCCAGGAGCAGTGGGGGGGGAAGCACGAAGATaGGGTGCAGGGAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AKLAVPLGNPMRTPGAVGGEARR*GAGKGQ
Trigger: CTGACCCTTCCCTGCACCCCATCTTCGTGCTTCCCC...CCCCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTTCGC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGGGACGAGACGCAGACTaGGCTCAGCATTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGGRDAD*AQHWTG
Trigger: CCCCGTCCAATGCTGAGCTCAGTCTGCGTCTCGTCC...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGCACCCCCAGCTCCTTTaGCCTTCTTCCCGGTCACCC +
Preference number: 4 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGHPQLL*PSSRSP
Trigger: GGGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTG...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGCTGGCGGCTTATTGCTaGGGTGGACTTGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKLAAYC*GGLGVG
Trigger: CCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAG...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGCGCCCTCCCGCCACCTaGGCTCAACTCCGATCTGGG +
Preference number: 4 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWRPPAT*AQLRSG
Trigger: CCCAGATCGGAGTTGAGCTCAGGTGGCGGGAGGGCG...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTGGTGCGGAACAGGCCTaGGGCTTTGGGGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCGAEQA*GFGGVQ
Trigger: TTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACC...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTGCGAGCGTGACGCGGTaGGGACCGCTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: APILEVLASREPGLDKSVASVTR*GPLGKG
Trigger: CCCCTTCCCCAGCGGTCCTCACCGCGTCACGCTCGC...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATTTCCACCCGCGAGCGTaGCGCGGTGAGGACCGCTGG +
Preference number: 4 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHFHPRA*RGEDRW
Trigger: CCAGCGGTCCTCACCGCGTCACGCTCGCGGGTGGAA...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACGTGTGTTGGGGAGGGTaGGCCGCGGAGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDVCWGG*AAELRK
Trigger: CTTCCTGAGCTCCGCGGCTCACCCTCCCCAACACAC...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACGCCCTGCGGGTGGGCTaGGAAGACCCGCCATTAGCA +
Preference number: 4 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYALRVG*EDPPLA
Trigger: TGCTAATGGCGGGTCTTCTCAGCCCACCCGCAGGGC...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCGCCCTGCGGGTGGGCTaGGAAGACCCGCCATTAGCA +
Preference number: 4 (lower is better)
Translates to: EMWRARVSLRILGAGLMSALRVG*EDPPLA
Trigger: TGCTAATGGCGGGTCTTCTCAGCCCACCCGCAGGGC...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTCCGCGGCGTTGGCGTTaGGGTCGGGCAAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGPRRWR*GRARSL
Trigger: CAAGCTTCTTGCCCGACCTCAACGCCAACGCCGCGG...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATAGCGGGGCTGGGGGCTaGCCTAGTTGTAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNSGAGG*PSCRER
Trigger: TCTTTCCCTACAACTAGGTCAGCCCCCAGCCCCGCT...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR GCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTTCCGTCGTGGGCGCCTaGGGCGTTGGCGGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFSVVGA*GVGGVG
Trigger: GCCAACGCCGCCAACGCCGCAGGCGCCCACGACGGA...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCGGCAAGCGCAGCTGCTaGCGGATCCCCATTGGGGCG +
Preference number: 4 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLGKRSC*RIPIGA
Trigger: CGCCCCAATGGGGATCCGGCAGCAGCTGCGCTTGCC...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAGTGGGCAAGCGCAGCTaGTGCCGGATCCCCATTGGG +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKVGKRS*CRIPIG
Trigger: CCCAATGGGGATCCGGCAGCAGCTGCGCTTGCCCAC...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAAAGCCTGGGGCTGCCTaGAGGGTTCTGCACCCCCGC +
Preference number: 4 (lower is better)
Translates to: LGEGLVPWNCRQVAPILEKPGAA*RVLHPR
Trigger: GCGGGGGTGCAGAACCCTGCAGGCAGCCCCAGGCTT...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGGAGGTAGCGGGGGCGTaGCTTAGGGGAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGEVAGA*LRGEEP
Trigger: TGGTTCCTCTCCCCTAAGCCACGCCCCCGCTACCTC...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTGGGTGGGGTGATGGGTaGCGGCGGGCTGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: APILEVLASREPGLDKSVGWGDG*RRADAP
Trigger: GGGGGCATCAGCCCGCCGCCACCCATCACCCCACCC...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAACTGCCGGATCCCCATTaGGGCGAGGATCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKLPDPH*GEDLPG
Trigger: ACCGGGCAGATCCTCGCCCCAATGGGGATCCGGCAG...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGCTGGGCAGTCCTCGTaGGCAAGCGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DKSVRALGIWVRNRPEALAGQSS*ASAAAA
Trigger: GGCAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGC...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCAAGAGCTTTTCGGATaGAGCCATCAGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYQELFG*SHQGKG
Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGCTCTTG...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000474951.1
CDS-3UTR CCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGGAGGTGGACTTGGAGTaGGGGCTCCAGGTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: KSWVRVADWRAGGDVGKREVDLE*GLQVRE
Trigger: TTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCTCCGATCTGGGGCTTaGGTAACTGTTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYLRSGA*VTVPPS
Trigger: GGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAG...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCGGGGATTGGGAGATGTaGCGTGCCAGGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPGDWEM*RARVSL
Trigger: GAGACTGACCCTGGCACGCCACATCTCCCAATCCCC...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACTGCTTGGGGAGGGTCTaGTTCCCTGGAATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYCLGRV*FPGIAD
Trigger: GTCTGCAATTCCAGGGAACCAGACCCTCCCCAAGCA...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGAGGTGGCTAATTCCGTaGGACCCCGGCTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRRWLIP*DPGSKR
Trigger: CCTTTTGGAGCCGGGGTCCCACGGAATTAGCCACCT...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGGTACGTGTGGCGGACTaGCGAGCAGGGGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGVRVAD*RAGGDV
Trigger: AACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTAC...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGAAAGCTGGGTACGTGTaGCGGACTGGCGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGKAGYV*RTGEQG
Trigger: CCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTT...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGAATCGCCCCGCCCCCTaGCCCGTGTCCGTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWNRPAP*PVSVRS
Trigger: GGAACGCACGGACACGGGCCAGGGGGCGGGGCGATT...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACTCCCTGCCCTGCGGGTaGGCTGAGAAGACCCGCCAT +
Preference number: 4 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYSLPCG*AEKTRH
Trigger: ATGGCGGGTCTTCTCAGCCCACCCGCAGGGCAGGGA...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATTCATGCACCCAGGGTaGGCGTGGGGGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKFMHPG*AWGRLG
Trigger: CCCAAGCCTCCCCCACGCCCACCCTGGGTGCATGAA...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGTTCATGCACCCAGGGTaGGCGTGGGGGAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVFMHPG*AWGRLG
Trigger: CCCAAGCCTCCCCCACGCCCACCCTGGGTGCATGAA...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGGTCGGGCAAGAAGCTTaGGGGGCCTGGCTTACGCCA +
Preference number: 4 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGVGQEA*GAWLTP
Trigger: TGGCGTAAGCCAGGCCCCCCAAGCTTCTTGCCCGAC...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR CAA 72 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTaGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTC +
Preference number: 4 (lower is better)
Translates to: GYVWRTGEQGET*GRGQYPLEKTL
Trigger: GAGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATAAGGGGCATAGTCGGTaGGGAGGAAGCAGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNKGHSR*GGSRLG
Trigger: ACCGAGCCTGCTTCCTCCTCACCGACTATGCCCCTT...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTCACCCCCAGCTCCTTTaGCCTTCTTCCCGGTCACCC +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGHPQLL*PSSRSP
Trigger: GGGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTG...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATCTGGCGGCTTATTGCTaGGGTGGACTTGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNLAAYC*GGLGVG
Trigger: CCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAG...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGGGGGGAAGGGGCGGATaGGAGGGTGAAATTCACCAG +
Preference number: 4 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGGGRGG*EGEIHQ
Trigger: CTGGTGAATTTCACCCTCTCATCCGCCCCTTCCCCC...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGCGAATCCCACACTATTaGCTTGGGGGATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKRIPHY*LGGWGG
Trigger: CCCACCCCATCCCCCAAGTCAATAGTGTGGGATTCG...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGTCGTAGTCGAAGCGTaGCGCCGCCTCGGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARVVVEA*RRLGLR
Trigger: ACGGAGCCCGAGGCGGCGGCACGCTTCGACTACGAC...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGGATGTTCTCCGGAGGTaGCCCGGGGATCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQDVLRR*PGDRGG
Trigger: GCCTCCCCGATCCCCGGGGCACCTCCGGAGAACATC...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGGATGTTCTCCGGAGGTaGCCCGGGGATCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWDVLRR*PGDRGG
Trigger: GCCTCCCCGATCCCCGGGGCACCTCCGGAGAACATC...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTGGGGTGGGTCAGGCTTaGAGTAGTTGGGCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTGVGQA*SSWASP
Trigger: CGGGCTCGCCCAACTACTGCAAGCCTGACCCACCCC...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGGGCAAGCGCAGCTGCTaGCGGATCCCCATTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWGKRSC*RIPIGA
Trigger: CGCCCCAATGGGGATCCGGCAGCAGCTGCGCTTGCC...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGTGGGCAAGCGCAGCTaGTGCCGGATCCCCATTGGG +
Preference number: 4 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWVGKRS*CRIPIG
Trigger: CCCAATGGGGATCCGGCAGCAGCTGCGCTTGCCCAC...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTCCTTCCCAGAGTGCCTaGCCCTCAAACCCGCGCATG +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGPSQSA*PSNPRM
Trigger: CATGCGCGGGTTTGAGGGGCAGGCACTCTGGGAAGG...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGCAGAGTTGGACGATTTaGAGACCTCCCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRQSWTI*RPPLPT
Trigger: TGTGGGGAGGGGAGGTCTGCAAATCGTCCAACTCTG...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTCGACCCCTCCCTCCCTaGCCTGCGGGTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: APILEVLASREPGLDKSVRPLPP*PAGGLR
Trigger: TCTCAGCCCACCCGCAGGGCAGGGAGGGAGGGGTCG...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGACATGCGGCAGCTTCTaGATTGGGCGGTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGTCGSF*IGRFMH
Trigger: GTGCATGAACCGCCCAATGCAGAAGCTGCCGCATGT...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATCTGCCTGCAGGGTTCTaGACCCCCGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHLPAGF*TPAGSS
Trigger: AGAGCTCCCTGCGGGGGTGCAGAACCCTGCAGGCAG...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR GCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTGAGGGCAGGGAACGGTaGGGCCGCCGTAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFEGRER*GRRSGA
Trigger: AGCCCCGCTACGGCGGCCGCACCGTTCCCTGCCCTC...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCCGAAGGCCACATACCTaGCAGCCCGCGACGAGTAGG +
Preference number: 4 (lower is better)
Translates to: EMWRARVSLRILGAGLMSRRPHT*QPATSR
Trigger: CCTACTCGTCGCGGGCTGCCAGGTATGTGGCCTTCG...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTCTGCCGGATCCCCATTaGGGCGAGGATCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTLPDPH*GEDLPG
Trigger: ACCGGGCAGATCCTCGCCCCAATGGGGATCCGGCAG...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGGCTGGGCAGTCCTCGTaGGCAAGCGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQAGQSS*ASAAAA
Trigger: GGCAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGC...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGAGCGCTAAAGGATaGAGGGCAGGGTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: DKSVRALGIWVRNRPEALGSAKG*RAGSGE
Trigger: CTCCCCCGACCCTGCCCTCCATCCTTTAGCGCTCCC...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCCGGGGGTGTCTGCTaGCATCGTCATCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVPGGVC*HRHLGC
Trigger: GCAACCGAGATGACGATGCCAGCAGACACCCCCGGG...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGTGCTTGGGGAGGGTCTaGTTCCCTGGAATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGCLGRV*FPGIAD
Trigger: GTCTGCAATTCCAGGGAACCAGACCCTCCCCAAGCA...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGCCATCCACCCTCGGGTaGGGGGTTCCTGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWPSTLG*GVPEAV
Trigger: CACGGCCTCAGGAACCCCCCACCCGAGGGTGGATGG...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGCCATCCACCCTCGGGTaGGGGGTTCCTGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQPSTLG*GVPEAV
Trigger: CACGGCCTCAGGAACCCCCCACCCGAGGGTGGATGG...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGAGCAGGGGGAGACGTTaGGAAGAGGTCAGTACCCTT +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGSRGRR*EEVSTL
Trigger: AAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCT...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACGTACGTGTGGCGGACTaGCGAGCAGGGGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDVRVAD*RAGGDV
Trigger: AACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTAC...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAAAAGCTGGGTACGTGTaGCGGACTGGCGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKKAGYV*RTGEQG
Trigger: CCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTT...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGGCTGAACTCAAAAGCTaGGTACGTGTGGCGGACTGG +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGAELKS*VRVADW
Trigger: CCAGTCCGCCACACGTACCCAGCTTTTGAGTTCAGC...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGGTGCGACATGCGTGTaGGGGGCGCGTCATGCAGCG +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARGATCV*GARHAA
Trigger: CGCTGCATGACGCGCCCCCCACACGCATGTCGCACC...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGCTAACGCGACCCAGCTaGACGAGTCGGGGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQLTRPS*TSRGRQ
Trigger: TTGGCGGCCCCGACTCGTCCAGCTGGGTCGCGTTAG...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGGAGAGGAACCAAACTaGTTGGCCTGGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPGEEPN*LAWGRW
Trigger: CCACCTCCCCCAGGCCAATCAGTTTGGTTCCTCTCC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR TCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGGCACGCCGCCCACGTTaGTCACGATCTTGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GMEGDSRGISCARARSSQARRPR*SRSCRC
Trigger: ACAGCGGCAAGATCGTGATCAACGTGGGCGGCGTGC...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATCAATCACCTCCTCCTaGGCCAACGGGCAAGGCTCG +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKSITSS*ANGQGS
Trigger: CGAGCCTTGCCCGTTGGCTCAGGAGGAGGTGATTGA...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGTCAATCACCTCCTCCTaGGCCAACGGGCAAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVSITSS*ANGQGS
Trigger: CGAGCCTTGCCCGTTGGCTCAGGAGGAGGTGATTGA...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGGAGGATCTGCCCGGTTaGTCTCAATCACCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKEDLPG*SQSPPP
Trigger: AGGAGGAGGTGATTGAGATCAACCGGGCAGATCCTC...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGTGCGGAACAGGCCTaGGGCTTTGGGGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWGAEQA*GFGGVQ
