RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166006

Ensembl transcript IDs: ENST00000298972.5, ENST00000350228.6, ENST00000393288.2, ENST00000540018.5, ENST00000546456.1, ENST00000548243.1, ENST00000548513.5, ENST00000549446.6, ENST00000550433.5, ENST00000647764.1

Found 673 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCACCAGATGAGTTCCAGCCGCAGTTCTTTTATAAGCTTTAAGTaGCTCATGAAGACGCGAGGATCTCTTCCAAGTGCAACCTGGTCA +
Preference number: 1 (lower is better)
Translates to: EHQMSSSRSSFISFK*LMKTRGSLPSATWS
Trigger: TGACCAGGTTGCACTTGGAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGAACTCATCTGGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR GCA 90 bp TGCAGAACAGTCGACCAATGCTTTCATATCAGCAGGATGGTTCGATaGAAGTACACATATCCTGAGCTATCCACAGTCCCCGAACTCTGC +
Preference number: 1 (lower is better)
Translates to: CRTVDQCFHISRMVR*KYTYPELSTVPELC
Trigger: GCAGAGTTCGGGGACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATGAAAGCATTGGTCGACTGTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR GCA 90 bp GTGCCCTCCCTGCCCCACAATTCAACATGCAGAACAGTCGACCAATaGTTTCATATCAGCAGGATGGTTCGATGCAAGTACACATATCCT +
Preference number: 1 (lower is better)
Translates to: VPSLPHNSTCRTVDQ*FHISRMVRCKYTYP
Trigger: AGGATATGTGTACTTGCATCGAACCATCCTGCTGATATGAAAGCATTGGTCGACTGTTCTGCATGTTGAATTGTGGGGCAGGGAGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CCA 90 bp TTTAAGTGCCTCATGAAGACGCGAGGATCTCTTCCAAGTGCAACCTaGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTA +
Preference number: 1 (lower is better)
Translates to: FKCLMKTRGSLPSAT*SHQGTFSSRSLFPV
Trigger: TACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTCTTCATGAGGCACTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
3UTR CCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATaGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTTTTATAAGCTT +
Preference number: 1 (lower is better)
Translates to: SCFMDTGQSTSRALS*GAPDEFQPQFFYKL
Trigger: AAGCTTATAAAAGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR TCA 90 bp ATGCTTTCATATCAGCAGGATGGTTCGATGCAAGTACACATATCCTaGGCTATCCACAGTCCCCGAACTCTGCAACATTGCTTTCAGGTG +
Preference number: 1 (lower is better)
Translates to: MLSYQQDGSMQVHIS*AIHSPRTLQHCFQV
Trigger: CACCTGAAAGCAATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATGAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CCA 90 bp ATTCAACATGCAGAACAGTCGACCAATGCTTTCATATCAGCAGGATaGTTCGATGCAAGTACACATATCCTGAGCTATCCACAGTCCCCG +
Preference number: 1 (lower is better)
Translates to: IQHAEQSTNAFISAG*FDASTHILSYPQSP
Trigger: CGGGGACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATGAAAGCATTGGTCGACTGTTCTGCATGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CCA 90 bp TCTAGAACCAAGCAGCAATTTCTGGCTAAACAATGCAAGCCTGGCTaGCAGTTACCTTTCTCTCATGTTTTGTGCCTTCCCCAAGTCATT +
Preference number: 1 (lower is better)
Translates to: SRTKQQFLAKQCKPG*QLPFSHVLCLPQVI
Trigger: AATGACTTGGGGAAGGCACAAAACATGAGAGAAAGGTAACTGCCAGCCAGGCTTGCATTGTTTAGCCAGAAATTGCTGCTTGGTTCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR TCA 90 bp TTGTTGGAGTGTAGTAATGAATGCTGGTTGCTAGGTAGTAGAAACTaGCACTGCAGCAGGCAACCAAGTGCAATGGTGAAATTGCTGCTT +
Preference number: 1 (lower is better)
Translates to: LLECSNECWLLGSRN*HCSRQPSAMVKLLL
Trigger: AAGCAGCAATTTCACCATTGCACTTGGTTGCCTGCTGCAGTGTCAGTTTCTACTACCTAGCAACCAGCATTCATTACTACACTCCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR GCA 90 bp TGCAGCAGGCAACCAAGTGCAATGGTGAAATTGCTGCTTAAACCCTaGTTATCAAAAAGATTCACAGTGCCGATTAACTTAGGTAGTCTA +
Preference number: 1 (lower is better)
Translates to: CSRQPSAMVKLLLKP*LSKRFTVPINLGSL
Trigger: TAGACTACCTAAGTTAATCGGCACTGTGAATCTTTTTGATAAGCAGGGTTTAAGCAGCAATTTCACCATTGCACTTGGTTGCCTGCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CCA 90 bp GTCATGTCGTGTGCAATCAAGATAGGATCCCAGACATCTTCAGAATaGTTTACAGTCACAAGAAATAAAGTTCCAATGAAGTGGTTGGCA +
Preference number: 1 (lower is better)
Translates to: VMSCAIKIGSQTSSE*FTVTRNKVPMKWLA
Trigger: TGCCAACCACTTCATTGGAACTTTATTTCTTGTGACTGTAAACCATTCTGAAGATGTCTGGGATCCTATCTTGATTGCACACGACATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CCA 90 bp CATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCTAGGACTTaGGGATATAGAGTAATACATGTTTCGTGGCCAATAATAAAAGTG +
Preference number: 1 (lower is better)
Translates to: HCCTTSPTCRSCSRT*GYRVIHVSWPIIKV
Trigger: CACTTTTATTATTGGCCACGAAACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
3UTR TCA 90 bp TTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTaGAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATAGGC +
Preference number: 1 (lower is better)
Translates to: LVTFPLVIIKVVHAP*NVHKRSTIQGFIIG
Trigger: GCCTATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR GCA 90 bp ATTTCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATaGGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTAT +
Preference number: 1 (lower is better)
Translates to: ISVSYISTGYHQGCA*ALKCSQKVHDTGIY
Trigger: ATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR CCA 90 bp ACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTGATGAGAAATaGCCAAGACTGTTGACCCATGCACACATGTTGGTATTTACAGTT +
Preference number: 1 (lower is better)
Translates to: TSEMLIMNLASFDEK*PRLLTHAHMLVFTV
Trigger: AACTGTAAATACCAACATGTGTGCATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGAAGCCAAATTCATGATCAACATCTCTGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR TCA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGGCTTTAAGTGCCTCATaGAGACGCGAGGATCTCTTC +
Preference number: 2 (lower is better)
Translates to: DARISSKCNLVTSGHIQQALSAS*RREDLF
Trigger: GAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGC...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
3UTR-3UTR TCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTCCATGCAAATGAGCTaGCACAAGTCATGTCGTGTG +
Preference number: 2 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQSMQMS*HKSCRV
Trigger: CACACGACATGACTTGTGTCAGCTCATTTGCATGGA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR TCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTACAATTTAGCCGACTaGTGCAGTTTGGTTGTTTGG +
Preference number: 2 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQYNLAD*CSLVVW
Trigger: CCAAACAACCAAACTGCATCAGTCGGCTAAATTGTA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR TCA 90 bp CGATGCAAGTACACATATCCTGAGCTATCCACAGTCCCCGAACTCTGCAACATTGCTTTAAGTGCCTCATaGAGACGCGAGGATCTCTTC +
Preference number: 2 (lower is better)
Translates to: RCKYTYPELSTVPELCNIALSAS*RREDLF
Trigger: GAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGC...AATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAGGATATGTGTACTTGCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTTTACAGTTGTTTCATaGACACTGGCCAGTCTACAA +
Preference number: 2 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQFTVVS*TLASLQ
Trigger: TTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACAGCAGAGCACTCTCATaGGGAGCACCAGATGAGTTC +
Preference number: 2 (lower is better)
Translates to: TGYHQGCACALKCSQKVHSRALS*GAPDEF
Trigger: GAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCT...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR CAA 90 bp AGTACACATATCCTGAGCTATCCACAGTCCCCGAACTCTGCAACATaGCTTTCAGGTGATAGAGACAAGATGGTCCATGCAAATGAGCTG +
Preference number: 2 (lower is better)
Translates to: STHILSYPQSPNSAT*LSGDRDKMVHANEL
Trigger: CAGCTCATTTGCATGGACCATCTTGTCTCTATCACCTGAAAGCAATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAGGATATGTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCTTCCAAGTGCAACCTaGTCACATCAGGGCACATTC +
Preference number: 2 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSLPSAT*SHQGTF
Trigger: GAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAG...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
3UTR-3UTR CCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCTTCCAAGTGCAACCTaGTCACATCAGGGCACATTC +
Preference number: 2 (lower is better)
Translates to: TGYHQGCACALKCSQKVHLPSAT*SHQGTF
Trigger: GAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
3UTR-3UTR CCA 90 bp ATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCTAGGACTTGGGGATATACTTCCAAGTGCAACCTaGTCACATCAGGGCACATTC +
Preference number: 2 (lower is better)
Translates to: IAVQHLQHAGHALGLGDILPSAT*SHQGTF
Trigger: GAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAG...TATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
3UTR CAA 90 bp TTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGACAACCTCTTTGCAGTTATCTGTGTG +
Preference number: 2 (lower is better)
Translates to: FCAFPKSLSKRSGLG*RVTSNDNLFAVICV
Trigger: CACACAGATAACTGCAAAGAGGTTGTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR TCA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATGCTTTAAGTGCCTCATaGAGACGCGAGGATCTCTTC +
Preference number: 2 (lower is better)
Translates to: YISITALSNSQHNLMWAHALSAS*RREDLF
Trigger: GAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGC...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR TCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTGCTTTAAGTGCCTCATaGAGACGCGAGGATCTCTTC +
Preference number: 2 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGALSAS*RREDLF
Trigger: GAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGC...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAAAGCAGAGCACTCTCATaGGGAGCACCAGATGAGTTC +
Preference number: 2 (lower is better)
Translates to: SVSYISTGYHQGCACALKSRALS*GAPDEF
Trigger: GAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCT...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CCA 90 bp TGCTTCATGGAGACAGATGGCATATACAGGAAAGACAGGGAGCTAAGACAGACACCAAGCAGCAATTTCTaGCTAAACAATGCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: CFMETDGIYRKDRELRQTPSSNF*LNNASL
Trigger: CAGGCTTGCATTGTTTAGCCAGAAATTGCTGCTTGG...TGTCTGTCTTAGCTCCCTGTCTTTCCTGTATATGCCATCTGTCTCCATGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CAA 90 bp TTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGACAACCTCTTTGCAGTTATCTTTCCT +
Preference number: 2 (lower is better)
Translates to: FCAFPKSLSKRSGLG*RVTSNDNLFAVIFP
Trigger: AGGAAAGATAACTGCAAAGAGGTTGTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647764.1
3UTR-3UTR CCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCTCTTTTGATGAGAAATaGCCAAGACTGTTGACCCAT +
Preference number: 2 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGSFDEK*PRLLTH
Trigger: ATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGA...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
3UTR-3UTR CCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACCAATGCAAGCCTGGCTaGCAGTTACCTTTCTCTCAT +
Preference number: 2 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYQCKPG*QLPFSH
Trigger: ATGAGAGAAAGGTAACTGCCAGCCAGGCTTGCATTG...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CCA 90 bp TGCTTCATGGAGACAGATGGCATATACAGGAAAGACAGGGAGCTAAGACAGACAGCTTTGGGTGATATTTaGCACTCTGCCTCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: CFMETDGIYRKDRELRQTALGDI*HSASEN
Trigger: ATTTTCAGAGGCAGAGTGCCAAATATCACCCAAAGC...TGTCTGTCTTAGCTCCCTGTCTTTCCTGTATATGCCATCTGTCTCCATGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR TCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACAGTGTGGGCCTTACTTaGAACTTCAGAGATGTTGAT +
Preference number: 2 (lower is better)
Translates to: TGYHQGCACALKCSQKVHSVGLT*NFRDVD
Trigger: ATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACT...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR GCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTTTCTGGCTAAACAATaGAAGCCTGGCTGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYFLAKQ*KPGWQL
Trigger: TAACTGCCAGCCAGGCTTGCATTGTTTAGCCAGAAA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CAA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTaGGCTTCTTTTGATGAGAAATGGCCAAGACTGTTGACCCATGCA +
Preference number: 2 (lower is better)
Translates to: EVWALLETSEMLIMN*ASFDEKWPRLLTHA
Trigger: TGCATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR TCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACCCTAATGTGGGCCCATaGAGAGTAATTCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYPNVGP*RVIQRS
Trigger: ACTTCTTTGAATTACTCTTCATGGGCCCACATTAGG...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR GCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATAAGACTGTTGACCCATaGACACATGTTGGTATTTAC +
Preference number: 2 (lower is better)
Translates to: GYHQGCACALKCSQKVHDKTVDP*THVGIY
Trigger: GTAAATACCAACATGTGTGCATGGGTCAACAGTCTT...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACTCTTTTGATGAGAAATaGCCAAGACTGTTGACCCAT +
Preference number: 2 (lower is better)
Translates to: TGYHQGCACALKCSQKVHSFDEK*PRLLTH
Trigger: ATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGA...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR TCA 90 bp TTATCCCTCTATTTATATTACGGTCTTTTTCTTCCCTCACATGCTCAATACATGCAAGTACACATATCCTaGGCTATCCACAGTCCCCGA +
Preference number: 2 (lower is better)
Translates to: LSLYLYYGLFLPSHAQYMQVHIS*AIHSPR
Trigger: TCGGGGACTGTGGATAGCTCAGGATATGTGTACTTG...CATGTATTGAGCATGTGAGGGAAGAAAAAGACCGTAATATAAATAGAGGGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR GCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAACATCAAGGTTGTGCATaGGCCTTGAAATGTTCACAA +
Preference number: 2 (lower is better)
Translates to: SVSYISTGYHQGCACALKHQGCA*ALKCSQ
Trigger: TTGTGAACATTTCAAGGCGCATGCACAACCTTGATG...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR GCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAAAGAACAGTCGACCAATaGTTTCATATCAGCAGGATG +
Preference number: 2 (lower is better)
Translates to: SVSYISTGYHQGCACALKRTVDQ*FHISRM
Trigger: CATCCTGCTGATATGAAAGCATTGGTCGACTGTTCT...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTTTACAGTTGTTTCATaGACACTGGCCAGTCTACAA +
Preference number: 2 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYFTVVS*TLASLQ
Trigger: TTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CCA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATTTTACAGTTGTTTCATaGACACTGGCCAGTCTACAA +
Preference number: 2 (lower is better)
Translates to: YISITALSNSQHNLMWAHFTVVS*TLASLQ
Trigger: TTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAA...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CCA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATAAAGTTCCAATGAAGTaGTTGGCATTTGGAAGCACA +
Preference number: 2 (lower is better)
Translates to: YISITALSNSQHNLMWAHKVPMK*LAFGST
Trigger: TGTGCTTCCAAATGCCAACCACTTCATTGGAACTTT...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CAA 90 bp GTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTaGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATAGG +
Preference number: 2 (lower is better)
Translates to: VSYISTGYHQGCACA*KCSQKVHDTGIYNR
Trigger: CCTATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR GCA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTATAAGCTTTAAGTaGCTCATGAAGACGCGAGGA +
Preference number: 2 (lower is better)
Translates to: EVWALLETSEMLIMNLASFISFK*LMKTRG
Trigger: TCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAA...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR GCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTTTATAAGCTTTAAGTaGCTCATGAAGACGCGAGGA +
Preference number: 2 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCFISFK*LMKTRG
Trigger: TCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAA...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR GCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAAAAGACTGTTGACCCATaGACACATGTTGGTATTTAC +
Preference number: 2 (lower is better)
Translates to: SVSYISTGYHQGCACALKKTVDP*THVGIY
Trigger: GTAAATACCAACATGTGTGCATGGGTCAACAGTCTT...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATTCTTTTGATGAGAAATaGCCAAGACTGTTGACCCAT +
Preference number: 2 (lower is better)
Translates to: CACALKCSQKVHDTGIYNSFDEK*PRLLTH
Trigger: ATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGA...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR CAA 90 bp AATAGACTTTCTTCCACTCAGACTGAATATGACTCCCTAAGGATTTaGTTGGAGTGTAGTAATGAATGCTGGTTGCTAGGTAGTAGAAAC +
Preference number: 2 (lower is better)
Translates to: NRLSSTQTEYDSLRI*LECSNECWLLGSRN
Trigger: GTTTCTACTACCTAGCAACCAGCATTCATTACTACACTCCAACAAAATCCTTAGGGAGTCATATTCAGTCTGAGTGGAAGAAAGTCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CCA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATCAGACATCTTCAGAATaGTTTACAGTCACAAGAAAT +
Preference number: 2 (lower is better)
Translates to: YISITALSNSQHNLMWAHQTSSE*FTVTRN
Trigger: ATTTCTTGTGACTGTAAACCATTCTGAAGATGTCTG...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CCA 90 bp GTGCCGATTAACTTAGGTAGTCTACAGAGCATCATTAATTTATACACAAAGCAGAAGACACAAGAGCTTTaGGTGATATTTGGCACTCTG +
Preference number: 2 (lower is better)
Translates to: VPINLGSLQSIINLYTKQKTQEL*VIFGTL
Trigger: CAGAGTGCCAAATATCACCCAAAGCTCTTGTGTCTT...CTGCTTTGTGTATAAATTAATGATGCTCTGTAGACTACCTAAGTTAATCGGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CCA 90 bp GTGCCGATTAACTTAGGTAGTCTACAGAGCATCATTAATTTATACACAAAGCAGTTCATATCAGCAGGATaGTTCGATGCAAGTACACAT +
Preference number: 2 (lower is better)
Translates to: VPINLGSLQSIINLYTKQFISAG*FDASTH
Trigger: ATGTGTACTTGCATCGAACCATCCTGCTGATATGAA...CTGCTTTGTGTATAAATTAATGATGCTCTGTAGACTACCTAAGTTAATCGGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CCA 72 bp ATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATaGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTTT +
Preference number: 3 (lower is better)
Translates to: MDTGQSTSRALS*GAPDEFQPQFF
Trigger: AAAGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR TCA 72 bp TATCAGCAGGATGGTTCGATGCAAGTACACATATCCTaGGCTATCCACAGTCCCCGAACTCTGCAACATTGC +
Preference number: 3 (lower is better)
Translates to: YQQDGSMQVHIS*AIHSPRTLQHC
Trigger: GCAATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR GCA 72 bp GTCGACCAATGCTTTCATATCAGCAGGATGGTTCGATaGAAGTACACATATCCTGAGCTATCCACAGTCCCC +
Preference number: 3 (lower is better)
Translates to: VDQCFHISRMVR*KYTYPELSTVP
Trigger: GGGGACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATGAAAGCATTGGTCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CAA 90 bp TGCTTCATGGAGACAGATGGCATATACAGGAAAGACAGGGAGCTAAGACAGACAGTTCCAATGAAGTGGTaGGCATTTGGAAGCACACTG +
Preference number: 3 (lower is better)
Translates to: CFMETDGIYRKDRELRQTVPMKW*AFGSTL
Trigger: CAGTGTGCTTCCAAATGCCAACCACTTCATTGGAAC...TGTCTGTCTTAGCTCCCTGTCTTTCCTGTATATGCCATCTGTCTCCATGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CAA 90 bp CATATCAGCAGGATGGTTCGATGCAAGTACACATATCCTGAGCTATCCACAGTCCCGAACTCTGCAACATaGCTTTCAGGTGATAGAGAC +
Preference number: 3 (lower is better)
Translates to: HISRMVRCKYTYPELSTVPNSAT*LSGDRD
Trigger: GTCTCTATCACCTGAAAGCAATGTTGCAGAGTTCGG...GACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CAA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGAC +
Preference number: 3 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGRSGLG*RVTSND
Trigger: GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCT...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
3UTR CCA 72 bp AAGCAGCAATTTCTGGCTAAACAATGCAAGCCTGGCTaGCAGTTACCTTTCTCTCATGTTTTGTGCCTTCCC +
Preference number: 3 (lower is better)
Translates to: KQQFLAKQCKPG*QLPFSHVLCLP
Trigger: GGGAAGGCACAAAACATGAGAGAAAGGTAACTGCCAGCCAGGCTTGCATTGTTTAGCCAGAAATTGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CAA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATAAATGGCCAAGACTGTaGACCCATGCACACATGTTG +
Preference number: 3 (lower is better)
Translates to: GYHQGCACALKCSQKVHDKWPRL*THAHML
Trigger: CAACATGTGTGCATGGGTCAACAGTCTTGGCCATTT...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR CCA 72 bp GCAGAACAGTCGACCAATGCTTTCATATCAGCAGGATaGTTCGATGCAAGTACACATATCCTGAGCTATCCA +
Preference number: 3 (lower is better)
Translates to: AEQSTNAFISAG*FDASTHILSYP
Trigger: TGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATGAAAGCATTGGTCGACTGTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CCA 72 bp TCTTACAGAGGCATTTCTGTGCTTCATGGAGACAGATaGCATATACAGGAAAGACAGGGAGCTAAGACAGAC +
Preference number: 3 (lower is better)
Translates to: SYRGISVLHGDR*HIQERQGAKTD
Trigger: GTCTGTCTTAGCTCCCTGTCTTTCCTGTATATGCCATCTGTCTCCATGAAGCACAGAAATGCCTCTGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR TCA 72 bp TGTAGTAATGAATGCTGGTTGCTAGGTAGTAGAAACTaGCACTGCAGCAGGCAACCAAGTGCAATGGTGAAA +
Preference number: 3 (lower is better)
Translates to: CSNECWLLGSRN*HCSRQPSAMVK
Trigger: TTTCACCATTGCACTTGGTTGCCTGCTGCAGTGTCAGTTTCTACTACCTAGCAACCAGCATTCATTACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CAA 90 bp GTGCCGATTAACTTAGGTAGTCTACAGAGCATCATTAATTTATACACAAAGCAGAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGAC +
Preference number: 3 (lower is better)
Translates to: VPINLGSLQSIINLYTKQRSGLG*RVTSND
Trigger: GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCT...CTGCTTTGTGTATAAATTAATGATGCTCTGTAGACTACCTAAGTTAATCGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR TCA 72 bp TTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTaGAATGTTCACAAAAGGTCCACGATACAGGGATTT +
Preference number: 3 (lower is better)
Translates to: FPLVIIKVVHAP*NVHKRSTIQGF
Trigger: AAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR TCA 72 bp GAAACTGACACTGCAGCAGGCAACCAAGTGCAATGGTaGAATTGCTGCTTAAACCCTGCTTATCAAAAAGAT +