Trigger: TTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACC...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGAGGTAGCGCATCCTTaGGCCAGGATAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPEVAHP*ARIGGG
Trigger: CCCACCTCCTATCCTGGCTCAAGGATGCGCTACCTC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACGAGGTAGCGCATCCTTaGGCCAGGATAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYEVAHP*ARIGGG
Trigger: CCCACCTCCTATCCTGGCTCAAGGATGCGCTACCTC...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCTCCTTCGGCTTTCGTaGAGGTCAGGGGAAACGGGG +
Preference number: 4 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVLLRLS*RSGETG
Trigger: CCCCGTTTCCCCTGACCTTCACGAAAGCCGAAGGAG...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTCTCCTTCGGCTTTCGTaGAGGTCAGGGGAAACGGGG +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGLLRLS*RSGETG
Trigger: CCCCGTTTCCCCTGACCTTCACGAAAGCCGAAGGAG...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCTTGGGGAATCCGATaGGAACTCCAGGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCPWGIR*ELQEQW
Trigger: CCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGG...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR GCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCCCTCAAACCCGCGCATaGGGCCCCTGGCGGCTTATT +
Preference number: 4 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLPQTRA*GPWRLI
Trigger: AATAAGCCGCCAGGGGCCGCATGCGCGGGTTTGAGG...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTCCTTCCCAGAGTGCCTaGCCCTCAAACCCGCGCATG +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTPSQSA*PSNPRM
Trigger: CATGCGCGGGTTTGAGGGGCAGGCACTCTGGGAAGG...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCATTGGGCGGTTCATaGACCCAGGGTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARALGGS*TQGGRG
Trigger: CCCACGCCCACCCTGGGTGCATGAACCGCCCAATGC...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTAGGGGCTGGGTGGAATaGATGTGGGAGCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTRGWVE*MWEQPA
Trigger: CGCTGGCTGCTCCCACATGCATTCCACCCAGCCCCT...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTCCGCCGCCCGCGTCCTaGAAGCAGAGGCGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFPPPAS*KQRRLS
Trigger: GCTCAAGCGCCTCTGCTTCCAGGACGCGGGCGGCGG...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGCGAAGGCCACATACCTaGCAGCCCGCGACGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQRRPHT*QPATSR
Trigger: CCTACTCGTCGCGGGCTGCCAGGTATGTGGCCTTCG...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAAGGCTGGTCAATGGCTaGGCAGTCCTCGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKRLVNG*AVLVGK
Trigger: CTTGCCCACGAGGACTGCCCAGCCATTGACCAGCCT...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCTTCCGGGGACATaGCAGGCTGGTCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGCLPGT*QAGQWL
Trigger: CAGCCATTGACCAGCCTGCCATGTCCCCGGAAGACA...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGCAAGAGCTTTTCGGATaGAGCCATCAGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKQELFG*SHQGKG
Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGCTCTTG...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000474951.1
CDS-3UTR CCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTAAGGCATGCAGTGTGTaGGGGGAGGTGCCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCKACSV*GEVPQD
Trigger: ATCTTGGGGCACCTCCCCCCACACACTGCATGCCTT...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTGAGGTGGACTTGGAGTaGGGGCTCCAGGTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCEVDLE*GLQVRE
Trigger: TTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGTTGCTGAGGTGGACTTaGAGTGGGGGCTCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKLLRWT*SGGSRL
Trigger: TAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAA...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCGGGGATTGGGAGATGTaGCGTGCCAGGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: EMWRARVSLRILGAGLMSGDWEM*RARVSL
Trigger: GAGACTGACCCTGGCACGCCACATCTCCCAATCCCC...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTGGATCCCAGCCGAGCTaGGTGTTGTCGGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCGSQPS*VLSVPN
Trigger: ATTGGGAACCGACAACACCCAGCTCGGCTGGGATCC...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGAGTCTGGGACCGGTGTaGTCTCTGGGCTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GMEGDSRGISCARARSSQSLGPV*SLGLGE
Trigger: CTCCCCCAAGCCCAGAGACCACACCGGTCCCAGACT...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTGGTGCGACATGCGTGTaGGGGGCGCGTCATGCAGCG +
Preference number: 4 (lower is better)
Translates to: APILEVLASREPGLDKSVGATCV*GARHAA
Trigger: CGCTGCATGACGCGCCCCCCACACGCATGTCGCACC...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCGGCGTGGGGGAGGCTTaGGGAAGGGGCCACGCCGAC +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTGVGEA*GRGHAD
Trigger: GTCGGCGTGGCCCCTTCCCCAAGCCTCCCCCACGCC...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCGTGGGGGAGCACCAGTaGCTTTTCGGATGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: EKGEPDLERVPLARSLPPVGEHQ*LFGWSH
Trigger: ATGGCTCCATCCGAAAAGCCACTGGTGCTCCCCCAC...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGGGTTTCTGCAAAGCCTaGGGCTGCCTGCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGGFCKA*GCLQGS
Trigger: AGAACCCTGCAGGCAGCCCCAGGCTTTGCAGAAACC...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGAGAGGAACCAAACTaGTTGGCCTGGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: DKSVRALGIWVRNRPEALGEEPN*LAWGRW
Trigger: CCACCTCCCCCAGGCCAATCAGTTTGGTTCCTCTCC...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGCCACCTCCACGTTGGTaGTGTTCTCCGGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQPPPRW*CSPEVP
Trigger: GGGCACCTCCGGAGAACATCACCAACGTGGAGGTGG...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGAAGGGGCATAGTCGGTaGGGAGGAAGCAGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQKGHSR*GGSRLG
Trigger: ACCGAGCCTGCTTCCTCCTCACCGACTATGCCCCTT...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCAATTCTCCTAAAGGCTaGGGGAGCAGGTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPNSPKG*GSRSKA
Trigger: GGCTTTGGACCTGCTCCCTCAGCCTTTAGGAGAATT...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCGCGAGCGTGACGCGGTaGGGACCGCTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIASVTR*GPLGKG
Trigger: CCCCTTCCCCAGCGGTCCTCACCGCGTCACGCTCGC...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGCTCCTTCGGCTTTCGTaGAGGTCAGGGGAAACGGGG +
Preference number: 4 (lower is better)
Translates to: GMEGDSRGISCARARSSQLLRLS*RSGETG
Trigger: CCCCGTTTCCCCTGACCTTCACGAAAGCCGAAGGAG...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGCGCCCCGCCCACATTTaGGTGAGAGAAACTTATTGC +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKRPAHI*VRETYC
Trigger: GCAATAAGTTTCTCTCACTCAAATGTGGGCGGGGCG...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGCCTCAAACCCGCGCATaGGGCCCCTGGCGGCTTATT +
Preference number: 4 (lower is better)
Translates to: CRQVAPILEVLASREPGLPQTRA*GPWRLI
Trigger: AATAAGCCGCCAGGGGCCGCATGCGCGGGTTTGAGG...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATTTGGGAGATGTGGCGTaGCAGGGTCAGTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNLGDVA*QGQSQN
Trigger: ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGCCAAGCAGCGATGCCTaGACTTATCGGCTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: RALGIWVRNRPEALGVSKPSSDA*TYRLLY
Trigger: GTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTGG...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCGCGCATGCGTGTAGGTaGAGGCACCCTGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTAHACR*RHPGGR
Trigger: CCGGCCGCCAGGGTGCCTGCACCTACACGCATGCGC...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATACATGCGGCAGCTTCTaGATTGGGCGGTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNTCGSF*IGRFMH
Trigger: GTGCATGAACCGCCCAATGCAGAAGCTGCCGCATGT...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGGAGGTAGCGGGGGCGTaGCTTAGGGGAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQEVAGA*LRGEEP
Trigger: TGGTTCCTCTCCCCTAAGCCACGCCCCCGCTACCTC...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGACCGACGGGATTGGGTaGGAGGAGGAGCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: CRQVAPILEVLASREPGLTDGIG*EEERGS
Trigger: GCTACCTCGCTCCTCCTCCCACCCAATCCCGTCGGT...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGAGAGACCGACGGGATTaGGTGGGAGGAGGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWRDRRD*VGGGAR
Trigger: CCTCGCTCCTCCTCCCACCCAATCCCGTCGGTCTCT...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGGGGATCGGGGAGGCCTaGGTCACCGTCTTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQGIGEA*VTVLLL
Trigger: TAGCAACAAGACGGTGACCCAGGCCTCCCCGATCCC...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGTGGCAGGCTGGTCAATaGCTGGGCAGTCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARWQAGQ*LGSPRG
Trigger: CCCACGAGGACTGCCCAGCCATTGACCAGCCTGCCA...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGTGGCAGGCTGGTCAATaGCTGGGCAGTCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: CRQVAPILEVLASREPGLWQAGQ*LGSPRG
Trigger: CCCACGAGGACTGCCCAGCCATTGACCAGCCTGCCA...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAAAGGCATGCAGTGTGTaGGGGGAGGTGCCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKKACSV*GEVPQD
Trigger: ATCTTGGGGCACCTCCCCCCACACACTGCATGCCTT...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGGCTTATTGCTGAGGTaGACTTGGAGTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPGLLLR*TWSGGS
Trigger: GGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGAGTGGGGAGGGAGGGTaGTTCAGGGAGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DKSVRALGIWVRNRPEALSGEGG*FREPLC
Trigger: ACACAGAGGCTCCCTGAACCACCCTCCCTCCCCACT...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACAGGTTTGAGAAGTGCTaGGACGCAGTTCAGGGAATT +
Preference number: 4 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYRFEKC*DAVQGI
Trigger: AATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCT...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAAGGGCTTTGGGGATATaGGTGCGGAACAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKRALGI*VRNRPE
Trigger: CTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGAGTCTGTTAGGGCTTTaGGGATATGGGTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRSLLGL*GYGCGT
Trigger: TGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAAGGTGGCTAATTCCGTaGGACCCCGGCTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKRWLIP*DPGSKR
Trigger: CCTTTTGGAGCCGGGGTCCCACGGAATTAGCCACCT...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGGCAGAGGGAGGGAGGTaGCTAATTCCGTGGGACCCC +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWAEGGR*LIPWDP
Trigger: GGGGTCCCACGGAATTAGCCACCTCCCTCCCTCTGC...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATAGCAGGGGGAGACGTTaGGAAGAGGTCAGTACCCTT +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNSRGRR*EEVSTL
Trigger: AAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCT...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTCGGCAGCTTCTGCATTaGGCGGTTCATGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTRQLLH*AVHAPR
Trigger: CCTGGGTGCATGAACCGCCCAATGCAGAAGCTGCCG...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTCACGGCTTCCAGGCGTaGTGGGGCTCTTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFHGFQA*WGSCLP
Trigger: CGGAAGACAAGAGCCCCATCACGCCTGGAAGCCGTG...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATCGAGGTCTCAGGCGGTaGCAAGAGCTTTTCGGATGG +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHRGLRR*QELFGW
Trigger: CCATCCGAAAAGCTCTTGTCACCGCCTGAGACCTCG...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000474951.1
CDS-3UTR TCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCCGAGGTCTCAGGCGGTaGCAAGAGCTTTTCGGATGG +
Preference number: 4 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLRGLRR*QELFGW
Trigger: CCATCCGAAAAGCTCTTGTCACCGCCTGAGACCTCG...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000474951.1
CDS-3UTR TCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTCACCCCCAGCTCCTTTaGCCTTCTTCCCGGTCACCC +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFHPQLL*PSSRSP
Trigger: GGGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTG...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGCTGGCGGCTTATTGCTaGGGTGGACTTGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQLAAYC*GGLGVG
Trigger: CCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAG...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGGGGCGGATGAGAGGGTaGAATTCACCAGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGGRMRG*NSPEEF
Trigger: GAATTCCTCTGGTGAATTTCACCCTCTCATCCGCCC...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGGCGAGCGTGACGCGGTaGGGACCGCTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSASVTR*GPLGKG
Trigger: CCCCTTCCCCAGCGGTCCTCACCGCGTCACGCTCGC...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTCGAATCCCACACTATTaGCTTGGGGGATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTRIPHY*LGGWGG
Trigger: CCCACCCCATCCCCCAAGTCAATAGTGTGGGATTCG...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATCGCCCCGCCCACATTTaGGTGAGAGAAACTTATTGC +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNRPAHI*VRETYC
Trigger: GCAATAAGTTTCTCTCACTCAAATGTGGGCGGGGCG...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTTGCGCAGGCTGCTGCTaGTGCGGCGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLCAGCC*CGGSGG
Trigger: GCCACCGCTGCCGCCGCAGCAGCAGCAGCCTGCGCA...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTCCTTCCCAGAGTGCCTaGCCCTCAAACCCGCGCATG +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFPSQSA*PSNPRM
Trigger: CATGCGCGGGTTTGAGGGGCAGGCACTCTGGGAAGG...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCTTTGGGGATATGGGTaGGGAACAGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDLWGYG*GTGLRL
Trigger: AAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAG...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCCGACCCCTCCCTCCCTaGCCTGCGGGTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIRPLPP*PAGGLR
Trigger: TCTCAGCCCACCCGCAGGGCAGGGAGGGAGGGGTCG...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTGCATTGGGCGGTTCATaGACCCAGGGTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFALGGS*TQGGRG
Trigger: CCCACGCCCACCCTGGGTGCATGAACCGCCCAATGC...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTTGTCTTCCGGGGACATaGCAGGCTGGTCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTCLPGT*QAGQWL
Trigger: CAGCCATTGACCAGCCTGCCATGTCCCCGGAAGACA...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGTGTCTTCCGGGGACATaGCAGGCTGGTCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: DKSVRALGIWVRNRPEALCLPGT*QAGQWL
Trigger: CAGCCATTGACCAGCCTGCCATGTCCCCGGAAGACA...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGGGTTGGTTGTCCTCCTaGGGTGAAGGATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GMEGDSRGISCARARSSQGWLSS*GEGWEG
Trigger: GCCTTCCCATCCTTCACCCCAGGAGGACAACCAACC...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACCTCCGATCTGGGGCTTaGGTAACTGTTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYLRSGA*VTVPPS
Trigger: GGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAG...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGAGCTCAACTCCGATCTaGGGCTTGGGTAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGSSTPI*GLGNCS
Trigger: GGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCT...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGGGGATTGGGAGATGTaGCGTGCCAGGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARGDWEM*RARVSL
Trigger: GAGACTGACCCTGGCACGCCACATCTCCCAATCCCC...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATAGTCGCAGGAGTGTGTaGGGATTGGGAGATGTGGCG +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHSRRSV*GLGDVA
Trigger: CGCCACATCTCCCAATCCCCACACACTCCTGCGACT...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCGTTCAGGGAATTTGGTaGGGGTGTTTGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EMWRARVSLRILGAGLMSVQGIW*GCLGWQ
Trigger: CTGCCACCCCAAACACCCCCACCAAATTCCCTGAAC...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCAGGGCTTTGGGGATATaGGTGCGGAACAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLRALGI*VRNRPE
Trigger: CTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCAGTCTGTTAGGGCTTTaGGGATATGGGTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPSLLGL*GYGCGT
Trigger: TGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGCTTGGGGAGGGTCTaGTTCCCTGGAATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKCLGRV*FPGIAD
Trigger: GTCTGCAATTCCAGGGAACCAGACCCTCCCCAAGCA...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGATCCCAGCCGAGCTaGGTGTTGTCGGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: DKSVRALGIWVRNRPEALGSQPS*VLSVPN
Trigger: ATTGGGAACCGACAACACCCAGCTCGGCTGGGATCC...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTGAGGTCAGTACCCTTTaGAAAAGACCCTCACCCCCT +
Preference number: 4 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCEVSTL*KRPSPP
Trigger: AGGGGGTGAGGGTCTTTTCCAAAGGGTACTGACCTC...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGCTGAACTCAAAAGCTaGGTACGTGTGGCGGACTGG +
Preference number: 4 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPAELKS*VRVADW
Trigger: CCAGTCCGCCACACGTACCCAGCTTTTGAGTTCAGC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCGGCAGCTTCTGCATTaGGCGGTTCATGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHRQLLH*AVHAPR
Trigger: CCTGGGTGCATGAACCGCCCAATGCAGAAGCTGCCG...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GTGGCTTTTCCAGGCAACGCTAAGGGAGCTGTCTGGACAAAAGGTGTCTTGATCTGGGGAGGGGCTGGGTaGAATGCATGTGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VAFPGNAKGAVWTKGVLIWGGAG*NACGSS
Trigger: GCTGCTCCCACATGCATTCCACCCAGCCCCTCCCCA...GATCAAGACACCTTTTGTCCAGACAGCTCCCTTAGCGTTGCCTGGAAAAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTGGACGAGACGCAGACTaGGCTCAGCATTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFGRDAD*AQHWTG
Trigger: CCCCGTCCAATGCTGAGCTCAGTCTGCGTCTCGTCC...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGCGCCCTCCCACCACCTaGGCTCAACTCGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGRPPTT*AQLGPA
Trigger: GGCGGGGCCGAGTTGAGCTCAGGTGGTGGGAGGGCG...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGGGGCGGATGAGAGGGTaGAATTCACCAGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVGRMRG*NSPEEF
Trigger: GAATTCCTCTGGTGAATTTCACCCTCTCATCCGCCC...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCGGTTCCCAATCTTCTaGTACTCCAGTGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVRFPIF*YSSVPP
Trigger: GGGAGGAACACTGGAGTATCAGAAGATTGGGAACCG...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACATAGGAGGTGGGAAATaGTTTTCCACCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDIGGGK*FSTRER
Trigger: ACGCTCGCGGGTGGAAAATCATTTCCCACCTCCTAT...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAGGTCCAAGAAGGCTCTaGGCTTCTGACGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASREGPRRL*ASDGCG
Trigger: CCCGCACCCGTCAGAAGCTCAGAGCCTTCTTGGACC...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR GCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTCAGAATTCTGGGTaGAGGTCTCATGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNSQNSG*RSHVLG
Trigger: TCCCAGGACATGAGACCTGCACCCAGAATTCTGAGA...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTTGGAGGTTTGAGAAGTaGTGGGACGCAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPWRFEK*WDAVQG
Trigger: TCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCA...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTTGGAGGTTTGAGAAGTaGTGGGACGCAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGWRFEK*WDAVQG
Trigger: TCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCA...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGCTTTGGGGATATGGGTaGGGAACAGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWLWGYG*GTGLRL
Trigger: AAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAG...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATCTTTGGGGATATGGGTaGGGAACAGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHLWGYG*GTGLRL
Trigger: AAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAG...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGGAATTGCAGACAGGTTaGGCCTATCTTGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGELQTG*AYLGSS
Trigger: AGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTC...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAACTGGTTCCCTGGAATTaGAGACAGGTTGCGCCTATC +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKLVPWN*RQVAPI
Trigger: GATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAG...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGTTGCATAGGAATCGTTaGATCGAGAATCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGLHRNR*IENRAQ
Trigger: CTGAGCACGATTCTCGATGCAACGATTCCTATGCAA...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTGAGGTAGCGGGGGCGTaGCTTAGGGGAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFEVAGA*LRGEEP
Trigger: TGGTTCCTCTCCCCTAAGCCACGCCCCCGCTACCTC...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGCCGCCGCCCGCGTCCTaGAAGCAGAGGCGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSPPPAS*KQRRLS
Trigger: GCTCAAGCGCCTCTGCTTCCAGGACGCGGGCGGCGG...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTGGGATCGGGGAGGCCTaGGTCACCGTCTTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFGIGEA*VTVLLL
Trigger: TAGCAACAAGACGGTGACCCAGGCCTCCCCGATCCC...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGAAACTCCACCTTGTCTaGGCAGAAGGTGATGCGCAT +
Preference number: 4 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGKLHLV*AEGDAH
Trigger: ATGCGCATCACCTTCTGCCCAGACAAGGTGGAGTTT...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGAGGCTCGCCGGGGGCTaGCAGAGGAGGCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSRLAGG*QRRQPH
Trigger: ATGGGGCTGCCTCCTCTGCCAGCCCCCGGCGAGCCT...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTAGGCTGGTCAATGGCTaGGCAGTCCTCGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFRLVNG*AVLVGK
Trigger: CTTGCCCACGAGGACTGCCCAGCCATTGACCAGCCT...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGAAGGCATGCAGTGTGTaGGGGGAGGTGCCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWKACSV*GEVPQD
Trigger: ATCTTGGGGCACCTCCCCCCACACACTGCATGCCTT...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGAGGTGGACTTGGAGTaGGGGCTCCAGGTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCAREVDLE*GLQVRE
Trigger: TTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTTTGCTGAGGTGGACTTaGAGTGGGGGCTCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTLLRWT*SGGSRL
Trigger: TAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAA...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTATCAACGCACAGGGTTaGTTGTCCTCCTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPINAQG*LSSWGE
Trigger: TTCACCCCAGGAGGACAACCAACCCTGTGCGTTGAT...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTATCAACGCACAGGGTTaGTTGTCCTCCTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGINAQG*LSSWGE
Trigger: TTCACCCCAGGAGGACAACCAACCCTGTGCGTTGAT...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGAGCTCAACTCCGATCTaGGGCTTGGGTAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVSSTPI*GLGNCS
Trigger: GGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCT...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGGTTCAGGGAATTTGGTaGGGGTGTTTGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQVQGIW*GCLGWQ
Trigger: CTGCCACCCCAAACACCCCCACCAAATTCCCTGAAC...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATAGGTGGCTAATTCCGTaGGACCCCGGCTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHRWLIP*DPGSKR
Trigger: CCTTTTGGAGCCGGGGTCCCACGGAATTAGCCACCT...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAGAGGTCAGTACCCTTTaGAAAAGACCCTCACCCCCT +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKEVSTL*KRPSPP
Trigger: AGGGGGTGAGGGTCTTTTCCAAAGGGTACTGACCTC...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGGATTTCTCGTAACCTaGGGGGTGGGGAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARGFLVT*GVGRCA
Trigger: TGCACACCTCCCCACCCCCCAGGTTACGAGAAATCC...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTCGTAACCTTTTCGGATaGAGCCATCAGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTRNLFG*SHQGKG
Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGGTTACG...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000670667.1
3UTR CAA 72 bp TGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATaGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: CVQRLSRRSVWG*GDVACQGQSQN
Trigger: ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCGGCCCGCGATGCTGCTaGGGCTGCGGGATTTCTCGT +
Preference number: 4 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIGPRCC*GCGISR
Trigger: ACGAGAAATCCCGCAGCCTCAGCAGCATCGCGGGCC...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTCTGGCGGCTTATTGCTaGGGTGGACTTGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFLAAYC*GGLGVG
Trigger: CCCCACTCCAAGTCCACCTCAGCAATAAGCCGCCAG...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGAATTCTCCTAAAGGCTaGGGGAGCAGGTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWNSPKG*GSRSKA
Trigger: GGCTTTGGACCTGCTCCCTCAGCCTTTAGGAGAATT...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATAATTCTCCTAAAGGCTaGGGGAGCAGGTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHNSPKG*GSRSKA
Trigger: GGCTTTGGACCTGCTCCCTCAGCCTTTAGGAGAATT...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCCAAGTCTTGGAGGTTTaGGAAGTGCTGGGACGCAGT +
Preference number: 4 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLQVLEV*EVLGRS
Trigger: ACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTG...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTCGGTTCCCAATCTTCTaGTACTCCAGTGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTRFPIF*YSSVPP
Trigger: GGGAGGAACACTGGAGTATCAGAAGATTGGGAACCG...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAGTGTGTTGGGGAGGGTaGGCCGCGGAGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QAAMPALIGFCTKCVLETVCWGG*AAELRK
Trigger: CTTCCTGAGCTCCGCGGCTCACCCTCCCCAACACAC...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAACGCCCCGCCCACATTTaGGTGAGAGAAACTTATTGC +
Preference number: 4 (lower is better)
Translates to: LGEGLVPWNCRQVAPILERPAHI*VRETYC
Trigger: GCAATAAGTTTCTCTCACTCAAATGTGGGCGGGGCG...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGAGGTCTGAGTCCATaGAGCAAGAATAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWGGLSP*SKNRGE
Trigger: CTCGCCTCTATTCTTGCTGCATGGACTCAGACCTCC...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATCTGGTTCCCTGGAATTaGAGACAGGTTGCGCCTATC +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHLVPWN*RQVAPI
Trigger: GATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAG...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTCTAGCCAAGCAGCGATaGCTGCACTTATCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTLAKQR*LHLSAS
Trigger: AGAAGCCGATAAGTGCAGGCATCGCTGCTTGGCTAG...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGCAGAGTTGGACGATTTaGAGACCTCCCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWQSWTI*RPPLPT
Trigger: TGTGGGGAGGGGAGGTCTGCAAATCGTCCAACTCTG...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGCAGAGTTGGACGATTTaGAGACCTCCCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: CRQVAPILEVLASREPGLQSWTI*RPPLPT
Trigger: TGTGGGGAGGGGAGGTCTGCAAATCGTCCAACTCTG...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATTCCAGGCCTCCGTCGTaGGCGCCTGCGGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDSRPPS*APAALA
Trigger: CGCCAACGCCGCAGGCGCCCACGACGGAGGCCTGGA...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACAAACTCCACCTTGTCTaGGCAGAAGGTGATGCGCAT +
Preference number: 4 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYKLHLV*AEGDAH
Trigger: ATGCGCATCACCTTCTGCCCAGACAAGGTGGAGTTT...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCCAGGCTTGCAGTAGTTaGGCGAGCCCGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIQACSS*ASPVAG
Trigger: CCCCGCAACCGGGCTCGCCCAACTACTGCAAGCCTG...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAAGGCTGGTCAATGGCTaGGCAGTCCTCGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASRERLVNG*AVLVGK
Trigger: CTTGCCCACGAGGACTGCCCAGCCATTGACCAGCCT...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTTGTCTTCCGGGGACATaGCAGGCTGGTCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: APILEVLASREPGLDKSVCLPGT*QAGQWL
Trigger: CAGCCATTGACCAGCCTGCCATGTCCCCGGAAGACA...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGCTCCGATCTGGGGCTTaGGTAACTGTTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARLRSGA*VTVPPS
Trigger: GGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAG...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTTCATCCCAGGAATTCTaGGATAGGAGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGSSQEF*DRRSES
Trigger: GGACTCAGACCTCCTATCCCAGAATTCCTGGGATGA...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAACTCATGTCCTGGGAATaGAGGGAGATAGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: LGEGLVPWNCRQVAPILELMSWE*REIVGE
Trigger: TTCCCCGACTATCTCCCTCCATTCCCAGGACATGAG...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACAGCTGGGTCAAGTCTTaGAGGTTTGAGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDSWVKS*RFEKCW
Trigger: CCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCT...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCACAGGCCTGAGGCTTTaGGGGTGTCCAAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLTGLRL*GCPRNV
Trigger: GACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGT...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGGAGGGTCTGGTTCCCTaGAATTGCAGACAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWEGLVP*NCRQVA
Trigger: CGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTC...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTGGATCCCAGCCGAGCTaGGTGTTGTCGGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: APILEVLASREPGLDKSVGSQPS*VLSVPN
Trigger: ATTGGGAACCGACAACACCCAGCTCGGCTGGGATCC...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGAGGTCAGTACCCTTTaGAAAAGACCCTCACCCCCT +
Preference number: 4 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWEVSTL*KRPSPP
Trigger: AGGGGGTGAGGGTCTTTTCCAAAGGGTACTGACCTC...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGAATCGCCCCGCCCCCTaGCCCGTGTCCGTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGNRPAP*PVSVRS
Trigger: GGAACGCACGGACACGGGCCAGGGGGCGGGGCGATT...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CAA 72 bp CTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTaGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LVPWNCRQVAPI*EVLASREPGLD
Trigger: GTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACACACGGCTTCCAGGCGTaGTGGGGCTCTTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: QAAMPALIGFCTKCVLETHGFQA*WGSCLP
Trigger: CGGAAGACAAGAGCCCCATCACGCCTGGAAGCCGTG...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGCGCCCTCCCGCCACCTaGGCTCAACTCCGATCTGGG +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGRPPAT*AQLRSG
Trigger: CCCAGATCGGAGTTGAGCTCAGGTGGCGGGAGGGCG...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGCAAGTCTTGGAGGTTTaGGAAGTGCTGGGACGCAGT +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQQVLEV*EVLGRS
Trigger: ACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTG...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAGGTGCGGAACAGGCCTaGGGCTTTGGGGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QAAMPALIGFCTKCVLETGAEQA*GFGGVQ