Preference number: 3 (lower is better)
Translates to: ETDTAAGNQVQW*NCCLNPAYQKD
Trigger: ATCTTTTTGATAAGCAGGGTTTAAGCAGCAATTTCACCATTGCACTTGGTTGCCTGCTGCAGTGTCAGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR-3UTR CAA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACACCCATGCACACATGTaGGTATTTACAGTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: TGYHQGCACALKCSQKVHTHAHM*VFTVVS
Trigger: TGAAACAACTGTAAATACCAACATGTGTGCATGGGT...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CAA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATGTAATGACAACCTCTTaGCAGTTATCTGTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: GYHQGCACALKCSQKVHDVMTTS*QLSVCK
Trigger: TTTGCACACAGATAACTGCAAAGAGGTTGTCATTAC...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR GCA 72 bp AGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATaGGCCTTGAAATGTTCACAAAAGGTCCACGATACA +
Preference number: 3 (lower is better)
Translates to: SYISTGYHQGCA*ALKCSQKVHDT
Trigger: TGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CAA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATACCCATGCACACATGTaGGTATTTACAGTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: YISITALSNSQHNLMWAHTHAHM*VFTVVS
Trigger: TGAAACAACTGTAAATACCAACATGTGTGCATGGGT...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CAA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATGAAACTTCAGAGATGTaGATCATGAATTTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: GYHQGCACALKCSQKVHDETSEM*IMNLAS
Trigger: AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTC...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CAA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGAAACTTCAGAGATGTaGATCATGAATTTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: TGYHQGCACALKCSQKVHETSEM*IMNLAS
Trigger: AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTC...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CAA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATACCCATGCACACATGTaGGTATTTACAGTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: CACALKCSQKVHDTGIYNTHAHM*VFTVVS
Trigger: TGAAACAACTGTAAATACCAACATGTGTGCATGGGT...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CAA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTGAAACTTCAGAGATGTaGATCATGAATTTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGETSEM*IMNLAS
Trigger: AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTC...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR GCA 72 bp ATACATTGCTGTACAACATCTCCAACATGCAGGTCATaGTCTAGGACTTGGGGATATAGAGTAATACATGTT +
Preference number: 3 (lower is better)
Translates to: IHCCTTSPTCRS*SRTWGYRVIHV
Trigger: AACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
3UTR-3UTR CAA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAAGAAACTTCAGAGATGTaGATCATGAATTTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: SVSYISTGYHQGCACALKETSEM*IMNLAS
Trigger: AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTC...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGACCCATGCACACATGTaGGTATTTACAGTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: FKEVWALLETSEMLIMNLTHAHM*VFTVVS
Trigger: TGAAACAACTGTAAATACCAACATGTGTGCATGGGT...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGTGCCGCCGCGGGAACTaGAGTTGCCCGCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: DARISSKCNLVTSGHIQQCRRGN*SCPRRP
Trigger: AGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCA...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCGCCCACATGCGGGGCTaGAGCCTCCTCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSAHMRG*SLLQRP
Trigger: TGGCCGCTGGAGGAGGCTGCAGCCCCGCATGTGGGC...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCGATGGTCGCTGGCCCTaGCGCCGCGGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSDGRWP*RRGNCS
Trigger: ACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATC...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCCGCGTCCTCGATaGCCAGCCTCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQPPRPR*PASWPP
Trigger: TGGCGGCCAAGAGGCTGGGCATCGAGGACGCGGCGG...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGCCGCCGCGTCCTCGATaGCCAGCCTCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMPPRPR*PASWPP
Trigger: TGGCGGCCAAGAGGCTGGGCATCGAGGACGCGGCGG...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTGCCCACATGCGGGGCTaGAGCCTCCTCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSAHMRG*SLLQRP
Trigger: TGGCCGCTGGAGGAGGCTGCAGCCCCGCATGTGGGC...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTGTCTTGGCGCCCAGGTaGGCCGCCCTTCTCCGACGA +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSVLAPR*AALLRR
Trigger: TCGTCGGAGAAGGGCGGCTCACCTGGGCGCCAAGAC...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGCGGGGTCGCCGCCAATaGGGTCGGGGGTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMRGRRQ*GRGSRR
Trigger: TCTTCGAGACCCCCGACCTCATTGGCGGCGACCCCG...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTGATGGTCGCTGGCCCTaGCGCCGCGGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSDGRWP*RRGNCS
Trigger: ACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATC...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCGGTCAAGCAGTCGCCTaGGGGCTCGGAGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSGQAVA*GLGGGK
Trigger: CTTGCCTCCTCCGAGCCCCCAGGCGACTGCTTGACC...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACACCGGGATGGTCGCTaGCCCTGCCGCCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAHRDGR*PCRRGN
Trigger: GTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTG...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGTGCCGCCGCGGGAACTaGAGTTGCCCGCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGCRRGN*SCPRRP
Trigger: AGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCA...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGGGTCAAGCAGTCGCCTaGGGGCTCGGAGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMGQAVA*GLGGGK
Trigger: CTTGCCTCCTCCGAGCCCCCAGGCGACTGCTTGACC...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGCGATGCCCAGCCTCTTaGCCGCCAGGTCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMRCPAS*PPGPRR
Trigger: ACGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCG...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTCAGATCGGCTGGCCGTaGATGGAGTGGAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSQIGWP*MEWRLA
Trigger: GGCCAGTCTCCACTCCATTCACGGCCAGCCGATCTG...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACGGGGTCGCCGCCAATaGGGTCGGGGGTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGARGRRQ*GRGSRR
Trigger: TCTTCGAGACCCCCGACCTCATTGGCGGCGACCCCG...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CTGAGCTATCCACAGTCCCCGAACTCTGCAACATTGCTTTCAGGTGATAGAGACGCCCACATGCGGGGCTaGAGCCTCCTCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LSYPQSPNSATLLSGDRDAHMRG*SLLQRP
Trigger: TGGCCGCTGGAGGAGGCTGCAGCCCCGCATGTGGGC...GTCTCTATCACCTGAAAGCAATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCGGATTCAGGTGGTTaGGCCGCTTCCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAPDSGG*AASLGA
Trigger: AGCGCCCAGGGAAGCGGCTCAACCACCTGAATCCGG...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGGGGTGCCCCCGACATTaGGGATCACCCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMGCPRH*GSPSRC
Trigger: ACAACGAGAGGGTGATCCTCAATGTCGGGGGCACCC...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGGTAGGTGAGCTTGCCTaGGGAGCAGGAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMVGELA*GAGGMC
Trigger: GCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTAC...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCCGCGGGAACTGCAGTTaGCCGCGCCGCCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGRGNCS*PRRPRS
Trigger: GCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCG...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp CCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCAGTAATGACCCGCCGCGTCCTCGATaGCCAGCCTCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PKSLSKRSGLGLRVTSNDPPRPR*PASWPP
Trigger: TGGCGGCCAAGAGGCTGGGCATCGAGGACGCGGCGG...GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCGTCTTGGCGCCCAGGTaGGCCGCCCTTCTCCGACGA +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGVLAPR*AALLRR
Trigger: TCGTCGGAGAAGGGCGGCTCACCTGGGCGCCAAGAC...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTTTCCAGGCAGGGTCTTaGGGGTGCTGCGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSFQAGS*GCCGRF
Trigger: AAACCTACCGCAGCACCCTCAAGACCCTGCCTGGAA...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCATGCCGCCGCGGGAACTaGAGTTGCCCGCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRACRRGN*SCPRRP
Trigger: AGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCA...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCGATGGTCGCTGGCCCTaGCGCCGCGGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGDGRWP*RRGNCS
Trigger: ACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATC...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTTCCAGCGGCCAGATTTaGCGTCGGGGCCCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSSSGQI*RRGPRA
Trigger: GGCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGA...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTAGCGGGACTGAGTCTTaGCGCCCAGGTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLSGTES*RPGEPP
Trigger: GGGCGGCTCACCTGGGCGCCAAGACTCAGTCCCGCT...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCGCTTTGGTTTCCGAGTaGACGAGGTTCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSALVSE*TRFSGQ
Trigger: CTGCCCAGAGAACCTCGTCCACTCGGAAACCAAAGC...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGCTTGTCGCCCGCCGTaGTCAAGCAGTCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLACRPP*SSSRLG
Trigger: CCCCAGGCGACTGCTTGACCACGGCGGGCGACAAGC...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCACCGGGATGGTCGCTaGCCCTGCCGCCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHHRDGR*PCRRGN
Trigger: GTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGCGATGCCCAGCCTCTTaGCCGCCAGGTCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGRCPAS*PPGPRR
Trigger: ACGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCG...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCGGGGTCGCCGCCAATaGGGTCGGGGGTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSRGRRQ*GRGSRR
Trigger: TCTTCGAGACCCCCGACCTCATTGGCGGCGACCCCG...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCTGTGTGCTCACTAGCTaGAGGGTCGTTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSCVLTS*RVVRLS
Trigger: GCTCAACCTAACGACCCTTCAGCTAGTGAGCACACA...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAGTAGGTGAGCTTGCCTaGGGAGCAGGAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAVGELA*GAGGMC
Trigger: GCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTAC...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCGCGGGAACTGCAGTTaGCCGCGCCGCCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHRGNCS*PRRPRS
Trigger: GCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATCGCGGGAACTGCAGTTaGCCGCGCCGCCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GYHQGCACALKCSQKVHDRGNCS*PRRPRS
Trigger: GCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCG...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACCGCCGCGTCCTCGATaGCCAGCCTCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAPPRPR*PASWPP
Trigger: TGGCGGCCAAGAGGCTGGGCATCGAGGACGCGGCGG...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATCCGCCGCGTCCTCGATaGCCAGCCTCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GYHQGCACALKCSQKVHDPPRPR*PASWPP
Trigger: TGGCGGCCAAGAGGCTGGGCATCGAGGACGCGGCGG...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTCCGCCGCGTCCTCGATaGCCAGCCTCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLPPRPR*PASWPP
Trigger: TGGCGGCCAAGAGGCTGGGCATCGAGGACGCGGCGG...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTTCCAGCGGCCAGATTTaGCGTCGGGGCCCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSSSGQI*RRGPRA
Trigger: GGCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGA...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACTCCAGCGGCCAGATTTaGCGTCGGGGCCCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHSSGQI*RRGPRA
Trigger: GGCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGA...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATTCCAGCGGCCAGATTTaGCGTCGGGGCCCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: GYHQGCACALKCSQKVHDSSGQI*RRGPRA
Trigger: GGCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGA...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATGCCCACATGCGGGGCTaGAGCCTCCTCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GYHQGCACALKCSQKVHDAHMRG*SLLQRP
Trigger: TGGCCGCTGGAGGAGGCTGCAGCCCCGCATGTGGGC...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTTTTTCCGGATTCAGGTaGTTGAGCCGCTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSFSGFR*LSRFPG
Trigger: CCCAGGGAAGCGGCTCAACCACCTGAATCCGGAAAA...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTCGATGCCCAGCCTCTTaGCCGCCAGGTCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLRCPAS*PPGPRR
Trigger: ACGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCG...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCCCGGATTCAGGTGGTTaGGCCGCTTCCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALPDSGG*AASLGA
Trigger: AGCGCCCAGGGAAGCGGCTCAACCACCTGAATCCGG...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTGTCTTGGCGCCCAGGTaGGCCGCCCTTCTCCGACGA +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSVLAPR*AALLRR
Trigger: TCGTCGGAGAAGGGCGGCTCACCTGGGCGCCAAGAC...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTCGGGGTCGCCGCCAATaGGGTCGGGGGTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLRGRRQ*GRGSRR
Trigger: TCTTCGAGACCCCCGACCTCATTGGCGGCGACCCCG...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGTGGATGACAGCCCACTaGGTCCCACCTCTAAGTAGA +
Preference number: 4 (lower is better)
Translates to: DARISSKCNLVTSGHIQQWMTAH*VPPLSR
Trigger: TCTACTTAGAGGTGGGACTCAGTGGGCTGTCATCCA...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTTTAGCAGCTTTGGATaGCAGCCCACTGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQFSSFG*QPTESH
Trigger: GTGGGACTCAGTGGGCTGTCATCCAAAGCTGCTAAA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTGTGTGCTCACTAGCTaGAGGGTCGTTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQCVLTS*RVVRLS
Trigger: GCTCAACCTAACGACCCTTCAGCTAGTGAGCACACA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp AAAGCCTGGGTAAGATTCATTAGCTACCCAAGTGGCATTTCTGACTTCAAATTGTGCCGCCGCGGGAACTaGAGTTGCCCGCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: KAWVRFISYPSGISDFKLCRRGN*SCPRRP
Trigger: AGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCA...CAATTTGAAGTCAGAAATGCCACTTGGGTAGCTAATGAATCTTACCCAGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp GTATGTCTGGATAAATACATTGCTGTACAACATCTCCAACATGCAGGTCATGCTTGCCGCCGCGGGAACTaGAGTTGCCCGCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: VCLDKYIAVQHLQHAGHACRRGN*SCPRRP
Trigger: AGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCA...AGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTGATGGTCGCTGGCCCTaGCGCCGCGGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSDGRWP*RRGNCS
Trigger: ACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATC...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTTCCAGCGGCCAGATTTaGCGTCGGGGCCCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGSSGQI*RRGPRA
Trigger: GGCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGA...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTCCAGCGGCCAGATTTaGCGTCGGGGCCCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYSSGQI*RRGPRA
Trigger: GGCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTGCCCACATGCGGGGCTaGAGCCTCCTCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGAHMRG*SLLQRP
Trigger: TGGCCGCTGGAGGAGGCTGCAGCCCCGCATGTGGGC...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTGTTGAGCCGCTTCCCTaGGCGCTGGGGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLVEPLP*ALGWGR
Trigger: TCTCCCCCACCCCAGCGCCCAGGGAAGCGGCTCAAC...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTGTTGAGCCGCTTCCCTaGGCGCTGGGGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSVEPLP*ALGWGR
Trigger: TCTCCCCCACCCCAGCGCCCAGGGAAGCGGCTCAAC...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTAGCGGGACTGAGTCTTaGCGCCCAGGTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSSGTES*RPGEPP
Trigger: GGGCGGCTCACCTGGGCGCCAAGACTCAGTCCCGCT...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATGCTTGTCGCCCGCCGTaGTCAAGCAGTCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GYHQGCACALKCSQKVHDACRPP*SSSRLG
Trigger: CCCCAGGCGACTGCTTGACCACGGCGGGCGACAAGC...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAACACCGGGATGGTCGCTaGCCCTGCCGCCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKHRDGR*PCRRGN
Trigger: GTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTG...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCTTCCAAGTGCAACCTaGTCACATCAGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSLPSAT*SHQGTF
Trigger: GAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAG...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGAGCAGAGCACTCTCATaGGGAGCACCAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQSRALS*GAPDEF
Trigger: GAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCT...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTAGCAGAGCACTCTCATaGGGAGCACCAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSSRALS*GAPDEF
Trigger: GAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCT...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGCAGAGCACTCTCATaGGGAGCACCAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMSRALS*GAPDEF
Trigger: GAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCT...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGGTGCCCCCGACATTaGGGATCACCCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLGCPRH*GSPSRC
Trigger: ACAACGAGAGGGTGATCCTCAATGTCGGGGGCACCC...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCGGGTGCCCCCGACATTaGGGATCACCCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGGCPRH*GSPSRC
Trigger: ACAACGAGAGGGTGATCCTCAATGTCGGGGGCACCC...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCGGGGTCGCCGCCAATaGGGTCGGGGGTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGRGRRQ*GRGSRR
Trigger: TCTTCGAGACCCCCGACCTCATTGGCGGCGACCCCG...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGCAAACCTTACCACCCTaGGGAAGCCAAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: DARISSKCNLVTSGHIQQQTLPP*GSQAHL
Trigger: AAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTG...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGGAAGGGTCGTTAGGTTaGGCTCCCACTCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGEGSLG*APTLSA
Trigger: TGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTC...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCGTTGTGCATGCGCCTTaGAATGTTCACAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSVVHAP*NVHKRS
Trigger: GGACCTTTTGTGAACATTTCAAGGCGCATGCACAAC...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGAGGAGAGTTGTAGGGTaGTGTTACTGGAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQRRVVG*CYWREP
Trigger: AGGCTCTCTCCAGTAACATCACCCTACAACTCTCCT...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCTCCATGCAAATGAGCTaGCACAAGTCATGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSSMQMS*HKSCRV
Trigger: CACACGACATGACTTGTGTCAGCTCATTTGCATGGA...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTCGCGGGAACTGCAGTTaGCCGCGCCGCCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCRGNCS*PRRPRS
Trigger: GCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCG...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTGGGTTGGGCAAACCATaGAGCTCGGGGCGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSGLGKP*SSGRVQ
Trigger: CTGGACCCGCCCCGAGCTCCATGGTTTGCCCAACCC...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACGTTGAGCCGCTTCCCTaGGCGCTGGGGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYVEPLP*ALGWGR
Trigger: TCTCCCCCACCCCAGCGCCCAGGGAAGCGGCTCAAC...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp AGGTCATGCTCTAGGACTTGGGGATATAGAGTAATACATGTTTCGTGGCCAATAGTTGAGCCGCTTCCCTaGGCGCTGGGGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RSCSRTWGYRVIHVSWPIVEPLP*ALGWGR
Trigger: TCTCCCCCACCCCAGCGCCCAGGGAAGCGGCTCAAC...TATTGGCCACGAAACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGCGGGACTGAGTCTTaGCGCCCAGGTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYSGTES*RPGEPP
Trigger: GGGCGGCTCACCTGGGCGCCAAGACTCAGTCCCGCT...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGGTCAAGCAGTCGCCTaGGGGCTCGGAGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHGQAVA*GLGGGK
Trigger: CTTGCCTCCTCCGAGCCCCCAGGCGACTGCTTGACC...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTCACCGGGATGGTCGCTaGCCCTGCCGCCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: VWALLETSEMLIMNLASFHRDGR*PCRRGN
Trigger: GTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTG...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCAGATCGGCTGGCCGTaGATGGAGTGGAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSQIGWP*MEWRLA
Trigger: GGCCAGTCTCCACTCCATTCACGGCCAGCCGATCTG...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCGGATTCAGGTGGTTaGGCCGCTTCCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGPDSGG*AASLGA