Trigger: TTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACC...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAACGGGAACAGCCTCTGTaGTCATCTGTGGACTACTTT +
Preference number: 4 (lower is better)
Translates to: LGEGLVPWNCRQVAPILEREQPL*SSVDYF
Trigger: AAAGTAGTCCACAGATGATCACAGAGGCTGTTCCCG...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCGGTTCCCAATCTTCTaGTACTCCAGTGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHRFPIF*YSSVPP
Trigger: GGGAGGAACACTGGAGTATCAGAAGATTGGGAACCG...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGATGGAGAGAGAAAGTaGACAAATCGGGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGDGERK*TNRGVS
Trigger: ACTGACTCCCCGATTTGTTCACTTTCTCTCTCCATC...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR GCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGGAGGTCTGAGTCCATaGAGCAAGAATAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARGGLSP*SKNRGE
Trigger: CTCGCCTCTATTCTTGCTGCATGGACTCAGACCTCC...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATTCTCAGAATTCTGGGTaGAGGTCTCATGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHSQNSG*RSHVLG
Trigger: TCCCAGGACATGAGACCTGCACCCAGAATTCTGAGA...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGTTGGGAGATGTGGCGTaGCAGGGTCAGTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWLGDVA*QGQSQN
Trigger: ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGTTGGGAGATGTGGCGTaGCAGGGTCAGTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARLGDVA*QGQSQN
Trigger: ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTGGAGGTTTGAGAAGTaGTGGGACGCAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQWRFEK*WDAVQG
Trigger: TCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCA...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTCTTTGGGGATATGGGTaGGGAACAGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFLWGYG*GTGLRL
Trigger: AAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAG...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGCCAAGCAGCGATGCCTaGACTTATCGGCTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWPSSDA*TYRLLY
Trigger: GTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTGG...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGCCAAGCAGCGATGCCTaGACTTATCGGCTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: CRQVAPILEVLASREPGLPSSDA*TYRLLY
Trigger: GTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTGG...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGCTAGCCAAGCAGCGATaGCTGCACTTATCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWLAKQR*LHLSAS
Trigger: AGAAGCCGATAAGTGCAGGCATCGCTGCTTGGCTAG...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCTTGCATAGGAATCGTTaGATCGAGAATCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: EKGEPDLERVPLARSLPPLHRNR*IENRAQ
Trigger: CTGAGCACGATTCTCGATGCAACGATTCCTATGCAA...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GTGGCTTTTCCAGGCAACGCTAAGGGAGCTGTCTGGACAAAAGGTGTCTTGATCACATGCGGCAGCTTCTaGATTGGGCGGTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: VAFPGNAKGAVWTKGVLITCGSF*IGRFMH
Trigger: GTGCATGAACCGCCCAATGCAGAAGCTGCCGCATGT...GATCAAGACACCTTTTGTCCAGACAGCTCCCTTAGCGTTGCCTGGAAAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAACCGACGGGATTGGGTaGGAGGAGGAGCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QAAMPALIGFCTKCVLETTDGIG*EEERGS
Trigger: GCTACCTCGCTCCTCCTCCCACCCAATCCCGTCGGT...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCGTCTTGTTGCTAATATaGATGAAGCCCTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPVLLLI*MKPSWV
Trigger: AACCCATGAGGGCTTCATCCATATTAGCAACAAGAC...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTCAGGCTTGCAGTAGTTaGGCGAGCCCGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLQACSS*ASPVAG
Trigger: CCCCGCAACCGGGCTCGCCCAACTACTGCAAGCCTG...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGGCTGGGCAGTCCTCGTaGGCAAGCGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGAGQSS*ASAAAA
Trigger: GGCAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGC...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGGGAGCGCTAAAGGATaGAGGGCAGGGTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRGSAKG*RAGSGE
Trigger: CTCCCCCGACCCTGCCCTCCATCCTTTAGCGCTCCC...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTTTGCTGAGGTGGACTTaGAGTGGGGGCTCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFLLRWT*SGGSRL
Trigger: TAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAA...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAGGTTGGTTGTCCTCCTaGGGTGAAGGATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASREGWLSS*GEGWEG
Trigger: GCCTTCCCATCCTTCACCCCAGGAGGACAACCAACC...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGTCATCCCAGGAATTCTaGGATAGGAGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: DKSVRALGIWVRNRPEALSSQEF*DRRSES
Trigger: GGACTCAGACCTCCTATCCCAGAATTCCTGGGATGA...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTTCATCCCAGGAATTCTaGGATAGGAGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTSSQEF*DRRSES
Trigger: GGACTCAGACCTCCTATCCCAGAATTCCTGGGATGA...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTGTTCAGGGAATTTGGTaGGGGTGTTTGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFVQGIW*GCLGWQ
Trigger: CTGCCACCCCAAACACCCCCACCAAATTCCCTGAAC...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTAGGTTTGAGAAGTGCTaGGACGCAGTTCAGGGAATT +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGRFEKC*DAVQGI
Trigger: AATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCT...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAGTTGTGGGAAGGATTTaGAGCATCCCAAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKVVGRI*SIPKAE
Trigger: TTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAAC...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAAGTCTGTTAGGGCTTTaGGGATATGGGTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: LGEGLVPWNCRQVAPILESLLGL*GYGCGT
Trigger: TGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGAGTCTGTTAGGGCTTTaGGGATATGGGTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: GMEGDSRGISCARARSSQSLLGL*GYGCGT
Trigger: TGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGAGCCAGGATAGGAGGTaGGAAATGATTTTCCACCCG +
Preference number: 4 (lower is better)
Translates to: DKSVRALGIWVRNRPEALSQDRR*EMIFHP
Trigger: CGGGTGGAAAATCATTTCCCACCTCCTATCCTGGCT...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGCCATCCACCCTCGGGTaGGGGGTTCCTGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGPSTLG*GVPEAV
Trigger: CACGGCCTCAGGAACCCCCCACCCGAGGGTGGATGG...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTAGCAGGGGGAGACGTTaGGAAGAGGTCAGTACCCTT +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFSRGRR*EEVSTL
Trigger: AAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCT...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTGCTGAACTCAAAAGCTaGGTACGTGTGGCGGACTGG +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFAELKS*VRVADW
Trigger: CCAGTCCGCCACACGTACCCAGCTTTTGAGTTCAGC...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTATGAGACGGAGCGATTaGCTCTTTCTAAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGMRRSD*LFLREQ
Trigger: CTGCTCTCTTAGAAAGAGCCAATCGCTCCGTCTCAT...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGCTAAGGGAGCTGTCTaGACAAAAGGTGTCTTGATC +
Preference number: 4 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPAKGAV*TKGVLI
Trigger: GATCAAGACACCTTTTGTCCAGACAGCTCCCTTAGC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGCCACCTCCACGTTGGTaGTGTTCTCCGGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSPPPRW*CSPEVP
Trigger: GGGCACCTCCGGAGAACATCACCAACGTGGAGGTGG...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTGAGGATCTGCCCGGTTaGTCTCAATCACCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFEDLPG*SQSPPP
Trigger: AGGAGGAGGTGATTGAGATCAACCGGGCAGATCCTC...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGACACGGCTTCCAGGCGTaGTGGGGCTCTTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRHGFQA*WGSCLP
Trigger: CGGAAGACAAGAGCCCCATCACGCCTGGAAGCCGTG...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGGTGCGGAACAGGCCTaGGGCTTTGGGGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRGAEQA*GFGGVQ
Trigger: TTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACC...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTATAGGAGGTGGGAAATaGTTTTCCACCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: APILEVLASREPGLDKSVIGGGK*FSTRER
Trigger: ACGCTCGCGGGTGGAAAATCATTTCCCACCTCCTAT...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAAGTCGGGGCCGCCAATaGGACGGAGCGATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRSRGRQ*DGAIGS
Trigger: AGAGCCAATCGCTCCGTCTCATTGGCGGCCCCGACT...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR GCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAAGCGCAGCTGCTaGCGGATCCCCATTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDGKRSC*RIPIGA
Trigger: CGCCCCAATGGGGATCCGGCAGCAGCTGCGCTTGCC...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGGCCCGGGGGTGTCTaGTGGCATCGTCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGGPGGV*WHRHLG
Trigger: ACCGAGATGACGATGCCAGCAGACACCCCCGGGCCC...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTGGAGGTCTGAGTCCATaGAGCAAGAATAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: APILEVLASREPGLDKSVGGLSP*SKNRGE
Trigger: CTCGCCTCTATTCTTGCTGCATGGACTCAGACCTCC...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTCAAAATGCCCCTTaGATAGGAATCGTTGCATCG +
Preference number: 4 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYTQNAP*IGIVAS
Trigger: CGATGCAACGATTCCTATGCAAGGGGCATTTTGAGT...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGGTGAGAGAAACTTATTaGTCTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGVRETY*SVCVCV
Trigger: CACACACACACACACAGAGCAATAAGTTTCTCTCAC...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTGTGAGAGAAACTTATTaGTCTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCVRETY*SVCVCV
Trigger: CACACACACACACACAGAGCAATAAGTTTCTCTCAC...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGGGTGGGGTGATGGGTaGCGGCGGGCTGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPGWGDG*RRADAP
Trigger: GGGGGCATCAGCCCGCCGCCACCCATCACCCCACCC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGCTGCCGGATCCCCATTaGGGCGAGGATCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGLPDPH*GEDLPG
Trigger: ACCGGGCAGATCCTCGCCCCAATGGGGATCCGGCAG...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGACCCGGGGGTGTCTGCTaGCATCGTCATCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRPGGVC*HRHLGC
Trigger: GCAACCGAGATGACGATGCCAGCAGACACCCCCGGG...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAATTGCTGAGGTGGACTTaGAGTGGGGGCTCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASRELLRWT*SGGSRL
Trigger: TAACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAA...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGTCATCCCAGGAATTCTaGGATAGGAGGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: CRQVAPILEVLASREPGLSSQEF*DRRSES
Trigger: GGACTCAGACCTCCTATCCCAGAATTCCTGGGATGA...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTCTCATGTCCTGGGAATaGAGGGAGATAGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: APILEVLASREPGLDKSVLMSWE*REIVGE
Trigger: TTCCCCGACTATCTCCCTCCATTCCCAGGACATGAG...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTCTCATGTCCTGGGAATaGAGGGAGATAGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFLMSWE*REIVGE
Trigger: TTCCCCGACTATCTCCCTCCATTCCCAGGACATGAG...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATAGGTTTGAGAAGTGCTaGGACGCAGTTCAGGGAATT +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHRFEKC*DAVQGI
Trigger: AATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCT...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGAGGTTTGAGAAGTGCTaGGACGCAGTTCAGGGAATT +
Preference number: 4 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQRFEKC*DAVQGI
Trigger: AATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCT...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGAGCTGGGTCAAGTCTTaGAGGTTTGAGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQSWVKS*RFEKCW
Trigger: CCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCT...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGAGCTGGGTCAAGTCTTaGAGGTTTGAGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSHVLGMEGDSRGISCARSWVKS*RFEKCW
Trigger: CCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCT...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATAAGAAATGTCAGTTGTaGGAAGGATTTGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNKKCQL*EGFGAS
Trigger: GGATGCTCCAAATCCTTCCCACAACTGACATTTCTT...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACAAATACAACCCTCTaGGAAACACTGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYTNTTL*ETLVSV
Trigger: CACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGT...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGCTCTGTGATCATCTGTaGACTACTTTAAATGGAAAC +
Preference number: 4 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGLCDHL*TTLNGN
Trigger: GTTTCCATTTAAAGTAGTCCACAGATGATCACAGAG...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATAGCCAGGATAGGAGGTaGGAAATGATTTTCCACCCG +
Preference number: 4 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHSQDRR*EMIFHP
Trigger: CGGGTGGAAAATCATTTCCCACCTCCTATCCTGGCT...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGAGTCTGGGACCGGTGTaGTCTCTGGGCTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSSLGPV*SLGLGE
Trigger: CTCCCCCAAGCCCAGAGACCACACCGGTCCCAGACT...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGGCAGAGGGAGGGAGGTaGCTAATTCCGTGGGACCCC +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSAEGGR*LIPWDP
Trigger: GGGGTCCCACGGAATTAGCCACCTCCCTCCCTCTGC...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGTCCCTGCCCTGCGGGTaGGCTGAGAAGACCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGSLPCG*AEKTRH
Trigger: ATGGCGGGTCTTCTCAGCCCACCCGCAGGGCAGGGA...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTAGGAAACGTTTATTTTaGTGGGGAGTGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTRKRLF*WGVRVG
Trigger: ACCCACCCTCACTCCCCACCAAAATAAACGTTTCCT...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGTGTGGCTGGGAGGAGTaGGGCGGGCACTCTAACGCG +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGCGWEE*GGHSNA
Trigger: CGCGTTAGAGTGCCCGCCCCACTCCTCCCAGCCACA...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp GTGGCTTTTCCAGGCAACGCTAAGGGAGCTGTCTGGACAAAAGGTGTCTTGATCCAGCAACAGTGTGTGTaGTTTCTGCAAAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VAFPGNAKGAVWTKGVLIQQQCV*FLQSLG
Trigger: CCCCAGGCTTTGCAGAAACCACACACACTGTTGCTG...GATCAAGACACCTTTTGTCCAGACAGCTCCCTTAGCGTTGCCTGGAAAAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGGGAGAGGAACCAAACTaGTTGGCCTGGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSGEEPN*LAWGRW
Trigger: CCACCTCCCCCAGGCCAATCAGTTTGGTTCCTCTCC...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGCCACCTCCACGTTGGTaGTGTTCTCCGGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGPPPRW*CSPEVP
Trigger: GGGCACCTCCGGAGAACATCACCAACGTGGAGGTGG...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTCTTATTTACACAAGTTaGTGGCAGGGGGATGTCCTA +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTLIYTS*WQGDVL
Trigger: TAGGACATCCCCCTGCCATCAACTTGTGTAAATAAG...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGCTTATTTACACAAGTTaGTGGCAGGGGGATGTCCTA +
Preference number: 4 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQLIYTS*WQGDVL
Trigger: TAGGACATCCCCCTGCCATCAACTTGTGTAAATAAG...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTGGGGGAAGGGGCGGATaGGAGGGTGAAATTCACCAG +