Trigger: AGCGCCCAGGGAAGCGGCTCAACCACCTGAATCCGG...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAAGTCTTGGCGCCCAGGTaGGCCGCCCTTCTCCGACGA +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKVLAPR*AALLRR
Trigger: TCGTCGGAGAAGGGCGGCTCACCTGGGCGCCAAGAC...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTCTTGCCCATCTCTGTaGCTCAGACATGACTTAACG +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQSCPSL*LRHDLT
Trigger: CGTTAAGTCATGTCTGAGTCACAGAGATGGGCAAGA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCTTCCAGGCAGGGTCTTaGGGGTGCTGCGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGFQAGS*GCCGRF
Trigger: AAACCTACCGCAGCACCCTCAAGACCCTGCCTGGAA...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTCGGGGTCGCCGCCAATaGGGTCGGGGGTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCRGRRQ*GRGSRR
Trigger: TCTTCGAGACCCCCGACCTCATTGGCGGCGACCCCG...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTGCAGTTATCTTTCCTaGTCCCTCCATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQCSYLS*SLHQKH
Trigger: GTGCTTCTGATGGAGGGATCAGGAAAGATAACTGCA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTGTTGTGCATGCGCCTTaGAATGTTCACAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSVVHAP*NVHKRS
Trigger: GGACCTTTTGTGAACATTTCAAGGCGCATGCACAAC...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTGATGGTCCATGCAAATaGGCTGACACAAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSDGPCK*ADTSHV
Trigger: GACATGACTTGTGTCAGCTCATTTGCATGGACCATC...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTTGTACAACACTTTCCTaGTCCCTCCATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSCTTLS*SLHQKH
Trigger: GTGCTTCTGATGGAGGGATCAGGAAAGTGTTGTACA...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550433.5
CDS-3UTR GCA 90 bp CCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCAGTAATGACTGTGATCTGCGGATTTaGCAGTCGCCAACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: PKSLSKRSGLGLRVTSNDCDLRI*QSPTSA
Trigger: CGCGGAGGTTGGCGACTGGCAAATCCGCAGATCACA...GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCAGAGAAAAGTGGTTCTaGTTTGGTTTCCGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSREKWF*FGFRVD
Trigger: GTCCACTCGGAAACCAAAGCAGAACCACTTTTCTCT...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTCGCGGGAACTGCAGTTaGCCGCGCCGCCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: VWALLETSEMLIMNLASFRGNCS*PRRPRS
Trigger: GCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCG...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGTGCCGCCGCGGGAACTaGAGTTGCCCGCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: FKEVWALLETSEMLIMNLCRRGN*SCPRRP
Trigger: AGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCA...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAAGATGGTCGCTGGCCCTaGCGCCGCGGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKDGRWP*RRGNCS
Trigger: ACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATC...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGCAAATCAGCCACTGCTaGAGCTGTCCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGQISHC*SCPFST
Trigger: GGTGCTGAAGGGACAGCTCCAGCAGTGGCTGATTTG...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTTCGGCTGGCCGTGAATaGAGTGGAGACTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSSAGRE*SGDWPQ
Trigger: CTGCGGCCAGTCTCCACTCCATTCACGGCCAGCCGA...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTTCGGCTGGCCGTGAATaGAGTGGAGACTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLSAGRE*SGDWPQ
Trigger: CTGCGGCCAGTCTCCACTCCATTCACGGCCAGCCGA...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACGGGTTGGGCAAACCATaGAGCTCGGGGCGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYGLGKP*SSGRVQ
Trigger: CTGGACCCGCCCCGAGCTCCATGGTTTGCCCAACCC...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGAAAGTGGTTCTGCTTTaGTTTCCGAGTGGACGAGGT +
Preference number: 4 (lower is better)
Translates to: DARISSKCNLVTSGHIQQKVVLL*FPSGRG
Trigger: ACCTCGTCCACTCGGAAACCAAAGCAGAACCACTTT...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATGCTTGTCGCCCGCCGTaGTCAAGCAGTCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNACRPP*SSSRLG
Trigger: CCCCAGGCGACTGCTTGACCACGGCGGGCGACAAGC...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTGCTTGTCGCCCGCCGTaGTCAAGCAGTCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCACRPP*SSSRLG
Trigger: CCCCAGGCGACTGCTTGACCACGGCGGGCGACAAGC...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCAGATCGGCTGGCCGTaGATGGAGTGGAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGQIGWP*MEWRLA
Trigger: GGCCAGTCTCCACTCCATTCACGGCCAGCCGATCTG...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGTTTAGCAGCTTTGGATaGCAGCCCACTGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGFSSFG*QPTESH
Trigger: GTGGGACTCAGTGGGCTGTCATCCAAAGCTGCTAAA...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTGAAGGGTCGTTAGGTTaGGCTCCCACTCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSEGSLG*APTLSA
Trigger: TGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTC...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAGTAGGTGAGCTTGCCTaGGGAGCAGGAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAVGELA*GAGGMC
Trigger: GCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTAC...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTGTAGGTGAGCTTGCCTaGGGAGCAGGAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLVGELA*GAGGMC
Trigger: GCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTAC...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGTAGGTGAGCTTGCCTaGGGAGCAGGAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHVGELA*GAGGMC
Trigger: GCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTAC...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGAGAGAAAAGTGGTTCTaGTTTGGTTTCCGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQREKWF*FGFRVD
Trigger: GTCCACTCGGAAACCAAAGCAGAACCACTTTTCTCT...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCCCACATGCGGGGCTaGAGCCTCCTCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FKEVWALLETSEMLIMNLAHMRG*SLLQRP
Trigger: TGGCCGCTGGAGGAGGCTGCAGCCCCGCATGTGGGC...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTTCCTTGGAAGTTTCTaGTTTGCCATTGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQFLGSF*FAIAKE
Trigger: CTCCTTGGCAATGGCAAAGCAGAAACTTCCAAGGAA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTCAAATCAGCCACTGCTaGAGCTGTCCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLQISHC*SCPFST
Trigger: GGTGCTGAAGGGACAGCTCCAGCAGTGGCTGATTTG...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTGGGTTGGGCAAACCATaGAGCTCGGGGCGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCGLGKP*SSGRVQ
Trigger: CTGGACCCGCCCCGAGCTCCATGGTTTGCCCAACCC...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACCATCGCGCAGGGTTaGGCAAACCATGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GYHQGCACALKCSQKVHDTIAQG*ANHGAR
Trigger: CCGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGT...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTACCATCGCGCAGGGTTaGGCAAACCATGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLTIAQG*ANHGAR
Trigger: CCGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGT...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACACCATCGCGCAGGGTTaGGCAAACCATGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHTIAQG*ANHGAR
Trigger: CCGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGT...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGCGAGAAACTACTTGTTaGCGTTTTCCGGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMRETTC*RFPDSG
Trigger: ACCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCG...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp CCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCAGTAATGACGCTTTGGTTTCCGAGTaGACGAGGTTCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PKSLSKRSGLGLRVTSNDALVSE*TRFSGQ
Trigger: CTGCCCAGAGAACCTCGTCCACTCGGAAACCAAAGC...GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAAGGTCAAGCAGTCGCCTaGGGGCTCGGAGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKGQAVA*GLGGGK
Trigger: CTTGCCTCCTCCGAGCCCCCAGGCGACTGCTTGACC...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp GTATGTCTGGATAAATACATTGCTGTACAACATCTCCAACATGCAGGTCATGCTGGTCAAGCAGTCGCCTaGGGGCTCGGAGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: VCLDKYIAVQHLQHAGHAGQAVA*GLGGGK
Trigger: CTTGCCTCCTCCGAGCCCCCAGGCGACTGCTTGACC...AGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTGCTTGTCGCCCGCCGTaGTCAAGCAGTCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VWALLETSEMLIMNLASFACRPP*SSSRLG
Trigger: CCCCAGGCGACTGCTTGACCACGGCGGGCGACAAGC...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTATCCCTCTATTTATATTACGGTCTTTTTCTTCCCTCACATGCTCAATACATGCACCGGGATGGTCGCTaGCCCTGCCGCCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LSLYLYYGLFLPSHAQYMHRDGR*PCRRGN
Trigger: GTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTG...CATGTATTGAGCATGTGAGGGAAGAAAAAGACCGTAATATAAATAGAGGGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATCGATGCCCAGCCTCTTaGCCGCCAGGTCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNRCPAS*PPGPRR
Trigger: ACGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCG...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACTTCCAAGTGCAACCTaGTCACATCAGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGALPSAT*SHQGTF
Trigger: GAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAG...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATCAGATCGGCTGGCCGTaGATGGAGTGGAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNQIGWP*MEWRLA
Trigger: GGCCAGTCTCCACTCCATTCACGGCCAGCCGATCTG...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACGGGTGCCCCCGACATTaGGGATCACCCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYGCPRH*GSPSRC
Trigger: ACAACGAGAGGGTGATCCTCAATGTCGGGGGCACCC...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTTTCCAGGCAGGGTCTTaGGGGTGCTGCGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLFQAGS*GCCGRF
Trigger: AAACCTACCGCAGCACCCTCAAGACCCTGCCTGGAA...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAGAAGGGTCGTTAGGTTaGGCTCCCACTCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAEGSLG*APTLSA
Trigger: TGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTC...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGAAGGGTCGTTAGGTTaGGCTCCCACTCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHEGSLG*APTLSA
Trigger: TGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTC...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCTAGGACTTGGGGATATAGAAGGGTCGTTAGGTTaGGCTCCCACTCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: IAVQHLQHAGHALGLGDIEGSLG*APTLSA
Trigger: TGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTC...TATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp CCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCAGTAATGACTGTGTGCTCACTAGCTaGAGGGTCGTTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PKSLSKRSGLGLRVTSNDCVLTS*RVVRLS
Trigger: GCTCAACCTAACGACCCTTCAGCTAGTGAGCACACA...GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTCCTAATGTGGGCCCATaGAGAGTAATTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSPNVGP*RVIQRS
Trigger: ACTTCTTTGAATTACTCTTCATGGGCCCACATTAGG...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAGTTGTGCATGCGCCTTaGAATGTTCACAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAVVHAP*NVHKRS
Trigger: GGACCTTTTGTGAACATTTCAAGGCGCATGCACAAC...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTTACAATTTAGCCGACTaGTGCAGTTTGGTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSYNLAD*CSLVVW
Trigger: CCAAACAACCAAACTGCATCAGTCGGCTAAATTGTA...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCCCCAAATCAGCCACTaGTGGAGCTGTCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHPQISH*WSCPFS
Trigger: GCTGAAGGGACAGCTCCAGCAGTGGCTGATTTGGGG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACTGTGATCTGCGGATTTaGCAGTCGCCAACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHCDLRI*QSPTSA
Trigger: CGCGGAGGTTGGCGACTGGCAAATCCGCAGATCACA...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTTGTGATCTGCGGATTTaGCAGTCGCCAACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSCDLRI*QSPTSA
Trigger: CGCGGAGGTTGGCGACTGGCAAATCCGCAGATCACA...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGCATCAAGGTTGTGCATaGGCCTTGAAATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: DARISSKCNLVTSGHIQQHQGCA*ALKCSQ
Trigger: TTGTGAACATTTCAAGGCGCATGCACAACCTTGATG...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGCATCAAGGTTGTGCATaGGCCTTGAAATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMHQGCA*ALKCSQ
Trigger: TTGTGAACATTTCAAGGCGCATGCACAACCTTGATG...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCCCTCAGAGCATTGCCTaGCAAGCCCGCTATGTTGTT +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGPQSIA*QARYVV
Trigger: AACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGG...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGAACAGTCGACCAATaGTTTCATATCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMRTVDQ*FHISRM
Trigger: CATCCTGCTGATATGAAAGCATTGGTCGACTGTTCT...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCCCACAATTCAACATaGAGAACAGTCGACCAATGC +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAPHNST*RTVDQC
Trigger: GCATTGGTCGACTGTTCTGCATGTTGAATTGTGGGG...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp CATATCAGCAGGATGGTTCGATGCAAGTACACATATCCTGAGCTATCCACAGTCCAAATCAGCCACTGCTaGAGCTGTCCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: HISRMVRCKYTYPELSTVQISHC*SCPFST
Trigger: GGTGCTGAAGGGACAGCTCCAGCAGTGGCTGATTTG...GACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTCGATGCCCAGCCTCTTaGCCGCCAGGTCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: VWALLETSEMLIMNLASFRCPAS*PPGPRR
Trigger: ACGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCG...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCTCAGACCTACAAAATaGCGGGTGAGCTTGAAAATT +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQLRPTK*RVSLKI
Trigger: AATTTTCAAGCTCACCCGCCATTTTGTAGGTCTGAG...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCTTTACAGTTGTTTCATaGACACTGGCCAGTCTACAA +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSFTVVS*TLASLQ
Trigger: TTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAA...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCTCTTTTGATGAGAAATaGCCAAGACTGTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSSFDEK*PRLLTH
Trigger: ATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGA...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCCCGCCTTCATTCTGTaGTCTGCGGATTTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHPAFIL*SADLPV
Trigger: GACTGGCAAATCCGCAGATCACAGAATGAAGGCGGG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGTCTTGCCCATCTCTGTaGCTCAGACATGACTTAACG +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGSCPSL*LRHDLT
Trigger: CGTTAAGTCATGTCTGAGTCACAGAGATGGGCAAGA...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATGGGTGCCCCCGACATTaGGGATCACCCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNGCPRH*GSPSRC
Trigger: ACAACGAGAGGGTGATCCTCAATGTCGGGGGCACCC...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTTCCAGGCAGGGTCTTaGGGGTGCTGCGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYFQAGS*GCCGRF
Trigger: AAACCTACCGCAGCACCCTCAAGACCCTGCCTGGAA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTGGATGACAGCCCACTaGGTCCCACCTCTAAGTAGA +
Preference number: 4 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALWMTAH*VPPLSR
Trigger: TCTACTTAGAGGTGGGACTCAGTGGGCTGTCATCCA...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTTTAGCAGCTTTGGATaGCAGCCCACTGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALFSSFG*QPTESH
Trigger: GTGGGACTCAGTGGGCTGTCATCCAAAGCTGCTAAA...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTCAAACCTTACCACCCTaGGGAAGCCAAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLQTLPP*GSQAHL
Trigger: AAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTG...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGTGCAGTTATCTTTCCTaGTCCCTCCATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGCSYLS*SLHQKH
Trigger: GTGCTTCTGATGGAGGGATCAGGAAAGATAACTGCA...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCGCTTTAAGTGCCTCATaGAGACGCGAGGATCTCTTC +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGALSAS*RREDLF
Trigger: GAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGC...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTTGTGATCTGCGGATTTaGCAGTCGCCAACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGCDLRI*QSPTSA
Trigger: CGCGGAGGTTGGCGACTGGCAAATCCGCAGATCACA...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGCTTCATTCTGTGATCTaGGGATTTGCCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGLHSVI*GFASRQ
Trigger: TTGGCGACTGGCAAATCCGCAGATCACAGAATGAAG...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAEVDCL*PDMCHS
Trigger: AGAGTGACACATGTCTGGGCAAAGACAATCGACTTC...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGTTTATAAGCTTTAAGTaGCTCATGAAGACGCGAGGA +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMFISFK*LMKTRG
Trigger: TCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAA...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTAAGACTGTTGACCCATaGACACATGTTGGTATTTAC +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSKTVDP*THVGIY
Trigger: GTAAATACCAACATGTGTGCATGGGTCAACAGTCTT...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAAGACTGTTGACCCATaGACACATGTTGGTATTTAC +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMKTVDP*THVGIY
Trigger: GTAAATACCAACATGTGTGCATGGGTCAACAGTCTT...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTTTATCATCAAGGTTGTaGATGCGCCTTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSLSSRL*MRLEMF
Trigger: GAACATTTCAAGGCGCATGCACAACCTTGATGATAA...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGTTATCATCAAGGTTGTaGATGCGCCTTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMLSSRL*MRLEMF
Trigger: GAACATTTCAAGGCGCATGCACAACCTTGATGATAA...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGTTATCATCAAGGTTGTaGATGCGCCTTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: DARISSKCNLVTSGHIQQLSSRL*MRLEMF
Trigger: GAACATTTCAAGGCGCATGCACAACCTTGATGATAA...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAACAACATCTCCAACATaGAGGTCATGCTCTAGGACT +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGATTSPT*RSCSRT
Trigger: AGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGT...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTACCATCGCGCAGGGTTaGGCAAACCATGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: EVWALLETSEMLIMNLASTIAQG*ANHGAR
Trigger: CCGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGT...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCATTTTCCGGATTCAGGTaGTTGAGCCGCTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAFSGFR*LSRFPG
Trigger: CCCAGGGAAGCGGCTCAACCACCTGAATCCGGAAAA...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGCTTTGGTTTCCGAGTaGACGAGGTTCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHALVSE*TRFSGQ
Trigger: CTGCCCAGAGAACCTCGTCCACTCGGAAACCAAAGC...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TTATCCCTCTATTTATATTACGGTCTTTTTCTTCCCTCACATGCTCAATACATGGCTTGTCGCCCGCCGTaGTCAAGCAGTCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSLYLYYGLFLPSHAQYMACRPP*SSSRLG
Trigger: CCCCAGGCGACTGCTTGACCACGGCGGGCGACAAGC...CATGTATTGAGCATGTGAGGGAAGAAAAAGACCGTAATATAAATAGAGGGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CAA 72 bp ATCCTGAGCTATCCACAGTCCCCGAACTCTGCAACATaGCTTTCAGGTGATAGAGACAAGATGGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: ILSYPQSPNSAT*LSGDRDKMVHA
Trigger: TGCATGGACCATCTTGTCTCTATCACCTGAAAGCAATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTGGGTGCCCCCGACATTaGGGATCACCCTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: VWALLETSEMLIMNLASFGCPRH*GSPSRC
Trigger: ACAACGAGAGGGTGATCCTCAATGTCGGGGGCACCC...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCAAACCTTACCACCCTaGGGAAGCCAAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSQTLPP*GSQAHL
Trigger: AAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTG...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTGTAGGTGAGCTTGCCTaGGGAGCAGGAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VWALLETSEMLIMNLASFVGELA*GAGGMC
Trigger: GCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTAC...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAATAACTGCTTCTTGTaGATTAGGTTGAGATGCATG +
Preference number: 4 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMNNCFL*IRLRCM
Trigger: CATGCATCTCAACCTAATTCACAAGAAGCAGTTATT...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS-3UTR GCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTCCCCAAATCAGCCACTaGTGGAGCTGTCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCPQISH*WSCPFS
Trigger: GCTGAAGGGACAGCTCCAGCAGTGGCTGATTTGGGG...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCCTTCATTCTGTGATCTaGGGATTTGCCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGLHSVI*GFASRQ
Trigger: TTGGCGACTGGCAAATCCGCAGATCACAGAATGAAG...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGEVDCL*PDMCHS
Trigger: AGAGTGACACATGTCTGGGCAAAGACAATCGACTTC...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACATCAAGGTTGTGCATaGGCCTTGAAATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAHQGCA*ALKCSQ
Trigger: TTGTGAACATTTCAAGGCGCATGCACAACCTTGATG...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTTTTCCGGATTCAGGTaGTTGAGCCGCTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYFSGFR*LSRFPG
Trigger: CCCAGGGAAGCGGCTCAACCACCTGAATCCGGAAAA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTGCTTTGGTTTCCGAGTaGACGAGGTTCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGALVSE*TRFSGQ
Trigger: CTGCCCAGAGAACCTCGTCCACTCGGAAACCAAAGC...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTACGATGCCCAGCCTCTTaGCCGCCAGGTCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLRCPAS*PPGPRR
Trigger: ACGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCG...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTTGTGCCATTGATGACTaGTTCTGTCTTGTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSCAIDD*FCLVFN
Trigger: GTTAAAAACAAGACAGAACCAGTCATCAATGGCACA...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTGTGCCATTGATGACTaGTTCTGTCTTGTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQCAIDD*FCLVFN
Trigger: GTTAAAAACAAGACAGAACCAGTCATCAATGGCACA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTCCAAGTGCAACCTaGTCACATCAGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSLPSAT*SHQGTF
Trigger: GAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAG...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTAGCAGAGCACTCTCATaGGGAGCACCAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLSRALS*GAPDEF
Trigger: GAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCT...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp ATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCTAGGACTTGGGGATATAGTGGGTGGGTGGGTCTaGAGAAGCTATGTGTACCAA +
Preference number: 4 (lower is better)
Translates to: IAVQHLQHAGHALGLGDIVGGWV*RSYVYQ
Trigger: TTGGTACACATAGCTTCTCCAGACCCACCCACCCAC...TATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAAAGACACAAGAGCTTTaGGTGATATTTGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAKTQEL*VIFGTL
Trigger: CAGAGTGCCAAATATCACCCAAAGCTCTTGTGTCTT...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCTGTGACTCAGACATaGCTTAACGAGACCGAGAGA +
Preference number: 4 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALSVTQT*LNETER
Trigger: TCTCTCGGTCTCGTTAAGTCATGTCTGAGTCACAGA...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp AGGTCATGCTCTAGGACTTGGGGATATAGAGTAATACATGTTTCGTGGCCAATATTTAGCAGCTTTGGATaGCAGCCCACTGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RSCSRTWGYRVIHVSWPIFSSFG*QPTESH
Trigger: GTGGGACTCAGTGGGCTGTCATCCAAAGCTGCTAAA...TATTGGCCACGAAACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp ATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCTAGGACTTGGGGATATACAAACCTTACCACCCTaGGGAAGCCAAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: IAVQHLQHAGHALGLGDIQTLPP*GSQAHL
Trigger: AAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTG...TATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTCAAACCTTACCACCCTaGGGAAGCCAAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLQTLPP*GSQAHL
Trigger: AAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTG...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTGAAGGGTCGTTAGGTTaGGCTCCCACTCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: VWALLETSEMLIMNLASFEGSLG*APTLSA
Trigger: TGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTC...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTGTGTGCTCACTAGCTaGAGGGTCGTTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYCVLTS*RVVRLS
Trigger: GCTCAACCTAACGACCCTTCAGCTAGTGAGCACACA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTGCTTTAAGTGCCTCATaGAGACGCGAGGATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSALSAS*RREDLF
Trigger: GAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGC...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCTAGGTAGTAGAAACTaGCACTGCAGCAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHLGSRN*HCSRQP
Trigger: TGGTTGCCTGCTGCAGTGTCAGTTTCTACTACCTAG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp CCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCAGTAATGACTTCCTTGGAAGTTTCTaGTTTGCCATTGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PKSLSKRSGLGLRVTSNDFLGSF*FAIAKE
Trigger: CTCCTTGGCAATGGCAAAGCAGAAACTTCCAAGGAA...GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCTTTCTGGCTAAACAATaGAAGCCTGGCTGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGFLAKQ*KPGWQL
Trigger: TAACTGCCAGCCAGGCTTGCATTGTTTAGCCAGAAA...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCCAACATGCAGGTCATaGTCTAGGACTTGGGGATAT +
Preference number: 4 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSPTCRS*SRTWGY
Trigger: ATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGG...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCAGACCGAGAGAAAAGTaGTTCTGCTTTGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGRPREK*FCFGFR
Trigger: TCGGAAACCAAAGCAGAACCACTTTTCTCTCGGTCT...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTCTTCCAAGTGCAACCTaGTCACATCAGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLLPSAT*SHQGTF
Trigger: GAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAG...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CATATCAGCAGGATGGTTCGATGCAAGTACACATATCCTGAGCTATCCACAGTCGGTTTACAAGATAGATaGGATGGGAGATCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: HISRMVRCKYTYPELSTVGLQDR*DGRSRA
Trigger: CGCTCTCGATCTCCCATCCCATCTATCTTGTAAACC...GACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACTCTGTGACTCAGACATaGCTTAACGAGACCGAGAGA +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHSVTQT*LNETER
Trigger: TCTCTCGGTCTCGTTAAGTCATGTCTGAGTCACAGA...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTTCTGTGACTCAGACATaGCTTAACGAGACCGAGAGA +
Preference number: 4 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSSVTQT*LNETER
Trigger: TCTCTCGGTCTCGTTAAGTCATGTCTGAGTCACAGA...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACTCTTGCCCATCTCTGTaGCTCAGACATGACTTAACG +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHSCPSL*LRHDLT
Trigger: CGTTAAGTCATGTCTGAGTCACAGAGATGGGCAAGA...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTGGATGACAGCCCACTaGGTCCCACCTCTAAGTAGA +
Preference number: 4 (lower is better)
Translates to: EVWALLETSEMLIMNLASWMTAH*VPPLSR
Trigger: TCTACTTAGAGGTGGGACTCAGTGGGCTGTCATCCA...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATTGGATGACAGCCCACTaGGTCCCACCTCTAAGTAGA +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNWMTAH*VPPLSR
Trigger: TCTACTTAGAGGTGGGACTCAGTGGGCTGTCATCCA...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GTATGTCTGGATAAATACATTGCTGTACAACATCTCCAACATGCAGGTCATGCTTGGATGACAGCCCACTaGGTCCCACCTCTAAGTAGA +
Preference number: 4 (lower is better)
Translates to: VCLDKYIAVQHLQHAGHAWMTAH*VPPLSR
Trigger: TCTACTTAGAGGTGGGACTCAGTGGGCTGTCATCCA...AGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATTTAGCAGCTTTGGATaGCAGCCCACTGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKFSSFG*QPTESH
Trigger: GTGGGACTCAGTGGGCTGTCATCCAAAGCTGCTAAA...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTTTAGCAGCTTTGGATaGCAGCCCACTGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCFSSFG*QPTESH
Trigger: GTGGGACTCAGTGGGCTGTCATCCAAAGCTGCTAAA...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACGCTTTAAGTGCCTCATaGAGACGCGAGGATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYALSAS*RREDLF
Trigger: GAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGC...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTAGTGTGGGCCTTACTTaGAACTTCAGAGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLSVGLT*NFRDVD
Trigger: ATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACT...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp ATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCTAGGACTTGGGGATATAGTTGTGCATGCGCCTTaGAATGTTCACAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: IAVQHLQHAGHALGLGDIVVHAP*NVHKRS
Trigger: GGACCTTTTGTGAACATTTCAAGGCGCATGCACAAC...TATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp AGGTCATGCTCTAGGACTTGGGGATATAGAGTAATACATGTTTCGTGGCCAATACACAAGAGCTTTGGGTaGTATTTGGCACTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RSCSRTWGYRVIHVSWPIHKSFG*YLALCL
Trigger: GAGGCAGAGTGCCAAATATCACCCAAAGCTCTTGTG...TATTGGCCACGAAACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp CGATGCAAGTACACATATCCTGAGCTATCCACAGTCCCCGAACTCTGCAACATTAACCAAGTGCAATGGTaGAATTGCTGCTTAAACCCT +
Preference number: 4 (lower is better)
Translates to: RCKYTYPELSTVPELCNINQVQW*NCCLNP
Trigger: AGGGTTTAAGCAGCAATTTCACCATTGCACTTGGTT...AATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAGGATATGTGTACTTGCATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGCCCCAAATCAGCCACTaGTGGAGCTGTCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FKEVWALLETSEMLIMNLPQISH*WSCPFS
Trigger: GCTGAAGGGACAGCTCCAGCAGTGGCTGATTTGGGG...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCTTCATTCTGTGATCTaGGGATTTGCCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHLHSVI*GFASRQ
Trigger: TTGGCGACTGGCAAATCCGCAGATCACAGAATGAAG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALEVDCL*PDMCHS
Trigger: AGAGTGACACATGTCTGGGCAAAGACAATCGACTTC...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAAGACTGTTGACCCATaGACACATGTTGGTATTTAC +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGKTVDP*THVGIY
Trigger: GTAAATACCAACATGTGTGCATGGGTCAACAGTCTT...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CTGAGCTATCCACAGTCCCCGAACTCTGCAACATTGCTTTCAGGTGATAGAGACTTATCATCAAGGTTGTaGATGCGCCTTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: LSYPQSPNSATLLSGDRDLSSRL*MRLEMF
Trigger: GAACATTTCAAGGCGCATGCACAACCTTGATGATAA...GTCTCTATCACCTGAAAGCAATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTGAAAAGTGCCCTCCCTaGCCCACAATTCAACATGCA +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGEKCPP*PTIQHA
Trigger: TGCATGTTGAATTGTGGGGCAGGGAGGGCACTTTTC...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACAAAGTGGTTCTGCTTTaGTTTCCGAGTGGACGAGGT +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHKVVLL*FPSGRG
Trigger: ACCTCGTCCACTCGGAAACCAAAGCAGAACCACTTT...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTAAAGTGGTTCTGCTTTaGTTTCCGAGTGGACGAGGT +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLKVVLL*FPSGRG
Trigger: ACCTCGTCCACTCGGAAACCAAAGCAGAACCACTTT...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATCTTCCAAGTGCAACCTaGTCACATCAGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: YISITALSNSQHNLMWAHLPSAT*SHQGTF
Trigger: GAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAG...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGTTTACAGTTGTTTCATaGACACTGGCCAGTCTACAA +
Preference number: 4 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGFTVVS*TLASLQ
Trigger: TTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAA...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR CAA 72 bp TTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGACAACCTCTTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: FPKSLSKRSGLG*RVTSNDNLFAV
Trigger: AACTGCAAAGAGGTTGTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTTCTGTGACTCAGACATaGCTTAACGAGACCGAGAGA +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGSVTQT*LNETER
Trigger: TCTCTCGGTCTCGTTAAGTCATGTCTGAGTCACAGA...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTATTCCAGGCAGGGTCTTaGGGGTGCTGCGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLFQAGS*GCCGRF
Trigger: AAACCTACCGCAGCACCCTCAAGACCCTGCCTGGAA...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GTATGTCTGGATAAATACATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCAAACCTTACCACCCTaGGGAAGCCAAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: VCLDKYIAVQHLQHAGHAQTLPP*GSQAHL
Trigger: AAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTG...AGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTGCTTTAAGTGCCTCATaGAGACGCGAGGATCTCTTC +
Preference number: 4 (lower is better)
Translates to: EVWALLETSEMLIMNLASALSAS*RREDLF
Trigger: GAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGC...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTGTTGTGCATGCGCCTTaGAATGTTCACAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGVVHAP*NVHKRS
Trigger: GGACCTTTTGTGAACATTTCAAGGCGCATGCACAAC...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAACAAGTACACATATCCTaGGCTATCCACAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKQVHIS*AIHSPR
Trigger: TCGGGGACTGTGGATAGCTCAGGATATGTGTACTTG...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp TTATCCCTCTATTTATATTACGGTCTTTTTCTTCCCTCACATGCTCAATACATGCCCCAAATCAGCCACTaGTGGAGCTGTCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSLYLYYGLFLPSHAQYMPQISH*WSCPFS
Trigger: GCTGAAGGGACAGCTCCAGCAGTGGCTGATTTGGGG...CATGTATTGAGCATGTGAGGGAAGAAAAAGACCGTAATATAAATAGAGGGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCATTTTTGAACTGTGTGTaGTCACTAGCTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAFLNCV*SLAEGS
Trigger: CGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAA...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACTTTTTGAACTGTGTGTaGTCACTAGCTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHFLNCV*SLAEGS
Trigger: CGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAA...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCATTCCTTGGAAGTTTCTaGTTTGCCATTGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAFLGSF*FAIAKE
Trigger: CTCCTTGGCAATGGCAAAGCAGAAACTTCCAAGGAA...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHEVDCL*PDMCHS
Trigger: AGAGTGACACATGTCTGGGCAAAGACAATCGACTTC...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCAGTAATGACTTCTCTCATGTTTTGTaGCTTCCCCAAGTCATTAAG +
Preference number: 4 (lower is better)
Translates to: PKSLSKRSGLGLRVTSNDFSHVL*LPQVIK
Trigger: CTTAATGACTTGGGGAAGGCACAAAACATGAGAGAA...GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTTTTATAAGCTTTAAGTaGCTCATGAAGACGCGAGGA +
Preference number: 4 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLFISFK*LMKTRG
Trigger: TCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAA...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCGAACTCTGCAACATTaGTTTCAGGTGATAGAGACA +
Preference number: 4 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSRTLQH*FQVIET
Trigger: TGTCTCTATCACCTGAAAGCAATGTTGCAGAGTTCG...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTAGCAGGATGGTTCGATaGAAGTACACATATCCTGAG +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLSRMVR*KYTYPE
Trigger: CTCAGGATATGTGTACTTGCATCGAACCATCCTGCT...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCAGCAGGCAACCAAGTaGAATGGTGAAATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGQQATK*NGEIAA
Trigger: AGCAGCAATTTCACCATTGCACTTGGTTGCCTGCTG...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCGAGTGTAGTAATGAATaGTGGTTGCTAGGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGECSNE*WLLGSR
Trigger: TCTACTACCTAGCAACCAGCATTCATTACTACACTC...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATCGAGAAACTACTTGTTaGCGTTTTCCGGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: GYHQGCACALKCSQKVHDRETTC*RFPDSG
Trigger: ACCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCG...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCGAGAAACTACTTGTTaGCGTTTTCCGGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHRETTC*RFPDSG
Trigger: ACCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTAGACCGAGAGAAAAGTaGTTCTGCTTTGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLRPREK*FCFGFR
Trigger: TCGGAAACCAAAGCAGAACCACTTTTCTCTCGGTCT...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAAGACCGAGAGAAAAGTaGTTCTGCTTTGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRARPREK*FCFGFR
Trigger: TCGGAAACCAAAGCAGAACCACTTTTCTCTCGGTCT...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCCTCAGACCTACAAAATaGCGGGTGAGCTTGAAAATT +
Preference number: 4 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALLRPTK*RVSLKI
Trigger: AATTTTCAAGCTCACCCGCCATTTTGTAGGTCTGAG...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp ATGACAACCTCTTTGCAGTTATCTTTCCTGATCCCTCCATCAGAAGCACACGTGCTCAGACCTACAAAATaGCGGGTGAGCTTGAAAATT +
Preference number: 4 (lower is better)
Translates to: MTTSLQLSFLIPPSEAHVLRPTK*RVSLKI
Trigger: AATTTTCAAGCTCACCCGCCATTTTGTAGGTCTGAG...CACGTGTGCTTCTGATGGAGGGATCAGGAAAGATAACTGCAAAGAGGTTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS-3UTR CCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTCTTCCAAGTGCAACCTaGTCACATCAGGGCACATTC +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCLPSAT*SHQGTF
Trigger: GAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAG...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTGTGGGTGGGTGGGTCTaGAGAAGCTATGTGTACCAA +
Preference number: 4 (lower is better)
Translates to: VWALLETSEMLIMNLASFVGGWV*RSYVYQ
Trigger: TTGGTACACATAGCTTCTCCAGACCCACCCACCCAC...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATCAATGCAAGCCTGGCTaGCAGTTACCTTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: YISITALSNSQHNLMWAHQCKPG*QLPFSH
Trigger: ATGAGAGAAAGGTAACTGCCAGCCAGGCTTGCATTG...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATCCAAGCAGCAATTTCTaGCTAAACAATGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GYHQGCACALKCSQKVHDPSSNF*LNNASL
Trigger: CAGGCTTGCATTGTTTAGCCAGAAATTGCTGCTTGG...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp CTGAGCTATCCACAGTCCCCGAACTCTGCAACATTGCTTTCAGGTGATAGAGACTGTAGTAATGAATGCTaGTTGCTAGGTAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LSYPQSPNSATLLSGDRDCSNEC*LLGSRN
Trigger: GTTTCTACTACCTAGCAACCAGCATTCATTACTACA...GTCTCTATCACCTGAAAGCAATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATCTTGCCCATCTCTGTaGCTCAGACATGACTTAACG +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKSCPSL*LRHDLT
Trigger: CGTTAAGTCATGTCTGAGTCACAGAGATGGGCAAGA...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR TCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGCAGTTATCTTTCCTaGTCCCTCCATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCCSYLS*SLHQKH
Trigger: GTGCTTCTGATGGAGGGATCAGGAAAGATAACTGCA...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000647764.1
CDS-3UTR TCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTAGTGTGGGCCTTACTTaGAACTTCAGAGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLSVGLT*NFRDVD
Trigger: ATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACT...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAAGTGTGGGCCTTACTTaGAACTTCAGAGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRASVGLT*NFRDVD
Trigger: ATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACT...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCCTAATGTGGGCCCATaGAGAGTAATTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHPNVGP*RVIQRS
Trigger: ACTTCTTTGAATTACTCTTCATGGGCCCACATTAGG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAAGTTGTGCATGCGCCTTaGAATGTTCACAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKVVHAP*NVHKRS
Trigger: GGACCTTTTGTGAACATTTCAAGGCGCATGCACAAC...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GTATGTCTGGATAAATACATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCATATTTTTCTTCCGTaGAGCTCTGTCTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: VCLDKYIAVQHLQHAGHAHIFLP*SSVSTL
Trigger: GAGGGTGGAGACAGAGCTTCACGGAAGAAAAATATG...AGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGCACTGGTCAATATCTaGCACTATCTGTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLALVNI*HYLSFY
Trigger: ATAAAATGACAGATAGTGTCAGATATTGACCAGTGC...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACCACATGCTCAATACATaGGACACGCTATTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYHMLNT*DTLLLL
Trigger: CAACAGCAATAGCGTGTCTCATGTATTGAGCATGTG...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTTTTTGAACTGTGTGTaGTCACTAGCTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYFLNCV*SLAEGS
Trigger: CGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTTTTTTGAACTGTGTGTaGTCACTAGCTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGFLNCV*SLAEGS
Trigger: CGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAA...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACTGGAAGTTTCTGCTTTaGCATTGCCAAGGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHWKFLL*HCQGVV
Trigger: TACTACTCCTTGGCAATGGCAAAGCAGAAACTTCCA...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYEVDCL*PDMCHS
Trigger: AGAGTGACACATGTCTGGGCAAAGACAATCGACTTC...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp AGGTCATGCTCTAGGACTTGGGGATATAGAGTAATACATGTTTCGTGGCCAATAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: RSCSRTWGYRVIHVSWPIEVDCL*PDMCHS
Trigger: AGAGTGACACATGTCTGGGCAAAGACAATCGACTTC...TATTGGCCACGAAACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTTTCTCTCATGTTTTGTaGCTTCCCCAAGTCATTAAG +
Preference number: 4 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSFSHVL*LPQVIK
Trigger: CTTAATGACTTGGGGAAGGCACAAAACATGAGAGAA...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACCATCAAGGTTGTGCATaGGCCTTGAAATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: TGYHQGCACALKCSQKVHHQGCA*ALKCSQ
Trigger: TTGTGAACATTTCAAGGCGCATGCACAACCTTGATG...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAAGAGCCTCAGAGCATTaGCTGCCAAGCCCGCTATGT +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLRASEH*LPSPLC