Preference number: 4 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLGGRGG*EGEIHQ
Trigger: CTGGTGAATTTCACCCTCTCATCCGCCCCTTCCCCC...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACAAGTCTTGGAGGTTTaGGAAGTGCTGGGACGCAGT +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASREQVLEV*EVLGRS
Trigger: ACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTG...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGAGGCTGAATTTGAGCTaGAAAGAGCTGGGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWRLNLS*KELGQV
Trigger: GACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCT...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAAAACACTGGTGTCTGTaGAGAGGGTACCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASREKHWCL*RGYLWG
Trigger: GCCCCAAAGGTACCCTCTTCACAGACACCAGTGTTT...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGGAGGTAGCGCATCCTTaGGCCAGGATAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSEVAHP*ARIGGG
Trigger: CCCACCTCCTATCCTGGCTCAAGGATGCGCTACCTC...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCGCCCACATTTGAGTaGGAGAAACTTATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHPPTFE*EKLIAL
Trigger: CAGAGCAATAAGTTTCTCTCACTCAAATGTGGGCGG...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGGAATTGCAGACAGGTTaGGCCTATCTTGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GMEGDSRGISCARARSSQELQTG*AYLGSS
Trigger: AGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTC...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTACTCAAAATGCCCCTTaGATAGGAATCGTTGCATCG +
Preference number: 4 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTTQNAP*IGIVAS
Trigger: CGATGCAACGATTCCTATGCAAGGGGCATTTTGAGT...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATACTCAAAATGCCCCTTaGATAGGAATCGTTGCATCG +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHTQNAP*IGIVAS
Trigger: CGATGCAACGATTCCTATGCAAGGGGCATTTTGAGT...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGAGAGACCGACGGGATTaGGTGGGAGGAGGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGRDRRD*VGGGAR
Trigger: CCTCGCTCCTCCTCCCACCCAATCCCGTCGGTCTCT...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGCGAAGGCCACATACCTaGCAGCCCGCGACGAGTAGG +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGRRPHT*QPATSR
Trigger: CCTACTCGTCGCGGGCTGCCAGGTATGTGGCCTTCG...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGCCCGGGGGTGTCTGCTaGCATCGTCATCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGPGGVC*HRHLGC
Trigger: GCAACCGAGATGACGATGCCAGCAGACACCCCCGGG...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAGGCTTATTGCTGAGGTaGACTTGGAGTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QAAMPALIGFCTKCVLETGLLLR*TWSGGS
Trigger: GGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCC...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTAGCTCAACTCCGATCTaGGGCTTGGGTAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFSSTPI*GLGNCS
Trigger: GGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCT...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGGGGGATTGGGAGATGTaGCGTGCCAGGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSGDWEM*RARVSL
Trigger: GAGACTGACCCTGGCACGCCACATCTCCCAATCCCC...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGAGTGGGGAGGGAGGGTaGTTCAGGGAGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSSGEGG*FREPLC
Trigger: ACACAGAGGCTCCCTGAACCACCCTCCCTCCCCACT...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTACAGGCCTGAGGCTTTaGGGGTGTCCAAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFTGLRL*GCPRNV
Trigger: GACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGT...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATACAAATACAACCCTCTaGGAAACACTGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHTNTTL*ETLVSV
Trigger: CACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGT...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGTACGTGTGGCGGACTaGCGAGCAGGGGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGVRVAD*RAGGDV
Trigger: AACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTAC...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGAAAGCTGGGTACGTGTaGCGGACTGGCGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGKAGYV*RTGEQG
Trigger: CCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTT...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGACGGCAGCTTCTGCATTaGGCGGTTCATGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRRQLLH*AVHAPR
Trigger: CCTGGGTGCATGAACCGCCCAATGCAGAAGCTGCCG...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGAGGAAACGTTTATTTTaGTGGGGAGTGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LASREPGLDKSVRALGIWRKRLF*WGVRVG
Trigger: ACCCACCCTCACTCCCCACCAAAATAAACGTTTCCT...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CAA 72 bp AGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTaGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: RPEALGVSKKCQ*WEGFGASQRLN
Trigger: ATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGAAGGGGCATAGTCGGTaGGGAGGAAGCAGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGKGHSR*GGSRLG
Trigger: ACCGAGCCTGCTTCCTCCTCACCGACTATGCCCCTT...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGCTTATTTACACAAGTTaGTGGCAGGGGGATGTCCTA +
Preference number: 4 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQLIYTS*WQGDVL
Trigger: TAGGACATCCCCCTGCCATCAACTTGTGTAAATAAG...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCCAAGTCTTGGAGGTTTaGGAAGTGCTGGGACGCAGT +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTQVLEV*EVLGRS
Trigger: ACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTG...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTAGGCTGAATTTGAGCTaGAAAGAGCTGGGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFRLNLS*KELGQV
Trigger: GACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCT...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACGGGAACAGCCTCTGTaGTCATCTGTGGACTACTTT +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASREREQPL*SSVDYF
Trigger: AAAGTAGTCCACAGATGATCACAGAGGCTGTTCCCG...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATCCTCAAACCCGCGCATaGGGCCCCTGGCGGCTTATT +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDPQTRA*GPWRLI
Trigger: AATAAGCCGCCAGGGGCCGCATGCGCGGGTTTGAGG...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCTTGGGAGATGTGGCGTaGCAGGGTCAGTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTLGDVA*QGQSQN
Trigger: ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCTGGAGGTTTGAGAAGTaGTGGGACGCAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTWRFEK*WDAVQG
Trigger: TCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCA...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGGTGAGAGAAACTTATTaGTCTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GMEGDSRGISCARARSSQVRETY*SVCVCV
Trigger: CACACACACACACACAGAGCAATAAGTTTCTCTCAC...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGGTCTTGTTGCTAATATaGATGAAGCCCTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQVLLLI*MKPSWV
Trigger: AACCCATGAGGGCTTCATCCATATTAGCAACAAGAC...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTGGCTTATTGCTGAGGTaGACTTGGAGTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLGLLLR*TWSGGS
Trigger: GGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCC...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTGGTTGGTTGTCCTCCTaGGGTGAAGGATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLGWLSS*GEGWEG
Trigger: GCCTTCCCATCCTTCACCCCAGGAGGACAACCAACC...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GTGGCTTTTCCAGGCAACGCTAAGGGAGCTGTCTGGACAAAAGGTGTCTTGATCGTTGTGGGAAGGATTTaGAGCATCCCAAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VAFPGNAKGAVWTKGVLIVVGRI*SIPKAE
Trigger: TTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAAC...GATCAAGACACCTTTTGTCCAGACAGCTCCCTTAGCGTTGCCTGGAAAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGAGGGCTTTGGGGATATaGGTGCGGAACAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSRALGI*VRNRPE
Trigger: CTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAAGCCAGGATAGGAGGTaGGAAATGATTTTCCACCCG +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASRESQDRR*EMIFHP
Trigger: CGGGTGGAAAATCATTTCCCACCTCCTATCCTGGCT...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGTGGGTGGAATGCATGTaGGAGCAGCCAGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGWVECM*EQPAER
Trigger: CCTCTCCGCTGGCTGCTCCCACATGCATTCCACCCA...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR TCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGAGGATCTGCCCGGTTaGTCTCAATCACCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKREDLPG*SQSPPP
Trigger: AGGAGGAGGTGATTGAGATCAACCGGGCAGATCCTC...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGGCCCGCGATGCTGCTaGGGCTGCGGGATTTCTCGT +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPGPRCC*GCGISR
Trigger: ACGAGAAATCCCGCAGCCTCAGCAGCATCGCGGGCC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAGGAGGTCTGAGTCCATaGAGCAAGAATAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: QAAMPALIGFCTKCVLETGGLSP*SKNRGE
Trigger: CTCGCCTCTATTCTTGCTGCATGGACTCAGACCTCC...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACACTGGTTCCCTGGAATTaGAGACAGGTTGCGCCTATC +
Preference number: 4 (lower is better)
Translates to: QAAMPALIGFCTKCVLETLVPWN*RQVAPI
Trigger: GATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAG...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACACTAGCCAAGCAGCGATaGCTGCACTTATCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QAAMPALIGFCTKCVLETLAKQR*LHLSAS
Trigger: AGAAGCCGATAAGTGCAGGCATCGCTGCTTGGCTAG...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGCATTGGGCGGTTCATaGACCCAGGGTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPALGGS*TQGGRG
Trigger: CCCACGCCCACCCTGGGTGCATGAACCGCCCAATGC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGGGAGCGCTAAAGGATaGAGGGCAGGGTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPGSAKG*RAGSGE
Trigger: CTCCCCCGACCCTGCCCTCCATCCTTTAGCGCTCCC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTCTCCGATCTGGGGCTTaGGTAACTGTTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLLRSGA*VTVPPS
Trigger: GGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAG...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGAGTCGCAGGAGTGTGTaGGGATTGGGAGATGTGGCG +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGSRRSV*GLGDVA
Trigger: CGCCACATCTCCCAATCCCCACACACTCCTGCGACT...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAAGTTGTGGGAAGGATTTaGAGCATCCCAAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASREVVGRI*SIPKAE
Trigger: TTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAAC...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGAAGAAATGTCAGTTGTaGGAAGGATTTGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: CRQVAPILEVLASREPGLKKCQL*EGFGAS
Trigger: GGATGCTCCAAATCCTTCCCACAACTGACATTTCTT...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGAGGGTCTGGTTCCCTaGAATTGCAGACAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKREGLVP*NCRQVA
Trigger: CGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTC...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
3UTR CAA 72 bp TTTGAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTaGAGAAGTGCTGGGACGCAGTTCAGGGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: FELKRAGSSLGG*RSAGTQFREFG
Trigger: ACCAAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGCACGCCGCCCACGTTaGTCACGATCTTGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPARRPR*SRSCRC
Trigger: ACAGCGGCAAGATCGTGATCAACGTGGGCGGCGTGC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR TCA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACTTATTTACACAAGTTaGTGGCAGGGGGATGTCCTA +
Preference number: 4 (lower is better)
Translates to: PWNCRQVAPILEVLASRELIYTS*WQGDVL
Trigger: TAGGACATCCCCCTGCCATCAACTTGTGTAAATAAG...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCAGGCTGAATTTGAGCTaGAAAGAGCTGGGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTRLNLS*KELGQV
Trigger: GACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCT...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGAAACACTGGTGTCTGTaGAGAGGGTACCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSKHWCL*RGYLWG
Trigger: GCCCCAAAGGTACCCTCTTCACAGACACCAGTGTTT...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAATAGGAGGTGGGAAATaGTTTTCCACCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRIGGGK*FSTRER
Trigger: ACGCTCGCGGGTGGAAAATCATTTCCCACCTCCTAT...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATCGAATCCCACACTATTaGCTTGGGGGATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDRIPHY*LGGWGG
Trigger: CCCACCCCATCCCCCAAGTCAATAGTGTGGGATTCG...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCTCTCAGAATTCTGGGTaGAGGTCTCATGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TLNLNKPCPSQAAMPALISQNSG*RSHVLG
Trigger: TCCCAGGACATGAGACCTGCACCCAGAATTCTGAGA...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGGCTTCTGTACAAAATaGGTATTAGAGACAAAACTT +
Preference number: 4 (lower is better)
Translates to: VCGDWEMWRARVSLRILGGFCTK*VLETKL
Trigger: AAGTTTTGTCTCTAATACGCATTTTGTACAGAAGCC...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATAAGGCATGCAGTGTGTaGGGGGAGGTGCCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDKACSV*GEVPQD
Trigger: ATCTTGGGGCACCTCCCCCCACACACTGCATGCCTT...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCTTATTGCTGAGGTaGACTTGGAGTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDGLLLR*TWSGGS
Trigger: GGAGCCCCCACTCCAAGTCCACCTCAGCAATAAGCC...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGTTCAGGGAATTTGGTaGGGGTGTTTGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGVQGIW*GCLGWQ
Trigger: CTGCCACCCCAAACACCCCCACCAAATTCCCTGAAC...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGAGGGTCTGGTTCCCTaGAATTGCAGACAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGEGLVP*NCRQVA
Trigger: CGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTC...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCAGGAAACGTTTATTTTaGTGGGGAGTGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTRKRLF*WGVRVG
Trigger: ACCCACCCTCACTCCCCACCAAAATAAACGTTTCCT...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTTCAATCACCTCCTCCTaGGCCAACGGGCAAGGCTCG +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPSITSS*ANGQGS
Trigger: CGAGCCTTGCCCGTTGGCTCAGGAGGAGGTGATTGA...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR TCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTAAGGGGCATAGTCGGTaGGGAGGAAGCAGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPKGHSR*GGSRLG
Trigger: ACCGAGCCTGCTTCCTCCTCACCGACTATGCCCCTT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGGCGGATGAGAGGGTaGAATTCACCAGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGGRMRG*NSPEEF
Trigger: GAATTCCTCTGGTGAATTTCACCCTCTCATCCGCCC...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGAAACACTGGTGTCTGTaGAGAGGGTACCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGKHWCL*RGYLWG
Trigger: GCCCCAAAGGTACCCTCTTCACAGACACCAGTGTTT...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGGTCAGTCAACATCGATaGGAAAGGGGGAGACATCGG +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGVSQHR*ERGRHR
Trigger: CCGATGTCTCCCCCTTTCTCATCGATGTTGACTGAC...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGGGATCGGGGAGGCCTaGGTCACCGTCTTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPGIGEA*VTVLLL
Trigger: TAGCAACAAGACGGTGACCCAGGCCTCCCCGATCCC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTAAACTCCACCTTGTCTaGGCAGAAGGTGATGCGCAT +
Preference number: 4 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLKLHLV*AEGDAH