Trigger: ACATAGCGGGCTTGGCAGGCAATGCTCTGAGGCTCT...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp ATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCTAGGACTTGGGGATATAACAAGTCATGTCGTGTaGAATCAAGATAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: IAVQHLQHAGHALGLGDITSHVV*NQDRIP
Trigger: TGGGATCCTATCTTGATTGCACACGACATGACTTGT...TATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTACAACATCTCCAACATaGAGGTCATGCTCTAGGACT +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGTTSPT*RSCSRT
Trigger: AGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGT...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCTGTGCCATTGATGACTaGTTCTGTCTTGTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGCAIDD*FCLVFN
Trigger: GTTAAAAACAAGACAGAACCAGTCATCAATGGCACA...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTCTCAGACCTACAAAATaGCGGGTGAGCTTGAAAATT +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLLRPTK*RVSLKI
Trigger: AATTTTCAAGCTCACCCGCCATTTTGTAGGTCTGAG...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAGCTTTGGGTGATATTTaGCACTCTGCCTCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAALGDI*HSASEN
Trigger: ATTTTCAGAGGCAGAGTGCCAAATATCACCCAAAGC...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp CATATCAGCAGGATGGTTCGATGCAAGTACACATATCCTGAGCTATCCACAGTCCATTTCTGTGCTTCATaGAGACAGATGGCATATACA +
Preference number: 4 (lower is better)
Translates to: HISRMVRCKYTYPELSTVHFCAS*RQMAYT
Trigger: TGTATATGCCATCTGTCTCCATGAAGCACAGAAATG...GACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
3UTR CAA 72 bp ATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTaGAAATGTTCACAAAAGGTCCACGATACAGGGATT +
Preference number: 4 (lower is better)
Translates to: ISTGYHQGCACA*KCSQKVHDTGI
Trigger: AATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GTATGTCTGGATAAATACATTGCTGTACAACATCTCCAACATGCAGGTCATGCTTTTCATATCCTTTCCTaGTCCCTCCATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: VCLDKYIAVQHLQHAGHAFHILS*SLHQKH
Trigger: GTGCTTCTGATGGAGGGATCAGGAAAGGATATGAAA...AGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAAAGGTGAAGTCGCCCTaGTCGGATTCCATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLKVKSP*SDSICR
Trigger: TCTGCAGATGGAATCCGAGCAGGGCGACTTCACCTT...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTAGAGAAAAGTGGTTCTaGTTTGGTTTCCGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: EVWALLETSEMLIMNLASREKWF*FGFRVD
Trigger: GTCCACTCGGAAACCAAAGCAGAACCACTTTTCTCT...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTTTTTGAACTGTGTGTaGTCACTAGCTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCFLNCV*SLAEGS
Trigger: CGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAA...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATTGGAAGTTTCTGCTTTaGCATTGCCAAGGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: YISITALSNSQHNLMWAHWKFLL*HCQGVV
Trigger: TACTACTCCTTGGCAATGGCAAAGCAGAAACTTCCA...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATTTCCTTGGAAGTTTCTaGTTTGCCATTGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNFLGSF*FAIAKE
Trigger: CTCCTTGGCAATGGCAAAGCAGAAACTTCCAAGGAA...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCATTCTCTCATGTTTTGTaGCTTCCCCAAGTCATTAAG +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAFSHVL*LPQVIK
Trigger: CTTAATGACTTGGGGAAGGCACAAAACATGAGAGAA...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATTTTATAAGCTTTAAGTaGCTCATGAAGACGCGAGGA +
Preference number: 4 (lower is better)
Translates to: GYHQGCACALKCSQKVHDFISFK*LMKTRG
Trigger: TCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAA...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATAGACCGAGAGAAAAGTaGTTCTGCTTTGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNRPREK*FCFGFR
Trigger: TCGGAAACCAAAGCAGAACCACTTTTCTCTCGGTCT...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTTCTTTTGATGAGAAATaGCCAAGACTGTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLSFDEK*PRLLTH
Trigger: ATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGA...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp ATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCTAGGACTTGGGGATATATCTTTTGATGAGAAATaGCCAAGACTGTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: IAVQHLQHAGHALGLGDISFDEK*PRLLTH
Trigger: ATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGA...TATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
3UTR CAA 72 bp TCTTCCACTCAGACTGAATATGACTCCCTAAGGATTTaGTTGGAGTGTAGTAATGAATGCTGGTTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: SSTQTEYDSLRI*LECSNECWLLG
Trigger: ACCTAGCAACCAGCATTCATTACTACACTCCAACAAAATCCTTAGGGAGTCATATTCAGTCTGAGTGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTAGTGTGGGCCTTACTTaGAACTTCAGAGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCSVGLT*NFRDVD
Trigger: ATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACT...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAACCTAATGTGGGCCCATaGAGAGTAATTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKPNVGP*RVIQRS
Trigger: ACTTCTTTGAATTACTCTTCATGGGCCCACATTAGG...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTCCTAATGTGGGCCCATaGAGAGTAATTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCPNVGP*RVIQRS
Trigger: ACTTCTTTGAATTACTCTTCATGGGCCCACATTAGG...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR TCA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTCCTAATGTGGGCCCATaGAGAGTAATTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: EVWALLETSEMLIMNLASPNVGP*RVIQRS
Trigger: ACTTCTTTGAATTACTCTTCATGGGCCCACATTAGG...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGGAAGTTTCTGCTTTaGCATTGCCAAGGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: SVSYISTGYHQGCACALKWKFLL*HCQGVV
Trigger: TACTACTCCTTGGCAATGGCAAAGCAGAAACTTCCA...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATTGGAAGTTTCTGCTTTaGCATTGCCAAGGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNWKFLL*HCQGVV
Trigger: TACTACTCCTTGGCAATGGCAAAGCAGAAACTTCCA...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATTTATCATCAAGGTTGTaGATGCGCCTTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: YISITALSNSQHNLMWAHLSSRL*MRLEMF
Trigger: GAACATTTCAAGGCGCATGCACAACCTTGATGATAA...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGAAAGTGGTTCTGCTTTaGTTTCCGAGTGGACGAGGT +
Preference number: 4 (lower is better)
Translates to: FKEVWALLETSEMLIMNLKVVLL*FPSGRG
Trigger: ACCTCGTCCACTCGGAAACCAAAGCAGAACCACTTT...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTCTCAGACCTACAAAATaGCGGGTGAGCTTGAAAATT +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCLRPTK*RVSLKI
Trigger: AATTTTCAAGCTCACCCGCCATTTTGTAGGTCTGAG...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATCTCAGACCTACAAAATaGCGGGTGAGCTTGAAAATT +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNLRPTK*RVSLKI
Trigger: AATTTTCAAGCTCACCCGCCATTTTGTAGGTCTGAG...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTAAAGTTCCAATGAAGTaGTTGGCATTTGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGKVPMK*LAFGST
Trigger: TGTGCTTCCAAATGCCAACCACTTCATTGGAACTTT...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp TGCTTCATGGAGACAGATGGCATATACAGGAAAGACAGGGAGCTAAGACAGACACAGACATCTTCAGAATaGTTTACAGTCACAAGAAAT +
Preference number: 4 (lower is better)
Translates to: CFMETDGIYRKDRELRQTQTSSE*FTVTRN
Trigger: ATTTCTTGTGACTGTAAACCATTCTGAAGATGTCTG...TGTCTGTCTTAGCTCCCTGTCTTTCCTGTATATGCCATCTGTCTCCATGAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp AAAGCCTGGGTAAGATTCATTAGCTACCCAAGTGGCATTTCTGACTTCAAATTGCTTCATGGAGACAGATaGCATATACAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: KAWVRFISYPSGISDFKLLHGDR*HIQERQ
Trigger: CTGTCTTTCCTGTATATGCCATCTGTCTCCATGAAG...CAATTTGAAGTCAGAAATGCCACTTGGGTAGCTAATGAATCTTACCCAGGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATCCCAAGTGGCATTTCTaGCTTCAAATTGTAGTATCA +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNPKWHF*LQIVVS
Trigger: TGATACTACAATTTGAAGTCAGAAATGCCACTTGGG...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGTCTTGTGAATTAGGTTaGGATGCATGGCACCATGTG +
Preference number: 4 (lower is better)
Translates to: FKEVWALLETSEMLIMNLSCELG*DAWHHV
Trigger: CACATGGTGCCATGCATCTCAACCTAATTCACAAGA...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS-3UTR TCA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGGAGTTTAGGCCTTTaGAATGTAAGCATCCATTCT +
Preference number: 4 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCWSLGL*NVSIHS
Trigger: AGAATGGATGCTTACATTTCAAAGGCCTAAACTCCA...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS-3UTR GCA 90 bp GTGCCGATTAACTTAGGTAGTCTACAGAGCATCATTAATTTATACACAAAGCAGTTTTTGAACTGTGTGTaGTCACTAGCTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: VPINLGSLQSIINLYTKQFLNCV*SLAEGS
Trigger: CGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAA...CTGCTTTGTGTATAAATTAATGATGCTCTGTAGACTACCTAAGTTAATCGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTCTCTCATGTTTTGTaGCTTCCCCAAGTCATTAAG +
Preference number: 4 (lower is better)
Translates to: EVWALLETSEMLIMNLASFSHVL*LPQVIK
Trigger: CTTAATGACTTGGGGAAGGCACAAAACATGAGAGAA...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR GCA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATTTTATAAGCTTTAAGTaGCTCATGAAGACGCGAGGA +
Preference number: 4 (lower is better)
Translates to: CACALKCSQKVHDTGIYNFISFK*LMKTRG
Trigger: TCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAA...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTAAGACTGTTGACCCATaGACACATGTTGGTATTTAC +
Preference number: 4 (lower is better)
Translates to: EVWALLETSEMLIMNLASKTVDP*THVGIY
Trigger: GTAAATACCAACATGTGTGCATGGGTCAACAGTCTT...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCATTGCTGCTTAAACCCTaGTTATCAAAAAGATTCACA +
Preference number: 4 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRALLLKP*LSKRFT
Trigger: TGTGAATCTTTTTGATAAGCAGGGTTTAAGCAGCAA...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp TTATCCCTCTATTTATATTACGGTCTTTTTCTTCCCTCACATGCTCAATACATGCCAACATGCAGGTCATaGTCTAGGACTTGGGGATAT +
Preference number: 4 (lower is better)
Translates to: LSLYLYYGLFLPSHAQYMPTCRS*SRTWGY
Trigger: ATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGG...CATGTATTGAGCATGTGAGGGAAGAAAAAGACCGTAATATAAATAGAGGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTGTGCCATTGATGACTaGTTCTGTCTTGTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYCAIDD*FCLVFN
Trigger: GTTAAAAACAAGACAGAACCAGTCATCAATGGCACA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp GTATGTCTGGATAAATACATTGCTGTACAACATCTCCAACATGCAGGTCATGCTTTCATATCAGCAGGATaGTTCGATGCAAGTACACAT +
Preference number: 4 (lower is better)
Translates to: VCLDKYIAVQHLQHAGHAFISAG*FDASTH
Trigger: ATGTGTACTTGCATCGAACCATCCTGCTGATATGAA...AGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp GTGCCGATTAACTTAGGTAGTCTACAGAGCATCATTAATTTATACACAAAGCAGCCTAATGTGGGCCCATaGAGAGTAATTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VPINLGSLQSIINLYTKQPNVGP*RVIQRS
Trigger: ACTTCTTTGAATTACTCTTCATGGGCCCACATTAGG...CTGCTTTGTGTATAAATTAATGATGCTCTGTAGACTACCTAAGTTAATCGGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTATTCCTTGGAAGTTTCTaGTTTGCCATTGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLFLGSF*FAIAKE
Trigger: CTCCTTGGCAATGGCAAAGCAGAAACTTCCAAGGAA...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTAAGACTGTTGACCCATaGACACATGTTGGTATTTAC +
Preference number: 4 (lower is better)
Translates to: VWALLETSEMLIMNLASFKTVDP*THVGIY
Trigger: GTAAATACCAACATGTGTGCATGGGTCAACAGTCTT...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGCATCAAGGTTGTGCATaGGCCTTGAAATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: FKEVWALLETSEMLIMNLHQGCA*ALKCSQ
Trigger: TTGTGAACATTTCAAGGCGCATGCACAACCTTGATG...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTATGGAAGTTTCTGCTTTaGCATTGCCAAGGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLWKFLL*HCQGVV
Trigger: TACTACTCCTTGGCAATGGCAAAGCAGAAACTTCCA...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGTTTACAGTTGTTTCATaGACACTGGCCAGTCTACAA +
Preference number: 4 (lower is better)
Translates to: FKEVWALLETSEMLIMNLFTVVS*TLASLQ
Trigger: TTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAA...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
3UTR CAA 72 bp TGCACTGGTCAATATCTGACACTATCTGTCATTTTATaGCAAAAGGATATCAGGGCAATTAATAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: CTGQYLTLSVIL*QKDIRAINRRD
Trigger: ATCCCTCCTATTAATTGCCCTGATATCCTTTTGCAATAAAATGACAGATAGTGTCAGATATTGACCAGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR TCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTATTCTGTGAACACCAGTaGCATTTGATGTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLFCEHQ*HLMFAQ
Trigger: TTGTGCAAACATCAAATGTCACTGGTGTTCACAGAA...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR GCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAAAGACTGTTGACCCATaGACACATGTTGGTATTTAC +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLKTVDP*THVGIY
Trigger: GTAAATACCAACATGTGTGCATGGGTCAACAGTCTT...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR GCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTATTATCATCAAGGTTGTaGATGCGCCTTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLLSSRL*MRLEMF
Trigger: GAACATTTCAAGGCGCATGCACAACCTTGATGATAA...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGTGTGCCATTGATGACTaGTTCTGTCTTGTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: FKEVWALLETSEMLIMNLCAIDD*FCLVFN
Trigger: GTTAAAAACAAGACAGAACCAGTCATCAATGGCACA...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp GTGCCGATTAACTTAGGTAGTCTACAGAGCATCATTAATTTATACACAAAGCAGTGTGCCATTGATGACTaGTTCTGTCTTGTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: VPINLGSLQSIINLYTKQCAIDD*FCLVFN
Trigger: GTTAAAAACAAGACAGAACCAGTCATCAATGGCACA...CTGCTTTGTGTATAAATTAATGATGCTCTGTAGACTACCTAAGTTAATCGGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CCA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTATCTTTTGATGAGAAATaGCCAAGACTGTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: TKLYYISITALSNSQHNLSFDEK*PRLLTH
Trigger: ATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGA...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CCA 90 bp GTGCCGATTAACTTAGGTAGTCTACAGAGCATCATTAATTTATACACAAAGCAGACAATCTTTAAAGCCTaGGTAAGATTCATTAGCTAC +
Preference number: 4 (lower is better)
Translates to: VPINLGSLQSIINLYTKQTIFKA*VRFISY
Trigger: GTAGCTAATGAATCTTACCCAGGCTTTAAAGATTGT...CTGCTTTGTGTATAAATTAATGATGCTCTGTAGACTACCTAAGTTAATCGGCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS GCA 90 bp CGCCACCGGGATGGTCGCTGGCCCTGCCGCCGCGGGAACTGCAGTTaGCCGCGCCGCCCTCGAAGCAGCCGCCTGGCCCGGGGGACAGCG +
Preference number: 5 (lower is better)
Translates to: RHRDGRWPCRRGNCS*PRRPRSSRLARGTA
Trigger: CGCTGTCCCCCGGGCCAGGCGGCTGCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTGGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS CCA 90 bp GCCTGGCCCGGGGGACAGCGGGGGCGCTCTCGGCGGCGGCGACAGTaGAGGCGGCGACGGCTGCAGCTTGTCGCCCGCCGTGGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: AWPGGQRGRSRRRRQ*RRRRLQLVARRGQA
Trigger: TGCTTGACCACGGCGGGCGACAAGCTGCAGCCGTCGCCGCCTCCACTGTCGCCGCCGCCGAGAGCGCCCCCGCTGTCCCCCGGGCCAGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 90 bp GGTCGAAGAAGAACTCGCGGCCGCCACCGGGATGGTCGCTGGCCCTaGCGCCGCGGGAACTGCAGTTGCCCGCGCCGCCCTCGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GRRRTRGRHRDGRWP*RRGNCSCPRRPRSS
Trigger: GCTGCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTGGCGGCCGCGAGTTCTTCTTCGACC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 90 bp CAGGGTTGGGCAAACCATGGAGCTCGGGGCGGGTCCAGCCGGCACTaGCCGACCCCTCCGGGAGCGGGCAGATCGGCTGGCCGTGAATGG +
Preference number: 5 (lower is better)
Translates to: QGWANHGARGGSSRH*PTPPGAGRSAGREW
Trigger: CCATTCACGGCCAGCCGATCTGCCCGCTCCCGGAGGGGTCGGGCAGTGCCGGCTGGACCCGCCCCGAGCTCCATGGTTTGCCCAACCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS GCA 90 bp CCCCCGCCGGCCGCCGGCCGCGCTCCCCGCCTTCATTCTGTGATCTaGGGATTTGCCAGTCGCCAACCTCCGCGCCCAGAGTCACCATCG +
Preference number: 5 (lower is better)
Translates to: PPPAAGRAPRLHSVI*GFASRQPPRPESPS
Trigger: CGATGGTGACTCTGGGCGCGGAGGTTGGCGACTGGCAAATCCGCAGATCACAGAATGAAGGCGGGGAGCGCGGCCGGCGGCCGGCGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CCA 90 bp TGCCAGTCGCCAACCTCCGCGCCCAGAGTCACCATCGCGCAGGGTTaGGCAAACCATGGAGCTCGGGGCGGGTCCAGCCGGCACTGCCCG +
Preference number: 5 (lower is better)
Translates to: CQSPTSAPRVTIAQG*ANHGARGGSSRHCP
Trigger: CGGGCAGTGCCGGCTGGACCCGCCCCGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGTGACTCTGGGCGCGGAGGTTGGCGACTGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS TCA 90 bp CCGGCACTGCCCGACCCCTCCGGGAGCGGGCAGATCGGCTGGCCGTaGATGGAGTGGAGACTGGCCGCAGGTCAGGAGAGCTCACCACTT +
Preference number: 5 (lower is better)
Translates to: PALPDPSGSGQIGWP*MEWRLAAGQESSPL
Trigger: AAGTGGTGAGCTCTCCTGACCTGCGGCCAGTCTCCACTCCATTCACGGCCAGCCGATCTGCCCGCTCCCGGAGGGGTCGGGCAGTGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS GCA 90 bp GGCCGCCGGCCGCGCTCCCCGCCTTCATTCTGTGATCTGCGGATTTaGCAGTCGCCAACCTCCGCGCCCAGAGTCACCATCGCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: GRRPRSPPSFCDLRI*QSPTSAPRVTIAQG
Trigger: ACCCTGCGCGATGGTGACTCTGGGCGCGGAGGTTGGCGACTGGCAAATCCGCAGATCACAGAATGAAGGCGGGGAGCGCGGCCGGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CCA 90 bp CACTGCCCGACCCCTCCGGGAGCGGGCAGATCGGCTGGCCGTGAATaGAGTGGAGACTGGCCGCAGGTCAGGAGAGCTCACCACTTGAAG +
Preference number: 5 (lower is better)
Translates to: HCPTPPGAGRSAGRE*SGDWPQVRRAHHLK
Trigger: CTTCAAGTGGTGAGCTCTCCTGACCTGCGGCCAGTCTCCACTCCATTCACGGCCAGCCGATCTGCCCGCTCCCGGAGGGGTCGGGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCCGCGGGAACTGCAGTaGCCCGCGCCGCCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSPRELQ*PAPPSK
Trigger: CTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGG...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCTCCAGCGGCCAGATTaGCCGTCGGGGCCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQLQRPD*PSGPPS
Trigger: GCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGAG...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS CCA 90 bp CATCAACCTCCCGCCGCCATCCGAAGCACAGGGCTCAGGAAAGAGTaGGTGGGTGGGTCTGGAGAAGCTATGTGTACCAACCAGGTTCAC +
Preference number: 5 (lower is better)
Translates to: HQPPAAIRSTGLRKE*VGGSGEAMCTNQVH
Trigger: GTGAACCTGGTTGGTACACATAGCTTCTCCAGACCCACCCACCCACTCTTTCCTGAGCCCTGTGCTTCGGATGGCGGCGGGAGGTTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS TCA 90 bp GATGGGAGATCGAGAGCGCCTCAGAGGACAAGGAGAGTTGTAGGGTaGTGTTACTGGAGAGAGCCTCAGAGCATTGCCTGCCAAGCCCGC +
Preference number: 5 (lower is better)
Translates to: DGRSRAPQRTRRVVG*CYWREPQSIACQAR
Trigger: GCGGGCTTGGCAGGCAATGCTCTGAGGCTCTCTCCAGTAACATCACCCTACAACTCTCCTTGTCCTCTGAGGCGCTCTCGATCTCCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540018.5
ENST00000549446.6
CDS-3UTR CAA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCGGCGACGGCTGCAGCTaGTCGCCCGCCGTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGGDGCS*SPAVVK
Trigger: CTTGACCACGGCGGGCGACAAGCTGCAGCCGTCGCC...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCGCACTGGCATGGCTATaGTCAGCACTCCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSALAWL*SALQPE
Trigger: CTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGC...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 90 bp CTCGGATTCCATCTGCAGATTTTGTTTCTCCCCCAAATCAGCCACTaGTGGAGCTGTCCCTTCAGCACCACTCGCCATCAACCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: LGFHLQILFLPQISH*WSCPFSTTRHQPPA
Trigger: GGCGGGAGGTTGATGGCGAGTGGTGCTGAAGGGACAGCTCCAGCAGTGGCTGATTTGGGGGAGAAACAAAATCTGCAGATGGAATCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGTCCGGATTCAGGTGGTaGAGCCGCTTCCCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGSGFRW*SRFPGR
Trigger: GCGCCCAGGGAAGCGGCTCAACCACCTGAATCCGGA...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACGGGTGCCCCCGACATaGAGGATCACCCTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SCFMDTGQSTSRALSWGARVPPT*RITLSL
Trigger: CAACGAGAGGGTGATCCTCAATGTCGGGGGCACCCG...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TGCTTCATGGAGACAGATGGCATATACAGGAAAGACAGGGAGCTAAGACAGACAGGCGACGGCTGCAGCTaGTCGCCCGCCGTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: CFMETDGIYRKDRELRQTGDGCS*SPAVVK
Trigger: CTTGACCACGGCGGGCGACAAGCTGCAGCCGTCGCC...TGTCTGTCTTAGCTCCCTGTCTTTCCTGTATATGCCATCTGTCTCCATGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATCCGCGGGAACTGCAGTaGCCCGCGCCGCCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: GYHQGCACALKCSQKVHDPRELQ*PAPPSK
Trigger: CTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGG...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTGCACTGGCATGGCTATaGTCAGCACTCCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSALAWL*SALQPE
Trigger: CTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGC...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 90 bp TGGCCGCAGGTCAGGAGAGCTCACCACTTGAAGGTGAAGTCGCCCTaGTCGGATTCCATCTGCAGATTTTGTTTCTCCCCCAAATCAGCC +
Preference number: 5 (lower is better)
Translates to: WPQVRRAHHLKVKSP*SDSICRFCFSPKSA
Trigger: GGCTGATTTGGGGGAGAAACAAAATCTGCAGATGGAATCCGAGCAGGGCGACTTCACCTTCAAGTGGTGAGCTCTCCTGACCTGCGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGCACCATCGCGCAGGGTaGGGCAAACCATGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGHHRAG*GKPWSS
Trigger: CGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGTG...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCTCCGGATTCAGGTGGTaGAGCCGCTTCCCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGSGFRW*SRFPGR
Trigger: GCGCCCAGGGAAGCGGCTCAACCACCTGAATCCGGA...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp CGATGCAAGTACACATATCCTGAGCTATCCACAGTCCCCGAACTCTGCAACATTTCCGGATTCAGGTGGTaGAGCCGCTTCCCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: RCKYTYPELSTVPELCNISGFRW*SRFPGR
Trigger: GCGCCCAGGGAAGCGGCTCAACCACCTGAATCCGGA...AATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAGGATATGTGTACTTGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAGGCGACGGCTGCAGCTaGTCGCCCGCCGTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAGDGCS*SPAVVK
Trigger: CTTGACCACGGCGGGCGACAAGCTGCAGCCGTCGCC...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCGCGGGAACTGCAGTaGCCCGCGCCGCCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGPRELQ*PAPPSK
Trigger: CTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGG...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCGATGCCCAGCCTCTaGGCCGCCAGGTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALSMPSL*AARSSS
Trigger: CGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCGA...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACCTCCAGCGGCCAGATTaGCCGTCGGGGCCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYLQRPD*PSGPPS
Trigger: GCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGAG...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTAGGATCACCCTCTCGTaGTTCTCGATCTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSRITLS*FSILPI
Trigger: GATGGGCAAGATCGAGAACAACGAGAGGGTGATCCT...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACGGCGACGGCTGCAGCTaGTCGCCCGCCGTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYGDGCS*SPAVVK
Trigger: CTTGACCACGGCGGGCGACAAGCTGCAGCCGTCGCC...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTGGCGACGGCTGCAGCTaGTCGCCCGCCGTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGGDGCS*SPAVVK
Trigger: CTTGACCACGGCGGGCGACAAGCTGCAGCCGTCGCC...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAACCGCGGGAACTGCAGTaGCCCGCGCCGCCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SVSYISTGYHQGCACALKPRELQ*PAPPSK
Trigger: CTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGG...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTTCGATGCCCAGCCTCTaGGCCGCCAGGTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLSMPSL*AARSSS
Trigger: CGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCGA...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAACTCCAGCGGCCAGATTaGCCGTCGGGGCCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: SVSYISTGYHQGCACALKLQRPD*PSGPPS
Trigger: GCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGAG...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GTATGTCTGGATAAATACATTGCTGTACAACATCTCCAACATGCAGGTCATGCTCTCCAGCGGCCAGATTaGCCGTCGGGGCCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: VCLDKYIAVQHLQHAGHALQRPD*PSGPPS
Trigger: GCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGAG...AGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGAC +
Preference number: 5 (lower is better)
Translates to: DARISSKCNLVTSGHIQQRSGLG*RVTSND
Trigger: GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCT...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS CCA 90 bp CGCCATCCGAAGCACAGGGCTCAGGAAAGAGTGGGTGGGTGGGTCTaGAGAAGCTATGTGTACCAACCAGGTTCACATATTTTTCTTCCG +
Preference number: 5 (lower is better)
Translates to: RHPKHRAQERVGGWV*RSYVYQPGSHIFLP
Trigger: CGGAAGAAAAATATGTGAACCTGGTTGGTACACATAGCTTCTCCAGACCCACCCACCCACTCTTTCCTGAGCCCTGTGCTTCGGATGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTTCGTTGTTCTCGATCTaGCCCATCTCTGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSSLFSI*PISVTQ
Trigger: CTGAGTCACAGAGATGGGCAAGATCGAGAACAACGA...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCGGGTGCCCCCGACATaGAGGATCACCCTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSRVPPT*RITLSL
Trigger: CAACGAGAGGGTGATCCTCAATGTCGGGGGCACCCG...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATGGCGACGGCTGCAGCTaGTCGCCCGCCGTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: CACALKCSQKVHDTGIYNGDGCS*SPAVVK
Trigger: CTTGACCACGGCGGGCGACAAGCTGCAGCCGTCGCC...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTCGATGCCCAGCCTCTaGGCCGCCAGGTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYSMPSL*AARSSS
Trigger: CGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCGA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCGGTTGTGCATGCGCCTaGAAATGTTCACAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSGCACA*KCSQKV
Trigger: GACCTTTTGTGAACATTTCAAGGCGCATGCACAACC...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCAGTAATGACGAGAGCCTCAGAGCATaGCCTGCCAAGCCCGCTATG +
Preference number: 5 (lower is better)
Translates to: PKSLSKRSGLGLRVTSNDESLRA*PAKPAM
Trigger: CATAGCGGGCTTGGCAGGCAATGCTCTGAGGCTCTC...GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCGGGTGCCCCCGACATaGAGGATCACCCTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSRVPPT*RITLSL
Trigger: CAACGAGAGGGTGATCCTCAATGTCGGGGGCACCCG...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTCGGGTGCCCCCGACATaGAGGATCACCCTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLRVPPT*RITLSL
Trigger: CAACGAGAGGGTGATCCTCAATGTCGGGGGCACCCG...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATTCGATGCCCAGCCTCTaGGCCGCCAGGTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: CACALKCSQKVHDTGIYNSMPSL*AARSSS
Trigger: CGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCGA...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTCGATGCCCAGCCTCTaGGCCGCCAGGTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: EVWALLETSEMLIMNLASSMPSL*AARSSS
Trigger: CGACGAGGACCTGGCGGCCAAGAGGCTGGGCATCGA...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGCTCCAGCGGCCAGATTaGCCGTCGGGGCCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLLQRPD*PSGPPS
Trigger: GCTCGGGGGCCCCGACGGCAAATCTGGCCGCTGGAG...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTACATCTTTAGCAGCTTaGGATGACAGCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSTSLAA*DDSPLS
Trigger: ACTCAGTGGGCTGTCATCCAAAGCTGCTAAAGATGT...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMRSRLS*PRHVSL
Trigger: GAGTGACACATGTCTGGGCAAAGACAATCGACTTCT...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGTGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTG +
Preference number: 5 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQCSRSR*SLPRHV
Trigger: CACATGTCTGGGCAAAGACAATCGACTTCTGGAACA...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGAC +
Preference number: 5 (lower is better)
Translates to: SCFMDTGQSTSRALSWGARSGLG*RVTSND
Trigger: GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCT...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGGGTTGTGCATGCGCCTaGAAATGTTCACAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: SWTLASLQAEHSHGEHQMGCACA*KCSQKV
Trigger: GACCTTTTGTGAACATTTCAAGGCGCATGCACAACC...CATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCTGGTTATCATCAAGGTaGTGCATGCGCCTTGAAATG +
Preference number: 5 (lower is better)
Translates to: LASLQAEHSHGEHQMSSSWLSSR*CMRLEM
Trigger: CATTTCAAGGCGCATGCACAACCTTGATGATAACCA...GCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTCCGGATTCAGGTGGTaGAGCCGCTTCCCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: EVWALLETSEMLIMNLASSGFRW*SRFPGR
Trigger: GCGCCCAGGGAAGCGGCTCAACCACCTGAATCCGGA...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAAAAAGTGGTTCTGCTTaGGTTTCCGAGTGGACGAGG +
Preference number: 5 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAKSGSA*VSEWTR
Trigger: CCTCGTCCACTCGGAAACCAAAGCAGAACCACTTTT...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCATCGTTGTTCTCGATCTaGCCCATCTCTGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: SCFMDTGQSTSRALSWGASLFSI*PISVTQ
Trigger: CTGAGTCACAGAGATGGGCAAGATCGAGAACAACGA...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGGATCACCCTCTCGTaGTTCTCGATCTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGRITLS*FSILPI
Trigger: GATGGGCAAGATCGAGAACAACGAGAGGGTGATCCT...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTACAACACTTGTGCCATaGATGACTGGTTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSTTLVP*MTGSVL
Trigger: CAAGACAGAACCAGTCATCAATGGCACAAGTGTTGT...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAAGGAGAGCTCACCACTaGAAGGTGAAGTCGCCCTGC +
Preference number: 5 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRARRAHH*KVKSPC
Trigger: GCAGGGCGACTTCACCTTCAAGTGGTGAGCTCTCCT...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAACACCATCGCGCAGGGTaGGGCAAACCATGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: SVSYISTGYHQGCACALKHHRAG*GKPWSS
Trigger: CGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGTG...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTAGGATCACCCTCTCGTaGTTCTCGATCTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLRITLS*FSILPI
Trigger: GATGGGCAAGATCGAGAACAACGAGAGGGTGATCCT...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAACATCTTTAGCAGCTTaGGATGACAGCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: SCFMDTGQSTSRALSWGATSLAA*DDSPLS
Trigger: ACTCAGTGGGCTGTCATCCAAAGCTGCTAAAGATGT...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAAAATGGCGGGTGAGCTaGAAAATTCTCAGGATCCTC +
Preference number: 5 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAKWRVS*KILRIL
Trigger: GAGGATCCTGAGAATTTTCAAGCTCACCCGCCATTT...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAGCACTGGCATGGCTATaGTCAGCACTCCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAALAWL*SALQPE
Trigger: CTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGC...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTGCACTGGCATGGCTATaGTCAGCACTCCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSALAWL*SALQPE
Trigger: CTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGC...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCAAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SCFMDTGQSTSRALSWGARSRLS*PRHVSL
Trigger: GAGTGACACATGTCTGGGCAAAGACAATCGACTTCT...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGAC +
Preference number: 5 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGRSGLG*RVTSND
Trigger: GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCT...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp CTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGCCGCAGTTCTACTTTCTCTCATGTTTaGTGCCTTCCCCAAGTCATT +
Preference number: 5 (lower is better)
Translates to: LQAEHSHGEHQMSSSRSSTFSHV*CLPQVI
Trigger: AATGACTTGGGGAAGGCACAAAACATGAGAGAAAGT...AGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
CDS-3UTR CAA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCATTCCATCTGCAGATTTaGTTTCTCCCCCAAATCAGC +
Preference number: 5 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAFHLQI*FLPQIS
Trigger: GCTGATTTGGGGGAGAAACAAAATCTGCAGATGGAA...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCCCGACGAGAAACTACTaGTTGGCGTTTTCCGGATTC +
Preference number: 5 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGPTRNY*LAFSGF
Trigger: GAATCCGGAAAACGCCAACAAGTAGTTTCTCGTCGG...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTAGGATCACCCTCTCGTaGTTCTCGATCTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSRITLS*FSILPI
Trigger: GATGGGCAAGATCGAGAACAACGAGAGGGTGATCCT...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTCGGGTGCCCCCGACATaGAGGATCACCCTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: VWALLETSEMLIMNLASFRVPPT*RITLSL
Trigger: CAACGAGAGGGTGATCCTCAATGTCGGGGGCACCCG...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGRSRLS*PRHVSL
Trigger: GAGTGACACATGTCTGGGCAAAGACAATCGACTTCT...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCACCAGATGAGTTCCAGACCCATGCACACATGTaGGTATTTACAGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: TGQSTSRALSWGAPDEFQTHAHM*VFTVVS
Trigger: TGAAACAACTGTAAATACCAACATGTGTGCATGGGT...CTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGGGTTGTGCATGCGCCTaGAAATGTTCACAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGGCACA*KCSQKV
Trigger: GACCTTTTGTGAACATTTCAAGGCGCATGCACAACC...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGAGCATGGTTATCATCAAGGTaGTGCATGCGCCTTGAAATG +
Preference number: 5 (lower is better)
Translates to: SCFMDTGQSTSRALSWGAWLSSR*CMRLEM
Trigger: CATTTCAAGGCGCATGCACAACCTTGATGATAACCA...TGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 90 bp AAGGAGAGTTGTAGGGTGATGTTACTGGAGAGAGCCTCAGAGCATTaGCTGCCAAGCCCGCTATGTTGTTTAAGCTTCGGGATTTTTCAT +
Preference number: 5 (lower is better)
Translates to: KESCRVMLLERASEH*LPSPLCCLSFGIFH
Trigger: ATGAAAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGGCTCTCTCCAGTAACATCACCCTACAACTCTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540018.5
ENST00000549446.6
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGCACCATCGCGCAGGGTaGGGCAAACCATGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLHHRAG*GKPWSS
Trigger: CGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGTG...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TGCTTCATGGAGACAGATGGCATATACAGGAAAGACAGGGAGCTAAGACAGACACCGACGAGAAACTACTaGTTGGCGTTTTCCGGATTC +
Preference number: 5 (lower is better)
Translates to: CFMETDGIYRKDRELRQTPTRNY*LAFSGF
Trigger: GAATCCGGAAAACGCCAACAAGTAGTTTCTCGTCGG...TGTCTGTCTTAGCTCCCTGTCTTTCCTGTATATGCCATCTGTCTCCATGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCCGACGAGAAACTACTaGTTGGCGTTTTCCGGATTC +
Preference number: 5 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSPTRNY*LAFSGF
Trigger: GAATCCGGAAAACGCCAACAAGTAGTTTCTCGTCGG...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCGTTGTTCTCGATCTaGCCCATCTCTGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALSLFSI*PISVTQ
Trigger: CTGAGTCACAGAGATGGGCAAGATCGAGAACAACGA...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAAGGATCACCCTCTCGTaGTTCTCGATCTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRARITLS*FSILPI
Trigger: GATGGGCAAGATCGAGAACAACGAGAGGGTGATCCT...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGCGGGTGCCCCCGACATaGAGGATCACCCTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLRVPPT*RITLSL
Trigger: CAACGAGAGGGTGATCCTCAATGTCGGGGGCACCCG...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTGCACTGGCATGGCTATaGTCAGCACTCCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCALAWL*SALQPE
Trigger: CTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGC...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGTCACTCTGTGTACTATaGCAGGCCATATTTAATTCT +
Preference number: 5 (lower is better)
Translates to: DARISSKCNLVTSGHIQQSLCVL*QAIFNS
Trigger: AGAATTAAATATGGCCTGCAATAGTACACAGAGTGA...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLRSRLS*PRHVSL
Trigger: GAGTGACACATGTCTGGGCAAAGACAATCGACTTCT...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp CGATGCAAGTACACATATCCTGAGCTATCCACAGTCCCCGAACTCTGCAACATTTCCCCTCTTCTGTTTTaGTCTCTGGTACTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: RCKYTYPELSTVPELCNISPLLF*SLVLER
Trigger: ACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGA...AATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAGGATATGTGTACTTGCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGAC +
Preference number: 5 (lower is better)
Translates to: GYHQGCACALKCSQKVHDRSGLG*RVTSND
Trigger: GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCT...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCAAATGGCCAAGACTGTaGACCCATGCACACATGTTG +
Preference number: 5 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGKWPRL*THAHML
Trigger: CAACATGTGTGCATGGGTCAACAGTCTTGGCCATTT...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGGAAACTTCAGAGATGTaGATCATGAATTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: DARISSKCNLVTSGHIQQETSEM*IMNLAS
Trigger: AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTC...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp GACGCGAGGATCTCTTCCAAGTGCAACCTGGTCACATCAGGGCACATTCAGCAGTTATCCCCAGCTCATTaGCCTTTTATTCTTCATTTC +
Preference number: 5 (lower is better)
Translates to: DARISSKCNLVTSGHIQQLSPAH*PFILHF
Trigger: GAAATGAAGAATAAAAGGCAAATGAGCTGGGGATAA...CTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TTATCCCTCTATTTATATTACGGTCTTTTTCTTCCCTCACATGCTCAATACATGCACCATCGCGCAGGGTaGGGCAAACCATGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: LSLYLYYGLFLPSHAQYMHHRAG*GKPWSS
Trigger: CGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGTG...CATGTATTGAGCATGTGAGGGAAGAAAAAGACCGTAATATAAATAGAGGGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACAAAAGTGGTTCTGCTTaGGTTTCCGAGTGGACGAGG +
Preference number: 5 (lower is better)
Translates to: TGYHQGCACALKCSQKVHKSGSA*VSEWTR
Trigger: CCTCGTCCACTCGGAAACCAAAGCAGAACCACTTTT...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACTCGTTGTTCTCGATCTaGCCCATCTCTGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: TGYHQGCACALKCSQKVHSLFSI*PISVTQ
Trigger: CTGAGTCACAGAGATGGGCAAGATCGAGAACAACGA...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CTGGTCACATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTACAACACTTGTGCCATaGATGACTGGTTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: LVTSGHIQQQKSVSSIVLTTLVP*MTGSVL
Trigger: CAAGACAGAACCAGTCATCAATGGCACAAGTGTTGT...AAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTACATCTTTAGCAGCTTaGGATGACAGCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSTSLAA*DDSPLS
Trigger: ACTCAGTGGGCTGTCATCCAAAGCTGCTAAAGATGT...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCAAATGGCGGGTGAGCTaGAAAATTCTCAGGATCCTC +
Preference number: 5 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALKWRVS*KILRIL
Trigger: GAGGATCCTGAGAATTTTCAAGCTCACCCGCCATTT...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATATCAGCAGGATGGTTCGATGCAAGTACACATATCCTGAGCTATCCACAGTCTGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTG +
Preference number: 5 (lower is better)
Translates to: HISRMVRCKYTYPELSTVCSRSR*SLPRHV
Trigger: CACATGTCTGGGCAAAGACAATCGACTTCTGGAACA...GACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp AGGTCATGCTCTAGGACTTGGGGATATAGAGTAATACATGTTTCGTGGCCAATAAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGAC +
Preference number: 5 (lower is better)
Translates to: RSCSRTWGYRVIHVSWPIRSGLG*RVTSND
Trigger: GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCT...TATTGGCCACGAAACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGACTTTCTCTCATGTTTaGTGCCTTCCCCAAGTCATT +
Preference number: 5 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGTFSHV*CLPQVI
Trigger: AATGACTTGGGGAAGGCACAAAACATGAGAGAAAGT...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
CDS GCA 90 bp CTGATGGGGAGCCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTTA +
Preference number: 5 (lower is better)
Translates to: LMGSLICYVPEVDCL*PDMCHSVYYCRPYL
Trigger: TAAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGCTCCCCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548243.1
CDS-3UTR CAA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACACGAGAAACTACTTGTaGGCGTTTTCCGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: TGYHQGCACALKCSQKVHTRNYL*AFSGFR
Trigger: CCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCGT...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTACGAGAAACTACTTGTaGGCGTTTTCCGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLTRNYL*AFSGFR
Trigger: CCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCGT...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTACAACACTTGTGCCATaGATGACTGGTTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSTTLVP*MTGSVL
Trigger: CAAGACAGAACCAGTCATCAATGGCACAAGTGTTGT...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTACATCTTTAGCAGCTTaGGATGACAGCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLTSLAA*DDSPLS
Trigger: ACTCAGTGGGCTGTCATCCAAAGCTGCTAAAGATGT...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTAAATGGCGGGTGAGCTaGAAAATTCTCAGGATCCTC +
Preference number: 5 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLKWRVS*KILRIL
Trigger: GAGGATCCTGAGAATTTTCAAGCTCACCCGCCATTT...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATAAATGGCGGGTGAGCTaGAAAATTCTCAGGATCCTC +
Preference number: 5 (lower is better)
Translates to: GYHQGCACALKCSQKVHDKWRVS*KILRIL
Trigger: GAGGATCCTGAGAATTTTCAAGCTCACCCGCCATTT...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTG +
Preference number: 5 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRACSRSR*SLPRHV
Trigger: CACATGTCTGGGCAAAGACAATCGACTTCTGGAACA...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACTGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTG +
Preference number: 5 (lower is better)
Translates to: TGYHQGCACALKCSQKVHCSRSR*SLPRHV
Trigger: CACATGTCTGGGCAAAGACAATCGACTTCTGGAACA...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTTCCCCTCTTCTGTTTTaGTCTCTGGTACTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSSPLLF*SLVLER
Trigger: ACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGA...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAAAATGGCCAAGACTGTaGACCCATGCACACATGTTG +
Preference number: 5 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRAKWPRL*THAHML