Trigger: ATGCGCATCACCTTCTGCCCAGACAAGGTGGAGTTT...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATCAACGCACAGGGTTaGTTGTCCTCCTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGINAQG*LSSWGE
Trigger: TTCACCCCAGGAGGACAACCAACCCTGTGCGTTGAT...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGCTCATGTCCTGGGAATaGAGGGAGATAGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGLMSWE*REIVGE
Trigger: TTCCCCGACTATCTCCCTCCATTCCCAGGACATGAG...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTAAGAAATGTCAGTTGTaGGAAGGATTTGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: ARGCLLASSSRLHIINDFKKCQL*EGFGAS
Trigger: GGATGCTCCAAATCCTTCCCACAACTGACATTTCTT...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCACAAATACAACCCTCTaGGAAACACTGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTTNTTL*ETLVSV
Trigger: CACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGT...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATCTGCCGGATCCCCATTaGGGCGAGGATCAATTACAG +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDLPDPH*GEDQLQ
Trigger: CTGTAATTGATCCTCGCCCCAATGGGGATCCGGCAG...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474951.1
CDS-3UTR TCA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGCCGCCCACATTTGAGTaGGAGAAACTTATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSPPTFE*EKLIAL
Trigger: CAGAGCAATAAGTTTCTCTCACTCAAATGTGGGCGG...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATACAGGCCTGAGGCTTTaGGGGTGTCCAAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDTGLRL*GCPRNV
Trigger: GACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGT...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTCAGTGGCTTTTCGGATaGAGCCATCAGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPQWLFG*SHQGKG
Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGCCACTG...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
3UTR CAA 72 bp GATGTAACTGGCATAATTTGGACTTATTTACACAAGTaGATGGCAGGGGGATGTCCTATGGCTCGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: DVTGIIWTYLHK*MAGGCPMARGD
Trigger: GTCTCCACGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATCGGGAACAGCCTCTGTaGTCATCTGTGGACTACTTT +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDREQPL*SSVDYF
Trigger: AAAGTAGTCCACAGATGATCACAGAGGCTGTTCCCG...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGCCGCCCACATTTGAGTaGGAGAAACTTATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGPPTFE*EKLIAL
Trigger: CAGAGCAATAAGTTTCTCTCACTCAAATGTGGGCGG...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCGTCTTGTTGCTAATATaGATGAAGCCCTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIVLLLI*MKPSWV
Trigger: AACCCATGAGGGCTTCATCCATATTAGCAACAAGAC...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGGTTGTGGGAAGGATTTaGAGCATCCCAAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGVVGRI*SIPKAE
Trigger: TTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAAC...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR TCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTAATTCTCCTAAAGGCTaGGGGAGCAGGTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPNSPKG*GSRSKA
Trigger: GGCTTTGGACCTGCTCCCTCAGCCTTTAGGAGAATT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGGAATTGCAGACAGGTTaGGCCTATCTTGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGELQTG*AYLGSS
Trigger: AGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTC...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCCTCTGTGATCATCTGTaGACTACTTTAAATGGAAAC +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTLCDHL*TTLNGN
Trigger: GTTTCCATTTAAAGTAGTCCACAGATGATCACAGAG...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR GCA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCGGCTTCTGTACAAAATaGGTATTAGAGACAAAACTT +
Preference number: 4 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTGFCTK*VLETKL
Trigger: AAGTTTTGTCTCTAATACGCATTTTGTACAGAAGCC...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAGCCCCAAGATGTAACTaGCATAATTTGGACTTATTT +
Preference number: 4 (lower is better)
Translates to: QAAMPALIGFCTKCVLETAPRCN*HNLDLF
Trigger: AAATAAGTCCAAATTATGCCAGTTACATCTTGGGGC...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR TCA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTAGGCTGAATTTGAGCTaGAAAGAGCTGGGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPRLNLS*KELGQV
Trigger: GACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCCCCAAGATGTAACTaGCATAATTTGGACTTATTT +
Preference number: 4 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRAPRCN*HNLDLF
Trigger: AAATAAGTCCAAATTATGCCAGTTACATCTTGGGGC...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGGCCCCAAGATGTAACTaGCATAATTTGGACTTATTT +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGAPRCN*HNLDLF
Trigger: AAATAAGTCCAAATTATGCCAGTTACATCTTGGGGC...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR GCA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGGGCTTCTGTACAAAATaGGTATTAGAGACAAAACTT +
Preference number: 4 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGGFCTK*VLETKL
Trigger: AAGTTTTGTCTCTAATACGCATTTTGTACAGAAGCC...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CCA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGCCCCAAGATGTAACTaGCATAATTTGGACTTATTT +
Preference number: 4 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDAPRCN*HNLDLF
Trigger: AAATAAGTCCAAATTATGCCAGTTACATCTTGGGGC...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS GCA 90 bp GGCGGCGGCGGGGACTCGGGCGGCTGCGGCGGTGGCGCCGGCTGCTaGTTGCTGGCCCCCTGGCGCCCGCGGAAGGACGAGACGCAGACT +
Preference number: 5 (lower is better)
Translates to: GGGGDSGGCGGGAGC*LLAPWRPRKDETQT
Trigger: AGTCTGCGTCTCGTCCTTCCGCGGGCGCCAGGGGGCCAGCAAGCAGCAGCCGGCGCCACCGCCGCAGCCGCCCGAGTCCCCGCCGCCGCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS CCA 90 bp CGTCGTCCAGGCCTCCGTCGTGGGCGCCTGCGGCGTTGGCGGCGTTaGCGGCGCCCGCGGGGTCGGGCGCCTCGAAGGAGTCGAGCGCCT +
Preference number: 5 (lower is better)
Translates to: RRPGLRRGRLRRWRR*RRPRGRAPRRSRAP
Trigger: AGGCGCTCGACTCCTTCGAGGCGCCCGACCCCGCGGGCGCCGCCAACGCCGCCAACGCCGCAGGCGCCCACGACGGAGGCCTGGACGACG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGACGTCTTTGGCGGCCTaGGAGCTGAGGCCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPTSLAA*ELRPER
Trigger: CCTCTCGGGCCTCAGCTCCAAGGCCGCCAAAGACGT...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS TCA 90 bp GGAAGCAGGCTCGGTCCCGGCTATAGCGGCCACGGCTTCCAGGCGTaGTGGGGCTCTTGTCTTCCGGGGACATGGCAGGCTGGTCAATGG +
Preference number: 5 (lower is better)
Translates to: GSRLGPGYSGHGFQA*WGSCLPGTWQAGQW
Trigger: CCATTGACCAGCCTGCCATGTCCCCGGAAGACAAGAGCCCCATCACGCCTGGAAGCCGTGGCCGCTATAGCCGGGACCGAGCCTGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS CCA 90 bp CTTCCAGGCGTGATGGGGCTCTTGTCTTCCGGGGACATGGCAGGCTaGTCAATGGCTGGGCAGTCCTCGTGGGCAAGCGCAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LPGVMGLLSSGDMAG*SMAGQSSWASAAAA
Trigger: GGCAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGCCATTGACCAGCCTGCCATGTCCCCGGAAGACAAGAGCCCCATCACGCCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCGCACGCCGCCCACGTaGATCACGATCTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYRTPPT*ITILPL
Trigger: CAGCGGCAAGATCGTGATCAACGTGGGCGGCGTGCG...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACGTTGGGCGAGCCCGGTaGCGGGGGCCGGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDVGRAR*RGPGDV
Trigger: CACATCCCCCGGCCCCCGCAACCGGGCTCGCCCAAC...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATGCTGCCGGATCCCCATaGGGGCGAGGATCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNAAGSP*GRGSAR
Trigger: CCGGGCAGATCCTCGCCCCAATGGGGATCCGGCAGC...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp GAAAAGGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCGCTGCCGGATCCCCATaGGGGCGAGGATCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: EKGEPDLERVPLARSLPPAAGSP*GRGSAR
Trigger: CCGGGCAGATCCTCGCCCCAATGGGGATCCGGCAGC...GGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCCTTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGATCCAGGCCGCGGCGTaGGCGTTGAGGTCGGGCAAG +
Preference number: 5 (lower is better)
Translates to: RALGIWVRNRPEALGVSKIQAAA*ALRSGK
Trigger: CTTGCCCGACCTCAACGCCAACGCCGCGGCCTGGAT...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGGAGAGACCGACGGGATaGGGTGGGAGGAGGAGCGAG +
Preference number: 5 (lower is better)
Translates to: RALGIWVRNRPEALGVSKERPTG*GGRRSE
Trigger: CTCGCTCCTCCTCCCACCCAATCCCGTCGGTCTCTC...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGGAAGCAGAGGCGCTaGAGCTCGCCGCCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKWKQRR*SSPPAP
Trigger: CGGAGCGGGCGGCGAGCTCAAGCGCCTCTGCTTCCA...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGTGGAAGCAGAGGCGCTaGAGCTCGCCGCCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVWKQRR*SSPPAP
Trigger: CGGAGCGGGCGGCGAGCTCAAGCGCCTCTGCTTCCA...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGTTGGGCGAGCCCGGTaGCGGGGGCCGGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: RSHVLGMEGDSRGISCARVGRAR*RGPGDV
Trigger: CACATCCCCCGGCCCCCGCAACCGGGCTCGCCCAAC...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCGCTGCCGGATCCCCATaGGGGCGAGGATCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: EMWRARVSLRILGAGLMSAAGSP*GRGSAR
Trigger: CCGGGCAGATCCTCGCCCCAATGGGGATCCGGCAGC...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GCGAAGCTGGCAGTGCCCTTGGGGAATCCGATGAGAACTCCAGGAGCAGTGGGGGCGGCAGCTTCTGCATaGGGCGGTTCATGCACCCAG +
Preference number: 5 (lower is better)
Translates to: AKLAVPLGNPMRTPGAVGAAASA*GGSCTQ
Trigger: CTGGGTGCATGAACCGCCCAATGCAGAAGCTGCCGC...CCCCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp GGGTGGAATGCATGTGGGAGCAGCCAGCGGAGAGGGCAGGGAACGGTGCGGCCGTGGACAAAAGGTGTCTaGATCGTAGGAGGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: GWNACGSSQRRGQGTVRPWTKGV*IVGGRA
Trigger: AGCCCTCCCTCCTACGATCAAGACACCTTTTGTCCA...CGGCCGCACCGTTCCCTGCCCTCTCCGCTGGCTGCTCCCACATGCATTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp CTTGGGGAGGGTCTGGTTCCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAATGGAAGCAGAGGCGCTaGAGCTCGCCGCCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: LGEGLVPWNCRQVAPILEWKQRR*SSPPAP
Trigger: CGGAGCGGGCGGCGAGCTCAAGCGCCTCTGCTTCCA...TTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGACCCTCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGACGTCTTTGGCGGCCTaGGAGCTGAGGCCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGTSLAA*ELRPER
Trigger: CCTCTCGGGCCTCAGCTCCAAGGCCGCCAAAGACGT...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCGTGTGGTCTCTGGGCTaGGGGGAGGTAGCGCATCCT +
Preference number: 5 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPVWSLG*GEVAHP
Trigger: AGGATGCGCTACCTCCCCCAAGCCCAGAGACCACAC...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTGGCGTGATGGGGCTCTaGTCTTCCGGGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCGVMGL*SSGDMA
Trigger: TGCCATGTCCCCGGAAGACAAGAGCCCCATCACGCC...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATGAGCAGGGGGAGACGTaGGGAAGAGGTCAGTACCCT +
Preference number: 5 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNEQGET*GRGQYP
Trigger: AGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTC...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCGAGCAGGGGGAGACGTaGGGAAGAGGTCAGTACCCT +
Preference number: 5 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPEQGET*GRGQYP
Trigger: AGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTC...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCACGTCTTTGGCGGCCTaGGAGCTGAGGCCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLTSLAA*ELRPER
Trigger: CCTCTCGGGCCTCAGCTCCAAGGCCGCCAAAGACGT...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACGGCGTGATGGGGCTCTaGTCTTCCGGGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDGVMGL*SSGDMA
Trigger: TGCCATGTCCCCGGAAGACAAGAGCCCCATCACGCC...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp AGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGGCCCCTGGCGGCTTATaGCTGAGGTGGACTTGGAGT +
Preference number: 5 (lower is better)
Translates to: SLLGLWGYGCGTGLRLWGAPGGL*LRWTWS
Trigger: ACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGC...CCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCCGCAGTTCAGGGAATTaGGTGGGGGTGTTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPRSSGN*VGVFGV
Trigger: CACCCCAAACACCCCCACCAAATTCCCTGAACTGCG...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATGGAGGTAGCGCATCCTaGAGCCAGGATAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNGGSAS*SQDRRW
Trigger: CCACCTCCTATCCTGGCTCAAGGATGCGCTACCTCC...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGAGAGGTCAGTACCCTTaGGAAAAGACCCTCACCCCC +
Preference number: 5 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGRGQYP*EKTLTP
Trigger: GGGGGTGAGGGTCTTTTCCAAAGGGTACTGACCTCT...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GCGAAGCTGGCAGTGCCCTTGGGGAATCCGATGAGAACTCCAGGAGCAGTGGGGAGAGGTCAGTACCCTTaGGAAAAGACCCTCACCCCC +
Preference number: 5 (lower is better)
Translates to: AKLAVPLGNPMRTPGAVGRGQYP*EKTLTP
Trigger: GGGGGTGAGGGTCTTTTCCAAAGGGTACTGACCTCT...CCCCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGGTGTGTGTGTGTGTGTaGGGGAGGGTGAGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVVCVCV*GRVSRG
Trigger: TCCGCGGCTCACCCTCCCCAACACACACACACACAC...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGTGTGTGTGTGTGTGTaGGGGAGGGTGAGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPVCVCV*GRVSRG
Trigger: TCCGCGGCTCACCCTCCCCAACACACACACACACAC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGGCCGCGGCGTTGGCGTaGAGGTCGGGCAAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQAAALA*RSGKKL
Trigger: AAGCTTCTTGCCCGACCTCAACGCCAACGCCGCGGC...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGGAGAGACCGACGGGATaGGGTGGGAGGAGGAGCGAG +
Preference number: 5 (lower is better)
Translates to: LASREPGLDKSVRALGIWERPTG*GGRRSE
Trigger: CTCGCTCCTCCTCCCACCCAATCCCGTCGGTCTCTC...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAATGTCAGTTGTGGGGGCCGGGGGATGTGTTaGTTCTTCTTCTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GCGTGLRLWGCPRNVSCGGRGMC*FFFLGS
Trigger: GCTGCCCAAGAAGAAGAACAAACACATCCCCCGGCC...CCCACAACTGACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGCGTGATGGGGCTCTaGTCTTCCGGGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWGVMGL*SSGDMA
Trigger: TGCCATGTCCCCGGAAGACAAGAGCCCCATCACGCC...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTGCCCCTGGCGGCTTATaGCTGAGGTGGACTTGGAGT +
Preference number: 5 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPAPGGL*LRWTWS
Trigger: ACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGC...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACGCCCCTGGCGGCTTATaGCTGAGGTGGACTTGGAGT +
Preference number: 5 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYAPGGL*LRWTWS
Trigger: ACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGC...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GCGAAGCTGGCAGTGCCCTTGGGGAATCCGATGAGAACTCCAGGAGCAGTGGGGTCTGGTTCCCTGGAATaGCAGACAGGTTGCGCCTAT +
Preference number: 5 (lower is better)
Translates to: AKLAVPLGNPMRTPGAVGSGSLE*QTGCAY
Trigger: ATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGA...CCCCACTGCTCCTGGAGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCGTGTGGTCTCTGGGCTaGGGGGAGGTAGCGCATCCT +
Preference number: 5 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLVWSLG*GEVAHP
Trigger: AGGATGCGCTACCTCCCCCAAGCCCAGAGACCACAC...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACAAGGAAACGTTTATTTaGGTGGGGAGTGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYKETFI*VGSEGG
Trigger: CCCACCCTCACTCCCCACCAAAATAAACGTTTCCTT...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACCGAGGATCTGCCCGGTaGATCTCAATCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYRGSAR*ISITSS