Trigger: CAACATGTGTGCATGGGTCAACAGTCTTGGCCATTT...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGGTTGTGCATGCGCCTaGAAATGTTCACAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: TGYHQGCACALKCSQKVHGCACA*KCSQKV
Trigger: GACCTTTTGTGAACATTTCAAGGCGCATGCACAACC...GTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTGGTTGTGCATGCGCCTaGAAATGTTCACAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLGCACA*KCSQKV
Trigger: GACCTTTTGTGAACATTTCAAGGCGCATGCACAACC...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTGGTTATCATCAAGGTaGTGCATGCGCCTTGAAATG +
Preference number: 5 (lower is better)
Translates to: VGIYSCFMDTGQSTSRALWLSSR*CMRLEM
Trigger: CATTTCAAGGCGCATGCACAACCTTGATGATAACCA...GAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATATCAGCAGGATGGTTCGATGCAAGTACACATATCCTGAGCTATCCACAGTCTGGTTATCATCAAGGTaGTGCATGCGCCTTGAAATG +
Preference number: 5 (lower is better)
Translates to: HISRMVRCKYTYPELSTVWLSSR*CMRLEM
Trigger: CATTTCAAGGCGCATGCACAACCTTGATGATAACCA...GACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp GGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATGTTCCAATGAAGTGGTaGGCATTTGGAAGCACACTG +
Preference number: 5 (lower is better)
Translates to: GYHQGCACALKCSQKVHDVPMKW*AFGSTL
Trigger: CAGTGTGCTTCCAAATGCCAACCACTTCATTGGAAC...ATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCCTTTCTCTCATGTTTaGTGCCTTCCCCAAGTCATT +
Preference number: 5 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSPFSHV*CLPQVI
Trigger: AATGACTTGGGGAAGGCACAAAACATGAGAGAAAGG...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp ATCAGGGCACATTCAGCAGCAGAAGTCTGTTTCCAGTATAGTCCTTGGTATGGCAAAGACACAAGAGCTTaGGGTGATATTTGGCACTCT +
Preference number: 5 (lower is better)
Translates to: IRAHSAAEVCFQYSPWYGKDTRA*GDIWHS
Trigger: AGAGTGCCAAATATCACCCAAAGCTCTTGTGTCTTT...GCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS TCA 90 bp CAGGCCATATTTAATTCTGTCTTGCAAAAAGTAGGTGAGCTTGCCTaGGGAGCAGGAGGGATGTGCTTCTTTCTTTTCCTTGGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: QAIFNSVLQKVGELA*GAGGMCFFLFLGSF
Trigger: GAAACTTCCAAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAATATGGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548243.1
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATTCGTTGTTCTCGATCTaGCCCATCTCTGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: CACALKCSQKVHDTGIYNSLFSI*PISVTQ
Trigger: CTGAGTCACAGAGATGGGCAAGATCGAGAACAACGA...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAACAACACTTGTGCCATaGATGACTGGTTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRATTLVP*MTGSVL
Trigger: CAAGACAGAACCAGTCATCAATGGCACAAGTGTTGT...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATACATCTTTAGCAGCTTaGGATGACAGCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: YISITALSNSQHNLMWAHTSLAA*DDSPLS
Trigger: ACTCAGTGGGCTGTCATCCAAAGCTGCTAAAGATGT...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTAAATGGCGGGTGAGCTaGAAAATTCTCAGGATCCTC +
Preference number: 5 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGKWRVS*KILRIL
Trigger: GAGGATCCTGAGAATTTTCAAGCTCACCCGCCATTT...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGGTCATGCTCTAGGACTTGGGGATATAGAGTAATACATGTTTCGTGGCCAATAAAATGGCGGGTGAGCTaGAAAATTCTCAGGATCCTC +
Preference number: 5 (lower is better)
Translates to: RSCSRTWGYRVIHVSWPIKWRVS*KILRIL
Trigger: GAGGATCCTGAGAATTTTCAAGCTCACCCGCCATTT...TATTGGCCACGAAACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTTGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTG +
Preference number: 5 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGCSRSR*SLPRHV
Trigger: CACATGTCTGGGCAAAGACAATCGACTTCTGGAACA...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATTCCCCTCTTCTGTTTTaGTCTCTGGTACTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: YISITALSNSQHNLMWAHSPLLF*SLVLER
Trigger: ACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGA...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAAATGGCCAAGACTGTaGACCCATGCACACATGTTG +
Preference number: 5 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYKWPRL*THAHML
Trigger: CAACATGTGTGCATGGGTCAACAGTCTTGGCCATTT...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCATGGGGGAAACTTCAGAGATGTaGATCATGAATTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LQLFHGHWPVYKQSTLMGETSEM*IMNLAS
Trigger: AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTC...CCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTTGGTTATCATCAAGGTaGTGCATGCGCCTTGAAATG +
Preference number: 5 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLWLSSR*CMRLEM
Trigger: CATTTCAAGGCGCATGCACAACCTTGATGATAACCA...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTT +
Preference number: 5 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYAKPAM*FKLRDF
Trigger: AAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGC...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTTTCCATCTGCAGATTTaGTTTCTCCCCCAAATCAGC +
Preference number: 5 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGFHLQI*FLPQIS
Trigger: GCTGATTTGGGGGAGAAACAAAATCTGCAGATGGAA...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTACGAGAAACTACTTGTaGGCGTTTTCCGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: EVWALLETSEMLIMNLASTRNYL*AFSGFR
Trigger: CCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCGT...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTAAAAGTGGTTCTGCTTaGGTTTCCGAGTGGACGAGG +
Preference number: 5 (lower is better)
Translates to: VWALLETSEMLIMNLASFKSGSA*VSEWTR
Trigger: CCTCGTCCACTCGGAAACCAAAGCAGAACCACTTTT...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAATGTGGGCCCATACAACACTTGTGCCATaGATGACTGGTTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: YISITALSNSQHNLMWAHTTLVP*MTGSVL
Trigger: CAAGACAGAACCAGTCATCAATGGCACAAGTGTTGT...ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTCCAATGGGAATGTTTTaGAACTGTGTGTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSPMGMF*NCVCSL
Trigger: TAGTGAGCACACACAGTTCAAAAACATTCCCATTGG...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: EVWALLETSEMLIMNLASRSRLS*PRHVSL
Trigger: GAGTGACACATGTCTGGGCAAAGACAATCGACTTCT...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAAAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SVSYISTGYHQGCACALKRSRLS*PRHVSL
Trigger: GAGTGACACATGTCTGGGCAAAGACAATCGACTTCT...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATTCCCCTCTTCTGTTTTaGTCTCTGGTACTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: CACALKCSQKVHDTGIYNSPLLF*SLVLER
Trigger: ACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGA...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATCCCCTCTTCTGTTTTaGTCTCTGGTACTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: SVSYISTGYHQGCACALKSPLLF*SLVLER
Trigger: ACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGA...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATGGTTGTGCATGCGCCTaGAAATGTTCACAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: CACALKCSQKVHDTGIYNGCACA*KCSQKV
Trigger: GACCTTTTGTGAACATTTCAAGGCGCATGCACAACC...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATATCAGCAGGATGGTTCGATGCAAGTACACATATCCTGAGCTATCCACAGTCTCCCTAAGGATTTTGTaGGAGTGTAGTAATGAATGC +
Preference number: 5 (lower is better)
Translates to: HISRMVRCKYTYPELSTVSLRIL*ECSNEC
Trigger: GCATTCATTACTACACTCCAACAAAATCCTTAGGGA...GACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp CATATCAGCAGGATGGTTCGATGCAAGTACACATATCCTGAGCTATCCACAGTCGTCTGGATAAATACATaGCTGTACAACATCTCCAAC +
Preference number: 5 (lower is better)
Translates to: HISRMVRCKYTYPELSTVVWINT*LYNISN
Trigger: GTTGGAGATGTTGTACAGCAATGTATTTATCCAGAC...GACTGTGGATAGCTCAGGATATGTGTACTTGCATCGAACCATCCTGCTGATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS GCA 90 bp CACCTGATAACACTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTTA +
Preference number: 5 (lower is better)
Translates to: HLITLICYVPEVDCL*PDMCHSVYYCRPYL
Trigger: TAAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000393288.2
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
CDS GCA 90 bp GCAGAGGTAAAACTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTTA +
Preference number: 5 (lower is better)
Translates to: AEVKLICYVPEVDCL*PDMCHSVYYCRPYL
Trigger: TAAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTTTTACCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS-3UTR CAA 90 bp TCAGTTAGTTACATTTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATTCCATCTGCAGATTTaGTTTCTCCCCCAAATCAGC +
Preference number: 5 (lower is better)
Translates to: SVSYISTGYHQGCACALKFHLQI*FLPQIS
Trigger: GCTGATTTGGGGGAGAAACAAAATCTGCAGATGGAA...TTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGCCGACGAGAAACTACTaGTTGGCGTTTTCCGGATTC +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLPTRNY*LAFSGF
Trigger: GAATCCGGAAAACGCCAACAAGTAGTTTCTCGTCGG...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGTCGTTGTTCTCGATCTaGCCCATCTCTGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLSLFSI*PISVTQ
Trigger: CTGAGTCACAGAGATGGGCAAGATCGAGAACAACGA...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAAGGATCACCCTCTCGTaGTTCTCGATCTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: TKLYYISITALSNSQHNLRITLS*FSILPI
Trigger: GATGGGCAAGATCGAGAACAACGAGAGGGTGATCCT...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACCCAATGGGAATGTTTTaGAACTGTGTGTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYPMGMF*NCVCSL
Trigger: TAGTGAGCACACACAGTTCAAAAACATTCCCATTGG...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTCTTTACATTCCAAAATTATaGACAATGACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: SRSSFISFKCLMKTRGSLYIPKL*TMTGTG
Trigger: GCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTA...AAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCACTCTTACATTCCAAAATTATaGACAATGACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: LVFTVVSWTLASLQAEHSYIPKL*TMTGTG
Trigger: GCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTA...AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTTCACTCTGTGTACTATaGCAGGCCATATTTAATTCT +
Preference number: 5 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSSLCVL*QAIFNS
Trigger: AGAATTAAATATGGCCTGCAATAGTACACAGAGTGA...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCAACCCATGCACACATGTaGGTATTTACAGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRATHAHM*VFTVVS
Trigger: TGAAACAACTGTAAATACCAACATGTGTGCATGGGT...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TCCAGCCGCAGTTCTTTTATAAGCTTTAAGTGCCTCATGAAGACGCGAGGATCTTTATCCCCAGCTCATTaGCCTTTTATTCTTCATTTC +
Preference number: 5 (lower is better)
Translates to: SSRSSFISFKCLMKTRGSLSPAH*PFILHF
Trigger: GAAATGAAGAATAAAAGGCAAATGAGCTGGGGATAA...AGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 90 bp CTTTGCAGTTATCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTTA +
Preference number: 5 (lower is better)
Translates to: LCSYLICYVPEVDCL*PDMCHSVYYCRPYL
Trigger: TAAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGATAACTGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350228.6
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGACGAGAAACTACTTGTaGGCGTTTTCCGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLTRNYL*AFSGFR
Trigger: CCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCGT...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATCCAATGGGAATGTTTTaGAACTGTGTGTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: CACALKCSQKVHDTGIYNPMGMF*NCVCSL
Trigger: TAGTGAGCACACACAGTTCAAAAACATTCCCATTGG...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp CCCATGAAGAGTAATTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTCCAATGGGAATGTTTTaGAACTGTGTGTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: PMKSNSKKCGPYLKLQRCPMGMF*NCVCSL
Trigger: TAGTGAGCACACACAGTTCAAAAACATTCCCATTGG...ACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCCACTGGTTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTACCCATGCACACATGTaGGTATTTACAGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: FHWLSSRLCMRLEMFTKGTHAHM*VFTVVS
Trigger: TGAAACAACTGTAAATACCAACATGTGTGCATGGGT...ACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AGGTCATGCTCTAGGACTTGGGGATATAGAGTAATACATGTTTCGTGGCCAATAACCCATGCACACATGTaGGTATTTACAGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: RSCSRTWGYRVIHVSWPITHAHM*VFTVVS
Trigger: TGAAACAACTGTAAATACCAACATGTGTGCATGGGT...TATTGGCCACGAAACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp CATGTTGGTATTTACAGTTGTTTCATGGACACTGGCCAGTCTACAAGCAGAGCATTATCCCCAGCTCATTaGCCTTTTATTCTTCATTTC +
Preference number: 5 (lower is better)
Translates to: HVGIYSCFMDTGQSTSRALSPAH*PFILHF
Trigger: GAAATGAAGAATAAAAGGCAAATGAGCTGGGGATAA...TGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGCCGAACTCTGCAACATaGCTTTCAGGTGATAGAGAC +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLPNSAT*LSGDRD
Trigger: GTCTCTATCACCTGAAAGCAATGTTGCAGAGTTCGG...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATGGTATGGAGTCGGGTTaGGAGGGAGTAAATATTAAA +
Preference number: 5 (lower is better)
Translates to: CACALKCSQKVHDTGIYNGMESG*EGVNIK
Trigger: TTTAATATTTACTCCCTCCAAACCCGACTCCATACC...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp AGGTCATGCTCTAGGACTTGGGGATATAGAGTAATACATGTTTCGTGGCCAATAGACTCCCTAAGGATTTaGTTGGAGTGTAGTAATGAA +
Preference number: 5 (lower is better)
Translates to: RSCSRTWGYRVIHVSWPIDSLRI*LECSNE
Trigger: TTCATTACTACACTCCAACAAAATCCTTAGGGAGTC...TATTGGCCACGAAACATGTATTACTCTATATCCCCAAGTCCTAGAGCATGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGTTCCATCTGCAGATTTaGTTTCTCCCCCAAATCAGC +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLFHLQI*FLPQIS
Trigger: GCTGATTTGGGGGAGAAACAAAATCTGCAGATGGAA...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGACAACACTTGTGCCATaGATGACTGGTTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLTTLVP*MTGSVL
Trigger: CAAGACAGAACCAGTCATCAATGGCACAAGTGTTGT...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAACATCTTTAGCAGCTTaGGATGACAGCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: TKLYYISITALSNSQHNLTSLAA*DDSPLS
Trigger: ACTCAGTGGGCTGTCATCCAAAGCTGCTAAAGATGT...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTCCAATGGGAATGTTTTaGAACTGTGTGTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: VWALLETSEMLIMNLASFPMGMF*NCVCSL
Trigger: TAGTGAGCACACACAGTTCAAAAACATTCCCATTGG...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACAGGGATTTATAATTACATTCCAAAATTATaGACAATGACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: CACALKCSQKVHDTGIYNYIPKL*TMTGTG
Trigger: GCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTA...ATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACTCACTCTGTGTACTATaGCAGGCCATATTTAATTCT +
Preference number: 5 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYSLCVL*QAIFNS
Trigger: AGAATTAAATATGGCCTGCAATAGTACACAGAGTGA...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTG +
Preference number: 5 (lower is better)
Translates to: TKLYYISITALSNSQHNLCSRSR*SLPRHV
Trigger: CACATGTCTGGGCAAAGACAATCGACTTCTGGAACA...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTATCATCAAGGTTGTGCATGCGCCTTGAAATGTTCACAAAAGGTCCACGATACGAAACTTCAGAGATGTaGATCATGAATTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LSSRLCMRLEMFTKGPRYETSEM*IMNLAS
Trigger: AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTC...GTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTGTAATGACAACCTCTTaGCAGTTATCTGTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: EVWALLETSEMLIMNLASVMTTS*QLSVCK
Trigger: TTTGCACACAGATAACTGCAAAGAGGTTGTCATTAC...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGCCTTTCTCTCATGTTTaGTGCCTTCCCCAAGTCATT +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLPFSHV*CLPQVI
Trigger: AATGACTTGGGGAAGGCACAAAACATGAGAGAAAGG...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp GAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTGTCTGGATAAATACATaGCTGTACAACATCTCCAAC +
Preference number: 5 (lower is better)
Translates to: EVWALLETSEMLIMNLASVWINT*LYNISN
Trigger: GTTGGAGATGTTGTACAGCAATGTATTTATCCAGAC...AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS-3UTR CAA 90 bp GTATGTCTGGATAAATACATTGCTGTACAACATCTCCAACATGCAGGTCATGCTTTGGAGTTTAGGCCTTaGAAATGTAAGCATCCATTC +
Preference number: 5 (lower is better)
Translates to: VCLDKYIAVQHLQHAGHALEFRP*KCKHPF
Trigger: GAATGGATGCTTACATTTCAAAGGCCTAAACTCCAA...AGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS TCA 90 bp CCTTTGAAATGTAAGCATCCATTCTTCTTAAATAACTGCTTCTTGTaGATTAGGTTGAGATGCATGGCACCATGTGGCAGAGGTAAAACT +
Preference number: 5 (lower is better)
Translates to: PLKCKHPFFLNNCFL*IRLRCMAPCGRGKT
Trigger: AGTTTTACCTCTGCCACATGGTGCCATGCATCTCAACCTAATTCACAAGAAGCAGTTATTTAAGAAGAATGGATGCTTACATTTCAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS GCA 90 bp ATTTTTCATATCCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTTA +
Preference number: 5 (lower is better)
Translates to: IFHILICYVPEVDCL*PDMCHSVYYCRPYL
Trigger: TAAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGATATGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540018.5
CDS-3UTR CAA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTTACATTCCAAAATTATaGACAATGACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: VWALLETSEMLIMNLASFYIPKL*TMTGTG
Trigger: GCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTA...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp AAAGCCTGGGTAAGATTCATTAGCTACCCAAGTGGCATTTCTGACTTCAAATTGGAAACTTCAGAGATGTaGATCATGAATTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KAWVRFISYPSGISDFKLETSEM*IMNLAS
Trigger: AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTC...CAATTTGAAGTCAGAAATGCCACTTGGGTAGCTAATGAATCTTACCCAGGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS-3UTR CAA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTACCAATGGGAATGTTTTaGAACTGTGTGTGCTCACTA +
Preference number: 5 (lower is better)
Translates to: TKLYYISITALSNSQHNLPMGMF*NCVCSL
Trigger: TAGTGAGCACACACAGTTCAAAAACATTCCCATTGG...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp TTCAAAGAAGTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGTACATTCCAAAATTATaGACAATGACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: FKEVWALLETSEMLIMNLYIPKL*TMTGTG
Trigger: GCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTA...CAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTTCACTCTGTGTACTATaGCAGGCCATATTTAATTCT +
Preference number: 5 (lower is better)
Translates to: VWALLETSEMLIMNLASFSLCVL*QAIFNS
Trigger: AGAATTAAATATGGCCTGCAATAGTACACAGAGTGA...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAACTTTCTCTCATGTTTaGTGCCTTCCCCAAGTCATT +
Preference number: 5 (lower is better)
Translates to: TKLYYISITALSNSQHNLTFSHV*CLPQVI
Trigger: AATGACTTGGGGAAGGCACAAAACATGAGAGAAAGT...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
CDS-3UTR CAA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTGAAACTTCAGAGATGTaGATCATGAATTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: VWALLETSEMLIMNLASFETSEM*IMNLAS
Trigger: AGAAGCCAAATTCATGATCAACATCTCTGAAGTTTC...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp GTGTGGGCCTTACTTGAAACTTCAGAGATGTTGATCATGAATTTGGCTTCTTTTGTAATGACAACCTCTTaGCAGTTATCTGATCTGTTA +
Preference number: 5 (lower is better)
Translates to: VWALLETSEMLIMNLASFVMTTS*QLSDLL
Trigger: TAACAGATCAGATAACTGCAAAGAGGTTGTCATTAC...AAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350228.6
CDS-3UTR CAA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTAACCCATGCACACATGTaGGTATTTACAGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: TKLYYISITALSNSQHNLTHAHM*VFTVVS
Trigger: TGAAACAACTGTAAATACCAACATGTGTGCATGGGT...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS-3UTR CAA 90 bp ACAAAACTATACTACATCAGTATCACTGCCTTAAGTAATTCACAGCACAACCTATCACTCTGTGTACTATaGCAGGCCATATTTAATTCT +
Preference number: 5 (lower is better)
Translates to: TKLYYISITALSNSQHNLSLCVL*QAIFNS
Trigger: AGAATTAAATATGGCCTGCAATAGTACACAGAGTGA...TAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS CAA 90 bp CCGCCACCGGGATGGTCGCTGGCCCTGCCGCCGCGGGAACTGCAGTaGCCCGCGCCGCCCTCGAAGCAGCCGCCTGGCCCGGGGGACAGC +
Preference number: 6 (lower is better)
Translates to: PPPGWSLALPPRELQ*PAPPSKQPPGPGDS
Trigger: GCTGTCCCCCGGGCCAGGCGGCTGCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTGGCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 72 bp GATGGTCGCTGGCCCTGCCGCCGCGGGAACTGCAGTTaGCCGCGCCGCCCTCGAAGCAGCCGCCTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: DGRWPCRRGNCS*PRRPRSSRLAR
Trigger: CCGGGCCAGGCGGCTGCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS CAA 72 bp GGATGGTCGCTGGCCCTGCCGCCGCGGGAACTGCAGTaGCCCGCGCCGCCCTCGAAGCAGCCGCCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: GWSLALPPRELQ*PAPPSKQPPGP
Trigger: CGGGCCAGGCGGCTGCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 72 bp CACCGGGATGGTCGCTGGCCCTGCCGCCGCGGGAACTaGAGTTGCCCGCGCCGCCCTCGAAGCAGCCGCCTG +
Preference number: 6 (lower is better)
Translates to: HRDGRWPCRRGN*SCPRRPRSSRL
Trigger: CAGGCGGCTGCTTCGAGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 72 bp AGAACTCGCGGCCGCCACCGGGATGGTCGCTGGCCCTaGCGCCGCGGGAACTGCAGTTGCCCGCGCCGCCCT +
Preference number: 6 (lower is better)
Translates to: RTRGRHRDGRWP*RRGNCSCPRRP
Trigger: AGGGCGGCGCGGGCAACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTGGCGGCCGCGAGTTCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 72 bp GCAAACCATGGAGCTCGGGGCGGGTCCAGCCGGCACTaGCCGACCCCTCCGGGAGCGGGCAGATCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: ANHGARGGSSRH*PTPPGAGRSAG
Trigger: GCCAGCCGATCTGCCCGCTCCCGGAGGGGTCGGGCAGTGCCGGCTGGACCCGCCCCGAGCTCCATGGTTTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CCA 72 bp TCCGGATTCAGGTGGTTGAGCCGCTTCCCTGGGCGCTaGGGTGGGGGAGAAAGCCCCCGCCGGCCGCCGGCC +
Preference number: 6 (lower is better)
Translates to: SGFRWLSRFPGR*GGGESPRRPPA
Trigger: GGCCGGCGGCCGGCGGGGGCTTTCTCCCCCACCCCAGCGCCCAGGGAAGCGGCTCAACCACCTGAATCCGGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000549446.6
ENST00000647764.1
CDS CCA 72 bp CGAAGAAGAACTCGCGGCCGCCACCGGGATGGTCGCTaGCCCTGCCGCCGCGGGAACTGCAGTTGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: RRRTRGRHRDGR*PCRRGNCSCPR
Trigger: GCGCGGGCAACTGCAGTTCCCGCGGCGGCAGGGCCAGCGACCATCCCGGTGGCGGCCGCGAGTTCTTCTTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS TCA 72 bp CGCCGGCCGCCGGCCGCGCTCCCCGCCTTCATTCTGTaGTCTGCGGATTTGCCAGTCGCCAACCTCCGCGCC +
Preference number: 6 (lower is better)
Translates to: RRPPAALPAFIL*SADLPVANLRA
Trigger: GGCGCGGAGGTTGGCGACTGGCAAATCCGCAGATCACAGAATGAAGGCGGGGAGCGCGGCCGGCGGCCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CCA 72 bp GTGGAGGCGGCGACGGCTGCAGCTTGTCGCCCGCCGTaGTCAAGCAGTCGCCTGGGGGCTCGGAGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: VEAATAAACRPP*SSSRLGARRRQ
Trigger: TTGCCTCCTCCGAGCCCCCAGGCGACTGCTTGACCACGGCGGGCGACAAGCTGCAGCCGTCGCCGCCTCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS TCA 72 bp CCCGACCCCTCCGGGAGCGGGCAGATCGGCTGGCCGTaGATGGAGTGGAGACTGGCCGCAGGTCAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: PDPSGSGQIGWP*MEWRLAAGQES
Trigger: GCTCTCCTGACCTGCGGCCAGTCTCCACTCCATTCACGGCCAGCCGATCTGCCCGCTCCCGGAGGGGTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CCA 72 bp GCCCAGAGTCACCATCGCGCAGGGTTGGGCAAACCATaGAGCTCGGGGCGGGTCCAGCCGGCACTGCCCGAC +
Preference number: 6 (lower is better)
Translates to: AQSHHRAGLGKP*SSGRVQPALPD
Trigger: GTCGGGCAGTGCCGGCTGGACCCGCCCCGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGTGACTCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CCA 72 bp CCAACCTCCGCGCCCAGAGTCACCATCGCGCAGGGTTaGGCAAACCATGGAGCTCGGGGCGGGTCCAGCCGG +
Preference number: 6 (lower is better)
Translates to: PTSAPRVTIAQG*ANHGARGGSSR
Trigger: CCGGCTGGACCCGCCCCGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGTGACTCTGGGCGCGGAGGTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CAA 72 bp GCCAACCTCCGCGCCCAGAGTCACCATCGCGCAGGGTaGGGCAAACCATGGAGCTCGGGGCGGGTCCAGCCG +
Preference number: 6 (lower is better)
Translates to: ANLRAQSHHRAG*GKPWSSGRVQP
Trigger: CGGCTGGACCCGCCCCGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGTGACTCTGGGCGCGGAGGTTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CAA 90 bp TTGCCAGTCGCCAACCTCCGCGCCCAGAGTCACCATCGCGCAGGGTaGGGCAAACCATGGAGCTCGGGGCGGGTCCAGCCGGCACTGCCC +
Preference number: 6 (lower is better)
Translates to: LPVANLRAQSHHRAG*GKPWSSGRVQPALP
Trigger: GGGCAGTGCCGGCTGGACCCGCCCCGAGCTCCATGGTTTGCCCAACCCTGCGCGATGGTGACTCTGGGCGCGGAGGTTGGCGACTGGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS GCA 72 bp GCCGCCGGCCGCGCTCCCCGCCTTCATTCTGTGATCTaGGGATTTGCCAGTCGCCAACCTCCGCGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: AAGRAPRLHSVI*GFASRQPPRPE
Trigger: CTCTGGGCGCGGAGGTTGGCGACTGGCAAATCCGCAGATCACAGAATGAAGGCGGGGAGCGCGGCCGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CCA 72 bp ACCCCTCCGGGAGCGGGCAGATCGGCTGGCCGTGAATaGAGTGGAGACTGGCCGCAGGTCAGGAGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: TPPGAGRSAGRE*SGDWPQVRRAH
Trigger: GTGAGCTCTCCTGACCTGCGGCCAGTCTCCACTCCATTCACGGCCAGCCGATCTGCCCGCTCCCGGAGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS GCA 72 bp CCGCGCTCCCCGCCTTCATTCTGTGATCTGCGGATTTaGCAGTCGCCAACCTCCGCGCCCAGAGTCACCATC +
Preference number: 6 (lower is better)
Translates to: PRSPPSFCDLRI*QSPTSAPRVTI
Trigger: GATGGTGACTCTGGGCGCGGAGGTTGGCGACTGGCAAATCCGCAGATCACAGAATGAAGGCGGGGAGCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CAA 90 bp CTTGGCGCCCAGGTGAGCCGCCCTTCTCCGACGAGAAACTACTTGTaGGCGTTTTCCGGATTCAGGTGGTTGAGCCGCTTCCCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: LGAQVSRPSPTRNYL*AFSGFRWLSRFPGR
Trigger: GCGCCCAGGGAAGCGGCTCAACCACCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCGTCGGAGAAGGGCGGCTCACCTGGGCGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000549446.6
ENST00000647764.1
CDS CCA 72 bp TGGTTCTGCTTTGGTTTCCGAGTGGACGAGGTTCTCTaGGCAGCGGGACTGAGTCTTGGCGCCCAGGTGAGC +
Preference number: 6 (lower is better)
Translates to: WFCFGFRVDEVL*AAGLSLGAQVS
Trigger: GCTCACCTGGGCGCCAAGACTCAGTCCCGCTGCCCAGAGAACCTCGTCCACTCGGAAACCAAAGCAGAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000549446.6
ENST00000647764.1
CDS CAA 90 bp AGTCTTGGCGCCCAGGTGAGCCGCCCTTCTCCGACGAGAAACTACTaGTTGGCGTTTTCCGGATTCAGGTGGTTGAGCCGCTTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: SLGAQVSRPSPTRNY*LAFSGFRWLSRFPG
Trigger: CCCAGGGAAGCGGCTCAACCACCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCGTCGGAGAAGGGCGGCTCACCTGGGCGCCAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000549446.6
ENST00000647764.1
CDS TCA 72 bp TGCTGCGGTAGGTTTCGTGCCGGGTGCCCCCGACATTaGGGATCACCCTCTCGTTGTTCTCGATCTTGCCCA +
Preference number: 6 (lower is better)
Translates to: CCGRFRAGCPRH*GSPSRCSRSCP
Trigger: TGGGCAAGATCGAGAACAACGAGAGGGTGATCCTCAATGTCGGGGGCACCCGGCACGAAACCTACCGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS CAA 72 bp AGTGGAGACTGGCCGCAGGTCAGGAGAGCTCACCACTaGAAGGTGAAGTCGCCCTGCTCGGATTCCATCTGC +
Preference number: 6 (lower is better)
Translates to: SGDWPQVRRAHH*KVKSPCSDSIC
Trigger: GCAGATGGAATCCGAGCAGGGCGACTTCACCTTCAAGTGGTGAGCTCTCCTGACCTGCGGCCAGTCTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CAA 72 bp GCCCAGGTGAGCCGCCCTTCTCCGACGAGAAACTACTaGTTGGCGTTTTCCGGATTCAGGTGGTTGAGCCGC +
Preference number: 6 (lower is better)
Translates to: AQVSRPSPTRNY*LAFSGFRWLSR
Trigger: GCGGCTCAACCACCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCGTCGGAGAAGGGCGGCTCACCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000549446.6
ENST00000647764.1
CDS CAA 72 bp CAGGTGAGCCGCCCTTCTCCGACGAGAAACTACTTGTaGGCGTTTTCCGGATTCAGGTGGTTGAGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: QVSRPSPTRNYL*AFSGFRWLSRF
Trigger: GAAGCGGCTCAACCACCTGAATCCGGAAAACGCCAACAAGTAGTTTCTCGTCGGAGAAGGGCGGCTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000549446.6
ENST00000647764.1
CDS CAA 72 bp TGCCGGGTGCCCCCGACATTGAGGATCACCCTCTCGTaGTTCTCGATCTTGCCCATCTCTGTGACTCAGACA +
Preference number: 6 (lower is better)
Translates to: CRVPPTLRITLS*FSILPISVTQT
Trigger: TGTCTGAGTCACAGAGATGGGCAAGATCGAGAACAACGAGAGGGTGATCCTCAATGTCGGGGGCACCCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS CAA 90 bp CGTGAATGGAGTGGAGACTGGCCGCAGGTCAGGAGAGCTCACCACTaGAAGGTGAAGTCGCCCTGCTCGGATTCCATCTGCAGATTTTGT +
Preference number: 6 (lower is better)
Translates to: REWSGDWPQVRRAHH*KVKSPCSDSICRFC
Trigger: ACAAAATCTGCAGATGGAATCCGAGCAGGGCGACTTCACCTTCAAGTGGTGAGCTCTCCTGACCTGCGGCCAGTCTCCACTCCATTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS TCA 72 bp TCGAGAGCGCCTCAGAGGACAAGGAGAGTTGTAGGGTaGTGTTACTGGAGAGAGCCTCAGAGCATTGCCTGC +
Preference number: 6 (lower is better)
Translates to: SRAPQRTRRVVG*CYWREPQSIAC
Trigger: GCAGGCAATGCTCTGAGGCTCTCTCCAGTAACATCACCCTACAACTCTCCTTGTCCTCTGAGGCGCTCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540018.5
ENST00000549446.6
CDS CAA 90 bp CCACTTGAAGGTGAAGTCGCCCTGCTCGGATTCCATCTGCAGATTTaGTTTCTCCCCCAAATCAGCCACTGCTGGAGCTGTCCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: PLEGEVALLGFHLQI*FLPQISHCWSCPFS
Trigger: GCTGAAGGGACAGCTCCAGCAGTGGCTGATTTGGGGGAGAAACAAAATCTGCAGATGGAATCCGAGCAGGGCGACTTCACCTTCAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS GCA 72 bp GTCAGGAGAGCTCACCACTTGAAGGTGAAGTCGCCCTaGTCGGATTCCATCTGCAGATTTTGTTTCTCCCCC +
Preference number: 6 (lower is better)
Translates to: VRRAHHLKVKSP*SDSICRFCFSP
Trigger: GGGGGAGAAACAAAATCTGCAGATGGAATCCGAGCAGGGCGACTTCACCTTCAAGTGGTGAGCTCTCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CCA 72 bp CTGCAGATTTTGTTTCTCCCCCAAATCAGCCACTGCTaGAGCTGTCCCTTCAGCACCACTCGCCATCAACCT +
Preference number: 6 (lower is better)
Translates to: LQILFLPQISHC*SCPFSTTRHQP
Trigger: AGGTTGATGGCGAGTGGTGCTGAAGGGACAGCTCCAGCAGTGGCTGATTTGGGGGAGAAACAAAATCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS CAA 72 bp GGTGAAGTCGCCCTGCTCGGATTCCATCTGCAGATTTaGTTTCTCCCCCAAATCAGCCACTGCTGGAGCTGT +
Preference number: 6 (lower is better)
Translates to: GEVALLGFHLQI*FLPQISHCWSC
Trigger: ACAGCTCCAGCAGTGGCTGATTTGGGGGAGAAACAAAATCTGCAGATGGAATCCGAGCAGGGCGACTTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000549446.6
ENST00000647764.1
CDS GCA 72 bp TGTAGGGTGATGTTACTGGAGAGAGCCTCAGAGCATTaGCTGCCAAGCCCGCTATGTTGTTTAAGCTTCGGG +
Preference number: 6 (lower is better)
Translates to: CRVMLLERASEH*LPSPLCCLSFG
Trigger: CCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGGCTCTCTCCAGTAACATCACCCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540018.5
ENST00000549446.6
CDS CCA 72 bp AAGCACAGGGCTCAGGAAAGAGTGGGTGGGTGGGTCTaGAGAAGCTATGTGTACCAACCAGGTTCACATATT +
Preference number: 6 (lower is better)
Translates to: KHRAQERVGGWV*RSYVYQPGSHI
Trigger: AATATGTGAACCTGGTTGGTACACATAGCTTCTCCAGACCCACCCACCCACTCTTTCCTGAGCCCTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549446.6
ENST00000647764.1
CDS CAA 90 bp AGAGCGTCTGATGGGGAGCCTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: RASDGEPDLLCSRSR*SLPRHVSLCVLLQA
Trigger: GGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGCTCCCCATCAGACGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548243.1
CDS GCA 72 bp AGACATGACTTAACGAGACCGAGAGAAAAGTGGTTCTaGTTTGGTTTCCGAGTGGACGAGGTTCTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: RHDLTRPREKWF*FGFRVDEVLWA
Trigger: TGCCCAGAGAACCTCGTCCACTCGGAAACCAAAGCAGAACCACTTTTCTCTCGGTCTCGTTAAGTCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000549446.6
ENST00000647764.1
CDS CAA 90 bp GTTACTGGAGAGAGCCTCAGAGCATTGCCTGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTTTCATATCCTTTCCTGATCCCTCCA +
Preference number: 6 (lower is better)
Translates to: VTGESLRALPAKPAM*FKLRDFSYPFLIPP
Trigger: TGGAGGGATCAGGAAAGGATATGAAAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGGCTCTCTCCAGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS TCA 72 bp TCACCCTCTCGTTGTTCTCGATCTTGCCCATCTCTGTaGCTCAGACATGACTTAACGAGACCGAGAGAAAAG +
Preference number: 6 (lower is better)
Translates to: SPSRCSRSCPSL*LRHDLTRPREK
Trigger: CTTTTCTCTCGGTCTCGTTAAGTCATGTCTGAGTCACAGAGATGGGCAAGATCGAGAACAACGAGAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000549446.6
ENST00000647764.1
CDS CCA 72 bp ACTGATGCAGTTTGGTTGTTTGGTTTACAAGATAGATaGGATGGGAGATCGAGAGCGCCTCAGAGGACAAGG +
Preference number: 6 (lower is better)
Translates to: TDAVWLFGLQDR*DGRSRAPQRTR
Trigger: CCTTGTCCTCTGAGGCGCTCTCGATCTCCCATCCCATCTATCTTGTAAACCAAACAACCAAACTGCATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540018.5
ENST00000549446.6
CDS CAA 72 bp GAGAGCCTCAGAGCATTGCCTGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTTTCATATCCTGATCTG +
Preference number: 6 (lower is better)
Translates to: ESLRALPAKPAM*FKLRDFSYPDL
Trigger: CAGATCAGGATATGAAAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGGCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540018.5
CDS CAA 72 bp GAGAGCCTCAGAGCATTGCCTGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTTTCATATCCTTTCCTG +
Preference number: 6 (lower is better)
Translates to: ESLRALPAKPAM*FKLRDFSYPFL
Trigger: CAGGAAAGGATATGAAAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGGCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549446.6
CDS CAA 90 bp CTGTCGTCACCTGATAACACTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: LSSPDNTDLLCSRSR*SLPRHVSLCVLLQA
Trigger: GGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGGTGACGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000393288.2
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
CDS CAA 90 bp GTTACTGGAGAGAGCCTCAGAGCATTGCCTGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTTTCATATCCTGATCTGTTATGTTCC +
Preference number: 6 (lower is better)
Translates to: VTGESLRALPAKPAM*FKLRDFSYPDLLCS
Trigger: GGAACATAACAGATCAGGATATGAAAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGGCTCTCTCCAGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540018.5
CDS CAA 90 bp CCATGTGGCAGAGGTAAAACTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: PCGRGKTDLLCSRSR*SLPRHVSLCVLLQA
Trigger: GGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTTTTACCTCTGCCACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS CAA 72 bp GATGGGGAGCCTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTA +
Preference number: 6 (lower is better)
Translates to: DGEPDLLCSRSR*SLPRHVSLCVL
Trigger: TAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGCTCCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548243.1
CDS CAA 90 bp TCTGATGGGGAGCCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTT +
Preference number: 6 (lower is better)
Translates to: SDGEPDLLCSRSRLS*PRHVSLCVLLQAIF
Trigger: AAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGCTCCCCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548243.1
CDS GCA 72 bp AGCCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGG +
Preference number: 6 (lower is better)
Translates to: SLICYVPEVDCL*PDMCHSVYYCR
Trigger: CCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548243.1
CDS CAA 72 bp GAGCCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAG +
Preference number: 6 (lower is better)
Translates to: EPDLLCSRSRLS*PRHVSLCVLLQ
Trigger: CTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548243.1
CDS CAA 90 bp ACAACCTCTTTGCAGTTATCTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: TTSLQLSDLLCSRSR*SLPRHVSLCVLLQA
Trigger: GGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGATAACTGCAAAGAGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350228.6
CDS CAA 90 bp CTTCGGGATTTTTCATATCCTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: LRDFSYPDLLCSRSR*SLPRHVSLCVLLQA
Trigger: GGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGATATGAAAAATCCCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540018.5
CDS GCA 72 bp ACACTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGG +
Preference number: 6 (lower is better)
Translates to: TLICYVPEVDCL*PDMCHSVYYCR
Trigger: CCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000393288.2
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
CDS GCA 72 bp ATCCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGG +
Preference number: 6 (lower is better)
Translates to: ILICYVPEVDCL*PDMCHSVYYCR
Trigger: CCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540018.5
CDS CAA 90 bp GCACTTGAATTAATACAATTTAGCCGACTGATGCAGTTTGGTTGTTaGGTTTACAAGATAGATGGGATGGGAGATCGAGAGCGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: ALELIQFSRLMQFGC*VYKIDGMGDRERLR
Trigger: TCTGAGGCGCTCTCGATCTCCCATCCCATCTATCTTGTAAACCAAACAACCAAACTGCATCAGTCGGCTAAATTGTATTAATTCAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540018.5
ENST00000549446.6
CDS CAA 90 bp GGCAGAGGTAAAACTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTT +
Preference number: 6 (lower is better)
Translates to: GRGKTDLLCSRSRLS*PRHVSLCVLLQAIF
Trigger: AAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTTTTACCTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS TCA 72 bp TTTAATTCTGTCTTGCAAAAAGTAGGTGAGCTTGCCTaGGGAGCAGGAGGGATGTGCTTCTTTCTTTTCCTT +
Preference number: 6 (lower is better)
Translates to: FNSVLQKVGELA*GAGGMCFFLFL
Trigger: AAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548243.1
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS GCA 72 bp TATCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGG +
Preference number: 6 (lower is better)
Translates to: YLICYVPEVDCL*PDMCHSVYYCR
Trigger: CCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350228.6
CDS GCA 72 bp AAACTGATCTGTTATGTTCCAGAAGTCGATTGTCTTTaGCCAGACATGTGTCACTCTGTGTACTATTGCAGG +
Preference number: 6 (lower is better)
Translates to: KLICYVPEVDCL*PDMCHSVYYCR
Trigger: CCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS CAA 72 bp AACACTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAG +
Preference number: 6 (lower is better)
Translates to: NTDLLCSRSRLS*PRHVSLCVLLQ
Trigger: CTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000393288.2
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
CDS CAA 72 bp CCTGATAACACTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTA +
Preference number: 6 (lower is better)
Translates to: PDNTDLLCSRSR*SLPRHVSLCVL
Trigger: TAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000393288.2
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
CDS CAA 72 bp TATCCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAG +
Preference number: 6 (lower is better)
Translates to: YPDLLCSRSRLS*PRHVSLCVLLQ
Trigger: CTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540018.5
CDS CAA 90 bp TCACCTGATAACACTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTT +
Preference number: 6 (lower is better)
Translates to: SPDNTDLLCSRSRLS*PRHVSLCVLLQAIF
Trigger: AAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298972.5
ENST00000393288.2
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
CDS TCA 72 bp AAAGGTCAAAGCGTTCAAATCTTCCTGCATGAAACTTaGTCTTCTGTGTTCAGGGTTTGGTTCTGTATGTGC +
Preference number: 6 (lower is better)
Translates to: KGQSVQIFLHET*SSVFRVWFCMC
Trigger: GCACATACAGAACCAAACCCTGAACACAGAAGATCAAGTTTCATGCAGGAAGATTTGAACGCTTTGACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546456.1
CDS CAA 72 bp TTATCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAG +
Preference number: 6 (lower is better)
Translates to: LSDLLCSRSRLS*PRHVSLCVLLQ
Trigger: CTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350228.6
CDS CAA 72 bp TTGCAGTTATCTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTA +
Preference number: 6 (lower is better)
Translates to: LQLSDLLCSRSR*SLPRHVSLCVL
Trigger: TAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGATAACTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350228.6
CDS CAA 72 bp AAAACTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAG +
Preference number: 6 (lower is better)
Translates to: KTDLLCSRSRLS*PRHVSLCVLLQ
Trigger: CTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS CAA 72 bp AGAGGTAAAACTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTA +
Preference number: 6 (lower is better)
Translates to: RGKTDLLCSRSR*SLPRHVSLCVL
Trigger: TAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTTTTACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS CAA 90 bp AGAAGTCGATTGTCTTTGCCCAGACATGTGTCACTCTGTGTACTATaGCAGGCCATATTTAATTCTGTCTTGCAAAAAGTAGGTGAGCTT +
Preference number: 6 (lower is better)
Translates to: RSRLSLPRHVSLCVL*QAIFNSVLQKVGEL
Trigger: AAGCTCACCTACTTTTTGCAAGACAGAATTAAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000548243.1
ENST00000548513.5
ENST00000549446.6
ENST00000550433.5
ENST00000647764.1
CDS CAA 90 bp TCTTTGCAGTTATCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTT +
Preference number: 6 (lower is better)
Translates to: SLQLSDLLCSRSRLS*PRHVSLCVLLQAIF
Trigger: AAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGATAACTGCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350228.6
CDS CAA 90 bp GATTTTTCATATCCTGATCTGTTATGTTCCAGAAGTCGATTGTCTTaGCCCAGACATGTGTCACTCTGTGTACTATTGCAGGCCATATTT +
Preference number: 6 (lower is better)
Translates to: DFSYPDLLCSRSRLS*PRHVSLCVLLQAIF
Trigger: AAATATGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGATATGAAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540018.5
CDS TCA 72 bp TGTAAGCATCCATTCTTCTTAAATAACTGCTTCTTGTaGATTAGGTTGAGATGCATGGCACCATGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: CKHPFFLNNCFL*IRLRCMAPCGR
Trigger: TCTGCCACATGGTGCCATGCATCTCAACCTAATTCACAAGAAGCAGTTATTTAAGAAGAATGGATGCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647764.1
CDS CAA 72 bp TTTTCATATCCTGATCTGTTATGTTCCAGAAGTCGATaGTCTTTGCCCAGACATGTGTCACTCTGTGTACTA +
Preference number: 6 (lower is better)
Translates to: FSYPDLLCSRSR*SLPRHVSLCVL
Trigger: TAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGATATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540018.5
CDS CAA 72 bp TTAATACAATTTAGCCGACTGATGCAGTTTGGTTGTTaGGTTTACAAGATAGATGGGATGGGAGATCGAGAG +
Preference number: 6 (lower is better)
Translates to: LIQFSRLMQFGC*VYKIDGMGDRE
Trigger: CTCTCGATCTCCCATCCCATCTATCTTGTAAACCAAACAACCAAACTGCATCAGTCGGCTAAATTGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540018.5
ENST00000549446.6
CDS CAA 90 bp ACACTTGTGCCATTGATGACTGGTTCTGTCTTGTTTTTAACAATATaGAAAGCTTCATGTGTTTCCAGGCAAAAAGTTGTAATTGAAACC +
Preference number: 6 (lower is better)
Translates to: TLVPLMTGSVLFLTI*KASCVSRQKVVIET
Trigger: GGTTTCAATTACAACTTTTTGCCTGGAAACACATGAAGCTTTCAATATTGTTAAAAACAAGACAGAACCAGTCATCAATGGCACAAGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298972.5
ENST00000350228.6
ENST00000393288.2
ENST00000540018.5
ENST00000546456.1
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