Trigger: GGAGGAGGTGATTGAGATCAACCGGGCAGATCCTCG...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAACGAGGATCTGCCCGGTaGATCTCAATCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKRGSAR*ISITSS
Trigger: GGAGGAGGTGATTGAGATCAACCGGGCAGATCCTCG...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCACCCCCAGCTCCTTaGACCTTCTTCCCGGTCACC +
Preference number: 5 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHPPPAP*TFFPVT
Trigger: GGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTGG...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACAACGCACAGGGTTGGTaGTCCTCCTGGGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDNAQGW*SSWGEG
Trigger: TCCTTCACCCCAGGAGGACAACCAACCCTGTGCGTT...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCCGCAGTTCAGGGAATTaGGTGGGGGTGTTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: EMWRARVSLRILGAGLMSRSSGN*VGVFGV
Trigger: CACCCCAAACACCCCCACCAAATTCCCTGAACTGCG...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAGTCTGTTAGGGCTTaGGGGATATGGGTGCGGAAC +
Preference number: 5 (lower is better)
Translates to: RALGIWVRNRPEALGVSKKSVRA*GIWVRN
Trigger: GTTCCGCACCCATATCCCCAAAGCCCTAACAGACTT...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCAGCCGAGCTGGGTGTaGTCGGTTCCCAATCTTCTG +
Preference number: 5 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDQPSWV*SVPNLL
Trigger: CAGAAGATTGGGAACCGACAACACCCAGCTCGGCTG...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATCCGCCCCGCCCACATTaGAGTGAGAGAAACTTATTG +
Preference number: 5 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNPPRPH*SERNLL
Trigger: CAATAAGTTTCTCTCACTCAAATGTGGGCGGGGCGG...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATGCCTGGGTCACCGTCTaGTTGCTAATATGGATGAAG +
Preference number: 5 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNAWVTV*LLIWMK
Trigger: CTTCATCCATATTAGCAACAAGACGGTGACCCAGGC...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp AAAAGCTGGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTTAAGAAACTCCACCTaGTCTGGGCAGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: KSWVRVADWRAGGDVGKRLRNST*SGQKVM
Trigger: CATCACCTTCTGCCCAGACAAGGTGGAGTTTCTTAA...CCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCCAGCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGCCGGGGGATGTGTTaGTTCTTCTTCTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: DKSVRALGIWVRNRPEALGRGMC*FFFLGS
Trigger: GCTGCCCAAGAAGAAGAACAAACACATCCCCCGGCC...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGGCCCCTGGCGGCTTATaGCTGAGGTGGACTTGGAGT +
Preference number: 5 (lower is better)
Translates to: LASREPGLDKSVRALGIWAPGGL*LRWTWS
Trigger: ACTCCAAGTCCACCTCAGCAATAAGCCGCCAGGGGC...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCAAGTCTTGGAGGTTaGAGAAGTGCTGGGACGCAG +
Preference number: 5 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNSSLGG*RSAGTQ
Trigger: CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGA...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTTCAAGTCTTGGAGGTTaGAGAAGTGCTGGGACGCAG +
Preference number: 5 (lower is better)
Translates to: LLGLWGYGCGTGLRLWGCSSLGG*RSAGTQ
Trigger: CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGA...ACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATCAGGTTGCGCCTATCTaGGAAGTTCTAGCATCAAGG +
Preference number: 5 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNQVAPI*EVLASR
Trigger: CCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTG...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGGTGAAGAGGGTACCTTaGGGGCACCATCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVVKRVP*GHHLRE
Trigger: TTCCCTGAGATGGTGCCCCAAAGGTACCCTCTTCAC...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCAGAGTTGGACGATTaGCAGACCTCCCCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHPELDD*QTSPPH
Trigger: GTGGGGAGGGGAGGTCTGCAAATCGTCCAACTCTGG...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGCCAGAGTTGGACGATTaGCAGACCTCCCCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQPELDD*QTSPPH
Trigger: GTGGGGAGGGGAGGTCTGCAAATCGTCCAACTCTGG...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATAAGGAAACGTTTATTTaGGTGGGGAGTGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNKETFI*VGSEGG
Trigger: CCCACCCTCACTCCCCACCAAAATAAACGTTTCCTT...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GGGTACGTGTGGCGGACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACACACAGTCGATGATGTaGAGGCTGCTTTTAAGAAAC +
Preference number: 5 (lower is better)
Translates to: GYVWRTGEQGETLGRGQYTQSMM*RLLLRN
Trigger: GTTTCTTAAAAGCAGCCTCAACATCATCGACTGTGT...GTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTCCGCCACACGTACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGTTGGGCGAGCCCGGTaGCGGGGGCCGGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDVGRAR*RGPGDV
Trigger: CACATCCCCCGGCCCCCGCAACCGGGCTCGCCCAAC...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTGGCGTGATGGGGCTCTaGTCTTCCGGGGACATGGCA +
Preference number: 5 (lower is better)
Translates to: ARGCLLASSSRLHIINDFGVMGL*SSGDMA
Trigger: TGCCATGTCCCCGGAAGACAAGAGCCCCATCACGCC...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGATTGCTGAGGTGGACTaGGAGTGGGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: RSHVLGMEGDSRGISCARIAEVD*EWGLQV
Trigger: AACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAAT...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATATTGCTGAGGTGGACTaGGAGTGGGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHIAEVD*EWGLQV
Trigger: AACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAAT...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGAACGCACAGGGTTGGTaGTCCTCCTGGGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: RSHVLGMEGDSRGISCARNAQGW*SSWGEG
Trigger: TCCTTCACCCCAGGAGGACAACCAACCCTGTGCGTT...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGACTCCGATCTGGGGCTaGGGTAACTGTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWTPIWG*GNCSSF
Trigger: GAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGT...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATCCCAGACTCCGATCTGGGGCTaGGGTAACTGTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GMEGDSRGISCARARSSQTPIWG*GNCSSF
Trigger: GAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGT...CTGGGATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACTCAAGTCTTGGAGGTTaGAGAAGTGCTGGGACGCAG +
Preference number: 5 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYSSLGG*RSAGTQ
Trigger: CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGA...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACAACAGGCCTGAGGCTTaGGGGGTGTCCAAGAAATGT +
Preference number: 5 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYNRPEA*GVSKKC
Trigger: ACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTT...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATCAGGTTGCGCCTATCTaGGAAGTTCTAGCATCAAGG +
Preference number: 5 (lower is better)
Translates to: RRSVWGLGDVACQGQSQNQVAPI*EVLASR
Trigger: CCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTG...ATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACACTCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp TGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCCTTCTGGTTCCCTGGAATaGCAGACAGGTTGCGCCTAT +
Preference number: 5 (lower is better)
Translates to: WRAGGDVGKRSVPFGKDPSGSLE*QTGCAY
Trigger: ATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGA...AGGGTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CTGTGTGCAGAGGTTAAGTCGCAGGAGTGTGTGGGGATTGGGAGATGTGGCGTGTCTGGTTCCCTGGAATaGCAGACAGGTTGCGCCTAT +
Preference number: 5 (lower is better)
Translates to: LCAEVKSQECVGIGRCGVSGSLE*QTGCAY
Trigger: ATAGGCGCAACCTGTCTGCAATTCCAGGGAACCAGA...CACGCCACATCTCCCAATCCCCACACACTCCTGCGACTTAACCTCTGCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGCAGCCGAGCTGGGTGTaGTCGGTTCCCAATCTTCTG +
Preference number: 5 (lower is better)
Translates to: RSHVLGMEGDSRGISCARQPSWV*SVPNLL
Trigger: CAGAAGATTGGGAACCGACAACACCCAGCTCGGCTG...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGTTCAGGGAATTTGGAGGTAGCGCATCCTaGAGCCAGGATAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: AGSSLGGLRSAGTQFREFGGSAS*SQDRRW
Trigger: CCACCTCCTATCCTGGCTCAAGGATGCGCTACCTCC...AAATTCCCTGAACTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GGGGGAGCCGGACTTGGAAAGAGTCCCTTTAGCTCGCTCTCTCCCTCCCCGAATGACTCAAAATGCCCCTaGCATAGGAATCGTTGCATC +
Preference number: 5 (lower is better)
Translates to: GGAGLGKSPFSSLSPSPNDSKCP*HRNRCI
Trigger: GATGCAACGATTCCTATGCAAGGGGCATTTTGAGTC...ATTCGGGGAGGGAGAGAGCGAGCTAAAGGGACTCTTTCCAAGTCCGGCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATGTCCCCGCCCCGCCCACATTaGAGTGAGAGAAACTTATTG +
Preference number: 5 (lower is better)
Translates to: EMWRARVSLRILGAGLMSPPRPH*SERNLL
Trigger: CAATAAGTTTCTCTCACTCAAATGTGGGCGGGGCGG...GGACATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTCCAGAGTTGGACGATTaGCAGACCTCCCCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: APILEVLASREPGLDKSVPELDD*QTSPPH
Trigger: GTGGGGAGGGGAGGTCTGCAAATCGTCCAACTCTGG...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp TTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTGCAGGTCTCATAAGCTGGCAGTGCCCTaGGGGAATCCGATGAGAACT +
Preference number: 5 (lower is better)
Translates to: LGDVACQGQSQNSGCRSHKLAVP*GNPMRT
Trigger: AGTTCTCATCGGATTCCCCAAGGGCACTGCCAGCTT...ATGAGACCTGCACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTTGGGTCACCGTCTTGTaGCTAATATGGATGAAGCCC +
Preference number: 5 (lower is better)
Translates to: VCGDWEMWRARVSLRILGWVTVL*LIWMKP
Trigger: GGGCTTCATCCATATTAGCAACAAGACGGTGACCCA...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTATTGCTGAGGTGGACTaGGAGTGGGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: APILEVLASREPGLDKSVIAEVD*EWGLQV
Trigger: AACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAAT...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CCAGCCGAGCTGGGTGTTGTCGGTTCCCAATCTTCTGATACTCCAGTGTTCCTCAAGTCTGTTAGGGCTTaGGGGATATGGGTGCGGAAC +
Preference number: 5 (lower is better)
Translates to: PAELGVVGSQSSDTPVFLKSVRA*GIWVRN
Trigger: GTTCCGCACCCATATCCCCAAAGCCCTAACAGACTT...GAGGAACACTGGAGTATCAGAAGATTGGGAACCGACAACACCCAGCTCGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GACTGGCGAGCAGGGGGAGACGTTGGGAAGAGGTCAGTACCCTTTGGAAAAGACCAGGTTGCGCCTATCTaGGAAGTTCTAGCATCAAGG +
Preference number: 5 (lower is better)
Translates to: DWRAGGDVGKRSVPFGKDQVAPI*EVLASR
Trigger: CCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTG...GTCTTTTCCAAAGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTCGCCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAGGAATTGCAGACAGGTaGCGCCTATCTTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKGIADR*RLSWKF
Trigger: GAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCC...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACGGAATTGCAGACAGGTaGCGCCTATCTTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: HLSSTPIWGLGNCSSFPYGIADR*RLSWKF
Trigger: GAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCC...GTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp TGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGAGAGGTCAGTACCCTTaGGAAAAGACCCTCACCCCC +
Preference number: 5 (lower is better)
Translates to: CRQVAPILEVLASREPGLRGQYP*EKTLTP
Trigger: GGGGGTGAGGGTCTTTTCCAAAGGGTACTGACCTCT...CAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GAGGTGGACTTGGAGTGGGGGCTCCAGGTTAGGGAAGGCATGCAGTGTGTGGGGAGTGAGAGAAACTTATaGCTCTGTGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: EVDLEWGLQVREGMQCVGSERNL*LCVCVC
Trigger: ACACACACACACACAGAGCAATAAGTTTCTCTCACT...CCCCACACACTGCATGCCTTCCCTAACCTGGAGCCCCCACTCCAAGTCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGCCGCCCCGCCCACATTaGAGTGAGAGAAACTTATTG +
Preference number: 5 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWPPRPH*SERNLL
Trigger: CAATAAGTTTCTCTCACTCAAATGTGGGCGGGGCGG...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCGCGGCAGCTTCTGCATaGGGCGGTTCATGCACCCAG +
Preference number: 5 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTAAASA*GGSCTQ
Trigger: CTGGGTGCATGAACCGCCCAATGCAGAAGCTGCCGC...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCGGATTAGGAGGCAGGTaGGTGCCCACCGAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIGLGGR*VPTEPP
Trigger: GGGAGGCTCGGTGGGCACCAACCTGCCTCCTAATCC...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp GCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTGCTGCCGGATCCCCATaGGGGCGAGGATCAATTACA +
Preference number: 5 (lower is better)
Translates to: APILEVLASREPGLDKSVAAGSP*GRGSIT
Trigger: TGTAATTGATCCTCGCCCCAATGGGGATCCGGCAGC...AACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAGAACTTCCAAGATAGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474951.1
CDS-3UTR CAA 90 bp TCAAGATCCAGCAACAGTGTGTGTGGTTTCTGCAAAGCCTGGGGCTGCCTGCAGTGGGTCACCGTCTTGTaGCTAATATGGATGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SRSSNSVCGFCKAWGCLQWVTVL*LIWMKP
Trigger: GGGCTTCATCCATATTAGCAACAAGACGGTGACCCA...CTGCAGGCAGCCCCAGGCTTTGCAGAAACCACACACACTGTTGCTGGATCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGCCTGGGTCACCGTCTaGTTGCTAATATGGATGAAG +
Preference number: 5 (lower is better)
Translates to: DKSVRALGIWVRNRPEALAWVTV*LLIWMK
Trigger: CTTCATCCATATTAGCAACAAGACGGTGACCCAGGC...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp AGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGACACAGTCGATGATGTaGAGGCTGCTTTTAAGAAAC +
Preference number: 5 (lower is better)
Translates to: RALGIWVRNRPEALGVSKTQSMM*RLLLRN
Trigger: GTTTCTTAAAAGCAGCCTCAACATCATCGACTGTGT...CTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCCCACCCCCAGCTCCTTaGACCTTCTTCCCGGTCACC +
Preference number: 5 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIPPPAP*TFFPVT
Trigger: GGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTGG...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGTCAAGTCTTGGAGGTTaGAGAAGTGCTGGGACGCAG +
Preference number: 5 (lower is better)
Translates to: RSHVLGMEGDSRGISCARSSLGG*RSAGTQ
Trigger: CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGA...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp AGGTCTCATGTCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGAACAGGCCTGAGGCTTaGGGGGTGTCCAAGAAATGT +
Preference number: 5 (lower is better)
Translates to: RSHVLGMEGDSRGISCARNRPEA*GVSKKC
Trigger: ACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTT...CCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGACATGAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CCCTGGAATTGCAGACAGGTTGCGCCTATCTTGGAAGTTCTAGCATCAAGGGAACAGCCGAGCTGGGTGTaGTCGGTTCCCAATCTTCTG +
Preference number: 5 (lower is better)
Translates to: PWNCRQVAPILEVLASREQPSWV*SVPNLL
Trigger: CAGAAGATTGGGAACCGACAACACCCAGCTCGGCTG...TTCCCTTGATGCTAGAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CGCCACCTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCAGTGAGAGAAACTTATaGCTCTGTGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: RHLSSTPIWGLGNCSSFPSERNL*LCVCVC
Trigger: ACACACACACACACAGAGCAATAAGTTTCTCTCACT...GGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAGGTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAGCGGCAGCTTCTGCATaGGGCGGTTCATGCACCCAG +
Preference number: 5 (lower is better)
Translates to: QAAMPALIGFCTKCVLETAAASA*GGSCTQ
Trigger: CTGGGTGCATGAACCGCCCAATGCAGAAGCTGCCGC...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGCGCACGCCGCCCACGTaGATCACGATCTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PRCNWHNLDLFTQVDGRGRTPPT*ITILPL
Trigger: CAGCGGCAAGATCGTGATCAACGTGGGCGGCGTGCG...CCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTTTAAGAAACTCCACCTaGTCTGGGCAGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTLRNST*SGQKVM
Trigger: CATCACCTTCTGCCCAGACAAGGTGGAGTTTCTTAA...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTCCACCCCCAGCTCCTTaGACCTTCTTCCCGGTCACC +
Preference number: 5 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLPPPAP*TFFPVT
Trigger: GGTGACCGGGAAGAAGGTCAAAGGAGCTGGGGGTGG...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GTGTGTGGGGATTGGGAGATGTGGCGTGCCAGGGTCAGTCTCAGAATTCTGGGTACTTATTTACACAAGTaGATGGCAGGGGGATGTCCT +
Preference number: 5 (lower is better)
Translates to: VCGDWEMWRARVSLRILGTYLHK*MAGGCP
Trigger: AGGACATCCCCCTGCCATCAACTTGTGTAAATAAGT...ACCCAGAATTCTGAGACTGACCCTGGCACGCCACATCTCCCAATCCCCACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACAGGAGGTAGCGCATCCTaGAGCCAGGATAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: QAAMPALIGFCTKCVLETGGSAS*SQDRRW
Trigger: CCACCTCCTATCCTGGCTCAAGGATGCGCTACCTCC...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CTGAGCTCAACTCCGATCTGGGGCTTGGGTAACTGTTCCTCCTTCCCCTACACTGACTCAAAATGCCCCTaGCATAGGAATCGTTGCATC +
Preference number: 5 (lower is better)
Translates to: LSSTPIWGLGNCSSFPYTDSKCP*HRNRCI
Trigger: GATGCAACGATTCCTATGCAAGGGGCATTTTGAGTC...AGTGTAGGGGAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGTTGAGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATAAGGAAACGTTTATTTaGGTGGGGAGTGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHKETFI*VGSEGG
Trigger: CCCACCCTCACTCCCCACCAAAATAAACGTTTCCTT...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CTAGCATCAAGGGAACCTGGGCTGGACAAGTCTGTTAGGGCTTTGGGGATATGGTTAAGAAACTCCACCTaGTCTGGGCAGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: LASREPGLDKSVRALGIWLRNST*SGQKVM
Trigger: CATCACCTTCTGCCCAGACAAGGTGGAGTTTCTTAA...CCATATCCCCAAAGCCCTAACAGACTTGTCCAGCCCAGGTTCCCTTGATGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCCGAGGATCTGCCCGGTaGATCTCAATCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TLNLNKPCPSQAAMPALIRGSAR*ISITSS
Trigger: GGAGGAGGTGATTGAGATCAACCGGGCAGATCCTCG...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp GACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGACTTATTTACACAAGTaGATGGCAGGGGGATGTCCT +
Preference number: 5 (lower is better)
Translates to: DKSVRALGIWVRNRPEALTYLHK*MAGGCP
Trigger: AGGACATCCCCCTGCCATCAACTTGTGTAAATAAGT...CAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp ACAAGTCTGTTAGGGCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGACTTATTTACACAAGTaGATGGCAGGGGGATGTCCT +
Preference number: 5 (lower is better)
Translates to: TSLLGLWGYGCGTGLRLWTYLHK*MAGGCP
Trigger: AGGACATCCCCCTGCCATCAACTTGTGTAAATAAGT...CCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGCCCTAACAGACTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp ACTCTTAACCTAAATAAACCGTGTCCTAGCCAAGCAGCGATGCCTGCACTTATCAACGCACAGGGTTGGTaGTCCTCCTGGGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: TLNLNKPCPSQAAMPALINAQGW*SSWGEG
Trigger: TCCTTCACCCCAGGAGGACAACCAACCCTGTGCGTT...GATAAGTGCAGGCATCGCTGCTTGGCTAGGACACGGTTTATTTAGGTTAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CAAAGGTACAAATACAACCCTCTGGGAAACACTGGTGTCTGTGAAGAGGGTACCACTCCGATCTGGGGCTaGGGTAACTGTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QRYKYNPLGNTGVCEEGTTPIWG*GNCSSF
Trigger: GAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGT...GGTACCCTCTTCACAGACACCAGTGTTTCCCAGAGGGTTGTATTTGTACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTAAGTCTGTTAGGGCTTaGGGGATATGGGTGCGGAAC +
Preference number: 5 (lower is better)
Translates to: ARGCLLASSSRLHIINDFKSVRA*GIWVRN
Trigger: GTTCCGCACCCATATCCCCAAAGCCCTAACAGACTT...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GTGGCTTTTCCAGGCAACGCTAAGGGAGCTGTCTGGACAAAAGGTGTCTTGATCGGAATTGCAGACAGGTaGCGCCTATCTTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: VAFPGNAKGAVWTKGVLIGIADR*RLSWKF
Trigger: GAACTTCCAAGATAGGCGCAACCTGTCTGCAATTCC...GATCAAGACACCTTTTGTCCAGACAGCTCCCTTAGCGTTGCCTGGAAAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGTGTGGTCTCTGGGCTaGGGGGAGGTAGCGCATCCT +
Preference number: 5 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGVWSLG*GEVAHP
Trigger: AGGATGCGCTACCTCCCCCAAGCCCAGAGACCACAC...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp TCCTGGGAATGGAGGGAGATAGTCGGGGAATTTCGTGTGCTAGGGCCAGATCATGACTCAAAATGCCCCTaGCATAGGAATCGTTGCATC +
Preference number: 5 (lower is better)
Translates to: SWEWREIVGEFRVLGPDHDSKCP*HRNRCI
Trigger: GATGCAACGATTCCTATGCAAGGGGCATTTTGAGTC...ATGATCTGGCCCTAGCACACGAAATTCCCCGACTATCTCCCTCCATTCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTCCATTAGCACCAGAGTaGGACGATTTGCAGACCTCC +
Preference number: 5 (lower is better)
Translates to: ARGCLLASSSRLHIINDFPLAPE*DDLQTS
Trigger: GGAGGTCTGCAAATCGTCCAACTCTGGTGCTAATGG...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GAGCTGAAAAGAGCTGGGTCAAGTCTTGGAGGTTTGAGAAGTGCTGGGACGCAGAATGAGACGGAGCGATaGGCTCTTTCTAAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: ELKRAGSSLGGLRSAGTQNETER*ALSKRA
Trigger: TGCTCTCTTAGAAAGAGCCAATCGCTCCGTCTCATT...CTGCGTCCCAGCACTTCTCAAACCTCCAAGACTTGACCCAGCTCTTTTCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS-3UTR CAA 90 bp ATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAGCTGGGTCAAGTCTTATTGCTGAGGTGGACTaGGAGTGGGGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: IWSIPKAEFELKRAGSSLIAEVD*EWGLQV
Trigger: AACCTGGAGCCCCCACTCCAAGTCCACCTCAGCAAT...AAGACTTGACCCAGCTCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGAGAGACCGACGGGATaGGGTGGGAGGAGGAGCGAG +
Preference number: 5 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPERPTG*GGRRSE
Trigger: CTCGCTCCTCCTCCCACCCAATCCCGTCGGTCTCTC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376959.6
ENST00000477616.2
CDS-3UTR CAA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGCCGGGGGATGTGTTaGTTCTTCTTCTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGGRGMC*FFFLGS
Trigger: GCTGCCCAAGAAGAAGAACAAACACATCCCCCGGCC...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GCTTTGGGGATATGGGTGCGGAACAGGCCTGAGGCTTTGGGGGTGTCCAAGAAAGCATCGTCATCTCGGTaGCATATTATTAATGACTTT +
Preference number: 5 (lower is better)
Translates to: ALGIWVRNRPEALGVSKKASSSR*HIINDF
Trigger: AAAGTCATTAATAATATGCAACCGAGATGACGATGC...TTTCTTGGACACCCCCAAAGCCTCAGGCCTGTTCCGCACCCATATCCCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGAACGCACAGGGTTGGTaGTCCTCCTGGGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGNAQGW*SSWGEG
Trigger: TCCTTCACCCCAGGAGGACAACCAACCCTGTGCGTT...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGGTGAAGAGGGTACCTTaGGGGCACCATCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSVKRVP*GHHLRE
Trigger: TTCCCTGAGATGGTGCCCCAAAGGTACCCTCTTCAC...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CAAGCAGCGATGCCTGCACTTATCGGCTTCTGTACAAAATGCGTATTAGAGACACCATTAGCACCAGAGTaGGACGATTTGCAGACCTCC +
Preference number: 5 (lower is better)
Translates to: QAAMPALIGFCTKCVLETPLAPE*DDLQTS
Trigger: GGAGGTCTGCAAATCGTCCAACTCTGGTGCTAATGG...TGTCTCTAATACGCATTTTGTACAGAAGCCGATAAGTGCAGGCATCGCTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATACTCCGATCTGGGGCTaGGGTAACTGTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDTPIWG*GNCSSF
Trigger: GAAGGAGGAACAGTTACCCAAGCCCCAGATCGGAGT...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGTGAAGAGGGTACCTTaGGGGCACCATCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDVKRVP*GHHLRE
Trigger: TTCCCTGAGATGGTGCCCCAAAGGTACCCTCTTCAC...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTGAGCAGGGGGAGACGTaGGGAAGAGGTCAGTACCCT +
Preference number: 5 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPEQGET*GRGQYP
Trigger: AGGGTACTGACCTCTTCCCAACGTCTCCCCCTGCTC...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATAAGTCTGTTAGGGCTTaGGGGATATGGGTGCGGAAC +
Preference number: 5 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDKSVRA*GIWVRN
Trigger: GTTCCGCACCCATATCCCCAAAGCCCTAACAGACTT...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATCCATTAGCACCAGAGTaGGACGATTTGCAGACCTCC +
Preference number: 5 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDPLAPE*DDLQTS
Trigger: GGAGGTCTGCAAATCGTCCAACTCTGGTGCTAATGG...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATTGGGTCACCGTCTTGTaGCTAATATGGATGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDWVTVL*LIWMKP
Trigger: GGGCTTCATCCATATTAGCAACAAGACGGTGACCCA...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GGAGGTGCCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGCCTGGGTCACCGTCTaGTTGCTAATATGGATGAAG +
Preference number: 5 (lower is better)
Translates to: GGAPRCNWHNLDLFTQVDAWVTV*LLIWMK
Trigger: CTTCATCCATATTAGCAACAAGACGGTGACCCAGGC...ATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGGCACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp GCCCGGGGGTGTCTGCTGGCATCGTCATCTCGGTTGCATATTATTAATGACTTTGCATCGTCATCTCGGTaGCATATTATTAATGACTTT +
Preference number: 5 (lower is better)
Translates to: ARGCLLASSSRLHIINDFASSSR*HIINDF
Trigger: AAAGTCATTAATAATATGCAACCGAGATGACGATGC...AAAGTCATTAATAATATGCAACCGAGATGACGATGCCAGCAGACACCCCCGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp TCAGTTGTGGGAAGGATTTGGAGCATCCCAAAGGCTGAATTTGAGCTGAAAAGAACACAGTCGATGATGTaGAGGCTGCTTTTAAGAAAC +
Preference number: 5 (lower is better)
Translates to: SVVGRIWSIPKAEFELKRTQSMM*RLLLRN
Trigger: GTTTCTTAAAAGCAGCCTCAACATCATCGACTGTGT...TCTTTTCAGCTCAAATTCAGCCTTTGGGATGCTCCAAATCCTTCCCACAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CATCTGTGGACTACTTTAAATGGAAACACTCTTAACCTAAATAAACCGTGTCCTAACAGGCCTGAGGCTTaGGGGGTGTCCAAGAAATGT +
Preference number: 5 (lower is better)
Translates to: HLWTTLNGNTLNLNKPCPNRPEA*GVSKKC
Trigger: ACATTTCTTGGACACCCCCAAAGCCTCAGGCCTGTT...AGGACACGGTTTATTTAGGTTAAGAGTGTTTCCATTTAAAGTAGTCCACAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGAGTGAGAGAAACTTATaGCTCTGTGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGSERNL*LCVCVC
Trigger: ACACACACACACACAGAGCAATAAGTTTCTCTCACT...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
CDS-3UTR CAA 90 bp CATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGGATGTCCTATGGCTCGGCATCGTCATCTCGGTaGCATATTATTAATGACTTT +
Preference number: 5 (lower is better)
Translates to: HNLDLFTQVDGRGMSYGSASSSR*HIINDF
Trigger: AAAGTCATTAATAATATGCAACCGAGATGACGATGC...CGAGCCATAGGACATCCCCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS-3UTR CAA 90 bp CCCCAAGATGTAACTGGCATAATTTGGACTTATTTACACAAGTTGATGGCAGGGGCATCGTCATCTCGGTaGCATATTATTAATGACTTT +
Preference number: 5 (lower is better)
Translates to: PQDVTGIIWTYLHKLMAGASSSR*HIINDF
Trigger: AAAGTCATTAATAATATGCAACCGAGATGACGATGC...CCCTGCCATCAACTTGTGTAAATAAGTCCAAATTATGCCAGTTACATCTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS CCA 72 bp TGCGGCGGTGGCGCCGGCTGCTGCTTGCTGGCCCCCTaGCGCCCGCGGAAGGACGAGACGCAGACTGAGCTC +
Preference number: 6 (lower is better)
Translates to: CGGGAGCCLLAP*RPRKDETQTEL
Trigger: GAGCTCAGTCTGCGTCTCGTCCTTCCGCGGGCGCCAGGGGGCCAGCAAGCAGCAGCCGGCGCCACCGCCGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS TCA 72 bp CTCGGTCCCGGCTATAGCGGCCACGGCTTCCAGGCGTaGTGGGGCTCTTGTCTTCCGGGGACATGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: LGPGYSGHGFQA*WGSCLPGTWQA
Trigger: AGCCTGCCATGTCCCCGGAAGACAAGAGCCCCATCACGCCTGGAAGCCGTGGCCGCTATAGCCGGGACCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS GCA 72 bp CGTCTCCACCTCCACGTTGGTGATGTTCTCCGGAGGTaGCCCGGGGATCGGGGAGGCCTGGGTCACCGTCTT +
Preference number: 6 (lower is better)
Translates to: RLHLHVGDVLRR*PGDRGGLGHRL
Trigger: AAGACGGTGACCCAGGCCTCCCCGATCCCCGGGGCACCTCCGGAGAACATCACCAACGTGGAGGTGGAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS GCA 72 bp AATGGCTGGGCAGTCCTCGTGGGCAAGCGCAGCTGCTaGCGGATCCCCATTGGGGCGAGGATCTGCCCGGTT +
Preference number: 6 (lower is better)
Translates to: NGWAVLVGKRSC*RIPIGARICPV
Trigger: AACCGGGCAGATCCTCGCCCCAATGGGGATCCGGCAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGCCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS CCA 72 bp GACATGGCAGGCTGGTCAATGGCTGGGCAGTCCTCGTaGGCAAGCGCAGCTGCTGCCGGATCCCCATTGGGG +
Preference number: 6 (lower is better)
Translates to: DMAGWSMAGQSS*ASAAAAGSPLG
Trigger: CCCCAATGGGGATCCGGCAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGCCATTGACCAGCCTGCCATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS CCA 72 bp CTTGTCTTCCGGGGACATGGCAGGCTGGTCAATGGCTaGGCAGTCCTCGTGGGCAAGCGCAGCTGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: LVFRGHGRLVNG*AVLVGKRSCCR
Trigger: CCGGCAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGCCATTGACCAGCCTGCCATGTCCCCGGAAGACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS CCA 72 bp CCTCGTGGGCAAGCGCAGCTGCTGCCGGATCCCCATTaGGGCGAGGATCAATTACAGCCACCCCCGACTGCC +
Preference number: 6 (lower is better)
Translates to: PRGQAQLLPDPH*GEDQLQPPPTA
Trigger: GGCAGTCGGGGGTGGCTGTAATTGATCCTCGCCCCAATGGGGATCCGGCAGCAGCTGCGCTTGCCCACGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474951.1
CDS TCA 72 bp CGAGGATCTGCCCGGTTGATCTCAATCACCTCCTCCTaGGCCAACGGGCAAGGCTCGCCGGGGGCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: RGSARLISITSS*ANGQGSPGAGR
Trigger: TCTGCCAGCCCCCGGCGAGCCTTGCCCGTTGGCTCAGGAGGAGGTGATTGAGATCAACCGGGCAGATCCTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS TCA 72 bp GGCGCAGGGACACCCCGCTCAGGCCCGCGATGCTGCTaGGGCTGCGGGATTTCTCGTAACCTTTTCGGATGG +
Preference number: 6 (lower is better)
Translates to: GAGTPRSGPRCC*GCGISRNLFGW
Trigger: CCATCCGAAAAGGTTACGAGAAATCCCGCAGCCTCAGCAGCATCGCGGGCCTGAGCGGGGTGTCCCTGCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000670667.1
CDS CCA 72 bp GGCTCTTGTCTTCCGGGGACATGGCAGGCTGGTCAATaGCTGGGCAGTCCTCGTGGGCAAGCGCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GSCLPGTWQAGQ*LGSPRGQAQLL
Trigger: CAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGCCATTGACCAGCCTGCCATGTCCCCGGAAGACAAGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS CCA 72 bp CTGGACGAGTCGGGGCCGCCAATGAGACGGAGCGATTaGCTCTTTCTAAGAGAGCAGGGAGGAGGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: LDESGPPMRRSD*LFLREQGGGAG
Trigger: CCCCGCCCCTCCTCCCTGCTCTCTTAGAAAGAGCCAATCGCTCCGTCTCATTGGCGGCCCCGACTCGTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS CAA 72 bp GCTGGACGAGTCGGGGCCGCCAATGAGACGGAGCGATaGGCTCTTTCTAAGAGAGCAGGGAGGAGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: AGRVGAANETER*ALSKRAGRRGG
Trigger: CCCGCCCCTCCTCCCTGCTCTCTTAGAAAGAGCCAATCGCTCCGTCTCATTGGCGGCCCCGACTCGTCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477616.2
CDS TCA 72 bp TTCGGATGGAGCCATCAGGGGAAGGGGCATAGTCGGTaGGGAGGAAGCAGGCTCGGTCCCGGCTATAGCGGC +
Preference number: 6 (lower is better)
Translates to: FGWSHQGKGHSR*GGSRLGPGYSG
Trigger: GCCGCTATAGCCGGGACCGAGCCTGCTTCCTCCTCACCGACTATGCCCCTTCCCCTGATGGCTCCATCCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376959.6
ENST00000474951.1
ENST00000477616.2
ENST00000670667.1
CDS CAA 72 bp TCCTCGTGGGCAAGCGCAGCTGCTGCCGGATCCCCATaGGGGCGAGGATCTGCCCGGTTGATCTCAATCACC +
Preference number: 6 (lower is better)
Translates to: SSWASAAAAGSP*GRGSARLISIT
Trigger: GGTGATTGAGATCAACCGGGCAGATCCTCGCCCCAATGGGGATCCGGCAGCAGCTGCGCTTGCCCACGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1
CDS GCA 72 bp AATGGCTGGGCAGTCCTCGTGGGCAAGCGCAGCTGCTaGCGGATCCCCATTGGGGCGAGGATCAATTACAGC +
Preference number: 6 (lower is better)
Translates to: NGWAVLVGKRSC*RIPIGARINYS
Trigger: GCTGTAATTGATCCTCGCCCCAATGGGGATCCGGCAGCAGCTGCGCTTGCCCACGAGGACTGCCCAGCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474951.1
CDS CAA 72 bp GGGTGGGTCAGGCTTGCAGTAGTTGGGCGAGCCCGGTaGCGGGGGCCGGGGGATGTGTTTGTTCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: GWVRLAVVGRAR*RGPGDVFVLLL
Trigger: AAGAAGAAGAACAAACACATCCCCCGGCCCCCGCAACCGGGCTCGCCCAACTACTGCAAGCCTGACCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376959.6
ENST00000477616.2
ENST00000670667.1